View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18068_low_58 (Length: 361)

Name: NF18068_low_58
Description: NF18068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18068_low_58
NF18068_low_58
[»] chr7 (33 HSPs)
chr7 (169-351)||(19305906-19306088)
chr7 (179-351)||(32523212-32523384)
chr7 (157-351)||(28408230-28408425)
chr7 (169-351)||(32177856-32178038)
chr7 (169-338)||(2933444-2933613)
chr7 (178-346)||(37453234-37453402)
chr7 (181-351)||(8437467-8437638)
chr7 (169-343)||(49113863-49114037)
chr7 (179-351)||(45746886-45747058)
chr7 (169-351)||(7417512-7417695)
chr7 (169-344)||(32832235-32832411)
chr7 (235-351)||(29226337-29226452)
chr7 (169-351)||(1511349-1511531)
chr7 (238-351)||(44307688-44307800)
chr7 (178-264)||(32523452-32523538)
chr7 (155-264)||(28408491-28408599)
chr7 (169-264)||(8437306-8437401)
chr7 (178-264)||(32178104-32178190)
chr7 (169-351)||(10878626-10878809)
chr7 (178-264)||(2933296-2933382)
chr7 (169-264)||(7417762-7417856)
chr7 (178-264)||(32832483-32832569)
chr7 (169-286)||(31894259-31894374)
chr7 (169-226)||(19305741-19305798)
chr7 (179-264)||(24986729-24986814)
chr7 (169-226)||(49114150-49114207)
chr7 (239-291)||(27612277-27612329)
chr7 (241-351)||(30060566-30060675)
chr7 (169-225)||(44307612-44307668)
chr7 (169-264)||(1511191-1511285)
chr7 (169-264)||(31894505-31894599)
chr7 (193-226)||(37452478-37452511)
chr7 (235-264)||(37453145-37453174)
[»] chr5 (37 HSPs)
chr5 (169-351)||(18485822-18486004)
chr5 (155-351)||(40833923-40834119)
chr5 (169-351)||(13600608-13600790)
chr5 (169-351)||(32936368-32936550)
chr5 (169-349)||(2094737-2094917)
chr5 (169-351)||(7145534-7145721)
chr5 (169-351)||(20769713-20769895)
chr5 (179-351)||(3539759-3539930)
chr5 (169-351)||(30370673-30370855)
chr5 (169-351)||(35363146-35363334)
chr5 (160-335)||(27843015-27843189)
chr5 (169-351)||(35362080-35362262)
chr5 (169-351)||(132211-132391)
chr5 (169-284)||(19558102-19558217)
chr5 (169-264)||(32936207-32936302)
chr5 (169-264)||(35362985-35363080)
chr5 (169-351)||(15178952-15179134)
chr5 (169-264)||(18485660-18485755)
chr5 (169-264)||(40834185-40834280)
chr5 (169-264)||(2094576-2094671)
chr5 (169-264)||(30370512-30370607)
chr5 (181-289)||(7145762-7145871)
chr5 (241-288)||(3294396-3294443)
chr5 (240-291)||(14274308-14274359)
chr5 (178-289)||(20769935-20770048)
chr5 (169-289)||(13600445-13600568)
chr5 (185-351)||(25363033-25363198)
chr5 (169-351)||(32994309-32994499)
chr5 (164-226)||(20339152-20339214)
chr5 (187-291)||(38981783-38981887)
chr5 (240-291)||(33568984-33569035)
chr5 (241-284)||(42858555-42858598)
chr5 (179-264)||(3539608-3539694)
chr5 (169-219)||(37093738-37093788)
chr5 (159-225)||(32458075-32458142)
chr5 (156-225)||(3294584-3294654)
chr5 (240-285)||(27342885-27342930)
[»] chr2 (32 HSPs)
chr2 (169-351)||(2318494-2318675)
chr2 (169-352)||(9319964-9320147)
chr2 (169-351)||(18916626-18916808)
chr2 (169-351)||(20364133-20364315)
chr2 (169-349)||(17846009-17846189)
chr2 (169-351)||(10044746-10044928)
chr2 (178-351)||(44536346-44536520)
chr2 (169-351)||(10108814-10108997)
chr2 (178-343)||(4261163-4261328)
chr2 (169-351)||(27360120-27360304)
chr2 (169-351)||(601328-601512)
chr2 (178-264)||(9319812-9319898)
chr2 (169-264)||(27360371-27360466)
chr2 (181-287)||(8322411-8322515)
chr2 (179-264)||(17846257-17846342)
chr2 (169-351)||(30337425-30337607)
chr2 (181-264)||(18916874-18916957)
chr2 (169-264)||(20363971-20364066)
chr2 (169-264)||(2318740-2318834)
chr2 (178-291)||(13862503-13862615)
chr2 (169-289)||(4261376-4261500)
chr2 (239-285)||(37084688-37084734)
chr2 (169-226)||(601620-601677)
chr2 (183-289)||(10109038-10109146)
chr2 (178-225)||(5547339-5547386)
chr2 (156-226)||(44536166-44536237)
chr2 (241-291)||(9991921-9991971)
chr2 (253-291)||(41385779-41385817)
chr2 (241-282)||(10520866-10520907)
chr2 (246-291)||(43520394-43520439)
chr2 (241-338)||(31769961-31770057)
chr2 (169-225)||(18178377-18178433)
[»] chr1 (30 HSPs)
chr1 (171-351)||(40902490-40902670)
chr1 (169-351)||(1549328-1549510)
chr1 (155-351)||(2026708-2026904)
chr1 (169-351)||(17985451-17985632)
chr1 (169-351)||(30562785-30562966)
chr1 (181-351)||(17611587-17611757)
chr1 (170-351)||(30002372-30002552)
chr1 (178-351)||(25780052-25780224)
chr1 (169-351)||(12139025-12139207)
chr1 (169-351)||(7114026-7114207)
chr1 (178-264)||(17985297-17985383)
chr1 (169-264)||(17611426-17611521)
chr1 (169-264)||(40902328-40902423)
chr1 (169-264)||(2026969-2027064)
chr1 (238-351)||(12115024-12115136)
chr1 (178-264)||(30002221-30002307)
chr1 (169-263)||(7113866-7113960)
chr1 (164-264)||(12115201-12115301)
chr1 (169-264)||(12139273-12139369)
chr1 (191-351)||(4969387-4969548)
chr1 (238-351)||(19897340-19897452)
chr1 (169-264)||(30563032-30563128)
chr1 (180-226)||(29233699-29233745)
chr1 (179-264)||(19897187-19897272)
chr1 (178-226)||(25779895-25779943)
chr1 (239-291)||(47193951-47194003)
chr1 (183-226)||(34480440-34480483)
chr1 (240-290)||(30306852-30306902)
chr1 (241-287)||(44066951-44066997)
chr1 (169-226)||(49564186-49564243)
[»] chr4 (57 HSPs)
chr4 (169-351)||(13294603-13294786)
chr4 (178-351)||(50161279-50161452)
chr4 (171-351)||(5260197-5260376)
chr4 (169-351)||(23163442-23163624)
chr4 (169-351)||(48419379-48419561)
chr4 (169-351)||(49621440-49621622)
chr4 (169-351)||(9525971-9526153)
chr4 (169-351)||(33692263-33692445)
chr4 (169-351)||(21707765-21707947)
chr4 (169-351)||(28458684-28458866)
chr4 (169-349)||(21053460-21053640)
chr4 (181-351)||(3546501-3546672)
chr4 (169-351)||(26202523-26202705)
chr4 (169-351)||(42856964-42857146)
chr4 (169-351)||(46143434-46143615)
chr4 (169-351)||(20931139-20931322)
chr4 (169-351)||(33369510-33369695)
chr4 (169-343)||(52690266-52690442)
chr4 (169-351)||(41689390-41689575)
chr4 (169-351)||(55140199-55140379)
chr4 (169-349)||(37872768-37872944)
chr4 (235-351)||(23549660-23549776)
chr4 (178-289)||(33369735-33369847)
chr4 (169-264)||(13294852-13294947)
chr4 (169-264)||(23163282-23163377)
chr4 (169-264)||(49621687-49621782)
chr4 (169-351)||(25297681-25297865)
chr4 (299-351)||(55742739-55742791)
chr4 (169-264)||(20930976-20931071)
chr4 (178-264)||(50161125-50161213)
chr4 (169-351)||(2685986-2686162)
chr4 (238-351)||(30799391-30799503)
chr4 (158-289)||(42856794-42856925)
chr4 (181-264)||(37873012-37873095)
chr4 (169-264)||(46143273-46143368)
chr4 (169-289)||(9525806-9525930)
chr4 (178-289)||(28458531-28458644)
chr4 (169-289)||(3546712-3546835)
chr4 (169-351)||(30055209-30055393)
chr4 (242-338)||(50977627-50977723)
chr4 (169-264)||(55742857-55742952)
chr4 (169-264)||(33692512-33692606)
chr4 (169-264)||(52690097-52690191)
chr4 (178-226)||(30799302-30799350)
chr4 (181-264)||(5260442-5260525)
chr4 (239-338)||(22335505-22335602)
chr4 (167-226)||(30799611-30799670)
chr4 (181-264)||(21707616-21707698)
chr4 (178-264)||(41689641-41689727)
chr4 (169-222)||(55742622-55742675)
chr4 (240-284)||(53232328-53232372)
chr4 (169-225)||(55140485-55140541)
chr4 (178-225)||(25297969-25298016)
chr4 (179-225)||(9851907-9851953)
chr4 (169-223)||(30055494-30055548)
chr4 (235-264)||(21053365-21053394)
chr4 (239-291)||(17872388-17872440)
[»] chr3 (45 HSPs)
chr3 (169-351)||(8851967-8852150)
chr3 (169-349)||(22316721-22316901)
chr3 (169-351)||(37513092-37513274)
chr3 (178-351)||(36229773-36229946)
chr3 (169-351)||(55009100-55009280)
chr3 (192-351)||(49621002-49621161)
chr3 (169-349)||(22975346-22975526)
chr3 (179-351)||(25847456-25847628)
chr3 (190-348)||(49984876-49985034)
chr3 (169-351)||(28829754-28829935)
chr3 (168-351)||(48433965-48434148)
chr3 (169-351)||(23043352-23043534)
chr3 (169-344)||(11121284-11121459)
chr3 (245-348)||(9296547-9296650)
chr3 (165-351)||(49711562-49711747)
chr3 (178-351)||(44506056-44506229)
chr3 (161-264)||(8851797-8851900)
chr3 (169-264)||(37513340-37513435)
chr3 (169-289)||(25847668-25847789)
chr3 (169-264)||(22316969-22317064)
chr3 (161-264)||(11121531-11121635)
chr3 (169-351)||(17574374-17574553)
chr3 (169-264)||(49621228-49621323)
chr3 (178-264)||(22975594-22975680)
chr3 (169-226)||(33491692-33491749)
chr3 (178-226)||(55009386-55009434)
chr3 (241-351)||(3612759-3612870)
chr3 (178-264)||(36230012-36230099)
chr3 (169-264)||(28830001-28830097)
chr3 (164-264)||(49711397-49711496)
chr3 (178-225)||(9296393-9296440)
chr3 (180-264)||(48433810-48433896)
chr3 (239-291)||(35850872-35850924)
chr3 (187-291)||(45279477-45279581)
chr3 (169-264)||(44506293-44506388)
chr3 (239-284)||(1341957-1342002)
chr3 (241-290)||(12012782-12012831)
chr3 (169-226)||(33491603-33491660)
chr3 (178-226)||(10687880-10687928)
chr3 (178-225)||(3612605-3612652)
chr3 (241-283)||(43006987-43007029)
chr3 (190-226)||(1342180-1342216)
chr3 (247-291)||(7603616-7603660)
chr3 (190-226)||(7603683-7603719)
chr3 (178-226)||(23043193-23043241)
[»] chr6 (17 HSPs)
chr6 (155-351)||(3218304-3218499)
chr6 (169-351)||(3922701-3922883)
chr6 (167-351)||(33595318-33595502)
chr6 (169-351)||(4242924-4243106)
chr6 (165-346)||(14763315-14763496)
chr6 (169-351)||(23068860-23069040)
chr6 (235-351)||(6754984-6755100)
chr6 (169-264)||(23068697-23068792)
chr6 (169-264)||(33595569-33595664)
chr6 (168-264)||(3218151-3218247)
chr6 (169-264)||(4243172-4243267)
chr6 (169-264)||(6755166-6755261)
chr6 (169-263)||(3922540-3922634)
chr6 (161-345)||(10810145-10810328)
chr6 (169-264)||(14763555-14763652)
chr6 (239-283)||(20491722-20491766)
chr6 (241-291)||(7808874-7808923)
[»] chr8 (35 HSPs)
chr8 (160-351)||(30904523-30904713)
chr8 (169-351)||(2967871-2968054)
chr8 (169-351)||(27912096-27912279)
chr8 (169-351)||(27958515-27958698)
chr8 (169-351)||(35482703-35482885)
chr8 (178-351)||(17875778-17875951)
chr8 (178-351)||(10682222-10682396)
chr8 (178-351)||(17844045-17844216)
chr8 (169-351)||(44379523-44379705)
chr8 (180-351)||(13327425-13327598)
chr8 (169-345)||(23792749-23792924)
chr8 (169-264)||(2968119-2968214)
chr8 (238-351)||(20223176-20223288)
chr8 (161-264)||(27912347-27912450)
chr8 (161-264)||(27958766-27958869)
chr8 (179-351)||(4128752-4128924)
chr8 (169-264)||(17876019-17876114)
chr8 (169-351)||(30928476-30928657)
chr8 (169-264)||(35482951-35483046)
chr8 (169-351)||(3691583-3691766)
chr8 (239-291)||(38464711-38464763)
chr8 (169-264)||(30904362-30904457)
chr8 (169-351)||(27523118-27523299)
chr8 (238-351)||(42123864-42123977)
chr8 (169-264)||(10682062-10682156)
chr8 (169-264)||(14577113-14577210)
chr8 (238-351)||(7899830-7899943)
chr8 (169-225)||(20178372-20178428)
chr8 (169-225)||(20223100-20223156)
chr8 (241-284)||(31231317-31231360)
chr8 (194-264)||(38464887-38464957)
chr8 (183-226)||(42685044-42685087)
chr8 (313-351)||(14577010-14577048)
chr8 (169-225)||(13327263-13327319)
chr8 (178-226)||(17843890-17843938)
[»] scaffold0029 (2 HSPs)
scaffold0029 (163-350)||(137079-137264)
scaffold0029 (169-264)||(136917-137012)
[»] scaffold0002 (2 HSPs)
scaffold0002 (163-350)||(330360-330545)
scaffold0002 (169-264)||(330198-330293)
[»] scaffold0311 (2 HSPs)
scaffold0311 (206-351)||(12635-12780)
scaffold0311 (163-264)||(12846-12947)
[»] scaffold1577 (1 HSPs)
scaffold1577 (161-351)||(1035-1224)
[»] scaffold0347 (1 HSPs)
scaffold0347 (169-224)||(12223-12278)
[»] scaffold0053 (1 HSPs)
scaffold0053 (240-287)||(15263-15310)


Alignment Details
Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 19306088 - 19305906
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  19306088 gcaaaatagcacaattagtcccttaactttattttagttaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 19305989  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19305988 atatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttatgtttgcctatg 19305906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 179 - 351
Target Start/End: Original strand, 32523212 - 32523384
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatc 278  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||||||    
T  32523212 acaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatc 32523311  T
Q  279 attttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32523312 attttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 32523384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 157 - 351
Target Start/End: Original strand, 28408230 - 28408425
Alignment:
Q  157 aaataaaattaag-caaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatg 255  Q
    ||||||||||| | ||||||  ||||||||| | ||||||||||||||| |||||||||||||||||||||        |||| ||||||||||||||||    
T  28408230 aaataaaattatgacaaaattacacaattagccccttaactttattttaggtaacactttcgtcctttatcttttttttgtcatgatttagtcctttatg 28408329  T
Q  256 ttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||| ||||||||||||||||||||||||       ||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  28408330 ttataaaatgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatg 28408425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 32177856 - 32178038
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  |||||||||||  |||||||||||||| |||||| ||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  32177856 gcaaaattacacaattagtcctttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 32177955  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  32177956 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcctatg 32178038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 169 - 338
Target Start/End: Complemental strand, 2933613 - 2933444
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||| |    
T  2933613 gcaaaatagcacaattagttccttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaatgaaa 2933514  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagattt 338  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||    
T  2933513 atatcttatcattttttatgagattcttttcaaagaaatttgattttctatgcttgtatgatgaaaattt 2933444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 178 - 346
Target Start/End: Complemental strand, 37453402 - 37453234
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||||||        |||||| ||||||||||||||||||||||||| ||||||||||    
T  37453402 cacaatcagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacggtttagtcctttatgttataaaatgacaatatcttat 37453303  T
Q  278 cattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgc 346  Q
    |||||||||||| |       |||||||||||||||||||| |||||||||||||||||||||||||||    
T  37453302 cattttttatgaaatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 37453234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 181 - 351
Target Start/End: Complemental strand, 8437638 - 8437467
Alignment:
Q  181 aattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgataatatcttatca 279  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||||||||  ||||||||||||    
T  8437638 aattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgccaatatcttatca 8437539  T
Q  280 ttttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||       ||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  8437538 ttttttatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcctatg 8437467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 169 - 343
Target Start/End: Original strand, 49113863 - 49114037
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  |||||||||||  |||||||||||||| |||||||||||||||||||||        || ||||||||||||||||||||||||||||| |    
T  49113863 gcaaaattacacaattagtcctttaactttattttaggtaacactttcgtcctttatcttttttttgttacgatttagtcctttatgttataaaatgaca 49113962  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtt 343  Q
    |||||||||||||||||||||||       |||||||||||||||||| | ||||||||||||||||||||||||    
T  49113963 atatcttatcattttttatgagatttttttcaaagaaatttgattttccaggcttgtatgatgaagatttacgtt 49114037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 179 - 351
Target Start/End: Complemental strand, 45747058 - 45746886
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatc 278  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||        |||||||||||||| ||||||||||||||||| |||||||||||    
T  45747058 acaattagtttcttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtc-tttatgttataaaatgacaatatcttatc 45746960  T
Q  279 attttttatgagannnnnnn-caaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||        |||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  45746959 attttttatgagattttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcgtttgcctatg 45746886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 7417512 - 7417695
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||  |||||||| || ||||||||||||||| |||||| ||||||||||||||         ||||||||||||||||||||||||||||||||     
T  7417512 gcaaaattacacaattaatcccttaactttattttaggtaacattttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgac 7417611  T
Q  268 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||| |||||||        |||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  7417612 aatatcttatcattttgtatgagattttttttaaagaaatttgattttctagacttgtatgatgaagatttgcgtttgcctatg 7417695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 32832235 - 32832411
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    ||||||||  |||||||||| ||||| ||||||||| ||||||||||  || ||||||        ||||| |||||||||||||||||||||||||| |    
T  32832235 gcaaaataatacaattagtcccttaattttattttaggtaacacttttatcttttatcttttttttgtcacaatttagtcctttatgttataaaatgaca 32832334  T
Q  269 atatcttatcattttttatgaga-nnnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgttt 344  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32832335 atatcttatcattttttatgagattttttttcaaagaaatttgattttctatgcttgtatgatgaaaatttacgttt 32832411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 29226337 - 29226452
Alignment:
Q  235 gtcacgatttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaag 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||   |||||| ||||||    
T  29226337 gtcacgatttagtcctttatgttataaaatgataatatcttatcattttttatgag-tttttttcaatgaaatttgattttctaaaattgtataatgaag 29226435  T
Q  335 atttacgtttgcctatg 351  Q
    |||| |||||| |||||    
T  29226436 atttgcgtttgtctatg 29226452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 1511531 - 1511349
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| |||||||| | |||| |||||||||||||||||||||        || ||||||||||||||||||||||||||||| |    
T  1511531 gcaaaattacacaattagtcccttaacttaaatttaggtaacactttcgtcctttatcttttttt-gtaacgatttagtcctttatgttataaaatgaca 1511433  T
Q  269 atatcttatcatt--ttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||| ||||||||  ||||||||||       ||| |||||||||||||||| | | |||||||||||||||||||||| |||||    
T  1511432 ctattttatcattttttttatgaga-ttttttcaatgaaatttgattttctaggttagtatgatgaagatttacgtttgtctatg 1511349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 44307688 - 44307800
Alignment:
Q  238 acgatttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatt 337  Q
    ||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||       ||| |||||||||||||||| ||| ||||||||||||||    
T  44307688 acgatttagtcctttatattataaaatgacactattttatcattttttatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatt 44307786  T
Q  338 tacgtttgcctatg 351  Q
    |||||||| |||||    
T  44307787 tacgtttgtctatg 44307800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 32523538 - 32523452
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  32523538 cacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttatttgtcacgatttagtcctttatgttataaaat 32523452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 264
Target Start/End: Complemental strand, 28408599 - 28408491
Alignment:
Q  155 ataaataaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttat 254  Q
    ||||||||  ||| |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||    
T  28408599 ataaataattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-tttttttgtcacgatttagtcctttat 28408501  T
Q  255 gttataaaat 264  Q
    ||||||||||    
T  28408500 gttataaaat 28408491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 8437306 - 8437401
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||| |||||||||||||||||||||||||    
T  8437306 gcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatcttttttctgtcatgatttagtcctttatgttataaaat 8437401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 32178190 - 32178104
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||||        ||||||||||||||||||||||||||||||    
T  32178190 cacaattagtcccttaactttattttaggtaacacttttgtcctttatctttcttttgtcacgatttagtcctttatgttataaaat 32178104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 10878626 - 10878809
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc--nnnnnnnngtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  ||||||||||| |||||||| |||||| |||||||||||||||||||||          || |||||||||||||||||||||||||||||    
T  10878626 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatcttttttttttgtaacgatttagtcctttatgttataaaatga 10878725  T
Q  267 taatatcttatca-ttttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     | ||| |||||| ||||||||||||       ||| ||||||||| |||||| ||| ||||||||| ||||| |||||| |||||    
T  10878726 cactattttatcatttttttatgaga-ttttttcaatgaaatttga-tttctaggctagtatgatgacgatttgcgtttgtctatg 10878809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 2933296 - 2933382
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||         |||||||||||||||||||||||||||||    
T  2933296 cacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttatcacgatttagtcctttatgttataaaat 2933382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 7417856 - 7417762
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  7417856 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-tttttttgtcacgatttagtcctttttgttataaaat 7417762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 32832569 - 32832483
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||||||    
T  32832569 cacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttatcacgatttagtcctttatgttataaaat 32832483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 286
Target Start/End: Original strand, 31894259 - 31894374
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||| ||||| |||||||| |||||| ||||||||||||||||||||         || ||||||||||||||||||||||||||||| |    
T  31894259 gcaaaattacacaaatagtcccttaacttaattttaggtaacactttcgtcctttat--tttttttgtaacgatttagtcctttatgttataaaatgaca 31894356  T
Q  269 atatcttatcatttttta 286  Q
     ||| |||||||||||||    
T  31894357 ctattttatcatttttta 31894374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 19305741 - 19305798
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  19305741 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 19305798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 24986729 - 24986814
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||  |||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  24986729 acaattagtcctttaattttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaat 24986814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 49114207 - 49114150
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  49114207 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 49114150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 27612329 - 27612277
Alignment:
Q  239 cgatttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    |||||||||| | ||||||||||||||| ||||||||||||||||| ||||||    
T  27612329 cgatttagtcttatatgttataaaatgacaatatcttatcatttttaatgaga 27612277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 30060675 - 30060566
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttac 340  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||| ||||       ||| |||||  |||||||| || |||||||||||||||||      
T  30060675 atttagtcctttatgttatgaaatgacaatattttatcattttttaagaga-ttttttcaatgaaatcggattttctttgtttgtatgatgaagatttgg 30060577  T
Q  341 gtttgcctatg 351  Q
    |||||| ||||    
T  30060576 gtttgcttatg 30060566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 44307612 - 44307668
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    |||||||  ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  44307612 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 44307668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 1511191 - 1511285
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| |||||||| |||||| |||| | |||||||||||||         || |||||||||||||||||||||||||||    
T  1511191 gcaaaattacacaattagtcccttaacttaattttaggtaatattttcgtcctttat-ttttttttgtaacgatttagtcctttatgttataaaat 1511285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 31894599 - 31894505
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| |||||||| ||||||  ||||| |||||||||||||         || |||||||||||||||||||||||||||    
T  31894599 gcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttat-ttttttttgtaacgatttagtcctttatgttataaaat 31894505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 37452478 - 37452511
Alignment:
Q  193 aactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||||||| |||||||||||||||||||||    
T  37452478 aactttattttaggtaacactttcgtcctttatc 37452511  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 264
Target Start/End: Original strand, 37453145 - 37453174
Alignment:
Q  235 gtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||||||||||||||||||||||    
T  37453145 gtcacgatttagtcctttatgttataaaat 37453174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 4e-60; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 18486004 - 18485822
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||| ||||||||||| |    
T  18486004 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatcttataaaatgaca 18485905  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18485904 atatcttatcattttttatgagatttttttcaaagaaatttaattttctatgcttgtatgatgaagatttacgtttgcctatg 18485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 155 - 351
Target Start/End: Original strand, 40833923 - 40834119
Alignment:
Q  155 ataaataaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttat 254  Q
    ||||| ||||| | |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||    
T  40833923 ataaaaaaaataaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttat 40834022  T
Q  255 gttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40834023 gttataaaatgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 40834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 13600790 - 13600608
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  |||||||||||||||||||||||| || |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  13600790 gcaaaattacacaattagtctcttaactttattgtaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgata 13600691  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  13600690 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgataaagatttgcgtttgcctatg 13600608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 32936550 - 32936368
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  32936550 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 32936451  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  32936450 atatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatg 32936368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 169 - 349
Target Start/End: Complemental strand, 2094917 - 2094737
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| ||||||||||| |||||||||        |||||||||||||||||||| ||||||||||| |    
T  2094917 gcaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgtcacgatttagtcctttatattataaaatgaca 2094818  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgccta 349  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2094817 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgccta 2094737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 7145534 - 7145721
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-----gtcacgatttagtcctttatgttataaaa 263  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||             |||||||||||||||||||||||||||||    
T  7145534 gcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttttttgtcacgatttagtcctttatgttataaaa 7145633  T
Q  264 tgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7145634 tgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcatatg 7145721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 20769713 - 20769895
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||| ||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  20769713 gcaaaattacacaattagtcccttaactttattttaggtaatactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 20769812  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  20769813 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcctatg 20769895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 351
Target Start/End: Complemental strand, 3539930 - 3539759
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatc 278  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||| |||||||||||    
T  3539930 acaattagtctcataattttattttaggtaacactttcgtcctttat-ttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatc 3539832  T
Q  279 attttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||       |||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  3539831 attttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcctatg 3539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 30370855 - 30370673
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| | |||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  30370855 gcaaaattacacaattagtcccttaactttattttaggcaacactttcgtcctttatcttttttt-gtcacgatttagtcctttatgttataaaatgaca 30370757  T
Q  269 atatcttatcattttttatgaga-nnnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||||||||| |        ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30370756 atatcttatcattttttatgaaattttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctatg 30370673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 35363334 - 35363146
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  35363334 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttcttttttgtcacgatttagtcctttatgttataaaatgac 35363235  T
Q  268 aatatcttatcattttt-----tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||| ||||     |||||||       ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  35363234 aatatcttatcagttttaattttatgagatttttttcaaagaaatttgactttctaggcttgtatgatgaagatttacgtttgcctatg 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 27843015 - 27843189
Alignment:
Q  160 taaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttat 259  Q
    |||||||  |||||||  || |||||||| |||||||| |||||| |||||| ||||||||||||||        || ||||||||||| ||||||||||    
T  27843015 taaaatttggcaaaattacataattagtcccttaacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcttttatgttat 27843114  T
Q  260 aaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaaga 335  Q
    ||||||| ||||| ||||||||||||||||||       ||| |||||||||||||||| | ||||||||||||||    
T  27843115 aaaatgacaatattttatcattttttatgaga-tttttccaatgaaatttgattttctaggtttgtatgatgaaga 27843189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 35362262 - 35362080
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| |||||||| |||||| ||||| |||||||||||||||        || ||||||||||||||||||||||||||||| |    
T  35362262 gcaaaattacacaattagtcccttaacttaattttaggtaacgctttcgtcctttatcttttttctgtaacgatttagtcctttatgttataaaatgaca 35362163  T
Q  269 atatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||  ||||| |||||    
T  35362162 ctattttatcatttttgtatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatg 35362080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 132391 - 132211
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    ||||||| |||||||||||  |||||||||  |||| |||||||||||||||||||||        || ||||||||||||||||||||||||||||| |    
T  132391 gcaaaattgcacaattagttacttaacttt--tttaggtaacactttcgtcctttatcttttttctgtaacgatttagtcctttatgttataaaatgaca 132294  T
Q  269 atatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||  ||||| |||||    
T  132293 ctattttatcatttttgtatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatg 132211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 19558217 - 19558102
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| |||||||| |||||| |||||||||||||||||||||        || ||||||||||||||||||||||||||||| |    
T  19558217 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatcttttttctgtaacgatttagtcctttatgttataaaatgaca 19558118  T
Q  269 atatcttatcattttt 284  Q
     ||| |||||||||||    
T  19558117 ctattttatcattttt 19558102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 32936207 - 32936302
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  32936207 gcaaaattacacaattagtcacttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 32936302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 35362985 - 35363080
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  35362985 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcctttttttgtcacgatttagtcctttatgttataaaat 35363080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 15179134 - 15178952
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| |||||||| |||||| |||||||||||||||||||||         | ||||||||||||||||||||||||||||| |    
T  15179134 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatcttttttttttaacgatttagtcctttatgttataaaatgaca 15179035  T
Q  269 atatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||| ||||||||||| |||||||       ||| |||||||||||||||   || |||||||||||||||  ||||| |||||    
T  15179034 ctattttatcatttttgtatgaga-ttttttcaatgaaatttgattttcttgactagtatgatgaagatttgagtttgtctatg 15178952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 18485660 - 18485755
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||| ||||||||||||||||||||||||    
T  18485660 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttgttgtcacaatttagtcctttatgttataaaat 18485755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 40834280 - 40834185
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||| ||||||||||||||||||||||||    
T  40834280 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttctttgtcacaatttagtcctttatgttataaaat 40834185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 2094576 - 2094671
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  |||||||| || ||||||||||||||| |||||||||| ||||||||||        ||||||||||||||||||||||||||||||    
T  2094576 gcaaaattacacaattaatcccttaactttattttaggtaacactttggtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 2094671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 30370512 - 30370607
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||| ||||||        |||||||||||||| |||||||||||||||    
T  30370512 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcttttatcttttttttgtcacgatttagtcatttatgttataaaat 30370607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 7145871 - 7145762
Alignment:
Q  181 aattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatat-cttatca 279  Q
    ||||| || ||||||||||||||| |||||| ||||||||||||||        |||||||||||||||||||||||||||||| | || ||  ||||||    
T  7145871 aattaatcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataacaacatagttatca 7145772  T
Q  280 ttttttatga 289  Q
    ||||||||||    
T  7145771 ttttttatga 7145762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 3294396 - 3294443
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattttttatg 288  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3294396 atttagtcctttatgttataaaatgataatatcttattattttttatg 3294443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 14274308 - 14274359
Alignment:
Q  240 gatttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  14274308 gatttagtcctttatgttataaaatgacaatatcttattattttttatgaga 14274359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 20770048 - 20769935
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttataaaatgataatat-ctt 275  Q
    ||||||||||| |||||| |||||||| ||||||||| |||||||||||         |||||||||||||||||||||||||||||| | |||||  ||    
T  20770048 cacaattagtcccttaacattattttaggtaacacttccgtcctttatctttttttttgtcacgatttagtcctttatgttataaaataacaatatagtt 20769949  T
Q  276 atcattttttatga 289  Q
    ||| ||||||||||    
T  20769948 atccttttttatga 20769935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 13600445 - 13600568
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc--nnnnnnnngtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  |||||||||||  ||| |||||||||| |||||||||||||||||||||          |||||||||||||||||||||||||||||| |    
T  13600445 gcaaaattacacaattagtcctttacctttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctttatgttataaaataa 13600544  T
Q  267 taatat-cttatcattttttatga 289  Q
     || ||  ||||||||||||||||    
T  13600545 caacatagttatcattttttatga 13600568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 351
Target Start/End: Original strand, 25363033 - 25363198
Alignment:
Q  185 agtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatcattttt 284  Q
    |||| |||||||| |||||| |||||||||||||| ||||||        || ||||||||||||||||||||||||||||| | ||| |||||||||||    
T  25363033 agtcccttaacttaattttaggtaacactttcgtcatttatcttttttt-gtaacgatttagtcctttatgttataaaatgacactattttatcattttt 25363131  T
Q  285 -tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     | |||||       ||| |||||||||||||||   || ||||||||||||||| |||||| |||||    
T  25363132 gtttgaga-tttattcaatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatg 25363198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 32994499 - 32994309
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc--------nnnnnnnngtcacgatttagtcctttatgttata 260  Q
    |||||||  ||||||||||| |||||||| |||||| |||||||||||||||||||||                || |||||||||||||||||||||||    
T  32994499 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatcttttttttttttttttgtaacgatttagtcctttatgttata 32994400  T
Q  261 aaatgataatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||| | ||| ||||||||||| |||||||       ||| |||||||||||||||   || ||||||||||||||| |||||| |||||    
T  32994399 aaatgacactattttatcatttttgtatgaga-ttttttcaatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatg 32994309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 20339152 - 20339214
Alignment:
Q  164 attaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||| |||||||  |||||||| || ||||||||||||||| |||||||||||||||||||||    
T  20339152 attaggcaaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatc 20339214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 38981887 - 38981783
Alignment:
Q  187 tctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatcatttttta 286  Q
    |||||||| || |||||| ||||||||||||||||| |||         || ||||||||||| |||||||||||||||| || | ||||||| ||||||    
T  38981887 tctcttaatttaattttaggtaacactttcgtccttcatctttttttcatctcgatttagtcccttatgttataaaatgacaacaccttatcaattttta 38981788  T
Q  287 tgaga 291  Q
    |||||    
T  38981787 tgaga 38981783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 33568984 - 33569035
Alignment:
Q  240 gatttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    |||||| || ||||||||||||||||| ||||||||||||||||| ||||||    
T  33568984 gatttaatcatttatgttataaaatgacaatatcttatcatttttaatgaga 33569035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 42858598 - 42858555
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattttt 284  Q
    |||||||||||||||||||||||||  |||||||||||||||||    
T  42858598 atttagtcctttatgttataaaatgtcaatatcttatcattttt 42858555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 3539608 - 3539694
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||| || ||||||||||||||| |||||| ||||||||||||||         ||||| ||||||||||||||||||||||||    
T  3539608 acaattaatcccttaactttattttaggtaacattttcgtcctttatctttttttttgtcacaatttagtcctttatgttataaaat 3539694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 37093788 - 37093738
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtc 219  Q
    |||||||  ||||||||||| ||||||||||||||| ||||||||||||||    
T  37093788 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtc 37093738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 32458142 - 32458075
Alignment:
Q  159 ataaaattaag-caaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    ||||||||||| ||||||  ||||||||||| |||||||| |||||| |||||| |||| ||||||||    
T  32458142 ataaaattaaggcaaaattacacaattagtcccttaacttaattttaggtaacattttcatcctttat 32458075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 3294654 - 3294584
Alignment:
Q  156 taaataaa-attaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    |||||||| ||||||||||||  || ||||  || |||||||| ||||||||||||||||| |||||||||    
T  3294654 taaataaatattaagcaaaattacaaaatttatcccttaacttaattttaagtaacacttttgtcctttat 3294584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 27342930 - 27342885
Alignment:
Q  240 gatttagtcctttatgttataaaatgataatatcttatcatttttt 285  Q
    ||||||||||||||||||||||||||   ||| |||||||||||||    
T  27342930 gatttagtcctttatgttataaaatggcgataccttatcatttttt 27342885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 2318494 - 2318675
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||| |    
T  2318494 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttat-ttttttttgtcacgatttagtcctttatgttataaaatgaca 2318592  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2318593 atatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 2318675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 169 - 352
Target Start/End: Complemental strand, 9320147 - 9319964
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  9320147 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 9320048  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatgc 352  Q
    |||||||||||||||||||||||       ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  9320047 atatcttatcattttttatgagatttttttcaaagaaatttgattttctagacttgtatgatgaagatttacgtttgcctatgc 9319964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 18916626 - 18916808
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  18916626 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 18916725  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  18916726 atatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatg 18916808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 20364315 - 20364133
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  |||||||||||  |||||||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||| |    
T  20364315 gcaaaattacacaattagtcctttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaatgaca 20364216  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20364215 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 20364133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 169 - 349
Target Start/End: Original strand, 17846009 - 17846189
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||| ||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  17846009 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 17846108  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgccta 349  Q
    |||||||||||||||||||||||       ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  17846109 atatcttatcattttttatgagatttttttcaaagaaatttgattttctagacttgtatgatgaagatttacgtttgccta 17846189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 10044746 - 10044928
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||| |||||||| ||||||||||||||||| |    
T  10044746 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacaatttagtcatttatgttataaaatgaca 10044845  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  10044846 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcgtttgcctatg 10044928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 178 - 351
Target Start/End: Complemental strand, 44536520 - 44536346
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||        |||||||||||||||||||||||||||||||| ||||||||||    
T  44536520 cacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttat 44536421  T
Q  278 cattttttatgaga-nnnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||        |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  44536420 cattttttatgagattttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacatttgcctatg 44536346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 10108814 - 10108997
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||| ||||||         |||||||||||||| |||||||||||||||||     
T  10108814 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcttttatctttttttttgtcacgatttagtcatttatgttataaaatgac 10108913  T
Q  268 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||||||||||||       ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  10108914 aatatcttatcattttttatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgcctatg 10108997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 178 - 343
Target Start/End: Original strand, 4261163 - 4261328
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||||||        || ||||||||||||||||||||||||||||| ||||||||||    
T  4261163 cacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttgttacgatttagtcctttatgttataaaatgacaatatcttat 4261262  T
Q  278 cattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtt 343  Q
    ||||||||||||||       |||||||||| ||||||||| ||||||||||||||||||| ||||    
T  4261263 cattttttatgagatttttttcaaagaaattagattttctaggcttgtatgatgaagatttgcgtt 4261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 27360120 - 27360304
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn--gtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  ||||||||||| ||||||||||||||| |||| | |||||||||||||           ||||| ||||||||||||||||||| ||||||    
T  27360120 gcaaaattacacaattagtcccttaactttattttaggtaatattttcgtcctttatattttttttttgtcacaatttagtcctttatgttattaaatga 27360219  T
Q  267 taatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||||||||||||||||||| ||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27360220 caatatcttatcattttttaagagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 27360304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 601328 - 601512
Alignment:
Q  169 gcaaaatagcacaattagtctctt-aactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  |||||||| |||||| |||||||||||| |||||||||||||||||||||         |||||||||||||| |||||  ||||||||||    
T  601328 gcaaaattacacaattaatctctttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcttttataatataaaatga 601427  T
Q  267 taatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||||||||||||||||||||||||       ||||||||||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  601428 caatatcttatcattttttatgagatttttttcaaagaaatttgattttatatacttttatgatgaagatttacatttgcctatg 601512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 9319812 - 9319898
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  9319812 cacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 9319898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 27360466 - 27360371
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  27360466 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 27360371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 8322515 - 8322411
Alignment:
Q  181 aattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatcat 280  Q
    |||| ||| |||||||| |||||| |||||| ||||||||||||||         ||||||||||||||||||||||||||||||| |||||||||||||    
T  8322515 aattcgtcccttaacttaattttaggtaacattttcgtcctttatcttttttt--tcacgatttagtcctttatgttataaaatgacaatatcttatcat 8322418  T
Q  281 tttttat 287  Q
    |||||||    
T  8322417 tttttat 8322411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 17846342 - 17846257
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||| |||||||||||||    
T  17846342 acaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctatatgttataaaat 17846257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 30337425 - 30337607
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  |||||||||||  ||||||| |||||| |||||| ||||||||||||||        || ||||||||||||||||||||||||||||| |    
T  30337425 gcaaaattacacaattagtccattaacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaatgaca 30337524  T
Q  269 atatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||| ||||||||||| |||||||       ||| |||||||||||||||    | ||||||||||||||| |||||| |||||    
T  30337525 ctattttatcatttttgtatgaga-atttttcaatgaaatttgattttcttgaatagtatgatgaagatttgcgtttgtctatg 30337607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 18916957 - 18916874
Alignment:
Q  181 aattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||||||||||||||    
T  18916957 aattagtcccttaactttattttaggtaacactttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaat 18916874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 20363971 - 20364066
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||| ||||||||| |||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  20363971 gcaaaattacacaattagtcccttaattttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 20364066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 2318834 - 2318740
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||| |||||||||||||||    
T  2318834 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-ttcttttgtcacgatttagtcttttatgttataaaat 2318740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 13862503 - 13862615
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    ||||||| |||  ||||||| ||||||||||| ||||||||||||||||        ||| ||| |||||||||||||||||||||||| ||||| || |    
T  13862503 cacaattcgtcctttaacttaattttaagtaatactttcgtcctttatcttttttt-gtctcgaattagtcctttatgttataaaatgacaatatttttt 13862601  T
Q  278 cattttttatgaga 291  Q
    ||||||| ||||||    
T  13862602 catttttaatgaga 13862615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 4261500 - 4261376
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc---nnnnnnnngtcacgatttagtcctttatgttataaaatg 265  Q
    |||||||  |||||||||||  |||||||||||||| |||||||||||||||||||||           |||||||||||||||| |||||||||||||     
T  4261500 gcaaaattacacaattagtccgttaactttattttaggtaacactttcgtcctttatctttttttttttgtcacgatttagtcctctatgttataaaata 4261401  T
Q  266 ataatat-cttatcattttttatga 289  Q
    | || ||  ||||||||||||||||    
T  4261400 acaacatagttatcattttttatga 4261376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 37084688 - 37084734
Alignment:
Q  239 cgatttagtcctttatgttataaaatgataatatcttatcatttttt 285  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  37084688 cgatttagtcatttatgttataaaatgacaatatcttatcatttttt 37084734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 601677 - 601620
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  601677 gcaaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatc 601620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 10109146 - 10109038
Alignment:
Q  183 ttagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgataatat-cttatcat 280  Q
    |||||| |||||||||||||||  |||||||||||||||||||          |||||||||||||||||||||||||||||| | |||||  ||||| |    
T  10109146 ttagtcccttaactttattttagttaacactttcgtcctttatatttttttttgtcacgatttagtcctttatgttataaaataacaatatagttatcct 10109047  T
Q  281 tttttatga 289  Q
    |||||||||    
T  10109046 tttttatga 10109038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 5547386 - 5547339
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  5547386 cacaattagtcccttaacttaattttaggtaacactttcgtcctttat 5547339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 44536166 - 44536237
Alignment:
Q  156 taaataaaattaag-caaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    ||||||||||| || ||| || ||||||||||||  |||||||||||||| ||||||||| |||||||||||    
T  44536166 taaataaaatttaggcaatattgcacaattagtcctttaactttattttaggtaacacttccgtcctttatc 44536237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 9991921 - 9991971
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    |||||||||||||| || |||||||| ||||| ||||||||||||||||||    
T  9991921 atttagtcctttatattctaaaatgacaatattttatcattttttatgaga 9991971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 41385817 - 41385779
Alignment:
Q  253 atgttataaaatgataatatcttatcattttttatgaga 291  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  41385817 atgttataaaatgttaatatcttatcattttttatgaga 41385779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 10520866 - 10520907
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattt 282  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  10520866 atttagtcctttatattataaaatgacaatatcttatcattt 10520907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 43520439 - 43520394
Alignment:
Q  246 gtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  43520439 gtcctttatgttataaaatgacaatatcttatcaattttaatgaga 43520394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 31770057 - 31769961
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagattt 338  Q
    |||||||||| |||||| |||||||| ||||| ||||||||||| ||||||       ||| ||||||||| |||||   ||||||||||||||||||    
T  31770057 atttagtcctctatgttttaaaatgacaatattttatcatttttaatgaga-ctttttcaatgaaatttgagtttcttgacttgtatgatgaagattt 31769961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 18178433 - 18178377
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    |||||||  |||||||||||  |||||||||| ||| |||| |||||||||||||||    
T  18178433 gcaaaattacacaattagtcctttaactttatattaggtaatactttcgtcctttat 18178377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 6e-59; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 171 - 351
Target Start/End: Complemental strand, 40902670 - 40902490
Alignment:
Q  171 aaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataat 270  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||        ||||||||||||||||||||||||||| |||| |||    
T  40902670 aaaatagcacaattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatgttataagatgacaat 40902571  T
Q  271 atcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40902570 atcttatcattttttatgagattattttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 40902490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 1549328 - 1549510
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  1549328 gcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 1549427  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1549428 atatcttatcattttttatgagattttttttaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 1549510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 155 - 351
Target Start/End: Original strand, 2026708 - 2026904
Alignment:
Q  155 ataaataaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttat 254  Q
    ||||| ||||| | |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||    
T  2026708 ataaaaaaaataaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttat 2026807  T
Q  255 gttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  2026808 gttataaaatgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgaagaagatttacgtttgcctatg 2026904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 17985632 - 17985451
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||        ||||||||||| |||||||| ||||||||||| |    
T  17985632 gcaaaatagcacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttaatcctttatattataaaatgaca 17985533  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17985532 atatcttatcattttttatgagatttttt-caaagaaatttgattttctatgcttgtatgatgaagatttacgattgcctatg 17985451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 30562785 - 30562966
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||| || |||||||||||||||||| |    
T  30562785 gcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttt-gtcacgatttggttctttatgttataaaatgaca 30562883  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30562884 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 30562966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 351
Target Start/End: Complemental strand, 17611757 - 17611587
Alignment:
Q  181 aattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatcat 280  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||  |||||||||||||    
T  17611757 aattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgtcaatatcttatcat 17611658  T
Q  281 tttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||       ||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  17611657 tttttatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcctatg 17611587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 170 - 351
Target Start/End: Complemental strand, 30002552 - 30002372
Alignment:
Q  170 caaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataa 269  Q
    ||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||        |||||||||||||||||||||||||||||||| ||    
T  30002552 caaaataacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttt-gtcacgatttagtcctttatgttataaaatgacaa 30002454  T
Q  270 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||||||||||        ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  30002453 tatcttatcattttttatgagattttttttaaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcctatg 30002372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 178 - 351
Target Start/End: Complemental strand, 25780224 - 25780052
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||         |||| ||||||||| ||||||||||||||||| ||||||||||    
T  25780224 cacaattagtcccttaactttattttaggtaacactttcgtcctttat-ttttttttgtcatgatttagtcatttatgttataaaatgacaatatcttat 25780126  T
Q  278 cattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  25780125 cattttttatgagatttttttcaaagaaatttgattttctaagcttgtatgatgaagatttacgtttgcatatg 25780052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 12139025 - 12139207
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||||||||| ||||||||| |||| |||||||| ||||||         |||||||||||||||||||||||||||||||| |    
T  12139025 gcaaaattacacaattagtctcttaattttattttaggtaatactttcgttctttattttttttttgtcacgatttagtcctttatgttataaaatgaca 12139124  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||| |||||||| ||||||||||||||||||| ||||||| ||||    
T  12139125 atatcttatcattttttatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgcatatg 12139207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 7114207 - 7114026
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  |||||||||||  ||||||||||||||  |||||||||||||||||||         ||||| |||||||||||||||||||||||||| |    
T  7114207 gcaaaattacacaattagtccattaactttattttagataacactttcgtcctttat-ttttttttgtcacaatttagtcctttatgttataaaatgaca 7114109  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||| |||||||||||| || ||||||||||||||||||||||||||||||||    
T  7114108 atatcttatcattttttatgagatttttttcaaataaatttgattttttaggcttgtatgatgaagatttacgtttgcctatg 7114026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 17985297 - 17985383
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  17985297 cacaattagtctcttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 17985383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 17611426 - 17611521
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  17611426 gcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatcttttttctgtcacgatttagtcctttatgttataaaat 17611521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 40902328 - 40902423
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  40902328 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttgttgtcacgatttagtcctttatgttataaaat 40902423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 2027064 - 2026969
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||| ||||||||||||||||||||||||    
T  2027064 gcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatcttttctttgtcacaatttagtcctttatgttataaaat 2026969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 12115024 - 12115136
Alignment:
Q  238 acgatttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatt 337  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||       ||| |||||||||||||||| ||| ||||||||||||||    
T  12115024 acgatttaatcctttatgttataaaatgatactattttatcattttttatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatt 12115122  T
Q  338 tacgtttgcctatg 351  Q
    | | |||| |||||    
T  12115123 tgcatttgtctatg 12115136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 30002221 - 30002307
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||||        ||||||||||||||||||||||||||||||    
T  30002221 cacaattagtcccttaactttattttatgtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 30002307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 7113866 - 7113960
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaa 263  Q
    |||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||         |||||||||||||||||||| ||||||||    
T  7113866 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatattataaaa 7113960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 264
Target Start/End: Complemental strand, 12115301 - 12115201
Alignment:
Q  164 attaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaa 263  Q
    |||| |||||||  ||||||||||| |||||||| |||||| |||||| ||||||||||||||        || ||||||||||||||||||||||||||    
T  12115301 attaggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaa 12115202  T
Q  264 t 264  Q
    |    
T  12115201 t 12115201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 12139369 - 12139273
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||         |||||||||||||||| |||||||||||||    
T  12139369 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctctatgttataaaat 12139273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 351
Target Start/End: Original strand, 4969387 - 4969548
Alignment:
Q  191 ttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgataatatcttatcattttt-tatg 288  Q
    ||||||| |||||| |||||||||||||||||||||         || |||||||||||||||||||||| |||||| | ||| ||||||||||| ||||    
T  4969387 ttaacttaattttaggtaacactttcgtcctttatctttttttttgtaacgatttagtcctttatgttattaaatgacactattttatcatttttgtatg 4969486  T
Q  289 agannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||       ||| |||||||||||||||   || ||||||||||||||| |||||| |||||    
T  4969487 aga-ttttttcaatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatg 4969548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 19897452 - 19897340
Alignment:
Q  238 acgatttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatt 337  Q
    |||||||| |||||||||||||||||||| | ||| ||||||||||||||||||        || |||||||||||||||| ||| |||||||| |||||    
T  19897452 acgatttaatcctttatgttataaaatgacactattttatcattttttatgagattttttt-aatgaaatttgattttctaggctagtatgatgtagatt 19897354  T
Q  338 tacgtttgcctatg 351  Q
    | | |||| |||||    
T  19897353 tgcatttgtctatg 19897340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 30563128 - 30563032
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||| ||||||| ||||||||||||||| ||||||||||||| |||||||         ||||||||||||||||||||||||||||||    
T  30563128 gcaaaattacacgattagtcccttaactttattttaggtaacactttcgttctttatctttttttttgtcacgatttagtcctttatgttataaaat 30563032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 29233699 - 29233745
Alignment:
Q  180 caattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  29233699 caattggtctcttaactttattttaagtaacactctcgtcctttatc 29233745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 19897187 - 19897272
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||||| |||||||| |||||| |||||| ||||||||||||||        || ||||||||||||||||||||| |||||    
T  19897187 acaattagtcccttaacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttaaaaaat 19897272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 25779895 - 25779943
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||||||    
T  25779895 cacaattagtcccttaactttattttagataacactttcgtcctttatc 25779943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 47194003 - 47193951
Alignment:
Q  239 cgatttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    |||||||||| |||||||||| |||||| ||||||||||| ||||| ||||||    
T  47194003 cgatttagtcttttatgttattaaatgacaatatcttatcttttttaatgaga 47193951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 34480483 - 34480440
Alignment:
Q  183 ttagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||    
T  34480483 ttagtcccttaactttattttaagtaacaatttagtcctttatc 34480440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 30306852 - 30306902
Alignment:
Q  240 gatttagtcctttatgttataaaatgataatatcttatcattttttatgag 290  Q
    ||||||||| ||||| ||||||||||| |||||||||| |||||| |||||    
T  30306852 gatttagtcttttatattataaaatgacaatatcttataatttttaatgag 30306902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 44066997 - 44066951
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattttttat 287  Q
    |||||||| ||||||||||||||||  |||||||||||| |||||||    
T  44066997 atttagtcatttatgttataaaatgtcaatatcttatcaatttttat 44066951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 49564186 - 49564243
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||  ||||||| |||||||||||| |||| | |||||||||| ||||||||||    
T  49564186 gcaaaattacacaattcgtctcttaacttaatttcaggtaacacttttgtcctttatc 49564243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 13294603 - 13294786
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  13294603 gcaaaatagcacaattagtcccttaactttattttatgtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgac 13294702  T
Q  268 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13294703 aatatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacatttgcctatg 13294786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 178 - 351
Target Start/End: Complemental strand, 50161452 - 50161279
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||    
T  50161452 cacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttat 50161353  T
Q  278 cattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||       ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50161352 cattttttatgagatttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctatg 50161279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 171 - 351
Target Start/End: Original strand, 5260197 - 5260376
Alignment:
Q  171 aaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataat 270  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||        |||||||||||||||||||||||||||||||| |||    
T  5260197 aaaatagcacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttt-gtcacgatttagtcctttatgttataaaatgacaat 5260295  T
Q  271 atcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5260296 atcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtctgcctatg 5260376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 23163624 - 23163442
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  23163624 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 23163525  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  23163524 atatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcttgtataatgaagatttacgtttgcctatg 23163442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 48419561 - 48419379
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  48419561 gcaaaataacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 48419462  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48419461 atatcttatcattttttatgagatttttttcaaaaaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 48419379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 49621440 - 49621622
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  49621440 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 49621539  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  49621540 atatcttatcattttttatgagatgtttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatg 49621622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 9526153 - 9525971
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||        |||||||||||||||||||||||||||||||| |    
T  9526153 gcaaaataacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 9526054  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||        |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  9526053 atatcttatcattttttatgagatttttttaaaagaaatttgattttataagcttgtatgatgaagatttacgtttgcctatg 9525971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 33692263 - 33692445
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  33692263 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 33692362  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  33692363 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcatttgcctatg 33692445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 21707947 - 21707765
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||||||||||||||||||| |||| |||||||| |||||||        ||||||||||||||||||||||||| |||||| |    
T  21707947 gcaaaattacacaattagtctcttaactttattttaggtaatactttcgttctttatcttttttttgtcacgatttagtcctttatgttattaaatgaca 21707848  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||| ||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21707847 atatcttatcattttttaagagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 21707765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 28458866 - 28458684
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||| ||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  28458866 gcaaaattacacaattagtcccttaactttattttaggtaatactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 28458767  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  28458766 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcctatg 28458684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 169 - 349
Target Start/End: Complemental strand, 21053640 - 21053460
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| ||||||||||| |||||||||        || ||||||||||||||||| ||||||||||| |    
T  21053640 gcaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgttacgatttagtcctttatattataaaatgaca 21053541  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgccta 349  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21053540 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgccta 21053460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 351
Target Start/End: Original strand, 3546501 - 3546672
Alignment:
Q  181 aattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnng-tcacgatttagtcctttatgttataaaatgataatatcttatca 279  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||        | ||||||||||||||||||||||||||||||| ||||||||||||    
T  3546501 aattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttggtcacgatttagtcctttatgttataaaatgacaatatcttatca 3546600  T
Q  280 ttttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3546601 ttttttatgagattcttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 3546672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 26202523 - 26202705
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  26202523 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttcttgtcacgatttagtcctttatgttataaaatgaca 26202622  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||| |||||||  ||||||||||||||||||| ||||| ||||||    
T  26202623 atatcttatcattttttatgagatttttttcaaagaaatttaattttcttggcttgtatgatgaagatttgcgtttacctatg 26202705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 42857146 - 42856964
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||| ||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||   |    
T  42857146 gcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaattgca 42857047  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42857046 atatcttatcattttttatgagatttttttcaaaaaaatttgattttctaagcttgtatgatgaagatttacgtttgcctatg 42856964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 46143615 - 46143434
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||  ||||||||||||||| ||||||||||||||||||||         |||||||||||||||||||| |||||||||||||    
T  46143615 gcaaaattacacaattagtgccttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatattataaaatgata 46143516  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||| ||||||||||||||||||       |||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  46143515 atattttatcattttttatgagatttttttcaaagaaatttgattttctaggctt-tatgatgaagatttacgtttgcctatg 46143434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 20931322 - 20931139
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||  ||| ||||||  |||||||||||||||  ||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  20931322 gcaaaattacacgattagttccttaactttattttagataacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgac 20931223  T
Q  268 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||| |       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20931222 aatatcttatcattttttatgatatttttttcaaagaaatttgattttctaagcttgtatgatgaagatttacgtttgcctatg 20931139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 33369510 - 33369695
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn--gtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||| ||          |||||||||||||| |||||||||||||||||    
T  33369510 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttttcttttttttttgtcacgatttagtcatttatgttataaaatga 33369609  T
Q  267 taatatcttatcatttttt-atgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     |||||||||||||||||| ||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33369610 caatatcttatcatttttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 33369695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 52690442 - 52690266
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn--gtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||          || ||||||||||| |||||||||||||||||    
T  52690442 gcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatctttttttttggttacgatttagtcgtttatgttataaaatga 52690343  T
Q  267 taatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtt 343  Q
     ||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||| ||||    
T  52690342 caatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcgtt 52690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 41689390 - 41689575
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngt--cacgatttagtcctttatgttataaaatga 266  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||         |  ||||||||||||||||||||||||||||||    
T  41689390 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttttttcacgatttagtcctttatgttataaaatga 41689489  T
Q  267 taatatcttatcattttttatg-agannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||||||||||||||||||||| |         |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41689490 caatatcttatcattttttatgaatttttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 41689575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 55140199 - 55140379
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||| |||| || ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||| ||||||||||| |    
T  55140199 gcaaaattacacgattaatcccttaactttattttaggtaacactttcgtcctttatcttttttt-gtcacgatttagtcctttattttataaaatgaca 55140297  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  55140298 atatcttatcattttttatgaga-ttttttcaaagaaatttgattttctaggcttgtataatgaagatttgcgtttgcctatg 55140379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 169 - 349
Target Start/End: Original strand, 37872768 - 37872944
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn--gtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  ||||||||||| ||||||||||||||| |||||| ||||||||||||||          ||||||||||||||||||||||||||||||||    
T  37872768 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttttgtcacgatttagtcctttatgttataaaatga 37872867  T
Q  267 taatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgccta 349  Q
     ||||||||||||||||||||||||       |      ||||||||||||| ||||||||||||||||||||||||||||||    
T  37872868 caatatcttatcattttttatgagatttttttc------atttgattttctaggcttgtatgatgaagatttacgtttgccta 37872944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 23549776 - 23549660
Alignment:
Q  235 gtcacgatttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaag 334  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||       |||| |||||| |||||||| |||||||||||||||    
T  23549776 gtcacggtttagtcctttatgttataaaatgacaatatctcatcattttttatgagatttttttcaaaaaaatttaattttctaggcttgtatgatgaag 23549677  T
Q  335 atttacgtttgcctatg 351  Q
    |||| ||||||||||||    
T  23549676 atttgcgtttgcctatg 23549660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 33369847 - 33369735
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatat-ctta 276  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||| | || ||  |||    
T  33369847 cacaattagtctcttaactatattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataacaacatagtta 33369748  T
Q  277 tcattttttatga 289  Q
    |||||||||||||    
T  33369747 tcattttttatga 33369735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 13294947 - 13294852
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  13294947 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 13294852  T

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Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 23163282 - 23163377
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  23163282 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 23163377  T

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Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 49621782 - 49621687
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  49621782 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 49621687  T

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Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 25297681 - 25297865
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc--nnnnnnnngtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  ||||||||||| |||||||| |||||| |||||||||||||||||||||          || |||||||||||||||||||||||||||||    
T  25297681 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatcttttttttttgtaacgatttagtcctttatgttataaaatga 25297780  T
Q  267 taatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     |  || ||||||||||| |||||||       ||| ||||| |||||||||| ||| |||||| |||||||| |||||| |||||    
T  25297781 cacaattttatcatttttgtatgaga-ttttttcaatgaaatctgattttctaggctagtatgacgaagatttgcgtttgtctatg 25297865  T

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Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 55742739 - 55742791
Alignment:
Q  299 caaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  55742739 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 55742791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 20930976 - 20931071
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||| |||||||| |||||||||||||||    
T  20930976 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacaatttagtcttttatgttataaaat 20931071  T

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Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 50161125 - 50161213
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc--nnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||          ||||||||||||||||||||||||||||||    
T  50161125 cacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctttatgttataaaat 50161213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 2685986 - 2686162
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| |||||||| |||||| |||||||||||||| ||| |         || |||||||||||||||||||||||||||||      
T  2685986 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtctttttt----tttttgtaacgatttagtcctttatgttataaaatgacg 2686081  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||| |||||| |||||||||||       ||| |||||||||||||||| ||| ||||||||| ||||| |||||| |||||    
T  2686082 ctattttatca-tttttatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgacgatttgcgtttgtctatg 2686162  T

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Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 30799391 - 30799503
Alignment:
Q  238 acgatttagtcctttatgttataaaatgataatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagat 336  Q
    ||||||||||||||||||||||||||||| | ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| |||||||||| ||    
T  30799391 acgatttagtcctttatgttataaaatgacactattttatcatttttgtatgaga--tttttcaatgaaatttgattttctaggctagtatgatgaatat 30799488  T
Q  337 ttacgtttgcctatg 351  Q
    || |||||| |||||    
T  30799489 ttgcgtttgtctatg 30799503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 289
Target Start/End: Original strand, 42856794 - 42856925
Alignment:
Q  158 aataaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgtt 257  Q
    ||||| |||| |||||||  ||||||||||| ||||| ||||||||| ||||||||||||||||||||         |||||||||||||| ||||||||    
T  42856794 aataatattaggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttat-tttttttggtcacgatttagtcttttatgtt 42856892  T
Q  258 ataaaatgataatat-cttatcattttttatga 289  Q
    ||||||| | || ||  ||||||||||||||||    
T  42856893 ataaaataacaacatagttatcattttttatga 42856925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 37873095 - 37873012
Alignment:
Q  181 aattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||        |||||||||||||| |||||||||||||||    
T  37873095 aattagtcccttaactttattttatgcaacactttcgtcctttatcttttttttgtcacgatttagtcatttatgttataaaat 37873012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 46143273 - 46143368
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||| ||||||||| |||||| ||||||||||||||        ||||| ||||||||||||||||||||||||    
T  46143273 gcaaaattacacaattagtcccttaattttattttaggtaacattttcgtcctttatcttttttttgtcacaatttagtcctttatgttataaaat 46143368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 9525806 - 9525930
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcc---tttatcnnnnnnnngtcacgatttagtcctttatgttataaaatg 265  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||   ||||||        |||||||||||||| |||||||||||||||     
T  9525806 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttttttatcttttttttgtcacgatttagtcatttatgttataaaata 9525905  T
Q  266 ataatat-cttatcattttttatga 289  Q
    | || ||  ||||||||||||||||    
T  9525906 acaacatagttatcattttttatga 9525930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 28458531 - 28458644
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttataaaatgataatat-ctt 275  Q
    ||||||||||| |||||| |||||||| ||||||||| |||||||||||         |||||||||||||||||||||||||||||| | |||||  ||    
T  28458531 cacaattagtcccttaacattattttaggtaacacttccgtcctttatctttttttttgtcacgatttagtcctttatgttataaaataacaatatagtt 28458630  T
Q  276 atcattttttatga 289  Q
    ||| ||||||||||    
T  28458631 atccttttttatga 28458644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 3546835 - 3546712
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc--nnnnnnnngtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  |||||||||| |||||||||||||||| |||||||||||||| ||||||          ||||| |||||||||||||||||||||||| |    
T  3546835 gcaaaattacacaattagtttcttaactttattttaggtaacactttcgtcatttatcttttttttttgtcacaatttagtcctttatgttataaaataa 3546736  T
Q  267 taatat-cttatcattttttatga 289  Q
     || ||  ||||||||||||||||    
T  3546735 caacatagttatcattttttatga 3546712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 30055209 - 30055393
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn--gtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||  ||||||||||| |||||||| |||||| |||||||||| |||||||||           || |||||||||||||||||||||||||||||    
T  30055209 gcaaaattacacaattagtcccttaacttaattttaggtaacacttttgtcctttattttatttttttgtaacgatttagtcctttatgttataaaatga 30055308  T
Q  267 taatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     | ||| ||||||||||| |||||||       |||  ||||||||||||||   || ||||||| ||||||| ||||||||||||    
T  30055309 cactattttatcatttttgtatgaga-ttttttcaataaaatttgattttcttgactagtatgataaagatttgcgtttgcctatg 30055393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 50977723 - 50977627
Alignment:
Q  242 tttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagattt 338  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||||||       ||| | ||| ||||||| || | |||||||||||||||||    
T  50977723 tttagtcctttatattataaaatgacaatatcgtatcattttttatgagatttttttcaatggaatatgattttttaggtttgtatgatgaagattt 50977627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 55742952 - 55742857
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  |||||||||||  ||||||||||||||  |||||||||||||||||||         |||||||||||||||| |||||||||||||    
T  55742952 gcaaaattacacaattagtcctttaactttattttagataacactttcgtcctttattttttttttgtcacgatttagtcctctatgttataaaat 55742857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 33692606 - 33692512
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||| ||||||||| |||||||||||||| ||||||        |||||||||||||||| |||||||||||||    
T  33692606 gcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcatttatc-tttttttgtcacgatttagtcctctatgttataaaat 33692512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 52690097 - 52690191
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||| | ||||||||||||||        |||||||||||||||| |||||||||||||    
T  52690097 gcaaaattacacaattagtcgcttaactttattttaggtaatattttcgtcctttatc-tttttttgtcacgatttagtcctctatgttataaaat 52690191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 30799302 - 30799350
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  30799302 cacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 30799350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 5260525 - 5260442
Alignment:
Q  181 aattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||        |||| |||||| || |||||||||||||||    
T  5260525 aattagtcttttaactttattttaggtaacattttcgtcctttatctttgttttgtcatgatttaatcatttatgttataaaat 5260442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 338
Target Start/End: Original strand, 22335505 - 22335602
Alignment:
Q  239 cgatttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagattt 338  Q
    ||||||| ||||||| |||||||||||| |||||||| |||||||||||  ||       ||| ||||| |||||||||| | |||||||||||||||||    
T  22335505 cgatttattcctttacgttataaaatgacaatatcttctcattttttat--gaattttttcaatgaaatctgattttctaggtttgtatgatgaagattt 22335602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 30799670 - 30799611
Alignment:
Q  167 aagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||||  ||||||||||| |||||||| |||||| |||||| ||||||||||||||    
T  30799670 aagcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttatc 30799611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 21707616 - 21707698
Alignment:
Q  181 aattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||||||||||||||||||||| | ||||||  ||||||        |||||||||||||| |||||||||||||||    
T  21707616 aattagtctcttaactttattttaagtaatattttcgttttttatc-tttttttgtcacgatttagtcatttatgttataaaat 21707698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 41689727 - 41689641
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||| | |||||||||||||||||||| | ||||||||||||||        || || |||| |||||||||||||||||||    
T  41689727 cacaattagccccttaactttattttaagtaatattttcgtcctttatcttttttttgttacaattttgtcctttatgttataaaat 41689641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 55742622 - 55742675
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctt 222  Q
    |||||||  ||||||||||| ||||||||||||||| |||||| ||||||||||    
T  55742622 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctt 55742675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 53232372 - 53232328
Alignment:
Q  240 gatttagtcctttatgttataaaatgataatatcttatcattttt 284  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||    
T  53232372 gatttagtcctttatattataaaatgacaatatcttattattttt 53232328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 55140541 - 55140485
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    |||||||  |||||||| ||  ||||||||||||||||||| |||||||||||||||    
T  55140541 gcaaaattacacaattaatcctttaactttattttaagtaatactttcgtcctttat 55140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 25298016 - 25297969
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    ||||||||||| |||||||| ||||||||||||| |||| ||||||||    
T  25298016 cacaattagtcccttaacttaattttaagtaacattttcatcctttat 25297969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 9851953 - 9851907
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    |||||| |||||||||||| ||||||||||||| ||||||| |||||    
T  9851953 acaattcgtctcttaacttaattttaagtaacattttcgtcatttat 9851907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 30055548 - 30055494
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtccttt 223  Q
    |||||||  ||||||||||| |||||||| |||||| |||||| |||||||||||    
T  30055548 gcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtccttt 30055494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 264
Target Start/End: Original strand, 21053365 - 21053394
Alignment:
Q  235 gtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||||||||||||||||||||||    
T  21053365 gtcacgatttagtcctttatgttataaaat 21053394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 17872388 - 17872440
Alignment:
Q  239 cgatttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    ||||| ||||||||||| |||||||||| || | ||||||| |||||||||||    
T  17872388 cgattgagtcctttatgctataaaatgacaacaccttatcaatttttatgaga 17872440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 8852150 - 8851967
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  8852150 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgac 8852051  T
Q  268 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8852050 aatatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcctatg 8851967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 169 - 349
Target Start/End: Original strand, 22316721 - 22316901
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  22316721 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 22316820  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgccta 349  Q
    |||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22316821 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgccta 22316901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 37513092 - 37513274
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||||||        |||||||||||||||||||||||||||||||| |    
T  37513092 gcaaaataacacaattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 37513191  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  37513192 atatcttatcattttttatgagattttttttaaagaaatttgattttctaggcttgtatgatgaagatttacatttgcctatg 37513274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 178 - 351
Target Start/End: Original strand, 36229773 - 36229946
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||    
T  36229773 cacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttat 36229872  T
Q  278 cattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||       ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  36229873 cattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcttatg 36229946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 55009100 - 55009280
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||| | |    
T  55009100 gcaaaatagcacaattagtct-ttaactttattttaggtaacactttcgtcctttatcttttttt-gtcacgatttagtcctttatgttataaaataaca 55009197  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||| ||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55009198 atatctaatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttacctatg 55009280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 192 - 351
Target Start/End: Original strand, 49621002 - 49621161
Alignment:
Q  192 taactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    ||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  49621002 taactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatctcatcattttttatgaga 49621101  T
Q  292 nnnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49621102 tttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctatg 49621161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 169 - 349
Target Start/End: Original strand, 22975346 - 22975526
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||| ||| ||| ||||||        |||||||||||||||||||||||||||||||| |    
T  22975346 gcaaaattacacaattagtcccttaactttattttaggtaacatttttgtcatttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 22975445  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgccta 349  Q
    ||||||||| |||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22975446 atatcttattattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgccta 22975526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 351
Target Start/End: Original strand, 25847456 - 25847628
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatc 278  Q
    |||||||||| ||||| ||||||||| ||||||||||||| |||||||        |||||||||||||||||||||||||||||||| |||||||||||    
T  25847456 acaattagtcccttaattttattttaggtaacactttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatc 25847555  T
Q  279 attttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||       ||||||||||||||| | ||||| |||||||||||||||||||||||||||||    
T  25847556 attttttatgagatttttttcaaagaaatttgattctatatgcgtgtatgatgaagatttacgtttgcctatg 25847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 190 - 348
Target Start/End: Complemental strand, 49985034 - 49984876
Alignment:
Q  190 cttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatcattttttatga 289  Q
    ||||||||||||||| |||||||||||||| ||||||        |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49985034 cttaactttattttaggtaacactttcgtcttttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatcattttttatga 49984935  T
Q  290 gannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcct 348  Q
    ||       |||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  49984934 gatttttttcaaagaaatttgattttctaagtttgtatgatgaatatttacgtttgcct 49984876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 28829754 - 28829935
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||   |||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  28829754 gcaaaattacacaattagttctttaactttattttaggtaacactttcgtcctttatcttttttt-gtcacgatttagtcctttatgttataaaatgaca 28829852  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||    
T  28829853 atatcttatcattttttatgagatttttttcaaagaaatttaattttctaagcttgtatgatgaagatttgcgtttacctatg 28829935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 351
Target Start/End: Complemental strand, 48434148 - 48433965
Alignment:
Q  168 agcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatga 266  Q
    ||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||||||    
T  48434148 agcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatatatttttttgtcacgatttagtcctttatgttataaaatga 48434049  T
Q  267 taatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     |||| |||||||||||||||||||       |||||||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  48434048 caatagcttatcattttttatgaga-ttttttcaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcctatg 48433965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 23043534 - 23043352
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||  |||||||||||  |||||||||||||| |||||| |||||||||||||          ||||||||||||||||||||||||||||||||     
T  23043534 gcaaaattacacaattagtcctttaactttattttaggtaacattttcgtcctttatttatttttttgtcacgatttagtcctttatgttataaaatgac 23043435  T
Q  268 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  23043434 aatatcttatcattttttatgaga-ttttttcaaagaaatttgattttctaggcttgtatgatgaaggtttgcgtttgcctatg 23043352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 11121284 - 11121459
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctt--tatcnnnnnnnngtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||||||||||  |||         |||||| |||||||||  ||||||||||||||    
T  11121284 gcaaaatagcacaattagtcccttaactttattttaggcaacactttcgtcctttatattttttttttgtcacggtttagtcctaaatgttataaaatga 11121383  T
Q  267 taatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgttt 344  Q
     |||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  11121384 caatatcttatcaatttttatgagatttttg--aaagaaatttgattttctatgcttgtatgatgaagatttacgttt 11121459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 245 - 348
Target Start/End: Complemental strand, 9296650 - 9296547
Alignment:
Q  245 agtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgttt 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||| || ||||||||||||||||||||||    
T  9296650 agtcctttatgttataaaatgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcatgtatgatgaagatttacgttt 9296551  T
Q  345 gcct 348  Q
    ||||    
T  9296550 gcct 9296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 165 - 351
Target Start/End: Complemental strand, 49711747 - 49711562
Alignment:
Q  165 ttaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||||||  || |||||||| ||||||||||||||| ||||||||||||||| ||||         ||||| |||||||||||| ||||||||| |    
T  49711747 ttaagcaaaattacataattagtcccttaactttattttaggtaacactttcgtccgttat-ttttttttgtcacaatttagtcctttttgttataaa-t 49711650  T
Q  265 gataatatcttatcattttttatgagannnnnnnc-aaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    || ||||||||||||||||||||||||         |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  49711649 gacaatatcttatcattttttatgagatttttttttaaagaaatttgattttttaggcttgtatgatgaagatttacgtttgcctatg 49711562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 351
Target Start/End: Original strand, 44506056 - 44506229
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    |||||||| || |||||||| |||||| |||||||||||||||||||||        || ||||||||||||||||||||||||||||| | ||| ||||    
T  44506056 cacaattaatcccttaacttaattttaggtaacactttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaatgacactattttat 44506155  T
Q  278 cattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||| |||||||       ||| |||||||||||||||| ||| |||||||||||||||  ||||| |||||    
T  44506156 catttttgtatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatg 44506229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 264
Target Start/End: Original strand, 8851797 - 8851900
Alignment:
Q  161 aaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttata 260  Q
    ||||||| |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||    
T  8851797 aaaattaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttata 8851896  T
Q  261 aaat 264  Q
    ||||    
T  8851897 aaat 8851900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 37513435 - 37513340
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  37513435 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 37513340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 25847789 - 25847668
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||| ||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||| | |    
T  25847789 gcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 25847690  T
Q  269 atat-cttatcattttttatga 289  Q
    | ||  ||||||||||||||||    
T  25847689 acatagttatcattttttatga 25847668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 22317064 - 22316969
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||| ||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  22317064 gcaaaattacacgattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 22316969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 11121635 - 11121531
Alignment:
Q  161 aaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttat 259  Q
    |||||||  ||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||    
T  11121635 aaaattagacaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttat 11121536  T
Q  260 aaaat 264  Q
    |||||    
T  11121535 aaaat 11121531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 17574374 - 17574553
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||| |||  ||||||| |||||| ||||||||||||||||||||         || ||||||||||||||||||||||||||| | |    
T  17574374 gcaaaattacacaattcgtccattaacttaattttaggtaacactttcgtcctttat-ttttttttgttacgatttagtcctttatgttataaaattaca 17574472  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||| ||||||||||||||||||       ||| | ||||||||||| || |||| ||||||||| |||| |||||| |||||    
T  17574473 atattttatcattttttatgaga--tttttcaatgcaatttgattttttaggcttttatgatgaaaatttgcgtttgtctatg 17574553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 49621323 - 49621228
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||| ||||||        |||||||||||||||||||| |||||||||    
T  49621323 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcttttatcttttttttgtcacgatttagtcctttatattataaaat 49621228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 22975680 - 22975594
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||         || |||||||||||||||||||||||||||    
T  22975680 cacaattagtcccttaactttattttaggtaacactttcgtcctttattttttttttgttacgatttagtcctttatgttataaaat 22975594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 33491749 - 33491692
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33491749 gcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatc 33491692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 55009434 - 55009386
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55009434 cacaattagtcccttaactttattttaagtaacactttcgtcctttatc 55009386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 3612870 - 3612759
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcatttttt--atgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagattt 338  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||  ||||||       ||| |||||||||||||||| ||| |||||||||||||||    
T  3612870 atttagtcctttatgttataaaatgaaactattttatcattttttttatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagattt 3612772  T
Q  339 acgtttgcctatg 351  Q
     |||||| |||||    
T  3612771 gcgtttgtctatg 3612759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 36230099 - 36230012
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  36230099 cacaattaatcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaat 36230012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 28830097 - 28830001
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||         |||||||||||||||| |||||||||||||    
T  28830097 gcaaaattacacaattagtcccttaactttattttagctaacactttcgtcctttatctttttttttgtcacgatttagtcctctatgttataaaat 28830001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 49711397 - 49711496
Alignment:
Q  164 attaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaa 263  Q
    |||| |||||||  ||||||||||| ||||||||||||||| ||||||||| |||||||||||         ||||||||||||| ||||||||||||||    
T  49711397 attaggcaaaattacacaattagtcccttaactttattttaggtaacacttacgtcctttatcttttttta-tcacgatttagtcatttatgttataaaa 49711495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 9296393 - 9296440
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  9296393 cacaattagtcccttaactttattttaggtaacactttcgtcctttat 9296440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 48433810 - 48433896
Alignment:
Q  180 caattagtctcttaactttattttaagtaacactttcgtcctttatc--nnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||          |||||||||||||||| |||||||||||||    
T  48433810 caattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctctatgttataaaat 48433896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 35850924 - 35850872
Alignment:
Q  239 cgatttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    |||||||||| ||||||||||||||||| |||| ||||||| |||||||||||    
T  35850924 cgatttagtcttttatgttataaaatgacaataccttatcactttttatgaga 35850872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 45279581 - 45279477
Alignment:
Q  187 tctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatcatttttta 286  Q
    |||||||| || |||||| ||||||||||||||||| |||        ||| | |||||||||||| |||||||||||||||| | ||||||  ||||||    
T  45279581 tctcttaatttaattttaggtaacactttcgtccttcatctttttttcgtcccaatttagtcctttttgttataaaatgataacaccttatcggttttta 45279482  T
Q  287 tgaga 291  Q
    |||||    
T  45279481 tgaga 45279477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 44506388 - 44506293
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  |||||||| || |||||||| |||||| |||||| |||||||||||||         || |||||||||||||||||||||||||||    
T  44506388 gcaaaattacacaattaatcccttaacttaattttaggtaacattttcgtcctttattatttttttgtaacgatttagtcctttatgttataaaat 44506293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 1341957 - 1342002
Alignment:
Q  239 cgatttagtcctttatgttataaaatgataatatcttatcattttt 284  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||    
T  1341957 cgatttattcctttatgttttaaaatgacaatatcttatcattttt 1342002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 12012782 - 12012831
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattttttatgag 290  Q
    |||||||| ||||||||||||||||  ||||| |||||||||||||||||    
T  12012782 atttagtcttttatgttataaaatgtcaatattttatcattttttatgag 12012831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 33491603 - 33491660
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||  ||||||||||  ||||||||||||||| |||||| ||||||||||||||    
T  33491603 gcaaaatgacacaattagttccttaactttattttaggtaacagtttcgtcctttatc 33491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 10687928 - 10687880
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    ||||||| |||||||||||| |||||| ||||||||||| |||||||||    
T  10687928 cacaattcgtctcttaacttaattttaggtaacactttcatcctttatc 10687880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 3612605 - 3612652
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    ||||||||||| |||||||| |||||| |||||| |||||||||||||    
T  3612605 cacaattagtcccttaacttaattttaggtaacattttcgtcctttat 3612652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 283
Target Start/End: Complemental strand, 43007029 - 43006987
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcatttt 283  Q
    |||||||  ||||||||||||||||| ||||||||||||||||    
T  43007029 atttagttttttatgttataaaatgacaatatcttatcatttt 43006987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 1342216 - 1342180
Alignment:
Q  190 cttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||| || |||||||||||||||||||||||||    
T  1342216 cttaacttaatattaagtaacactttcgtcctttatc 1342180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 7603660 - 7603616
Alignment:
Q  247 tcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    |||||||| ||||||||||  ||||||||||||| ||||||||||    
T  7603660 tcctttatattataaaatgtcaatatcttatcatattttatgaga 7603616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 7603719 - 7603683
Alignment:
Q  190 cttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  7603719 cttaacttaattttaagtaacacttttgtcctttatc 7603683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 23043193 - 23043241
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    |||||| |||| | |||||||| |||| |||||||||||||||||||||    
T  23043193 cacaataagtcccataactttactttaggtaacactttcgtcctttatc 23043241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 155 - 351
Target Start/End: Complemental strand, 3218499 - 3218304
Alignment:
Q  155 ataaataaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttat 254  Q
    |||||||||| || |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||    
T  3218499 ataaataaaaataggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttat 3218400  T
Q  255 gttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||| ||||||||||||||||| ||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3218399 gttataaaatgacaatatcttatcattttt-atgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 3218304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 3922883 - 3922701
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  3922883 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 3922784  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  3922783 atatcttatcattttttatgagatgtttttcaaagaaatttgattttatatgcgtgtatgatgaaaatttacgtttgcctatg 3922701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 167 - 351
Target Start/End: Original strand, 33595318 - 33595502
Alignment:
Q  167 aagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatga 266  Q
    |||||||||  ||||||||||| ||||||||||||||| |||||| |||||| |||||||        ||||||||||||||||||||||||||||||||    
T  33595318 aagcaaaattacacaattagtcccttaactttattttaggtaacattttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaatga 33595417  T
Q  267 taatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  33595418 caatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcctatg 33595502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 4242924 - 4243106
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  |||||||||||  |||| ||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  4242924 gcaaaattacacaattagtcctttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 4243023  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  4243024 atatcttatcattttttatgagatttttttcaaagaaatttgattttctagatttgtatgatgaagatttacgtttgcctatg 4243106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 165 - 346
Target Start/End: Original strand, 14763315 - 14763496
Alignment:
Q  165 ttaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||||||   ||||| |||| ||||||||||||||| ||||||||||||| |||||||        |||||| |||||||||||||||||||||||    
T  14763315 ttaagcaaaattatacaatcagtcccttaactttattttaggtaacactttcgtactttatcttttttttgtcacggtttagtcctttatgttataaaat 14763414  T
Q  265 gataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgc 346  Q
    || ||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||||||||||||||    
T  14763415 gacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 14763496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 23069040 - 23068860
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||| ||||||        |||||||||||||| ||||||||||||||||| |    
T  23069040 gcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcatttatcttttttt-gtcacgatttagtc-tttatgttataaaatgaca 23068943  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||    
T  23068942 atatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgttttcctatg 23068860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 6754984 - 6755100
Alignment:
Q  235 gtcacgatttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaag 334  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  6754984 gtcacgatttagtcctttatgttataaaatgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaag 6755083  T
Q  335 atttacgtttgcctatg 351  Q
    |||||||||||||||||    
T  6755084 atttacgtttgcctatg 6755100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 23068697 - 23068792
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  23068697 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 23068792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 33595664 - 33595569
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  33595664 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 33595569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 264
Target Start/End: Original strand, 3218151 - 3218247
Alignment:
Q  168 agcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  3218151 agcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaat 3218247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 4243267 - 4243172
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||| ||||||||||        ||||||||||||||||||||||||||||||    
T  4243267 gcaaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 4243172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 6755261 - 6755166
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||||||||||||||    
T  6755261 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaat 6755166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 3922540 - 3922634
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaa 263  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||| |||||||||||||||||||||    
T  3922540 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgaattagtcctttatgttataaaa 3922634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 345
Target Start/End: Complemental strand, 10810328 - 10810145
Alignment:
Q  161 aaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttata 260  Q
    ||||||| |||||||  |||||||||||  |||| || |||||| |||||||| | ||||||||||        ||||  |||||||| |||||| ||||    
T  10810328 aaaattaggcaaaattacacaattagtcctttaatttaattttaggtaacactcttgtcctttatcttttttttgtcattatttagtcttttatgatata 10810229  T
Q  261 aaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttg 345  Q
    |||||| ||||| |||| |||||||||||||       ||| |||||||||||||||| | ||||| ||| ||||||| ||||||    
T  10810228 aaatgacaatattttattattttttatgaga-ttttttcaatgaaatttgattttctagggttgtacgataaagatttgcgtttg 10810145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 14763652 - 14763555
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc--nnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||| ||||||||||||||||          |||||||||||||||||| |||||||||||    
T  14763652 gcaaaattacacaattagtcccttaactttattttaggtaagactttcgtcctttatcttttttttttgtcacgatttagtcctttttgttataaaat 14763555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 20491766 - 20491722
Alignment:
Q  239 cgatttagtcctttatgttataaaatgataatatcttatcatttt 283  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||    
T  20491766 cgatttaatcatttatgttataaaatgacaatatcttatcatttt 20491722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 7808923 - 7808874
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    ||||| || ||||||||| ||||||||||||| ||||||||||||||||||    
T  7808923 atttaatcatttatgtta-aaaatgataatattttatcattttttatgaga 7808874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 160 - 351
Target Start/End: Complemental strand, 30904713 - 30904523
Alignment:
Q  160 taaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttat 259  Q
    |||||||  |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||    
T  30904713 taaaatttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttt-gtcacgatttagtcctttatgttat 30904615  T
Q  260 aaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||| ||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30904614 aaaatgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 30904523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 2967871 - 2968054
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||        |||||||||||||||||||||||||||||||| |    
T  2967871 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcatttatcttatttttgtcacgatttagtcctttatgttataaaatgaca 2967970  T
Q  269 atatcttatca-ttttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||| ||||||||||||       ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  2967971 atatcttatcatttttttatgagatttttttcaaagaaatttgattttctatgcttctatgatgaagatttatgtttgcctatg 2968054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 27912096 - 27912279
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||||||| |     
T  27912096 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaattac 27912195  T
Q  268 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27912196 aatatcttatcattttttatgagattttttttaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcctatg 27912279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 27958515 - 27958698
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc-nnnnnnnngtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||||||| |     
T  27958515 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaattac 27958614  T
Q  268 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27958615 aatatcttatcattttttatgagattttttttaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcctatg 27958698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 35482703 - 35482885
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  35482703 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 35482802  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||||||||||||       |||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  35482803 atatcttatcattttttatgagatgtttttcaaagaaattcgattttatatgcgtgtatgatgaagatttacgtttgcctatg 35482885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 178 - 351
Target Start/End: Original strand, 17875778 - 17875951
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||    
T  17875778 cacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttat 17875877  T
Q  278 cattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||       ||||||||||| ||||||||  |||||||||||||||||| | ||||||||||    
T  17875878 cattttttatgagatttttttcaaagaaatttaattttctagacttgtatgatgaagatttgcatttgcctatg 17875951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 178 - 351
Target Start/End: Complemental strand, 10682396 - 10682222
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgataatatctta 276  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||          |||||||||||||||||||||||||||||||| |||||||||    
T  10682396 cacaattagtcccttaactttattttaggaaacactttcgtcctttatttttttttttgtcacgatttagtcctttatgttataaaatgacaatatctta 10682297  T
Q  277 tcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||| |||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10682296 tcattttttgtgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatg 10682222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 351
Target Start/End: Complemental strand, 17844216 - 17844045
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||         |||||||||||||| ||||||||||||||||| ||||| ||||    
T  17844216 cacaattagtcccttaacttaattttaggtaacactttcgtcctttatttattttttgtcacgatttagtc-tttatgttataaaatgacaatattttat 17844118  T
Q  278 cattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||| ||||||||       ||| ||||||||||||| || ||||||||||||||||||| |||||| |||||    
T  17844117 catttcttatgaga-ttttttcaatgaaatttgattttataggcttgtatgatgaagatttgcgtttgtctatg 17844045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 44379523 - 44379705
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  |||||||| || |||||||| |||||| |||||||||||||||||||||        || ||||||||||||||||||||||||||||| |    
T  44379523 gcaaaattacacaattaatcccttaacttaattttaggtaacactttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaatgaca 44379622  T
Q  269 atatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
     ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||    
T  44379623 ctattttatcatttttgtatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatttgcgtttgtctatg 44379705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 351
Target Start/End: Complemental strand, 13327598 - 13327425
Alignment:
Q  180 caattagtctcttaac--tttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttat 277  Q
    ||||||||| ||||||  || |||||| |||||||||||||| ||||||        ||||||||||| ||||||||| |||||||||||||||| ||||    
T  13327598 caattagtcccttaacaattaattttaggtaacactttcgtcttttatcttttttttgtcacgatttaatcctttatgatataaaatgataatattttat 13327499  T
Q  278 cattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||||||       |||  ||||||||||| ||| ||||||||||||||||||| | |||| |||||    
T  13327498 cattttttatgagatttttttcaataaaatttgatttgctaggcttgtatgatgaagatttgcatttgtctatg 13327425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 345
Target Start/End: Complemental strand, 23792924 - 23792749
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||||        || ||||||||||||||||||||||||||||| |    
T  23792924 gcaaaataacacaattagtcccttaacttaattttaggtaacacttttgtcctttatc-tttttttgtaacgatttagtcctttatgttataaaatgaca 23792826  T
Q  269 atatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttg 345  Q
     ||| ||||||||||| |||||||       ||| |||||||||||||||  ||| ||||||||||||||| ||||||    
T  23792825 ttattttatcatttttgtatgaga-ttttttcaatgaaatttgattttcttggctagtatgatgaagatttgcgtttg 23792749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 2968214 - 2968119
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  2968214 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 2968119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 20223176 - 20223288
Alignment:
Q  238 acgatttagtcctttatgttataaaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatt 337  Q
    ||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||       ||| |||||||||||||||| ||| ||||||||||||||    
T  20223176 acgatttagtcctttatattataaaatgacactattttatcattttttatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatt 20223274  T
Q  338 tacgtttgcctatg 351  Q
    |||||||| |||||    
T  20223275 tacgtttgtctatg 20223288  T

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Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 27912450 - 27912347
Alignment:
Q  161 aaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttata 260  Q
    ||||||| |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||| |||||||||||    
T  27912450 aaaattaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcatttatgttata 27912351  T
Q  261 aaat 264  Q
    ||||    
T  27912350 aaat 27912347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 27958869 - 27958766
Alignment:
Q  161 aaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttata 260  Q
    ||||||| |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||| |||||||||||    
T  27958869 aaaattaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcatttatgttata 27958770  T
Q  261 aaat 264  Q
    ||||    
T  27958769 aaat 27958766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 179 - 351
Target Start/End: Original strand, 4128752 - 4128924
Alignment:
Q  179 acaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatc 278  Q
    ||||||||||  |||| || |||||| |||||||||||||||||||||         | ||||||||||||||||||||||||||||| | ||| |||||    
T  4128752 acaattagtcctttaatttaattttaggtaacactttcgtcctttatcttctttttttaacgatttagtcctttatgttataaaatgaaactattttatc 4128851  T
Q  279 a-ttttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    | ||||||||||||       ||| ||||||||||||||||  || ||||||||||||||| |||||| |||||    
T  4128852 atttttttatgaga-ttttttcaatgaaatttgattttctagactagtatgatgaagatttgcgtttgtctatg 4128924  T

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Target: chr8; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 17876114 - 17876019
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        |||||||||||||||| |||||||||||||    
T  17876114 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctctatgttataaaat 17876019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 30928657 - 30928476
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc---nnnnnnnngtcacgatttagtcctttatgttataaaatg 265  Q
    |||||||  ||||||||||| |||||||| |||||| |||||||||||||||||||||           || ||||||||||||||||||||||||||||    
T  30928657 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatctttttttttttgtaacgatttagtcctttatgttataaaatg 30928558  T
Q  266 ataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    | | ||| ||||||   |||||||||       ||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||    
T  30928557 acactattttatca---tttatgaga-ttttttcaatgaaatttgattttctaggctggtatgatgaagatttgcgtttgtctatg 30928476  T

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Target: chr8; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 35483046 - 35482951
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||        ||||| ||||||||||||||||||||||||    
T  35483046 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacaatttagtcctttatgttataaaat 35482951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 351
Target Start/End: Original strand, 3691583 - 3691766
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnn-gtcacgatttagtcctttatgttataaaatgat 267  Q
    |||||||  ||||||||||| |||||| | |||||| |||||||||||||||||||||         || |||||||||||||||||||||||||||||     
T  3691583 gcaaaattacacaattagtcccttaacataattttaggtaacactttcgtcctttatctttttttttgtaacgatttagtcctttatgttataaaatgac 3691682  T
Q  268 aatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    | ||| ||||||||||| |||||||       ||| ||||||| |||||||| ||| |||||||||||||||  ||||| |||||    
T  3691683 actattttatcatttttgtatgaga-ttttttcaatgaaatttaattttctaggctagtatgatgaagatttgtgtttgtctatg 3691766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 38464711 - 38464763
Alignment:
Q  239 cgatttagtcctttatgttataaaatgataatatcttatcattttttatgaga 291  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38464711 cgatttagtcctttatgttataaaatgacaatatcttatcattttttatgaga 38464763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 30904362 - 30904457
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  |||||||| || ||||||||||||||| |||||||||||||||||||||        |||| |||||||||||||||||||||||||    
T  30904362 gcaaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcaggatttagtcctttatgttataaaat 30904457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 27523299 - 27523118
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgata 268  Q
    |||||||  ||||||| |||  ||||||| ||||||  |||||||||| ||||||||         ||| |||||||||||||||||||||||||||| |    
T  27523299 gcaaaattacacaattcgtcctttaacttaattttagttaacactttcatcctttatatttttcttgtcccgatttagtcctttatgttataaaatgaca 27523200  T
Q  269 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||||||| |||||  ||||       ||| ||||||||||||||||  ||||||||||||| ||||  ||||| |||||    
T  27523199 atatcttatcaatttttccgaga-gtttttcaatgaaatttgattttctagacttgtatgatgaaaatttgtgtttgtctatg 27523118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 42123977 - 42123864
Alignment:
Q  238 acgatttagtcctttatgttataaaatgataatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagat 336  Q
    ||||||||||||||||||||||||||||| | ||| ||||||||||| |||||||       ||| |||||||||||||||| ||| ||||||||||| |    
T  42123977 acgatttagtcctttatgttataaaatgacactattttatcatttttgtatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaaggt 42123879  T
Q  337 ttacgtttgcctatg 351  Q
    || |||||| |||||    
T  42123878 ttgcgtttgtctatg 42123864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 10682062 - 10682156
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  |||||||| || ||||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||||||||||||||    
T  10682062 gcaaaattacacaattaatcccttaactttattttaggtaacactttcgttctttatc-ttttttagtcacgatttagtcctttatgttataaaat 10682156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 14577210 - 14577113
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatc--nnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||          |||||||||||||||| |||||||||||||    
T  14577210 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctctatgttataaaat 14577113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 7899830 - 7899943
Alignment:
Q  238 acgatttagtcctttatgttataaaatgataatatcttatca-ttttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagat 336  Q
    ||||||||||||||||||||||||||||| | ||| |||||| ||||||||||||       |||  ||||||||||||||| ||| ||||||||| |||    
T  7899830 acgatttagtcctttatgttataaaatgacactattttatcatttttttatgaga-ttttttcaataaaatttgattttctaggctagtatgatgacgat 7899928  T
Q  337 ttacgtttgcctatg 351  Q
    || |||||| |||||    
T  7899929 ttgcgtttgtctatg 7899943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 20178372 - 20178428
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    |||||||  ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  20178372 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 20178428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 20223100 - 20223156
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    |||||||  ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  20223100 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 20223156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 31231360 - 31231317
Alignment:
Q  241 atttagtcctttatgttataaaatgataatatcttatcattttt 284  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  31231360 atttagtcctttatgttataaaataacaatatcttatcattttt 31231317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 38464957 - 38464887
Alignment:
Q  194 actttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    ||||||||||| |||||||||||||||||||||        ||| |||||||||| |||||||||||||||    
T  38464957 actttattttaggtaacactttcgtcctttatcttttttttgtcccgatttagtcttttatgttataaaat 38464887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 42685087 - 42685044
Alignment:
Q  183 ttagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  42685087 ttagtctcttaacttaattttaagtaacaatttggtcctttatc 42685044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 351
Target Start/End: Original strand, 14577010 - 14577048
Alignment:
Q  313 tttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  14577010 tttctaggcttgtatgatgaagatttgcgtttgcctatg 14577048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 13327263 - 13327319
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttat 225  Q
    |||||||  ||||||||||  |||||||| |||||| ||||||||||| ||||||||    
T  13327263 gcaaaattacacaattagttccttaacttaattttaggtaacactttcatcctttat 13327319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 17843890 - 17843938
Alignment:
Q  178 cacaattagtctcttaactttattttaagtaacactttcgtcctttatc 226  Q
    ||||||| |||| ||||||| |||||||||| || ||||||||||||||    
T  17843890 cacaattggtcttttaacttaattttaagtatcaatttcgtcctttatc 17843938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 163 - 350
Target Start/End: Complemental strand, 137264 - 137079
Alignment:
Q  163 aattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaa 262  Q
    ||||| |||||||  || ||||||||  || ||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  137264 aattaggcaaaattacataattagtccatttactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 137165  T
Q  263 atgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctat 350  Q
    |||| ||||||||||||||||||  ||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  137164 atgacaatatcttatcatttttt--gagatttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctat 137079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 136917 - 137012
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  136917 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 137012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 163 - 350
Target Start/End: Complemental strand, 330545 - 330360
Alignment:
Q  163 aattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaa 262  Q
    ||||| |||||||  || ||||||||  || ||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  330545 aattaggcaaaattacataattagtccatttactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 330446  T
Q  263 atgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctat 350  Q
    |||| ||||||||||||||||||  ||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  330445 atgacaatatcttatcatttttt--gagatttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctat 330360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 330198 - 330293
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaat 264  Q
    |||||||  ||||||||||| ||||||||||||||| |||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  330198 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 330293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 351
Target Start/End: Original strand, 12635 - 12780
Alignment:
Q  206 gtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaaatgataatatcttatcattttt-tatgagannnnnnncaaaga 304  Q
    |||||||||||||||||||||        || ||||||||||||||||||||||||||||| | ||| ||||||||||| |||||||       ||| ||    
T  12635 gtaacactttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaatgacactattttatcatttttgtatgaga-ttttttcaatga 12733  T
Q  305 aatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    |||||||||||||   || ||||||||||||||| |||||| |||||    
T  12734 aatttgattttcttgactagtatgatgaagatttgcgtttgtctatg 12780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 12947 - 12846
Alignment:
Q  163 aattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttataaa 262  Q
    ||||| |||||||  ||||||||||| |||||||| ||||||  ||||| ||||||||||||||        || |||||||||||||||||||||||||    
T  12947 aattaggcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaa 12848  T
Q  263 at 264  Q
    ||    
T  12847 at 12846  T

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Target: scaffold1577 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 351
Target Start/End: Complemental strand, 1224 - 1035
Alignment:
Q  161 aaaattaagcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtcctttatcnnnnnnnngtcacgatttagtcctttatgttata 260  Q
    ||||||| | |||||  |||||||||||  |||| || |||||| |||||||| |||| |||||||        |||||||||||||| |||||| ||||    
T  1224 aaaattaggtaaaattacacaattagtcctttaatttaattttaggtaacactctcgttctttatcttttttttgtcacgatttagtcttttatgatata 1125  T
Q  261 aaatgataatatcttatcattttttatgagannnnnnncaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatg 351  Q
    ||||||  |||| |||| |||||||||||||       ||| ||||| |||||||||| | ||||| ||| ||||||| |||||| |||||    
T  1124 aaatgactatattttattattttttatgaga-ttttttcaatgaaatgtgattttctagggttgtacgataaagatttgcgtttgtctatg 1035  T

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Target: scaffold0347 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 12278 - 12223
Alignment:
Q  169 gcaaaatagcacaattagtctcttaactttattttaagtaacactttcgtccttta 224  Q
    |||||||  ||||||||||| |||||||| |||||| |||||||||||||||||||    
T  12278 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtccttta 12223  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 15310 - 15263
Alignment:
Q  240 gatttagtcctttatgttataaaatgataatatcttatcattttttat 287  Q
    |||||||| |||||||||||||||||| ||| |||||| |||||||||    
T  15310 gatttagttctttatgttataaaatgacaatttcttataattttttat 15263  T

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