View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18068_low_70 (Length: 328)
Name: NF18068_low_70
Description: NF18068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18068_low_70 |
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Alignment Details
Target: chr6 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 133 - 298
Target Start/End: Complemental strand, 6201265 - 6201100
Alignment:
| Q |
133 |
ctaaatctatactaaatcattttattcgtgtgtgttagacaaaacccaacaacaatacaaagatataaaagacaagaatgcattagtggtactacttgca |
232 |
Q |
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| T |
6201265 |
ctaaatctataccaaatcattttattcgtgtgtgttagacaaaacccaacaacaatacacagatataaaagacaagaatgcattagtggtactacttgca |
6201166 |
T |
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| Q |
233 |
aagtaagtcttatttaattttaagtacagtttcaaataaaatttatttaacaaatattcacaaatg |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6201165 |
aagtaagtcttatttaattttaagtacagtttcaaataaaatttatttaacaaatattcacaaatg |
6201100 |
T |
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