View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18068_low_82 (Length: 302)

Name: NF18068_low_82
Description: NF18068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18068_low_82
NF18068_low_82
[»] chr2 (51 HSPs)
chr2 (3-110)||(33452189-33452296)
chr2 (3-85)||(42894677-42894759)
chr2 (3-88)||(25217543-25217628)
chr2 (3-88)||(44465509-44465594)
chr2 (3-85)||(17474570-17474652)
chr2 (10-110)||(38308572-38308679)
chr2 (10-88)||(27670803-27670881)
chr2 (10-88)||(34517410-34517488)
chr2 (10-88)||(41854672-41854750)
chr2 (12-88)||(17133034-17133110)
chr2 (20-88)||(39447474-39447542)
chr2 (15-110)||(11457264-11457358)
chr2 (34-85)||(16750216-16750267)
chr2 (225-283)||(4268185-4268243)
chr2 (20-86)||(15994890-15994956)
chr2 (10-84)||(38065350-38065424)
chr2 (10-88)||(41202958-41203036)
chr2 (40-88)||(5507757-5507805)
chr2 (30-85)||(32187656-32187711)
chr2 (225-283)||(8450827-8450885)
chr2 (225-283)||(33452026-33452084)
chr2 (225-283)||(38065142-38065200)
chr2 (3-85)||(41510201-41510283)
chr2 (225-283)||(42894909-42894967)
chr2 (20-81)||(30763967-30764028)
chr2 (50-103)||(41204267-41204320)
chr2 (225-283)||(17474359-17474417)
chr2 (12-78)||(25715770-25715835)
chr2 (225-283)||(32187448-32187506)
chr2 (23-85)||(33440282-33440344)
chr2 (225-283)||(41509997-41510055)
chr2 (225-283)||(44465318-44465376)
chr2 (65-110)||(19109768-19109813)
chr2 (225-282)||(27671034-27671091)
chr2 (12-88)||(9847075-9847150)
chr2 (40-84)||(35251269-35251313)
chr2 (228-283)||(45153469-45153524)
chr2 (41-110)||(8388980-8389056)
chr2 (225-283)||(36948690-36948748)
chr2 (39-85)||(36948805-36948851)
chr2 (225-283)||(38308409-38308467)
chr2 (39-88)||(42604795-42604844)
chr2 (80-110)||(5507814-5507844)
chr2 (33-83)||(27900387-27900437)
chr2 (80-110)||(34517500-34517530)
chr2 (80-110)||(42894772-42894802)
chr2 (12-85)||(9847286-9847358)
chr2 (12-88)||(12885271-12885347)
chr2 (225-257)||(34517643-34517675)
chr2 (225-257)||(41854485-41854517)
chr2 (12-84)||(45293938-45294010)
[»] chr6 (42 HSPs)
chr6 (13-102)||(21514791-21514880)
chr6 (15-88)||(237110-237183)
chr6 (3-88)||(2812996-2813081)
chr6 (3-88)||(4508076-4508161)
chr6 (3-88)||(5639161-5639246)
chr6 (45-110)||(29630716-29630781)
chr6 (3-91)||(17264709-17264797)
chr6 (3-88)||(2539751-2539836)
chr6 (3-88)||(3717056-3717141)
chr6 (30-88)||(5699925-5699983)
chr6 (30-88)||(9905390-9905448)
chr6 (3-88)||(14587335-14587420)
chr6 (10-85)||(24604138-24604213)
chr6 (42-88)||(7416125-7416171)
chr6 (225-283)||(7423440-7423498)
chr6 (225-283)||(13096696-13096754)
chr6 (30-85)||(1945359-1945414)
chr6 (38-85)||(16450553-16450600)
chr6 (42-88)||(7413106-7413152)
chr6 (225-283)||(9905593-9905651)
chr6 (229-283)||(17264955-17265009)
chr6 (225-283)||(33413205-33413263)
chr6 (225-281)||(5639633-5639689)
chr6 (225-281)||(7416315-7416371)
chr6 (44-88)||(7423240-7423284)
chr6 (225-265)||(24603951-24603991)
chr6 (3-86)||(3365959-3366042)
chr6 (39-88)||(29519611-29519661)
chr6 (225-283)||(32044752-32044810)
chr6 (53-85)||(29289469-29289501)
chr6 (225-260)||(2539983-2540018)
chr6 (80-110)||(2539845-2539875)
chr6 (225-283)||(3716863-3716921)
chr6 (43-85)||(8120153-8120195)
chr6 (80-110)||(17264808-17264838)
chr6 (225-283)||(23407276-23407334)
chr6 (80-110)||(29289430-29289460)
chr6 (225-282)||(4655429-4655486)
chr6 (225-282)||(13799107-13799164)
chr6 (12-85)||(17501297-17501369)
chr6 (225-281)||(14037542-14037598)
chr6 (225-265)||(14587147-14587187)
[»] chr4 (76 HSPs)
chr4 (3-110)||(48318816-48318923)
chr4 (3-110)||(38417099-38417205)
chr4 (3-85)||(25752220-25752302)
chr4 (3-85)||(7931964-7932046)
chr4 (3-88)||(38536479-38536564)
chr4 (3-87)||(46440047-46440131)
chr4 (10-109)||(8106709-8106808)
chr4 (10-85)||(19835835-19835910)
chr4 (10-85)||(25538755-25538830)
chr4 (10-83)||(6228592-6228665)
chr4 (3-88)||(18050963-18051048)
chr4 (3-88)||(25491169-25491254)
chr4 (3-88)||(29822888-29822973)
chr4 (3-88)||(34973172-34973257)
chr4 (3-88)||(40703972-40704057)
chr4 (3-88)||(54631266-54631351)
chr4 (4-88)||(53893800-53893884)
chr4 (17-88)||(37222286-37222357)
chr4 (22-88)||(14473989-14474055)
chr4 (3-85)||(17932914-17932996)
chr4 (10-76)||(49001341-49001407)
chr4 (42-85)||(31582207-31582250)
chr4 (10-88)||(3703029-3703107)
chr4 (42-88)||(20083317-20083363)
chr4 (225-283)||(46439854-46439912)
chr4 (3-69)||(52089562-52089628)
chr4 (3-91)||(2505801-2505890)
chr4 (39-88)||(32601182-32601231)
chr4 (19-88)||(48629340-48629409)
chr4 (53-110)||(55052429-55052486)
chr4 (30-88)||(6003447-6003505)
chr4 (225-283)||(7932143-7932201)
chr4 (225-283)||(8106920-8106978)
chr4 (225-283)||(17932708-17932766)
chr4 (225-283)||(25490953-25491011)
chr4 (225-283)||(25752018-25752076)
chr4 (225-283)||(53893589-53893647)
chr4 (12-85)||(4936499-4936572)
chr4 (39-88)||(5803202-5803251)
chr4 (3-88)||(23524095-23524180)
chr4 (12-85)||(42497712-42497785)
chr4 (230-283)||(47874262-47874315)
chr4 (3-88)||(49397319-49397404)
chr4 (42-85)||(47072334-47072377)
chr4 (225-264)||(48318672-48318711)
chr4 (236-283)||(54631061-54631108)
chr4 (225-283)||(3702827-3702885)
chr4 (225-283)||(6228386-6228444)
chr4 (14-76)||(27741899-27741961)
chr4 (225-283)||(40704471-40704529)
chr4 (225-283)||(41412785-41412843)
chr4 (225-283)||(55052257-55052315)
chr4 (20-85)||(41322870-41322934)
chr4 (40-85)||(47784338-47784383)
chr4 (20-85)||(48095639-48095704)
chr4 (30-85)||(5043641-5043696)
chr4 (30-85)||(39118482-39118537)
chr4 (225-283)||(2505599-2505657)
chr4 (80-110)||(3702984-3703014)
chr4 (225-283)||(27631938-27631996)
chr4 (80-110)||(29822982-29823012)
chr4 (80-110)||(31582172-31582202)
chr4 (225-283)||(34973399-34973457)
chr4 (225-283)||(38536719-38536777)
chr4 (40-74)||(47456950-47456984)
chr4 (80-110)||(47874119-47874149)
chr4 (80-110)||(54631225-54631255)
chr4 (12-81)||(372238-372307)
chr4 (12-85)||(25140586-25140658)
chr4 (225-282)||(49001129-49001186)
chr4 (80-108)||(13509463-13509491)
chr4 (46-110)||(20517561-20517624)
chr4 (80-108)||(25491128-25491156)
chr4 (225-265)||(27741740-27741780)
chr4 (242-282)||(42340196-42340236)
chr4 (30-74)||(53836072-53836116)
[»] chr1 (61 HSPs)
chr1 (3-102)||(45046610-45046709)
chr1 (23-110)||(49677783-49677870)
chr1 (3-88)||(42546268-42546352)
chr1 (20-110)||(41584332-41584423)
chr1 (3-88)||(18583318-18583403)
chr1 (11-88)||(28866404-28866481)
chr1 (3-85)||(41584442-41584524)
chr1 (39-88)||(40650478-40650527)
chr1 (3-88)||(49786568-49786653)
chr1 (3-88)||(52744617-52744702)
chr1 (12-84)||(9445967-9446038)
chr1 (20-88)||(27795147-27795215)
chr1 (10-85)||(6223530-6223604)
chr1 (10-85)||(40907711-40907786)
chr1 (22-88)||(38885532-38885598)
chr1 (225-283)||(44572678-44572736)
chr1 (12-85)||(24472605-24472678)
chr1 (12-78)||(800677-800742)
chr1 (225-283)||(32817377-32817435)
chr1 (52-110)||(34162532-34162590)
chr1 (10-85)||(34006568-34006642)
chr1 (23-85)||(33611187-33611249)
chr1 (225-283)||(40650275-40650333)
chr1 (225-283)||(45567472-45567530)
chr1 (225-283)||(49677977-49678035)
chr1 (225-283)||(52744426-52744484)
chr1 (53-102)||(17000670-17000719)
chr1 (3-88)||(23443038-23443123)
chr1 (225-281)||(34006797-34006853)
chr1 (229-281)||(40907502-40907554)
chr1 (225-283)||(18583115-18583173)
chr1 (225-283)||(32542744-32542802)
chr1 (225-283)||(41584169-41584227)
chr1 (30-88)||(42929208-42929266)
chr1 (3-77)||(44572885-44572959)
chr1 (225-283)||(44937860-44937918)
chr1 (20-85)||(8704295-8704360)
chr1 (12-85)||(43319062-43319134)
chr1 (229-265)||(27795346-27795382)
chr1 (41-88)||(3561109-3561156)
chr1 (39-82)||(38131221-38131264)
chr1 (30-85)||(44037191-44037246)
chr1 (225-283)||(667190-667248)
chr1 (225-283)||(4615413-4615471)
chr1 (39-85)||(6099718-6099764)
chr1 (39-85)||(6099898-6099944)
chr1 (225-283)||(17000843-17000901)
chr1 (225-283)||(23443263-23443321)
chr1 (20-74)||(27400069-27400123)
chr1 (80-110)||(38885603-38885633)
chr1 (80-110)||(42546362-42546392)
chr1 (80-110)||(45567643-45567673)
chr1 (81-110)||(3561067-3561096)
chr1 (225-282)||(24472400-24472457)
chr1 (242-283)||(42546479-42546520)
chr1 (47-88)||(44938073-44938114)
chr1 (81-110)||(52744574-52744603)
chr1 (39-83)||(11384305-11384349)
chr1 (80-108)||(24472562-24472590)
chr1 (225-281)||(34162361-34162417)
chr1 (80-108)||(40907669-40907697)
[»] chr5 (64 HSPs)
chr5 (3-110)||(39525038-39525145)
chr5 (3-87)||(14112127-14112211)
chr5 (3-110)||(37183528-37183640)
chr5 (3-85)||(6156993-6157075)
chr5 (3-88)||(26898577-26898662)
chr5 (3-88)||(31928899-31928984)
chr5 (10-85)||(32841748-32841823)
chr5 (3-87)||(38692557-38692642)
chr5 (10-88)||(26190096-26190174)
chr5 (11-88)||(31221114-31221190)
chr5 (12-101)||(41253577-41253666)
chr5 (12-88)||(11185961-11186037)
chr5 (10-85)||(33487880-33487955)
chr5 (42-88)||(27158385-27158431)
chr5 (10-84)||(27212972-27213046)
chr5 (12-85)||(5456327-5456400)
chr5 (3-88)||(7884456-7884541)
chr5 (21-85)||(40619762-40619826)
chr5 (13-84)||(26093731-26093802)
chr5 (225-283)||(7884694-7884752)
chr5 (10-88)||(20891881-20891959)
chr5 (3-85)||(38372563-38372645)
chr5 (225-283)||(38692363-38692421)
chr5 (53-110)||(4064530-4064587)
chr5 (3-88)||(12464892-12464977)
chr5 (12-85)||(16429250-16429323)
chr5 (12-85)||(21070636-21070709)
chr5 (12-77)||(28445284-28445348)
chr5 (39-85)||(15799523-15799569)
chr5 (225-283)||(15799726-15799784)
chr5 (3-85)||(15958011-15958093)
chr5 (39-85)||(18515104-18515150)
chr5 (225-283)||(31220908-31220966)
chr5 (20-78)||(33331420-33331478)
chr5 (225-283)||(38872151-38872209)
chr5 (17-84)||(26622394-26622461)
chr5 (225-283)||(4064365-4064423)
chr5 (39-77)||(6800725-6800763)
chr5 (225-283)||(12464675-12464733)
chr5 (225-283)||(26189886-26189944)
chr5 (225-283)||(26898366-26898424)
chr5 (225-283)||(31928695-31928753)
chr5 (229-283)||(32841544-32841598)
chr5 (225-283)||(33488104-33488162)
chr5 (225-283)||(37183357-37183415)
chr5 (12-78)||(43387944-43388009)
chr5 (12-65)||(8739079-8739132)
chr5 (47-88)||(38640938-38640979)
chr5 (44-84)||(5247276-5247316)
chr5 (225-281)||(6800519-6800575)
chr5 (45-81)||(28083157-28083193)
chr5 (225-265)||(40619572-40619612)
chr5 (30-85)||(19027338-19027393)
chr5 (42-88)||(5535204-5535250)
chr5 (80-110)||(20891970-20892000)
chr5 (225-283)||(20892106-20892164)
chr5 (38-88)||(26095367-26095417)
chr5 (39-85)||(28624357-28624403)
chr5 (225-283)||(29863053-29863111)
chr5 (80-110)||(33487968-33487998)
chr5 (36-78)||(34530208-34530249)
chr5 (225-283)||(38372800-38372858)
chr5 (39-77)||(42289754-42289792)
chr5 (55-87)||(12847717-12847749)
[»] chr8 (50 HSPs)
chr8 (3-88)||(8885226-8885311)
chr8 (3-85)||(42280668-42280750)
chr8 (3-85)||(11698093-11698175)
chr8 (12-84)||(7981825-7981897)
chr8 (3-86)||(28917075-28917158)
chr8 (13-87)||(40994980-40995054)
chr8 (3-87)||(3094985-3095069)
chr8 (3-110)||(34853628-34853742)
chr8 (12-84)||(36980878-36980950)
chr8 (3-88)||(31519668-31519751)
chr8 (39-103)||(32504095-32504159)
chr8 (225-283)||(8885021-8885079)
chr8 (225-283)||(11697888-11697946)
chr8 (225-283)||(42280470-42280528)
chr8 (12-85)||(31234598-31234672)
chr8 (12-84)||(33472286-33472358)
chr8 (30-85)||(4259459-4259514)
chr8 (225-283)||(9074061-9074119)
chr8 (10-88)||(10840527-10840605)
chr8 (225-283)||(21004849-21004907)
chr8 (225-283)||(27927521-27927579)
chr8 (225-283)||(28917311-28917369)
chr8 (225-283)||(40995190-40995248)
chr8 (12-85)||(10833386-10833458)
chr8 (12-85)||(24627789-24627861)
chr8 (12-85)||(24627998-24628070)
chr8 (12-88)||(36318105-36318181)
chr8 (30-85)||(27927727-27927782)
chr8 (225-283)||(3095221-3095279)
chr8 (39-85)||(9073855-9073901)
chr8 (225-283)||(11698602-11698660)
chr8 (225-283)||(14163619-14163677)
chr8 (30-88)||(14163831-14163889)
chr8 (225-283)||(21594312-21594370)
chr8 (225-283)||(44106747-44106805)
chr8 (20-85)||(6395401-6395466)
chr8 (225-282)||(10840314-10840371)
chr8 (51-88)||(11698445-11698482)
chr8 (46-87)||(17119655-17119696)
chr8 (225-282)||(36407274-36407331)
chr8 (30-87)||(40328225-40328281)
chr8 (228-280)||(17119444-17119496)
chr8 (24-88)||(27234597-27234661)
chr8 (45-88)||(28219004-28219047)
chr8 (79-110)||(44106611-44106642)
chr8 (225-263)||(40328437-40328475)
chr8 (225-258)||(31519482-31519515)
chr8 (12-85)||(41530891-41530963)
chr8 (81-109)||(3095085-3095113)
chr8 (80-108)||(36980963-36980991)
[»] chr7 (55 HSPs)
chr7 (3-88)||(42925414-42925499)
chr7 (3-85)||(9152091-9152173)
chr7 (3-85)||(37518040-37518122)
chr7 (10-88)||(19225372-19225450)
chr7 (12-110)||(36468291-36468389)
chr7 (3-88)||(47202787-47202872)
chr7 (10-88)||(31985291-31985369)
chr7 (3-88)||(43737382-43737467)
chr7 (12-85)||(7115046-7115119)
chr7 (3-88)||(19818680-19818764)
chr7 (3-88)||(31643340-31643425)
chr7 (25-88)||(24041971-24042034)
chr7 (21-88)||(33573822-33573889)
chr7 (3-85)||(42864878-42864961)
chr7 (12-75)||(43186094-43186157)
chr7 (15-86)||(48705775-48705846)
chr7 (3-85)||(3304528-3304610)
chr7 (10-84)||(8155206-8155280)
chr7 (225-283)||(36468119-36468177)
chr7 (3-85)||(36629503-36629585)
chr7 (14-79)||(8214377-8214442)
chr7 (12-85)||(16278322-16278395)
chr7 (39-88)||(26554937-26554986)
chr7 (12-78)||(5731063-5731128)
chr7 (225-283)||(37517833-37517891)
chr7 (225-282)||(26554734-26554791)
chr7 (39-88)||(28230266-28230315)
chr7 (39-85)||(6466914-6466960)
chr7 (225-283)||(31643577-31643635)
chr7 (225-283)||(36408886-36408944)
chr7 (225-283)||(36629736-36629794)
chr7 (225-283)||(47203017-47203075)
chr7 (225-282)||(8155428-8155485)
chr7 (19-84)||(30861399-30861464)
chr7 (12-88)||(32701034-32701110)
chr7 (39-85)||(1519050-1519096)
chr7 (225-283)||(19225168-19225226)
chr7 (225-283)||(24041760-24041818)
chr7 (225-283)||(42925208-42925266)
chr7 (225-283)||(43737621-43737679)
chr7 (225-282)||(30861603-30861660)
chr7 (42-110)||(36408702-36408776)
chr7 (19-88)||(47239492-47239561)
chr7 (235-283)||(6467873-6467921)
chr7 (54-85)||(37217509-37217540)
chr7 (80-110)||(1519109-1519139)
chr7 (225-283)||(3304316-3304374)
chr7 (225-283)||(28230057-28230115)
chr7 (80-110)||(36629600-36629630)
chr7 (80-110)||(43737476-43737506)
chr7 (81-110)||(19818774-19818803)
chr7 (225-282)||(31985113-31985170)
chr7 (3-56)||(33151502-33151555)
chr7 (24-76)||(24690122-24690174)
chr7 (80-108)||(42864835-42864863)
[»] chr3 (69 HSPs)
chr3 (47-110)||(39150146-39150209)
chr3 (3-110)||(46622547-46622654)
chr3 (3-110)||(3902551-3902665)
chr3 (3-88)||(34821117-34821202)
chr3 (3-88)||(35142373-35142458)
chr3 (10-88)||(28873313-28873391)
chr3 (10-88)||(47302326-47302404)
chr3 (10-84)||(51258711-51258785)
chr3 (3-88)||(2358396-2358481)
chr3 (3-86)||(3938482-3938565)
chr3 (3-88)||(4394279-4394364)
chr3 (12-84)||(29048639-29048711)
chr3 (14-85)||(500963-501034)
chr3 (3-85)||(51540404-51540486)
chr3 (20-110)||(51816531-51816621)
chr3 (12-85)||(45244606-45244678)
chr3 (3-88)||(50716553-50716638)
chr3 (3-88)||(50796209-50796294)
chr3 (20-88)||(14828690-14828758)
chr3 (20-88)||(35345683-35345751)
chr3 (5-76)||(3351852-3351923)
chr3 (10-85)||(33439494-33439569)
chr3 (47-105)||(21481395-21481453)
chr3 (20-78)||(43471466-43471524)
chr3 (225-283)||(47739507-47739565)
chr3 (3-68)||(43472762-43472827)
chr3 (41-85)||(30721611-30721655)
chr3 (20-88)||(34009868-34009936)
chr3 (225-281)||(51540200-51540256)
chr3 (225-276)||(33439706-33439757)
chr3 (225-283)||(2358184-2358242)
chr3 (11-88)||(38977521-38977599)
chr3 (30-88)||(41300937-41300995)
chr3 (225-283)||(49095780-49095838)
chr3 (39-84)||(49095995-49096040)
chr3 (39-110)||(47739679-47739756)
chr3 (39-85)||(29036140-29036186)
chr3 (225-283)||(39150312-39150370)
chr3 (225-283)||(41301434-41301492)
chr3 (225-283)||(50716781-50716839)
chr3 (225-283)||(50796008-50796066)
chr3 (49-86)||(43419905-43419942)
chr3 (47-88)||(47123328-47123369)
chr3 (47-88)||(47130694-47130735)
chr3 (13-85)||(4300054-4300125)
chr3 (40-84)||(11266573-11266617)
chr3 (44-88)||(47769603-47769647)
chr3 (236-283)||(3351631-3351678)
chr3 (225-283)||(41485865-41485921)
chr3 (45-88)||(41486058-41486101)
chr3 (225-283)||(46622373-46622429)
chr3 (80-110)||(3351795-3351825)
chr3 (80-110)||(8657511-8657541)
chr3 (225-279)||(8657655-8657709)
chr3 (19-85)||(19419734-19419800)
chr3 (225-283)||(26053308-26053366)
chr3 (80-110)||(35142467-35142497)
chr3 (80-110)||(47123378-47123408)
chr3 (80-110)||(47130744-47130774)
chr3 (80-110)||(49095952-49095982)
chr3 (80-110)||(50716647-50716677)
chr3 (80-110)||(50796170-50796200)
chr3 (80-110)||(51258799-51258829)
chr3 (80-109)||(35345645-35345674)
chr3 (12-61)||(45711886-45711935)
chr3 (12-88)||(8735402-8735476)
chr3 (12-88)||(9087643-9087717)
chr3 (225-281)||(14828491-14828547)
chr3 (225-265)||(28873537-28873577)
[»] scaffold0018 (2 HSPs)
scaffold0018 (3-87)||(174136-174220)
scaffold0018 (225-283)||(173931-173989)
[»] scaffold0508 (2 HSPs)
scaffold0508 (3-85)||(3170-3252)
scaffold0508 (225-280)||(2959-3014)
[»] scaffold0182 (1 HSPs)
scaffold0182 (30-88)||(23300-23358)
[»] scaffold0137 (1 HSPs)
scaffold0137 (11-82)||(9278-9348)
[»] scaffold0027 (3 HSPs)
scaffold0027 (39-85)||(141771-141817)
scaffold0027 (225-283)||(141566-141624)
scaffold0027 (82-110)||(141727-141755)
[»] scaffold0010 (1 HSPs)
scaffold0010 (3-77)||(140786-140860)
[»] scaffold0770 (3 HSPs)
scaffold0770 (225-283)||(4319-4377)
scaffold0770 (40-85)||(4122-4167)
scaffold0770 (81-110)||(4185-4214)
[»] scaffold0564 (2 HSPs)
scaffold0564 (23-77)||(4691-4745)
scaffold0564 (80-110)||(4774-4804)
[»] scaffold0029 (3 HSPs)
scaffold0029 (225-283)||(102623-102681)
scaffold0029 (40-85)||(102426-102471)
scaffold0029 (81-110)||(102489-102518)
[»] scaffold0016 (2 HSPs)
scaffold0016 (19-85)||(205887-205952)
scaffold0016 (12-89)||(205672-205748)
[»] scaffold0003 (1 HSPs)
scaffold0003 (225-281)||(421029-421085)


Alignment Details
Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 33452296 - 33452189
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||||| || ||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33452296 aaggaccatgactcccataaaagcgacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 33452197  T
Q  103 ccgaaaaa 110  Q
    ||||||||    
T  33452196 ccgaaaaa 33452189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 42894677 - 42894759
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  42894677 aaggaccatgactcccttagaaggaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 42894759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 25217628 - 25217543
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25217628 aaggaccatgactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagacccatttttcat 25217543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 44465594 - 44465509
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44465594 aaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcttttagacccatttttcat 44465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 17474652 - 17474570
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||||  | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  17474652 aaggaccatgactcccttagaagaaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 17474570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 38308679 - 38308572
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctcagaaaaat 102  Q
    ||||||||||||||||||| || |||   |||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||| |||||||    
T  38308679 atgactcccttagaagggaatttttattggactccgcccctcaaaatccaaaattccattgtttagacccttttttgatttttcatattctccgaaaaat 38308580  T
Q  103 ccgaaaaa 110  Q
    ||||||||    
T  38308579 ccgaaaaa 38308572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 27670803 - 27670881
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||| ||  |||||   |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27670803 atgactcccttagaagagacctcttatgggactccgcccctcaaaattcaaaattccatcgtttagacccatttttcat 27670881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 34517410 - 34517488
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| ||||||||| |||||||  || ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  34517410 atgactcccatagaagggacttcttacgggattccgcacctcaaaatccaaaattccatcgtttagaccaatttttcat 34517488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 41854750 - 41854672
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| || |||||||| | ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41854750 atgacaccattagaaggaacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 41854672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 17133034 - 17133110
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||| || || ||||  ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  17133034 gactcccttagaagagactttttacgggactccgaccctcaaaatccaaaatttcatcgtttagacccatttttcat 17133110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 39447474 - 39447542
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  39447474 tagaagggacttcttacgggactccgcccctcaaaatccaaaattacatcgtttagaccgatttttcat 39447542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 11457264 - 11457358
Alignment:
Q  15 tcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||| ||||||||| ||||||| |||||||| ||||||||||  |||||||||||||||||||| ||||||| || ||||| |||||| |||||||    
T  11457264 tcccatagaagggacttcttacgagactccgtccctcaaaatttaaaattccatcgtttagaccaatttttctta-tctcataaaaattcgaaaaa 11457358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 16750267 - 16750216
Alignment:
Q  34 tacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16750267 tacaggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 16750216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 4268243 - 4268185
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  4268243 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttgattatacataaga 4268185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 15994956 - 15994890
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    ||||| ||| |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  15994956 tagaatggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagacccatttttc 15994890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 38065424 - 38065350
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||  |||||| || |||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  38065424 atgactcctgtagaagagacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagacccatttt 38065350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 41203036 - 41202958
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| | |||||| || | |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  41203036 atgactctcgtagaagagactccttacaggactccgcccatcaaaatccaaaatttcatcgtttagacccatttttcat 41202958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 5507757 - 5507805
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5507757 actccgcccctcaaaatccaaaattccatcgtttagactcatttttcat 5507805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 32187711 - 32187656
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  32187711 ttcttacgggactccacccctcaaaatccaaaattccatcgtttagacccattttt 32187656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 8450827 - 8450885
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  8450827 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 8450885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 33452084 - 33452026
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  33452084 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 33452026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 38065200 - 38065142
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||    
T  38065200 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatagcagattatacataaga 38065142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 41510283 - 41510201
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||| ||||||||| | ||||||   |||||| ||||||||||||||||||| |||||||||||||| |||||    
T  41510283 aaggaccatgactctcttagaaggaacttcttatgggactccacccctcaaaatccaaaatttcatcgtttagaccccttttt 41510201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 42894909 - 42894967
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  42894909 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 42894967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 30763967 - 30764028
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccat 81  Q
    ||||||||| |||||||  |||||||||||||||||||||||||| |||||| |||||||||    
T  30763967 tagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtctagacccat 30764028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 41204267 - 41204320
Alignment:
Q  50 tcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatc 103  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  41204267 tcaaaatccaaaatttcatcgtttagactcatttttcatattctcataaaaatc 41204320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 17474417 - 17474359
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||| ||||    
T  17474417 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacacaaga 17474359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 25715770 - 25715835
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    |||||||||||||| |||||||||   |||||||||| |||||||||||||||||||| ||||||||    
T  25715770 gactcccttagaagagatttcttatgggactccgccc-tcaaaatccaaaattccatcatttagacc 25715835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 32187506 - 32187448
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || |||||||||||||||||||||   |||||||||||||||    
T  32187506 aaagcaaaactcaaaactgttgaaatgtgagagagtctgatggctgattatacataaga 32187448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 33440344 - 33440282
Alignment:
Q  23 aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||||  ||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  33440344 aagggacttcttacgggactccgcctctcaaaattcaaaattccatcgtttagatccattttt 33440282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 41510055 - 41509997
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||    
T  41510055 aaagcaaaattcaaaactgctgaaatgtgagagagtctgatgaatgattatacataaga 41509997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 44465376 - 44465318
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||| ||||   |||||||||||||||    
T  44465376 aaagcaaaactcaaaactgctgaaatgtgagagagtttgatggctgattatacataaga 44465318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 19109813 - 19109768
Alignment:
Q  65 ccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  19109813 ccatcgtttagacccatttttcatatttttagaaaaatccgaaaaa 19109768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 27671034 - 27671091
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    |||||||||||||||| ||||||||||||||||||||||||   ||||| ||||||||    
T  27671034 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatgactgattttacataag 27671091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 9847150 - 9847075
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||| || |||||||  |||||||| | |||||||||||||| ||||| ||||||||| ||||||||    
T  9847150 gactcccttagaagagacttcttacgggactccgctc-tcaaaatccaaaatcccatcatttagacccttttttcat 9847075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 35251269 - 35251313
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  35251269 actccgccccttaaaatccaaaatttcatcgtttagacccatttt 35251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 45153524 - 45153469
Alignment:
Q  228 gcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||||||| | ||||||||||||||||||||||   |||||||||||||||    
T  45153524 gcaaaactcaaaactactgaaatgtgagagagtctgatggctgattatacataaga 45153469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 8388980 - 8389056
Alignment:
Q  41 ctccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||| ||| ||||||||||||||||||||||||||||||       ||||||||||| |||| ||||||||||||||    
T  8388980 ctccacccttcaaaatccaaaattccatcgtttagacccaatttttatttttcatatactcaaaaaaatccgaaaaa 8389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 36948748 - 36948690
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || |||||||||||||| ||||||   |||||||||||||||    
T  36948748 aaagcaaaactcaaaactgttgaaatgtgagagattctgatggctgattatacataaga 36948690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 36948851 - 36948805
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  36948851 gactccgcccttcaaaatcctaaattccattgtttagacccattttt 36948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 38308467 - 38308409
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||| ||||||||||| ||||||||||||||||||| ||||   |||||||||||||||    
T  38308467 aaagaaaaactcaaaactgctgaaatgtgagagagtttgatgactgattatacataaga 38308409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 42604844 - 42604795
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| |||||||    
T  42604844 gacttcgccccttaaaatccaaaatttcatcgtttagacccacttttcat 42604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 5507814 - 5507844
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  5507814 atttttcatattctcagaaaaatccgaaaaa 5507844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 27900437 - 27900387
Alignment:
Q  33 ttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattt 83  Q
    |||| ||||||| ||||||| ||||||||||||||||||||| ||| ||||    
T  27900437 ttacgagactcctcccctcataatccaaaattccatcgtttaaacctattt 27900387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 34517500 - 34517530
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  34517500 atttttcatattctcagaaaaatccgaaaaa 34517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 42894772 - 42894802
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  42894772 atttttcatattctcagaaaaatccgaaaaa 42894802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 9847358 - 9847286
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||| ||||||||| || |||||||  ||||| |||| |||||||||||||||||||| |||| |||| |||||    
T  9847358 gacttccttagaagagacttcttacgggactctgccc-tcaaaatccaaaattccatcatttacaccctttttt 9847286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 12885347 - 12885271
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| ||||||  | |||||||  ||||||||||||||||| |||||||| || | | |||||| |||||||||    
T  12885347 gactcccgtagaagaaacttcttacgcgactccgcccctcaaaacccaaaatttcaacatatagaccgatttttcat 12885271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 257
Target Start/End: Original strand, 34517643 - 34517675
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagag 257  Q
    |||||||||||||||| ||||||||||||||||    
T  34517643 aaagcaaaactcaaaactgctgaaatgtgagag 34517675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 41854517 - 41854485
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagag 257  Q
    |||||||||||||||| ||||||||||||||||    
T  41854517 aaagcaaaactcaaaactgctgaaatgtgagag 41854485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 45293938 - 45294010
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| ||||||||| |||||    |||| | ||||||||||||||||||| ||||||||| ||| |||||    
T  45293938 gactcccctagaagggacttcttgttggacttcacccctcaaaatccaaaatttcatcgtttaaaccaatttt 45294010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 21514880 - 21514791
Alignment:
Q  13 actcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21514880 actcccttagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 21514791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 237110 - 237183
Alignment:
Q  15 tcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  237110 tcccttagaagggtcttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcat 237183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 2813081 - 2812996
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||| ||| ||||||   |||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  2813081 aaggaccatgactcccttagaatggacttcttatgggactccacccctcaaaatccaaaatttcatcgtttagacccatttttcat 2812996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 4508161 - 4508076
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||||  ||||| || ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4508161 aaggaccatgactcccacagaagagacttcttaagggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 4508076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 5639161 - 5639246
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||| ||||||| || |||||||  |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  5639161 aaggaccatgactcctttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttatatccatttttcat 5639246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 29630781 - 29630716
Alignment:
Q  45 gcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  29630781 gcccctcaaaatccaaaatttcatcgtttagactcatttttcatattctcagaaaaatccaaaaaa 29630716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 17264709 - 17264797
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatatt 91  Q
    |||||| ||||||||| ||||||||| |||||||  |||| || |||||||||||||||||| ||||||||||| ||||||||||||||    
T  17264709 aaggaccatgactcccctagaagggacttcttacgggacttcgtccctcaaaatccaaaatttcatcgtttagatccatttttcatatt 17264797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 2539751 - 2539836
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||| | |||||| || |||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  2539751 aaggaccatgactctcatagaagtgacttcttacgggactccgcccctcaaaatccaaaattcaatcgtttagactcatttttcat 2539836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 3717141 - 3717056
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||| ||||| |||||| || |||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  3717141 aaggaccatggctcccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccactgtttagacccatttttcat 3717056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 5699925 - 5699983
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5699925 ttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcat 5699983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 9905390 - 9905448
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9905390 ttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcat 9905448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 14587420 - 14587335
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| | ||||||||||||||| | |||||||  ||||||||| |||||||||||||||||||| ||||| || ||||||||||    
T  14587420 aaggaccaagactcccttagaaggaacttcttacgggactccgccactcaaaatccaaaattccattgtttaaactcatttttcat 14587335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 24604213 - 24604138
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||| ||||| |   |||||||| ||||||||||||||||||| ||||||||||| |||||    
T  24604213 atgactcccttagaagggacttcttgcggaactccgcctctcaaaatccaaaattccaccgtttagaccctttttt 24604138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 7416125 - 7416171
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7416125 tccgcccctcaaaatccaaaattcaatcgtttagacccatttttcat 7416171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 7423440 - 7423498
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || |||||||||||||||||||||  ||||||||||||||||    
T  7423440 aaagcaaaactcaaaactgttgaaatgtgagagagtctgatggttgattatacataaga 7423498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 13096696 - 13096754
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  13096696 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 13096754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 1945414 - 1945359
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  1945414 ttcttacgggactccgcccctcaaaatccaaaattccaacgtttagaccccttttt 1945359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 16450553 - 16450600
Alignment:
Q  38 agactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16450553 agactccgcccatcaaaatccaaaattccatcgtttagacctattttt 16450600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 7413106 - 7413152
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  7413106 tccgcccctcaaaatccaaaatttcatcgtttagacccattattcat 7413152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 9905593 - 9905651
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||| ||||||||||   |||||||||||||||    
T  9905593 aaagcaaaactcaaaactgctgaaatgtgaaagagtctgatggctgattatacataaga 9905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 17264955 - 17265009
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  17264955 caaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 17265009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 33413263 - 33413205
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||| ||||||||    
T  33413263 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattacacataaga 33413205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 5639633 - 5639689
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    |||||||||||||||| |||| |||||||||||||||||||   |||||||||||||    
T  5639633 aaagcaaaactcaaaactgctcaaatgtgagagagtctgatggctgattatacataa 5639689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 7416315 - 7416371
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    |||||||||||||||| ||||||||||||||||||| ||||   |||||||||||||    
T  7416315 aaagcaaaactcaaaactgctgaaatgtgagagagtatgatggctgattatacataa 7416371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 7423240 - 7423284
Alignment:
Q  44 cgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||||||| | ||||||||||||||||||||    
T  7423240 cgcccctcaaaatccaaaattcaaccgtttagacccatttttcat 7423284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 24603991 - 24603951
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgat 265  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  24603991 aaagcaaaactcaaaactgctgaaatgtgagagagtctgat 24603951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 3365959 - 3366042
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    ||||| || ||||||  |||||| || ||||||| |||||||| | ||||||||| |||||| |||||||||||| ||||||||    
T  3365959 aaggattaagactcctctagaagagacttcttacgagactccgtcgctcaaaatctaaaatttcatcgtttagactcatttttc 3366042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 29519611 - 29519661
Alignment:
Q  39 gactccgcccctcaaaatccaaaa-ttccatcgtttagacccatttttcat 88  Q
    |||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  29519611 gactcctcctctcaaaatccaaaaattccatcgtttagacccatttttcat 29519661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 32044752 - 32044810
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| | ||||||||||||||| ||||||   |||||||||||||||    
T  32044752 aaagcaaaactcaaaactactgaaatgtgagagattctgatggctgattatacataaga 32044810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 29289501 - 29289469
Alignment:
Q  53 aaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||||||||||||||||||||    
T  29289501 aaatccaaaattccatcgtttagacccattttt 29289469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 2539983 - 2540018
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagt 260  Q
    |||||||||||||||| |||||||||||||||||||    
T  2539983 aaagcaaaactcaaaactgctgaaatgtgagagagt 2540018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 2539845 - 2539875
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  2539845 atttttcatattctcagaaaaatccgaaaaa 2539875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 3716921 - 3716863
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||||||| ||||||||||   |||||||||||||||    
T  3716921 aaagcaaaactcaaaattgttaaaatgtgaaagagtctgatggctgattatacataaga 3716863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 8120195 - 8120153
Alignment:
Q  43 ccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||    
T  8120195 ccgcccctcaaaatccaaaattctatcatttagacctattttt 8120153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 17264808 - 17264838
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  17264808 atttttcatattctcagaaaaatccgaaaaa 17264838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 23407276 - 23407334
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||| ||||||||||||||   |||||||||||||||    
T  23407276 aaagcaaaactcaaaattgttaaaatatgagagagtctgatggctgattatacataaga 23407334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 29289460 - 29289430
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  29289460 atttttcatattctcagaaaaatccgaaaaa 29289430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 4655486 - 4655429
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||| |||||| |||||||||  |||||| |||||||  ||||||||||||||    
T  4655486 aaagcaaaattcaaaactgctgaaataggagagattctgatagctgattatacataag 4655429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 13799164 - 13799107
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||| |||||| ||||||||||| ||||| ||||||   ||||||||||||||    
T  13799164 aaagcaaaattcaaaactgctgaaatgtaagagattctgattgctgattatacataag 13799107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 17501297 - 17501369
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||||||| || ||||  |||||||||  ||||||||||||||| ||||||||| |||| |||||    
T  17501297 gactcctttagaagggactttttacgggactccgcca-tcaaaatccaaaatttcatcgtttacaccctttttt 17501369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 14037598 - 14037542
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    ||||||||| |||||| ||||||||| ||||||| ||||||   |||||||||||||    
T  14037598 aaagcaaaattcaaaactgctgaaatatgagagattctgattgctgattatacataa 14037542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 14587187 - 14587147
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgat 265  Q
    ||||||||| |||||| ||||||||||||| ||||||||||    
T  14587187 aaagcaaaattcaaaactgctgaaatgtgaaagagtctgat 14587147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 48318923 - 48318816
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||| | | ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48318923 aaggaccatgactctcctggaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattcacagaaaaat 48318824  T
Q  103 ccgaaaaa 110  Q
    | ||||||    
T  48318823 ctgaaaaa 48318816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 38417099 - 38417205
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||| | ||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  38417099 aaggaccatgactcacgtagaagggacttcttacaggactccgcccttcaaaatccaaaatttcatcgtttaga-ccatttttcatattctcataaaaat 38417197  T
Q  103 ccgaaaaa 110  Q
    ||||||||    
T  38417198 ccgaaaaa 38417205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 25752302 - 25752220
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  25752302 aaggaccatgactcccttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 25752220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 7931964 - 7932046
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  7931964 aaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacacattttt 7932046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 38536479 - 38536564
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| || ||||| |||||| ||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38536479 aaggaccataactcctttagaaaggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 38536564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 46440131 - 46440047
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| |||||||||  |||||||| |||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  46440131 aaggaccatgactcccaaagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagacacatttttca 46440047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 8106709 - 8106808
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaa 109  Q
    ||||||||| ||||||| | |||||||  ||||||||| ||||||||| ||||||  |||||||||| |||||||||||||||||| |||||||| ||||    
T  8106709 atgactcccgtagaaggaacttcttacgggactccgcctctcaaaatcaaaaattaaatcgtttagatccatttttcatattctcaaaaaaatccaaaaa 8106808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 19835835 - 19835910
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| || |||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  19835835 atgactcccctaaaagggacttcttacgggactccgcccctcaaaatccaaaattccattgtttagacccattttt 19835910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 25538830 - 25538755
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||| || |||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  25538830 atgactcccttagaagagacttcttacgggactccgcccctcaaaatccaaaataccatcgtttagacacattttt 25538755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 6228665 - 6228592
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattt 83  Q
    ||||||||| ||||||| | |||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  6228665 atgactcccgtagaaggaacttcttacaggactcctcccctcaaaatccaaaattccattgtttagacccattt 6228592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 18051048 - 18050963
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||| | || ||||  || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18051048 aaggaccatgactcccgtagaaggaactttttacgggattccgcccctcaaaatccaaaattccatcgtttagacccttttttcat 18050963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 25491254 - 25491169
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||||| |||| |   || |||| |||||||||||||||||||||||||||||||| |||||||||    
T  25491254 aaggaccatgactcccttagaagggacttctcaagggattccgtccctcaaaatccaaaattccatcgtttagaccaatttttcat 25491169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 29822888 - 29822973
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| ||| |||  ||||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  29822888 aaggaccatgactcccgtagaagggacttcctacgggactctgcccctcaaaattcaaaattccatcgtttagactcatttttcat 29822973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 34973172 - 34973257
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||| | || |||||| ||||| |  |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34973172 aaggaccatgactctcctaaaagggacttctttcgggactccgcccctcaaaatccaaaattccattgtttagacccatttttcat 34973257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 40703972 - 40704057
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||| | |||||||| | |||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  40703972 aaggaccatgacttcattagaaggaacttcttacgggactccgcccctcaaaatctaaaattccatcgtttaaacccatttttcat 40704057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 54631351 - 54631266
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||| ||| |||||||  |||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  54631351 aaggaccatgactcccatagaaaggacttcttacgggactccgcacctcaaaatacaaaattccatcgtttagaccaatttttcat 54631266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 53893884 - 53893800
Alignment:
Q  4 aggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| || |||||| ||||||||| ||||||   | |||||||||||||||||||||||| |||||||||||||||||||||||    
T  53893884 aggaccatcactcccgtagaagggacttcttatgggtctccgcccctcaaaatccaaaatttcatcgtttagacccatttttcat 53893800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 37222286 - 37222357
Alignment:
Q  17 ccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||| | ||||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||||    
T  37222286 ccttagaaggaacttcttacgagactcctcccctcaaaatccaaaattccaacgtttagacccttttttcat 37222357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 14474055 - 14473989
Alignment:
Q  22 gaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| |||||||  ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  14474055 gaagggacttcttacgggactccgcccctcaagatccaaaatttcatcgtttagacccatttttcat 14473989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 17932996 - 17932914
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||| | | ||||||  ||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  17932996 aaggaccatgactcccttagaaagaacttcttaagagattccgcctctcaaaatccaaaattccatagtttagacccattttt 17932914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 49001407 - 49001341
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttaga 76  Q
    ||||||||||||||||||| |||||||  |||||||| ||||||||||||||||| |||||||||||    
T  49001407 atgactcccttagaagggacttcttacgggactccgctcctcaaaatccaaaattacatcgtttaga 49001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 31582250 - 31582207
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31582250 tccgcccctcaaaatccaaaattccatcgtttagacccattttt 31582207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 3703107 - 3703029
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||  || ||||||   ||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  3703107 atgactcccttagaaatgacttcttatgggactccgtccttcaaaatccaaaattccatcgtttggacccatttttcat 3703029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 20083317 - 20083363
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  20083317 tccgctcctcaaaatccaaaattccatcgtttagacccatttttcat 20083363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 46439912 - 46439854
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  46439912 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 46439854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 52089562 - 52089628
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatc 69  Q
    |||||| || |||||| ||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  52089562 aaggaccataactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattccatc 52089628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 2505890 - 2505801
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-atttttcatatt 91  Q
    |||||| |||||||||  |||||||| |||||||  || || ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  2505890 aaggaccatgactccccaagaagggacttcttacgggattctgcccctcaaaatccaaaattctatcgtttacaccctatttttcatatt 2505801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 32601182 - 32601231
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  32601182 gactccgccgctcaaaatccaaaattccatcgtttagacctatttttcat 32601231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 48629409 - 48629340
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||||||| |||||||    
T  48629409 ttagaagggacttcttacgagattccgcccctcaaaatttaaaattccatcatttagacccaattttcat 48629340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 55052486 - 55052429
Alignment:
Q  53 aaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||    
T  55052486 aaatccaaaattcaatcgtctagacccatttttcatattcttagaaaaatccaaaaaa 55052429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 6003505 - 6003447
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  ||||||||||||||||||||||||||| || ||||||||| |||||||||    
T  6003505 ttcttacgggactccgcccctcaaaatccaaaattctattgtttagaccaatttttcat 6003447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 7932143 - 7932201
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||    
T  7932143 aaagcaaaattcaaaactgctgaaatgtgagagagtctgatgactgattatacataaga 7932201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 8106920 - 8106978
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||| ||||||    
T  8106920 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattataaataaga 8106978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 17932766 - 17932708
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||| ||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  17932766 aaagaaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 17932708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 25491011 - 25490953
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||||| |||| ||||||||||||||||||||||||   |||||||||||||||    
T  25491011 aaagcaaaacttaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 25490953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 25752076 - 25752018
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || |||||||||||||||||||||   |||||||||||||||    
T  25752076 aaagcaaaactcaaaactgttgaaatgtgagagagtctgatggctgattatacataaga 25752018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 53893647 - 53893589
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||| ||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  53893647 aaagcagaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 53893589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 4936572 - 4936499
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||  | ||||||   ||||||| |||||||||||||||||| |||| |||||||||||||||    
T  4936572 gactcccttagaagatacttcttatgggactccgtccctcaaaatccaaaatttcatcttttagacccattttt 4936499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 5803251 - 5803202
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  5803251 gactccaccccacaaaattcaaaattccatcgtttagacccatttttcat 5803202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 23524095 - 23524180
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||||  |||||||| || |||   |||| ||||||||||||||||||||| |||  ||||||||||||||||||    
T  23524095 aaggaccatgactcccgaagaagggacttattatgggacttcgcccctcaaaatccaaaatttcattatttagacccatttttcat 23524180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 42497785 - 42497712
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| | ||||||  |||||||| ||||||||||||||||||| |||||| ||| ||||||||| ||||||    
T  42497785 gactcccatggaaggggcttcttacaggactccgcccctcaaaatctaaaatttcattgtttagacctattttt 42497712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 47874262 - 47874315
Alignment:
Q  230 aaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||||| ||||||||| |||||||||||||||  |||||||||||||||    
T  47874262 aaaactcaaaactgctgaaatatgagagagtctgatagctgattatacataaga 47874315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 49397319 - 49397404
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||||| |||||  | ||||||   || || |||||||||||||||||||| ||| |||||||||||||||||||    
T  49397319 aaggaccatgactccctaagaagaaacttcttatgggattcggcccctcaaaatccaaaatttcattgtttagacccatttttcat 49397404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 47072334 - 47072377
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  47072334 tccgcccctcaaaatctaaaattccatcgtttagaccctttttt 47072377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 48318711 - 48318672
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctga 264  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  48318711 aaagcaaaactcaaaactgctgaaatgtgagagagtctga 48318672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 54631108 - 54631061
Alignment:
Q  236 caaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  54631108 caaaactgctgaaatgtgagagagtgtgatagttgattatacataaga 54631061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 3702885 - 3702827
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||| |||||||||||||||||||   ||||||| |||||||    
T  3702885 aaagcaaaactcaaaactgcttaaatgtgagagagtctgatggctgattatccataaga 3702827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 6228444 - 6228386
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||| | ||||   |||||||||||||||    
T  6228444 aaagcaaaactcaaaactgctgaaatgtgagagattatgatggctgattatacataaga 6228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 27741961 - 27741899
Alignment:
Q  14 ctcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttaga 76  Q
    ||||| ||||||| | ||||||   |||||||||||||||||||||||||||||| |||||||    
T  27741961 ctcccgtagaaggaacttcttatgggactccgcccctcaaaatccaaaattccattgtttaga 27741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 40704471 - 40704529
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || ||||||||| |||||||||||   |||||||||||||||    
T  40704471 aaagcaaaactcaaaactgttgaaatgtgggagagtctgatggctgattatacataaga 40704529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 41412843 - 41412785
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| | ||||||||||||||| ||||||   |||||||||||||||    
T  41412843 aaagcaaaactcaaaactactgaaatgtgagagattctgatggctgattatacataaga 41412785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 55052315 - 55052257
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||    
T  55052315 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatgactgattatacataaga 55052257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 41322934 - 41322870
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| || |||||||  || |||||||||||||||||| | |||||||||||||||||||||||    
T  41322934 tagaagagacttcttacgggattccgcccctcaaaatccata-ttccatcgtttagacccattttt 41322870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 47784338 - 47784383
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  47784338 actcctcccctcaaaatccaaaatttcatcgtttagaccaattttt 47784383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 48095704 - 48095639
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| ||||| |  |||||||||  ||||||||| ||||||||||| ||||||||||||||    
T  48095704 tagaagggacttcttgcgggactccgcctttcaaaatccgaaattccatcgattagacccattttt 48095639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 5043641 - 5043696
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||| | ||||||||||||||||||||| ||||||| || |||||||    
T  5043641 ttcttgcaagacttcacccctcaaaatccaaaattccttcgtttaaactcattttt 5043696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 39118482 - 39118537
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||| ||| || ||||| ||||||||||||| ||||||||||| ||||||||    
T  39118482 ttcttacatgacaccaccccttaaaatccaaaatttcatcgtttagaaccattttt 39118537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 2505657 - 2505599
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||| ||| || ||||||||||||||||||| ||||   |||||||||||||||    
T  2505657 aaagcaaaattcacaattgctgaaatgtgagagagtttgatggctgattatacataaga 2505599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 3703014 - 3702984
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  3703014 atttttcatattctcagaaaaatccgaaaaa 3702984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 27631996 - 27631938
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| | ||||||||||| ||| ||||||   |||||||||||||||    
T  27631996 aaagcaaaactcaaaactactgaaatgtgaaagattctgatggctgattatacataaga 27631938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 29822982 - 29823012
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  29822982 atttttcatattctcagaaaaatccgaaaaa 29823012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 31582202 - 31582172
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  31582202 atttttcatattctcagaaaaatccgaaaaa 31582172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 34973399 - 34973457
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |  |||||||||||||| ||||||   |||||||||||||||    
T  34973399 aaagcaaaactcaaaactattgaaatgtgagagattctgatggctgattatacataaga 34973457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 38536719 - 38536777
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | ||||||||||||||| |||   |||||||||||||||    
T  38536719 aaagcaaaactcaaaactgttaaaatgtgagagagtccgatgactgattatacataaga 38536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 47456950 - 47456984
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgttta 74  Q
    |||||| ||||||||||||||||||||||||||||    
T  47456950 actccgtccctcaaaatccaaaattccatcgttta 47456984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 47874119 - 47874149
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  47874119 atttttcatattctcagaaaaatccgaaaaa 47874149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 54631255 - 54631225
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  54631255 atttttcatattctcagaaaaatccgaaaaa 54631225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 372238 - 372307
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccat 81  Q
    |||| ||||| |||||| |||||||  |||||| ||||||||||| ||||||  ||||||||| ||||||    
T  372238 gacttccttataagggacttcttacgggactcctcccctcaaaattcaaaatatcatcgtttaaacccat 372307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 25140658 - 25140586
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||| | ||||| |  || ||||||  ||||||||||||||||||||||||| |||| |||||    
T  25140658 gactcccttagaaggaacttcttgcgggattccgcca-tcaaaatccaaaattccatcgtttacaccctttttt 25140586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 49001186 - 49001129
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||| |||||| |||| ||||||| |||| ||||||  |||||||||||||||    
T  49001186 aaagcaaaattcaaaactgctcaaatgtgtgagattctgattgttgattatacataag 49001129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 13509463 - 13509491
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  13509463 atttttcatattctcagaaaaatccgaaa 13509491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 20517624 - 20517561
Alignment:
Q  46 cccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||| ||| ||| |||||||| || ||||||||||||||||| | ||||||| ||||    
T  20517624 cccctcaaaatctaaatttc-atcgtttaaactcatttttcatattctcatacaaatccggaaaa 20517561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 25491156 - 25491128
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  25491156 atttttcatattctcagaaaaatccgaaa 25491128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 27741780 - 27741740
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgat 265  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  27741780 aaagaaaaactaaaaactgctgaaatgtgagagagtctgat 27741740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 42340236 - 42340196
Alignment:
Q  242 tgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||||| ||||||||||||  |||||||||||||||    
T  42340236 tgctgaaatgttagagagtctgatggttgattatacataag 42340196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 53836116 - 53836072
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgttta 74  Q
    |||||||  ||||||| ||||||||||||||||||| ||||||||    
T  53836116 ttcttacgggactccgtccctcaaaatccaaaattctatcgttta 53836072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 45046709 - 45046610
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  45046709 aaggaccatgactcccttagaagggacttcttatgagactccgcccctcaaaatccaaaattccatcgtttagatccattttttatattctcagaaaaat 45046610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 49677783 - 49677870
Alignment:
Q  23 aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||| |||||||  |||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  49677783 aagggacttcttacgggactccgcccctcaaaattcaaaattccatcgtttagactcatttttcatattcttagaaaaatccgaaaaa 49677870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 42546268 - 42546352
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||| | |||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42546268 aaggaccatgactcccttagaaggaacttcttacgggactccgccc-tcaaaatccaaaattccatcgtttagacccatttttcat 42546352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 41584423 - 41584332
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca-tattctcagaaaaatccgaaaaa 110  Q
    ||||||||| |||||||  ||||||||||||||||||| |||||||||| |||||||||||||||||| | || ||||||||||||||||||    
T  41584423 tagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagacccatttttcatttttttcagaaaaatccgaaaaa 41584332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 18583403 - 18583318
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| | ||||||| |||||| || |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18583403 aaggaccacgactcccatagaagagacttcttacgggactccgcccctcaaaatccaaaattccattgtttagacccatttttcat 18583318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 28866481 - 28866404
Alignment:
Q  11 tgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||| | ||| |||  |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28866481 tgactcccttagaaggcacttcctacgggactccgcccctcaaaatccaaaatttcatcgtttagacccatttttcat 28866404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 41584524 - 41584442
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||||||||| |||||||  |||||||||||||| |||| |||||||||| ||||||||||||||||    
T  41584524 aaggaccatgactcccatagaagggacttcttacgggactccgcccctcacaatctaaaattccattgtttagacccattttt 41584442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 40650527 - 40650478
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40650527 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 40650478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 49786568 - 49786653
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| |||||| || ||||||  ||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  49786568 aaggaccatgactcccgtagaagagacttcttatgagactccgcccctcaaaatccaaaattccattgttcaaacccatttttcat 49786653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 52744702 - 52744617
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||| | ||||||||| ||||||||||||||| || |||||||| ||||||| ||||||||||||| |||||||||    
T  52744702 aaggaccatgactctcatagaagggacttcttacaagactccacctctcaaaattcaaaatttcatcgtttagacctatttttcat 52744617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 9446038 - 9445967
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||| ||||    
T  9446038 gactcccttagaagggatttcttacgggactccgccc-tcaaaatccaaaatttcatcgtttagacccttttt 9445967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 27795147 - 27795215
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| || |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  27795147 tagaagagacttcttacaggactccgcccctcaaaatccaaaatttcatcgtttagacccgtttttcat 27795215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 6223604 - 6223530
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||| || |||||||  ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  6223604 atgactcccttagaagagacttcttacg-gacaccgcccctcaaaatccaaaattccatcgtttagatccattttt 6223530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 40907786 - 40907711
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| | || |||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  40907786 atgactctcataaaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 40907711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 38885532 - 38885598
Alignment:
Q  22 gaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| ||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38885532 gaagggacttcttatgggactccgcccctcaaaattcaaaattccatcgtttagacccatttttcat 38885598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 44572736 - 44572678
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  44572736 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatgtttgattatatataaga 44572678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 24472678 - 24472605
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| ||||||||| ||||| |  |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24472678 gactcccatagaagggacttcttgcgggactccgcccttcaaaatccaaaatttcatcgtttagacccattttt 24472605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 800742 - 800677
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||||||||||| |||||||  ||||| |||| |||||||||||||||||||||||||||||    
T  800742 gactcccttagaagggacttcttacgggactctgccc-tcaaaatccaaaattccatcgtttagacc 800677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 32817435 - 32817377
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  32817435 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 32817377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 34162590 - 34162532
Alignment:
Q  52 aaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||    
T  34162590 aaaatccaaaattcaatcgtgtagacccatttttcatattcttagaaaaatccaaaaaa 34162532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 34006568 - 34006642
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||| ||||| |||||||| |||||    
T  34006568 atgactcccgtagaagggacttcttacgggactccgtccctcaaaatccaaaatttcatcg-ttagacccgttttt 34006642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 33611249 - 33611187
Alignment:
Q  23 aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||||  |||| || |||||||||||||||||||||| ||||||||||||||||    
T  33611249 aagggacttcttacgggactacgtccctcaaaatccaaaattccattgtttagacccattttt 33611187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 40650333 - 40650275
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||| ||||||||    
T  40650333 aaagcaaaactcaaaattgctgaaatgtgagagagtctgattgctgattaaacataaga 40650275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 45567530 - 45567472
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||| ||||||||    
T  45567530 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattacacataaga 45567472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 49677977 - 49678035
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||| ||||||||||    
T  49677977 aaagcaaaactcaaaattgctgaaatgtgagagagtctgatggctgataatacataaga 49678035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 52744484 - 52744426
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||| ||||||||||   |||||||||||||||    
T  52744484 aaagcaaaactcaaaactgctgaaatgtgaaagagtctgatggctgattatacataaga 52744426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 17000670 - 17000719
Alignment:
Q  53 aaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  17000670 aaatccaaaattcaatcgtctagacccatttttcatattcttagaaaaat 17000719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 23443038 - 23443123
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| || |||||| |||||| || ||||| || ||||| || |||||||||||||||||| || ||||| |||||||||||||    
T  23443038 aaggaccataactcccatagaagagacttcttgcacgactctgctcctcaaaatccaaaattctattgtttaaacccatttttcat 23443123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 34006797 - 34006853
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    |||| ||||||||||| ||||||||||||||||||||||||   |||||||||||||    
T  34006797 aaagtaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataa 34006853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 40907554 - 40907502
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    |||||||||||| ||||||||||||||||||||||||   |||||||||||||    
T  40907554 caaaactcaaaattgctgaaatgtgagagagtctgatgactgattatacataa 40907502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 18583173 - 18583115
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| | ||||||||||||||| ||||||   |||||||||||||||    
T  18583173 aaagcaaaactcaaaactactgaaatgtgagagattctgatggctgattatacataaga 18583115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 32542744 - 32542802
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||| |||||||||||| ||||||   |||||||||||||||    
T  32542744 aaagcaaaactcaaaactgcttaaatgtgagagattctgatggctgattatacataaga 32542802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 41584227 - 41584169
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||    
T  41584227 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatgactgattatacataaga 41584169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 42929208 - 42929266
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||| || ||| ||||||| |||||||||||||||||||  |||||||||    
T  42929208 ttcttacaagacttcgtcccccaaaatcaaaaattccatcgtttagacatatttttcat 42929266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 44572959 - 44572885
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    |||||| ||||||||| |||||| || ||||||   |||||||||| ||||||| |||||||| |||||||||||    
T  44572959 aaggaccatgactcccatagaagagacttcttaggggactccgcccatcaaaattcaaaattctatcgtttagac 44572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 44937918 - 44937860
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||| | ||||||||||||||||| ||||||   |||||||||||||||    
T  44937918 aaagcaaaactcaatactgctgaaatgtgagagattctgatgactgattatacataaga 44937860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 8704360 - 8704295
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| |||||||  |||| | ||||||||||||||||||| |||||||| || ||||||||    
T  8704360 tagaagggacttcttacgggactacacccctcaaaatccaaaatttcatcgttttgatccattttt 8704295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 43319134 - 43319062
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||| ||||||||| || |||||||  |||||||||| |||||||||||||||||||| |||| |||| |||||    
T  43319134 gacttccttagaagagacttcttacgggactccgccc-tcaaaatccaaaattccatcatttacaccctttttt 43319062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 27795346 - 27795382
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgat 265  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27795346 caaaactcaaaactgctgaaatgtgagagagtctgat 27795382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 3561156 - 3561109
Alignment:
Q  41 ctccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||| ||||||| |||| |||||||| |||||||||    
T  3561156 ctccgcccctcaaaattcaaaatttcatcttttagacctatttttcat 3561109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 38131221 - 38131264
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatt 82  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||    
T  38131221 gactctgcccctcaaaatccaaaactccatcgtttagactcatt 38131264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 44037191 - 44037246
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| |||| || |||||||||||| |||||||||||||||||| || |||||    
T  44037191 ttcttacgagacaccacccctcaaaatctaaaattccatcgtttagatcctttttt 44037246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 667190 - 667248
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||| ||||||||||| | ||||||||||||||||||||||   | |||||||||||||    
T  667190 aaagtaaaactcaaaactactgaaatgtgagagagtctgatggctaattatacataaga 667248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 4615413 - 4615471
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || |||||||||||||||||| ||   |||||||||| ||||    
T  4615413 aaagcaaaactcaaaactgttgaaatgtgagagagtctaatggctgattatacacaaga 4615471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6099764 - 6099718
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||||||||||  |||||||||||| ||||||    
T  6099764 gactctgcccctcaaaatccaaaatttaatcgtttagacctattttt 6099718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6099944 - 6099898
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||||||||||  |||||||||||| ||||||    
T  6099944 gactctgcccctcaaaatccaaaatttaatcgtttagacctattttt 6099898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 17000843 - 17000901
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||| ||||||||||| || | |||||||||||||||||||   |||||||||||||||    
T  17000843 aaagaaaaactcaaaactgttaaaatgtgagagagtctgatgactgattatacataaga 17000901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 23443263 - 23443321
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||| ||| ||||||||||||||||| | ||||   |||||||||||||||    
T  23443263 aaagcaaaactcgaaactgctgaaatgtgagagattgtgatggctgattatacataaga 23443321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 27400123 - 27400069
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgttta 74  Q
    ||||||| | |||||||| ||||||||||||||||||| ||||||  ||||||||    
T  27400123 tagaaggaacttcttacaggactccgcccctcaaaatcgaaaattttatcgttta 27400069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 38885603 - 38885633
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  38885603 atttttcatattctcagaaaaatccgaaaaa 38885633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 42546362 - 42546392
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  42546362 atttttcatattctcagaaaaatccgaaaaa 42546392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 45567673 - 45567643
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  45567673 atttttcatattctcagaaaaatccgaaaaa 45567643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Complemental strand, 3561096 - 3561067
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  3561096 tttttcatattctcagaaaaatccgaaaaa 3561067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 24472457 - 24472400
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||| | ||||  |||||||||||||||| |||||| | ||||||||||||||    
T  24472457 aaagcaaaatttaaaacggctgaaatgtgagagattctgatttctgattatacataag 24472400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 42546479 - 42546520
Alignment:
Q  242 tgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||||||||||||||||||   |||||||||||||||    
T  42546479 tgctgaaatgtgagagagtctgatggctgattatacataaga 42546520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 44938114 - 44938073
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||| ||||||| ||| |||||||||||||||||||    
T  44938114 ccctcaaaattcaaaatttcattgtttagacccatttttcat 44938073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Complemental strand, 52744603 - 52744574
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  52744603 tttttcatattctcagaaaaatccgaaaaa 52744574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 11384349 - 11384305
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattt 83  Q
    ||||||||| || |||| ||||||||||||| |||||||||||||    
T  11384349 gactccgccactaaaaaaccaaaattccatcttttagacccattt 11384305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 24472590 - 24472562
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  24472590 atttttcatattctcagaaaaatccgaaa 24472562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 34162417 - 34162361
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    |||||||||||||||| || | |||| ||||||||||||||   |||||||||||||    
T  34162417 aaagcaaaactcaaaactgttaaaatttgagagagtctgatgactgattatacataa 34162361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 40907697 - 40907669
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  40907697 atttttcatattctcagaaaaatccgaaa 40907669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 39525038 - 39525145
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||||||||||||| | |||||    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  39525038 aaggaccatgactcccttagaaggaacttcttgtgggactctgcccctcaaaatccaaaattccatcgtttagaccaatttttcatattctcataaaaat 39525137  T
Q  103 ccgaaaaa 110  Q
    ||||||||    
T  39525138 ccgaaaaa 39525145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 14112127 - 14112211
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| |||| |||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14112127 aaggaccatgaatcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 14112211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 37183640 - 37183528
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-----atttttcatattctcaga 97  Q
    |||||| ||||||||| |||||||||  ||||||  ||||||||||||||||||||||||||||||| |||||||||     ||||||||||||||||||    
T  37183640 aaggaccatgactcccgtagaagggacatcttacgggactccgcccctcaaaatccaaaattccatcatttagacccatttgatttttcatattctcaga 37183541  T
Q  98 aaaatccgaaaaa 110  Q
    ||||| |||||||    
T  37183540 aaaattcgaaaaa 37183528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 6156993 - 6157075
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||| ||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  6156993 aaggaccatgactcccgtagtagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 6157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 26898662 - 26898577
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||  ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  26898662 aaggaccatgactcctgtagaagggacttcttacaggactccgcccctcaaaatccaaaatttcatcgtttagactcatttttcat 26898577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 31928984 - 31928899
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||||| ||||| |  |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  31928984 aaggaccatgactcccttagaagggacttcttgcgggactccgcccttcaaaatccaaaatttcatcgtttagacccatttttcat 31928899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 32841823 - 32841748
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| ||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  32841823 atgactcccctagaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 32841748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 38692642 - 38692557
Alignment:
Q  3 aaggactatgactcccttag-aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| ||||||||||||| |||||| |||||||  ||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  38692642 aaggaccatgactcccttaggaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagacacatttttca 38692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 26190174 - 26190096
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| ||||||| | ||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26190174 atgactcccctagaaggaacttcttaagggactccgcccctcaaaatccaaaattccattgtttagacccatttttcat 26190096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 31221190 - 31221114
Alignment:
Q  11 tgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| || ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  31221190 tgacttccatagaagggacttcttacgagactccgcccctcaaaatccaaaatttcatcgtttaga-ccatttttcat 31221114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 41253577 - 41253666
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaa 101  Q
    |||||||||||||| || |||||   |||||||| || |||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  41253577 gactcccttagaagagacttctttagagactccgaccttcaaaatctaaaatttcatcgtttagacccatttttcatatactcagaaaaa 41253666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 11186037 - 11185961
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| | ||||||| ||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  11186037 gactcccgttgaagggacttcttacgatactccgcccctcaaaattcaaaattcaatcgtttagacccatttttcat 11185961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 33487880 - 33487955
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||| |||||    ||| |||||||| ||||||||||||||||||||||||||||||||||    
T  33487880 atgactcccttagaagggacttcttttgggaccccgcccctaaaaatccaaaattccatcgtttagacccattttt 33487955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 27158385 - 27158431
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27158385 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 27158431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 27212972 - 27213046
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||| ||||||||| |||||||  ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  27212972 atgactcccctagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagacccttttt 27213046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 5456327 - 5456400
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| |||||||||||||||||||  ||||||||| |||||||||||||||| ||||||||| | ||||||||    
T  5456327 gactcacttagaagggatttcttacgggactccgcctctcaaaatccaaaatttcatcgtttaaatccattttt 5456400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 7884456 - 7884541
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| |||||| || |||||||   |||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  7884456 aaggaccatgactcccgtagaagagacttcttacggaactccgcccctcaaaatctaaaatttcattgtttagacccatttttcat 7884541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 40619826 - 40619762
Alignment:
Q  21 agaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| | |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  40619826 agaaggaacttcttacgggactccgcccctcaaaatccaaaattccatcatttagacccattttt 40619762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 26093731 - 26093802
Alignment:
Q  13 actcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||| |||| |||| |||||||  |||||| |||||||||||||||||||||||| ||||||||||||||    
T  26093731 actcccgtagaggggacttcttacgggactcctcccctcaaaatccaaaattccatcatttagacccatttt 26093802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 7884694 - 7884752
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  7884694 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 7884752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 20891881 - 20891959
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| || |||||| |||||||  || |||| || |||||||||||||||||||||||||||| ||||||||||    
T  20891881 atgactcccctacaagggacttcttacgggattccgtccttcaaaatccaaaattccatcgtttagacacatttttcat 20891959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 38372563 - 38372645
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||| ||||||||| || |||||||  |||||| |||||||||||||||||||||||||  ||||||| |||||    
T  38372563 aaggaccatgacttccttagaagagacttcttacgggactccacccctcaaaatccaaaattccatcgcctagaccctttttt 38372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 38692421 - 38692363
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  38692421 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 38692363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 4064587 - 4064530
Alignment:
Q  53 aaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||    
T  4064587 aaatccaaaattcaatcgtctagacccatttttcatattcttagaaaaatccaaaaaa 4064530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 12464977 - 12464892
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||  ||||||| | |||||||  ||||| ||||||||||||||||||||||||  |||||||| |||||||||    
T  12464977 aaggaccatgactcctatagaaggaacttcttacgggactctgcccctcaaaatccaaaattccattatttagacctatttttcat 12464892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 16429250 - 16429323
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||| |||||||||||| |||||||  |||||||||||||||||| |||||||  ||||||||||||| |||||    
T  16429250 gactaccttagaagggacttcttacgggactccgcccctcaaaattcaaaattttatcgtttagaccctttttt 16429323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 21070636 - 21070709
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| ||||||||| ||||||   ||| | |||||||||||||||||||||||| ||||||||||||||||    
T  21070636 gactcccctagaagggacttcttattggacactgcccctcaaaatccaaaattccattgtttagacccattttt 21070709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 28445348 - 28445284
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    ||||||||||||||||| ||||||  | ||||||||| ||||||||||||||||||||||||||||    
T  28445348 gactcccttagaagggacttcttatgatactccgccc-tcaaaatccaaaattccatcgtttagac 28445284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 15799523 - 15799569
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15799523 gactccacccctcaaaatccaaaattccatcgtttagaccaattttt 15799569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 15799726 - 15799784
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | ||||||||||||||||||| | |||||||||||||||    
T  15799726 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatgtctgattatacataaga 15799784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 15958011 - 15958093
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| || ||||||||||||| || ||||||   |||| |||| |||||||||||||||| ||||||||||||| ||||||    
T  15958011 aaggaccataactcccttagaagcgacttcttatgggacttcgcctctcaaaatccaaaatttcatcgtttagaccaattttt 15958093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 18515104 - 18515150
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  18515104 gactccgcccctcaaaatctaaaattccatcatttagacccattttt 18515150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 31220966 - 31220908
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||| ||||   |||||||||||||||    
T  31220966 aaagcaaaactcaaaactgctgaaatgtgagagagtttgattgctgattatacataaga 31220908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 33331420 - 33331478
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||| ||||||| ||||| || |||||||||||||||||| |||||||||||||    
T  33331420 tagaagggacttcttaccagacttcgtccctcaaaatccaaaatttcatcgtttagacc 33331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 38872151 - 38872209
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   | |||||||||||||    
T  38872151 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctaattatacataaga 38872209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 26622394 - 26622461
Alignment:
Q  17 ccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| | || ||||||  ||||||||||||||||||| |||||||  ||||||||||||||||||    
T  26622394 ccttagatgagacttcttatgagactccgcccctcaaaattcaaaattttatcgtttagacccatttt 26622461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 4064423 - 4064365
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||    
T  4064423 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatgactgattatacataaga 4064365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 6800763 - 6800725
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  6800763 gactccgcccctcaaaatccaaaatttcatcgtttagac 6800725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 12464733 - 12464675
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||| ||||||||||| ||||||||||||||||| ||||||   |||||||||||||||    
T  12464733 aaaggaaaactcaaaactgctgaaatgtgagagattctgatgactgattatacataaga 12464675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 26189944 - 26189886
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||| ||||||   |||||| ||||||||    
T  26189944 aaagcaaaactcaaaactgctgaaatgtgagagattctgatggctgattaaacataaga 26189886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 26898424 - 26898366
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||    
T  26898424 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatggctgattatacataaga 26898366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 31928753 - 31928695
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||| |||||| ||||||||||||||||| ||||||   |||||||||||||||    
T  31928753 aaagcaaaattcaaaactgctgaaatgtgagagattctgatggctgattatacataaga 31928695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 32841598 - 32841544
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||| || ||||||||||||||||||||||  |||||||| ||||||    
T  32841598 caaaactcaaaattgttgaaatgtgagagagtctgatagctgattatatataaga 32841544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 33488104 - 33488162
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||    
T  33488104 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatggctgattatacataaga 33488162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 37183415 - 37183357
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| | ||||||||||||||||| ||||   |||||||||||||||    
T  37183415 aaagcaaaactcaaaactactgaaatgtgagagagtttgatggctgattatacataaga 37183357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 43388009 - 43387944
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||||||| ||| |||||||  ||||||| || |||||||||||||||||||| ||||||||    
T  43388009 gactcccttagaaaggacttcttacgggactccgtcc-tcaaaatccaaaattccatcatttagacc 43387944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 8739132 - 8739079
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattc 65  Q
    ||||||||||||||| | || ||||  |||||||||||||||||||||||||||    
T  8739132 gactcccttagaaggaacttattacgggactccgcccctcaaaatccaaaattc 8739079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 38640938 - 38640979
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  38640938 ccctcaaaatccaaaattccatcatttagacccttttttcat 38640979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 5247316 - 5247276
Alignment:
Q  44 cgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  5247316 cgcccctcaaaatccaaaatttcatcgtttagactcatttt 5247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 6800575 - 6800519
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    ||||||||| |||||| ||||||||||||||||| ||||||   |||||||||||||    
T  6800575 aaagcaaaattcaaaactgctgaaatgtgagagattctgattactgattatacataa 6800519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 28083193 - 28083157
Alignment:
Q  45 gcccctcaaaatccaaaattccatcgtttagacccat 81  Q
    |||||||||||||||||||||||||||| ||||||||    
T  28083193 gcccctcaaaatccaaaattccatcgttcagacccat 28083157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 40619612 - 40619572
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgat 265  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  40619612 aaagcaaaactcaaaactactgaaatgtgagagagtctgat 40619572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 19027338 - 19027393
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| ||||| | |||||||||||||||||||  |||||||||||| ||||||    
T  19027338 ttcttacgagacttcacccctcaaaatccaaaattatatcgtttagacctattttt 19027393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 5535250 - 5535204
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||||||    
T  5535250 tccgcccatcaaaatcataaattccatcgtttagaccaatttttcat 5535204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 20891970 - 20892000
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  20891970 atttttcatattctcagaaaaatccgaaaaa 20892000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 20892106 - 20892164
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||  ||||||||||||||||||| ||||   ||||||||| |||||    
T  20892106 aaagcaaaactcaaagctgctgaaatgtgagagagtttgatggctgattatacctaaga 20892164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 26095367 - 26095417
Alignment:
Q  38 agactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| ||||||||||||| |||| ||  ||||||||||||||||||||||    
T  26095367 agacttcgcccctcaaaattcaaagttatatcgtttagacccatttttcat 26095417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 28624403 - 28624357
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||||||    
T  28624403 gactctgccactcaaaatctaaaattctatcgtttagacccattttt 28624357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 29863053 - 29863111
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||| ||||||||||||||   |||||||||||||||    
T  29863053 aaagcaaaactcaaaactgttaaaatatgagagagtctgatggctgattatacataaga 29863111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 33487968 - 33487998
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  33487968 atttttcatattctcagaaaaatccgaaaaa 33487998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 34530208 - 34530249
Alignment:
Q  36 caagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||||||| ||||||| |||||||||||||||||||||    
T  34530208 caagactccgccc-tcaaaattcaaaattccatcgtttagacc 34530249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 38372800 - 38372858
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||| |||||| || |||||||||||||||||||||   ||||||||| |||||    
T  38372800 aaagcaaaattcaaaactgttgaaatgtgagagagtctgatggctgattatacgtaaga 38372858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 42289754 - 42289792
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  42289754 gactctgcccctcaaaatccaaaattctatcgtttagac 42289792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 12847717 - 12847749
Alignment:
Q  55 atccaaaattccatcgtttagacccatttttca 87  Q
    |||||||||| ||||||||||||||||||||||    
T  12847717 atccaaaatttcatcgtttagacccatttttca 12847749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 8885311 - 8885226
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8885311 aaggaccatgactcccgtagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcatttagacccatttttcat 8885226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 42280750 - 42280668
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| || |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42280750 aaggaccataactcccctagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 42280668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 11698175 - 11698093
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| |||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  11698175 aaggaccatgactcccatagaagggacgtcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 11698093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 7981825 - 7981897
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||||| ||||||    
T  7981825 gactcccttagaagggatttgttataggacttcgcccctcaaaatccaaaattccatcgtttagactcatttt 7981897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 28917075 - 28917158
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    |||||| ||||||||||||||||| | ||||||   |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  28917075 aaggaccatgactcccttagaaggaacttcttatgggactccgcccctcaaaatccaaaattccattgtttagactcatttttc 28917158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 40994980 - 40995054
Alignment:
Q  13 actcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| |||||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  40994980 actcccgtagaagggatttattacgggactccgcctctcaaaatccaaaattccatcgtttagacacatttttca 40995054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 3094985 - 3095069
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| ||||||||| ||| ||||| | |||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  3094985 aaggaccatgactcccataggagggactacttacgcgactccacccctcaaaatccaaaatttcatcgtttagacccatttttca 3095069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 34853628 - 34853742
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctca 95  Q
    |||||| ||||||||||||||| ||| |||||    ||||||||||||||||||  |||||||||||||||||||||       ||||||||||||||||    
T  34853628 aaggaccatgactcccttagaaaggacttcttctgggactccgcccctcaaaataaaaaattccatcgtttagacccatttttaatttttcatattctca 34853727  T
Q  96 gaaaaatccgaaaaa 110  Q
    |||||||| ||||||    
T  34853728 gaaaaatctgaaaaa 34853742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 36980878 - 36980950
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| ||||||||| |||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||    
T  36980878 gactcccctagaagggacttcttacaggactccgctcctcaaaattcaaaatcccatcgtttagacccatttt 36980950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 31519751 - 31519668
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||| |||||||||||||  ||||||  ||||||  |||||||||||||||||||||| |||||||||||||||||||    
T  31519751 aaggaccatgacacccttagaagggacgtcttacgggactcc--ccctcaaaatccaaaattccattgtttagacccatttttcat 31519668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 32504159 - 32504095
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatc 103  Q
    |||||| ||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||||    
T  32504159 gactccacccctcaaaatccaaaatttcattgttgaaacccatttttcatattctcagaaaaatc 32504095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 8885079 - 8885021
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  8885079 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 8885021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 11697946 - 11697888
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  11697946 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 11697888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 42280528 - 42280470
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  42280528 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 42280470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 31234672 - 31234598
Alignment:
Q  12 gactcccttagaagggatttcttacaag--actccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||| |||||||  |  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  31234672 gactcccttagaagggacttcttacgcgggactccgccc-tcaaaatccaaaattccatcgtttagaccccttttt 31234598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 33472286 - 33472358
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||||||||||| || |||||||  |||| ||||||||||||| ||||||| |||||||||||||| ||||    
T  33472286 gactcccttagaagagacttcttacgggactacgcccctcaaaattcaaaatttcatcgtttagacccttttt 33472358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 4259514 - 4259459
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  4259514 ttcttacgggactccgcccctcaaaatccaaaattctatcctttagacccattttt 4259459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 9074061 - 9074119
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||    
T  9074061 aaagcaaaattcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 9074119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 10840605 - 10840527
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||||   |||||||  |||||| ||||||||||| |||||| ||||| ||||||||||||||||||    
T  10840605 atgactcccgtagaaggatattcttacgggactccacccctcaaaattcaaaatcccatcttttagacccatttttcat 10840527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 21004849 - 21004907
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||| ||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||    
T  21004849 aaagtaaaactcaaaactgctgaaatgtgagagattctgatggttgattatacataaga 21004907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 27927579 - 27927521
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| | ||||||||||||||||||||||   |||||||||||||||    
T  27927579 aaagcaaaactcaaaacttctgaaatgtgagagagtctgattgctgattatacataaga 27927521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 28917311 - 28917369
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||| ||||||||||||||   |||||||||||||||    
T  28917311 aaagcaaaactcaaaactgctgaaatttgagagagtctgatgactgattatacataaga 28917369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 40995190 - 40995248
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||| ||||||||    
T  40995190 aaagcaaaactcaaaattgctgaaatgtgagagagtctgatggctgattacacataaga 40995248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 10833458 - 10833386
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||| || ||||| |||||||||  ||||||||||||||| ||||||||| |||| |||||    
T  10833458 gactcccttagaagggactttttacaggactccgcca-tcaaaatccaaaatttcatcgtttacaccctttttt 10833386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 24627789 - 24627861
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||| || ||||||||  ||||||||| |||||||||||||||| ||| ||||||||| |||||    
T  24627789 gactcccttagaagagacttcttacagaactccgccc-tcaaaatccaaaattctatcatttagaccctttttt 24627861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 24627998 - 24628070
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||| || ||||||| |||||||| ||||||||||||||||||| ||| ||||| ||| |||||    
T  24627998 gactcccttagaagagacttcttacgagactccg-ccctcaaaatccaaaattctatcatttaggccctttttt 24628070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 36318105 - 36318181
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| ||||||||  || ||||||  ||||||| |||||||||||  ||||||||||||||||||| ||||||||||    
T  36318105 gactaccttagaaatgacttcttatgagactccacccctcaaaatttaaaattccatcgtttagactcatttttcat 36318181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 27927782 - 27927727
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||  |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  27927782 ttcttacgggactccacccctccaaatccaaaatttcatcgtttagacccattttt 27927727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 3095221 - 3095279
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||    
T  3095221 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatggctgattatacataaga 3095279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 9073855 - 9073901
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  9073855 gactcagcccctcaaaatccaaaattctatcgtttagaaccattttt 9073901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 11698602 - 11698660
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||||||||| |||| ||||||||   |||||||||||||||    
T  11698602 aaagcaaaactcaaaattgctgaaatgcgagatagtctgatggctgattatacataaga 11698660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 14163677 - 14163619
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||| |||||| ||||||||||||||||||||||||   | |||||||||||||    
T  14163677 aaagcaaaattcaaaactgctgaaatgtgagagagtctgatggctaattatacataaga 14163619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 14163889 - 14163831
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  ||||||||||||||||||  ||||||||||| |||||||| |||||||||    
T  14163889 ttcttacgggactccgcccctcaaaataaaaaattccatcatttagacctatttttcat 14163831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 21594312 - 21594370
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||| ||||   ||||||||| |||||    
T  21594312 aaagcaaaactcaaaactgctgaaatgtgagagagtttgattgctgattatacgtaaga 21594370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 44106747 - 44106805
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||| ||||||||||| |||||||   |||||||||||||||    
T  44106747 aaagcaaaactcaaaactgctaaaatgtgagagtgtctgatgactgattatacataaga 44106805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 6395401 - 6395466
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||  ||| | ||||||||||||||||||||| ||| |||||||| ||||||    
T  6395401 tagaagagatttcttacgtgacgctgcccctcaaaatccaaaattcaatcatttagacctattttt 6395466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 10840371 - 10840314
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    |||| |||| |||||| ||||||||||||||||| ||||||  |||||||||||||||    
T  10840371 aaaggaaaattcaaaactgctgaaatgtgagagactctgattgttgattatacataag 10840314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 11698445 - 11698482
Alignment:
Q  51 caaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  11698445 caaaatcaaaaattccatcgtttagacccatttttcat 11698482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 17119696 - 17119655
Alignment:
Q  46 cccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  17119696 cccctcaaaatccaaaatttcatcgtttagacccatctttca 17119655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 36407331 - 36407274
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||| ||||||||||||||||| |||||| ||||||   ||||||||||||||    
T  36407331 aaagcaaaattcaaaaatgctgaaatgggagagattctgattgctgattatacataag 36407274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 40328225 - 40328281
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||||  |||||||||||||||||||| ||||||||||||| || |||||||||||    
T  40328225 ttcttacgggactccgcccctcaaaatcc-aaattccatcgttaagtcccatttttca 40328281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 17119496 - 17119444
Alignment:
Q  228 gcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacata 280  Q
    ||||||||||||| ||| ||||||||||||||||||||   ||||||||||||    
T  17119496 gcaaaactcaaaattgcagaaatgtgagagagtctgatggctgattatacata 17119444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 27234661 - 27234597
Alignment:
Q  24 agggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| ||| |||||||||  ||| |||||||| ||||||| |||| ||||||||||||||||||    
T  27234661 agggacttcctacaagactttgccactcaaaattcaaaatttcatcatttagacccatttttcat 27234597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 28219047 - 28219004
Alignment:
Q  45 gcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  28219047 gcccctcaaaatccaaaattttatcgtttagacctatttttcat 28219004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 110
Target Start/End: Original strand, 44106611 - 44106642
Alignment:
Q  79 catttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||||    
T  44106611 catttttcatattctcagaaaaatccgaaaaa 44106642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 40328437 - 40328475
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctg 263  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  40328437 aaagcaaaacttaaaactgctgaaatgtgagagagtctg 40328475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 31519515 - 31519482
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagaga 258  Q
    |||||||||||||||| |||||||||||||||||    
T  31519515 aaagcaaaactcaaaactgctgaaatgtgagaga 31519482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 41530891 - 41530963
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||| || |||||||  ||||||| |||||||||||||||||| |||  |||||| || |||||    
T  41530891 gactcccttagaagagacttcttacgggactccg-ccctcaaaatccaaaattgcattatttagatcctttttt 41530963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 109
Target Start/End: Original strand, 3095085 - 3095113
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaa 109  Q
    |||||||||||||||||||||||||||||    
T  3095085 tttttcatattctcagaaaaatccgaaaa 3095113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 36980963 - 36980991
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  36980963 atttttcatattctcagaaaaatccgaaa 36980991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 42925499 - 42925414
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42925499 aaggaccatgactcccttagaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 42925414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 9152091 - 9152173
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  9152091 aaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 9152173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 37518122 - 37518040
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37518122 aaggaccatgactcccatagaagagacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 37518040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 19225450 - 19225372
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19225450 atgactcccatagaaggaacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagatccatttttcat 19225372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 36468389 - 36468291
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||  |||||| |||||||  ||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  36468389 gactccctttaaagggacttcttacgggactccgcccctcaagattcaaaatttcatcgtttagacccatttttcatattctcataaaaatacgaaaaa 36468291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 47202787 - 47202872
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| ||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47202787 aaggaccatgactcccatagaagggacttcttaagggactccgcccctcaaaatccaaaattccattgtttagacccatttttcat 47202872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 31985369 - 31985291
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| | |||||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  31985369 atgactctcatagaagggatttcttacaggactctgcccctcaaactccaaaattcaatcgtttagacccatttttcat 31985291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 43737382 - 43737467
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||| | |||||    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43737382 aaggaccatgactcccttagaaggaacttcttgtgggactccgcccctcaaaatctaaaattccatcgtttagacccatttttcat 43737467  T

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Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 7115119 - 7115046
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||| |||||||  ||||||  |||||||||||||||||||||| ||||||||||||||||    
T  7115119 gactcccttagaagggacttcttacgggactccttccctcaaaatccaaaattccattgtttagacccattttt 7115046  T

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Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 19818680 - 19818764
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  |||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  19818680 aaggaccatgactcccgtagaagggacttcttacgggactccacccctcaaa-tccaaaattccatcgtttagacctatttttcat 19818764  T

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Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 31643340 - 31643425
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||| | ||||||   |||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  31643340 aaggaccatgactcccttagaaggaacttcttatgggactccacccctcaaaatccaaaattccattatttagacccatttttcat 31643425  T

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Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 24042034 - 24041971
Alignment:
Q  25 gggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24042034 gggacttcttacgggactccgcccctcaaaatccaaaactccatcgtttagacccatttttcat 24041971  T

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Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 33573889 - 33573822
Alignment:
Q  21 agaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||| |||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  33573889 agaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagacccatttttcat 33573822  T

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Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 42864961 - 42864878
Alignment:
Q  3 aaggactatgactcccttagaagg-gatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||| | || ||||||   ||||||||||||||||||||||||||| |||||||||||||||||||    
T  42864961 aaggaccatgactcccttagaaagagacttcttatgggactccgcccctcaaaatccaaaattcaatcgtttagacccattttt 42864878  T

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Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 43186094 - 43186157
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttag 75  Q
    ||||||||||||||||| |||||||  |||||||||||| ||||||||||||||||||||||||    
T  43186094 gactcccttagaagggacttcttacgggactccgcccctaaaaatccaaaattccatcgtttag 43186157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 48705846 - 48705775
Alignment:
Q  15 tcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    |||| ||||||||| |||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  48705846 tcccgtagaagggacttcttataggactccgcccctcaaattccaaaatttcatcgtttagacccatttttc 48705775  T

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Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 3304610 - 3304528
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||  ||||||||| |||||||  |||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  3304610 aaggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagacctattttt 3304528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 8155206 - 8155280
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||| || |||| | |||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  8155206 atgactcccgtacaaggaacttcttacgggactccgcccctcaaaatccaaaattccattgtttagacccatttt 8155280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 36468177 - 36468119
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  36468177 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttgattatacataaga 36468119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 36629503 - 36629585
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||||||||| |||||||  ||||||  || |||||||||||||||||||||||||||| |||||||    
T  36629503 aaggaccatgactcccgtagaagggacttcttacgggactccatccttcaaaatccaaaattccatcgtttagactcattttt 36629585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 8214442 - 8214377
Alignment:
Q  14 ctcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc 79  Q
    ||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||| |||||||||    
T  8214442 ctcccttagaagggacttcttacgagacttcgcccctcacaatccaaaattccatcttttagaccc 8214377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 16278322 - 16278395
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||| |||||||  |||||||| | ||||||||||||||| |||||||||||||| |||||    
T  16278322 gactcccttagaagggacttcttacgggactccgcacatcaaaatccaaaatttcatcgtttagaccctttttt 16278395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 26554986 - 26554937
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26554986 gactctgcccctcaaaatccaaaattccatcgtttagacccatttttcat 26554937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 5731128 - 5731063
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||| ||||||||    
T  5731128 gactcccttagaagggacttcttacgagactccaccc-tcaaaatccaaaattccatcatttagacc 5731063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 37517891 - 37517833
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  37517891 aaagcaaaactcaaaactgctgaaatgtgagagagtctgattgctgattatacataaga 37517833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 26554791 - 26554734
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||    
T  26554791 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttggttatacataag 26554734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 28230315 - 28230266
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  28230315 gactccacccctcaaaatctaaaattccatcgtttagacccatttttcat 28230266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6466960 - 6466914
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  6466960 gactccgcccctcaaaatctaaaatttcatcgtttagacccattttt 6466914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 31643577 - 31643635
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||| ||||||| ||||||  ||||||||||||||||    
T  31643577 aaagcaaaactcaaaactgctgaaatatgagagattctgatggttgattatacataaga 31643635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 36408886 - 36408944
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| | ||||||||||| |||||||||||  |||||||||||||||    
T  36408886 aaagcaaaactcaaaactactgaaatgtgaaagagtctgataactgattatacataaga 36408944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 36629736 - 36629794
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||| ||||||||   |||||||||||||||    
T  36629736 aaagcaaaactcaaaactgctgaaatgtgagaaagtctgatgactgattatacataaga 36629794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 47203017 - 47203075
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||    
T  47203017 aaagcaaaactcaaaactgctgaaatgtgagagattctgatggctgattatacataaga 47203075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 8155428 - 8155485
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    |||||||||||||||| ||||||||||||||||| ||||||   ||||||||||||||    
T  8155428 aaagcaaaactcaaaactgctgaaatgtgagagattctgatggctgattatacataag 8155485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 30861399 - 30861464
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||||||| |||||||| || ||| |||||| |||| ||||||| |||||||||||||||||||    
T  30861399 ttagaagggacttcttacaggattcctcccctcgaaattcaaaatttcatcgtttagacccatttt 30861464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 32701110 - 32701034
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||| |||||||  | |||  |||||||||||  || |||||||| ||||||||||||||||||    
T  32701110 gactcccttagaagggacttcttacggggctcttcccctcaaaatttaacattccatcttttagacccatttttcat 32701034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 1519050 - 1519096
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  1519050 gactccgctcctcaaaatctaaaattccatcgtttagatccattttt 1519096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 19225226 - 19225168
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||| |||||| |||||||||||| |||||||||||   |||||||||||||||    
T  19225226 aaagcaaaattcaaaactgctgaaatgtgggagagtctgatggctgattatacataaga 19225168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 24041818 - 24041760
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||    
T  24041818 aaagcaaaactcaaaactgataaaatgtgagagagtctgatggctgattatacataaga 24041760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 42925266 - 42925208
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||    
T  42925266 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatggctgattatacataaga 42925208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 43737621 - 43737679
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || |||||||||||||||||| ||   |||||||||||||||    
T  43737621 aaagcaaaactcaaaactgttgaaatgtgagagagtctaatggctgattatacataaga 43737679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 30861603 - 30861660
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||| |||||| | ||||||||||||||| ||||||  |||||||||||||||    
T  30861603 aaagcaaaattcaaaactcctgaaatgtgagagattctgattgttgattatacataag 30861660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 36408702 - 36408776
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||| ||||| ||       |||||||||||||||| ||||||||||||||    
T  36408702 tccgcccctcaaaatccaaaattccatcg-ttagatccattttaaatttttcatattctcaaaaaaatccgaaaaa 36408776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 47239561 - 47239492
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||| |||||||  |||| |||| |||||||||||||||| |||||||||| ||  ||||||||    
T  47239561 ttagaagggacttcttacgggacttcgcctctcaaaatccaaaatttcatcgtttagtcctgtttttcat 47239492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 6467921 - 6467873
Alignment:
Q  235 tcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||| ||||||||||||||||||||||||   |||||||||||||||    
T  6467921 tcaaaactgctgaaatgtgagagagtctgatgactgattatacataaga 6467873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 85
Target Start/End: Complemental strand, 37217540 - 37217509
Alignment:
Q  54 aatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||||||||||||    
T  37217540 aatccaaaattccatcgtttagacccattttt 37217509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 1519109 - 1519139
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  1519109 atttttcatattctcagaaaaatccgaaaaa 1519139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 3304374 - 3304316
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||| ||||| ||||||| ||||||   |||||||||||||||    
T  3304374 aaagcaaaactcaaaactgccgaaatatgagagattctgatggctgattatacataaga 3304316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 28230115 - 28230057
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||| ||||||||||| |||| |||||||||| ||||||||   |||||||||||||||    
T  28230115 aaagtaaaactcaaaactgctaaaatgtgagaaagtctgatgcatgattatacataaga 28230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 36629600 - 36629630
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  36629600 atttttcatattctcagaaaaatccgaaaaa 36629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 43737476 - 43737506
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  43737476 atttttcatattctcagaaaaatccgaaaaa 43737506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 19818774 - 19818803
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  19818774 tttttcatattctcagaaaaatccgaaaaa 19818803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 31985170 - 31985113
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||| |||||| ||||||||||| ||||| ||||||   ||||||||||||||    
T  31985170 aaagcaaaattcaaaactgctgaaatgtaagagattctgattgctgattatacataag 31985113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 33151502 - 33151555
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaat 56  Q
    |||||| ||||||||||||||||||| |||||||  |||||| ||| |||||||    
T  33151502 aaggaccatgactcccttagaagggacttcttacgggactccacccttcaaaat 33151555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 24690174 - 24690122
Alignment:
Q  24 agggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttaga 76  Q
    ||||| |||||||| ||||   |||||||||||||||||||| ||||||||||    
T  24690174 agggacttcttacaggactttacccctcaaaatccaaaattcaatcgtttaga 24690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 42864863 - 42864835
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  42864863 atttttcatattctcagaaaaatccgaaa 42864835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 39150146 - 39150209
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39150146 ccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 39150209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 46622654 - 46622547
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| || |||||| |||||   |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46622654 aaggaccatcactcccatagaatcaatttcttacgggactccgcccctcagaatccaaaattccatcgtttagacccatttttcatattcttagaaaaat 46622555  T
Q  103 ccgaaaaa 110  Q
    | ||||||    
T  46622554 ctgaaaaa 46622547  T

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Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 3902665 - 3902551
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctca 95  Q
    |||||| ||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||| ||       ||||||||||||||||    
T  3902665 aaggaccatgacacccttagaaggaatttcttacgggactccgcccctcaaaatccaaaattcaatcgtttagatccatttttaatttttcatattctca 3902566  T
Q  96 gaaaaatccgaaaaa 110  Q
    |||||||||||||||    
T  3902565 gaaaaatccgaaaaa 3902551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 34821202 - 34821117
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||| | ||||||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  34821202 aaggaccatgactctcatagaagggacttcttacgggagtccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 34821117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 35142373 - 35142458
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  | |||||||||| |||||||||||||||||||||||||||||||||||||    
T  35142373 aaggaccatgactcccgtagaagggacttcttacggggctccgcccctaaaaatccaaaattccatcgtttagacccatttttcat 35142458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 28873313 - 28873391
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||| || |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28873313 atgactcccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagatccatttttcat 28873391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 47302326 - 47302404
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| ||||||||| |||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  47302326 atgactcccatagaagggacttcttacgggactctgcccctcaaaatccaaaattccattgtttagacccatttttcat 47302404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 51258711 - 51258785
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||| ||||||||| |||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  51258711 atgactcccgtagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagacccatttt 51258785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 2358481 - 2358396
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  |||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  2358481 aaggaccatgactcccctagaagggacttcttacgggactacgcccctcaaaatctaaaattccattgtttagacccatttttcat 2358396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 3938482 - 3938565
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    |||||| |||||||||||| |||| | ||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||    
T  3938482 aaggaccatgactcccttataaggaacttcttacaagactccgcccctcaaaatcttaaatttcattgtttagacccatttttc 3938565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 4394279 - 4394364
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||| | || ||||  || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  4394279 aaggaccatgactcccgtagaaggaactttttacgggattccgcccctcaaaatccaaaattccatcgtttagacccttttttcat 4394364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 29048639 - 29048711
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| ||||| ||| || ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29048639 gactcccgtagaaaggacttattacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttt 29048711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 501034 - 500963
Alignment:
Q  14 ctcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  501034 ctcccatagaagggacttcttacggcactccgcccctcaaaatccaaaattccatcgtttagaccaattttt 500963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 51540486 - 51540404
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||||||| |||| |   || || |||||||||||||||||| ||||||||||||||||||||||    
T  51540486 aaggaccatgactcccttagaagggacttctcatgggattctgcccctcaaaatccaaaactccatcgtttagacccattttt 51540404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 51816531 - 51816621
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||| ||| |||||||  ||||| |||||||||||| |||| || ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  51816531 tagaatggacttcttacgggactctgcccctcaaaattcaaattttcatcgtttagatccatttttcatgttctaagaaaaatccgaaaaa 51816621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 45244606 - 45244678
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  45244606 gactcccttagaaaggacttcttacgagactccgccc-tcaaaatccaaaattccatcatttagaccctttttt 45244678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 50716553 - 50716638
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||  |||||| || |||||||  || |||||||||||||||||||||||||||| |||||||| |||||||||    
T  50716553 aaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattccatcctttagacctatttttcat 50716638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 50796294 - 50796209
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||  |||||| || |||||||  || |||||||||||||||||||||||||||| |||||||| |||||||||    
T  50796294 aaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattccatcctttagacctatttttcat 50796209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 14828758 - 14828690
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| || |||||||| |||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  14828758 tagaagagacttcttacaggactccgcctttcaaaatccaaaattccatcgtttagacctatttttcat 14828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 35345751 - 35345683
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||| ||  ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  35345751 tagaagggacttctaacgggactccgcccctcaaaatccaaaattccaccgtttaaacccatttttcat 35345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 3351923 - 3351852
Alignment:
Q  5 ggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttaga 76  Q
    |||| ||||||||| ||||||||| ||||||   ||||||||||||||||||| ||||||||||||||||||    
T  3351923 ggacaatgactcccgtagaagggacttcttatgggactccgcccctcaaaatctaaaattccatcgtttaga 3351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 33439494 - 33439569
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| || |||||| || ||||   |||||||||| |||||||||||||||||||||||||||||||||||    
T  33439494 atgactcccataaaagggacttgttacggaactccgccccacaaaatccaaaattccatcgtttagacccattttt 33439569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 21481395 - 21481453
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccg 105  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  21481395 cccttaaaatccaaaattccattgtttagaccaatttttcatattctctgaaaaatccg 21481453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 43471524 - 43471466
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  43471524 tagaaggaacttcttacaagactccacccctcaaaatccaaaatttcatcgtttagacc 43471466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 47739565 - 47739507
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  47739565 aaagcaaaactcaaaactgctgaaatgtgagagagtctgattgctgattatacataaga 47739507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 43472827 - 43472762
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccat 68  Q
    |||||| ||||||||  ||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  43472827 aaggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaattccat 43472762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 30721655 - 30721611
Alignment:
Q  41 ctccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  30721655 ctccgcccctcaaaatccaaaatttcatcgtttagacccattttt 30721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 34009936 - 34009868
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||||  ||||||||||| ||||||||||||||||||| |||| || ||||||||||    
T  34009936 tagaagggacttcttacgtgactccgccccccaaaatccaaaattccatcatttatactcatttttcat 34009868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 51540256 - 51540200
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||    
T  51540256 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataa 51540200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 33439706 - 33439757
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattata 276  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  33439706 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttgattata 33439757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 2358242 - 2358184
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||    
T  2358242 aaagcaaaactcaaaactgctgaaatgtgagagattctgatggctgattatacataaga 2358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 38977599 - 38977521
Alignment:
Q  11 tgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcg-tttagacccatttttcat 88  Q
    |||||||| ||||||||| |||||    |||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  38977599 tgactcccgtagaagggacttcttgtgggactccgcccctcaaaatccaaaatttcatcgttttaaacccatttttcat 38977521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 41300937 - 41300995
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  |||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  41300937 ttcttacgggactccgcccatcaaaatcaaaaattccatcgtttagacctatttttcat 41300995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 49095838 - 49095780
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||| |||||||||||||||||||   |||||||||||||||    
T  49095838 aaagcaaaactcaaaactgcttaaatgtgagagagtctgatgactgattatacataaga 49095780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 49096040 - 49095995
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  49096040 gactccgtccctcaaaatccaaaattccatcgttaagacccatttt 49095995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 47739756 - 47739679
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt-------catattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||       |||||||||||||||||||||||||    
T  47739756 gactccgcccctcaaaattcaaaattccgt-gtttagacccatttttaatttttcatattctcagaaaaatccgaaaaa 47739679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 29036140 - 29036186
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  29036140 gactctgcccctcaaaatctaaaatttcatcgtttagacccattttt 29036186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 39150312 - 39150370
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||||||||||||  |||||||||   |||||||||||||||    
T  39150312 aaagcaaaactcaaaactgctgaaatgtgaaggagtctgatggatgattatacataaga 39150370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 41301434 - 41301492
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || |||| ||||||||||||||||   |||||||||||||||    
T  41301434 aaagcaaaactcaaaactgttgaattgtgagagagtctgatggatgattatacataaga 41301492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 50716781 - 50716839
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||||| |||| || | |||||||||||||||||||  ||||||||||||||||    
T  50716781 aaagcaaaacttaaaactgttaaaatgtgagagagtctgatggttgattatacataaga 50716839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 50796066 - 50796008
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||||||||| |||| || | |||||||||||||||||||  ||||||||||||||||    
T  50796066 aaagcaaaacttaaaactgttaaaatgtgagagagtctgatggttgattatacataaga 50796008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 43419942 - 43419905
Alignment:
Q  49 ctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    |||||||||||||||||||||||||| |||||||||||    
T  43419942 ctcaaaatccaaaattccatcgtttatacccatttttc 43419905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 47123328 - 47123369
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  47123328 ccctcaaaatccaaaatttcatcgttttgacccatttttcat 47123369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 47130694 - 47130735
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  47130694 ccctcaaaatccaaaatttcatcgttttgacccatttttcat 47130735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 4300125 - 4300054
Alignment:
Q  13 actcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| || |||||| |||||||| |||||| ||| ||||||||||||||| |||||||| ||| |||||||    
T  4300125 actcccatataagggacttcttacaggactccaccc-tcaaaatccaaaatttcatcgtttggacgcattttt 4300054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 11266573 - 11266617
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||    
T  11266573 actccgtccctcaaaatctaaaattccatcgtttagatccatttt 11266617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 47769603 - 47769647
Alignment:
Q  44 cgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||    
T  47769603 cgcccctcaaaatccaaaatttcattgtttaaacccatttttcat 47769647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 3351678 - 3351631
Alignment:
Q  236 caaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    ||||| ||||||| ||||||||||||||||  ||||||||||||||||    
T  3351678 caaaactgctgaattgtgagagagtctgatggttgattatacataaga 3351631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 41485921 - 41485865
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||  ||||||||||  ||||||||| ||||||    
T  41485921 aaagcaaaactcaaaactgctgaaatgtg--agagtctgatggttgattatatataaga 41485865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 41486101 - 41486058
Alignment:
Q  45 gcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| || ||||||||||||||||||| |||||||||||    
T  41486101 gcccctcaatattcaaaattccatcgtttagatccatttttcat 41486058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 46622429 - 46622373
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||  ||||||||||   |||||||||||||||    
T  46622429 aaagcaaaactcaaaactgctgaaatgtg--agagtctgatggctgattatacataaga 46622373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 3351825 - 3351795
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  3351825 atttttcatattctcagaaaaatccgaaaaa 3351795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 8657511 - 8657541
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  8657511 atttttcatattctcagaaaaatccgaaaaa 8657541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 8657655 - 8657709
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacat 279  Q
    |||| ||||||||||| ||||||||||||||||| ||||||   |||||||||||    
T  8657655 aaagtaaaactcaaaactgctgaaatgtgagagattctgatggctgattatacat 8657709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 19419734 - 19419800
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| || |||||| | || ||||||||||||||||||||| ||| |||||||| ||| |||||    
T  19419734 ttagaagagacttcttataggattccgcccctcaaaatccaaaactccttcgtttaggcccgttttt 19419800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 26053366 - 26053308
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| || |||||||||| ||||||||||   |||||||| ||||||    
T  26053366 aaagcaaaactcaaaactgttgaaatgtgatagagtctgatgactgattataaataaga 26053308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 35142467 - 35142497
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  35142467 atttttcatattctcagaaaaatccgaaaaa 35142497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 47123378 - 47123408
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  47123378 atttttcatattctcagaaaaatccgaaaaa 47123408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 47130744 - 47130774
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  47130744 atttttcatattctcagaaaaatccgaaaaa 47130774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 49095982 - 49095952
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  49095982 atttttcatattctcagaaaaatccgaaaaa 49095952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 50716647 - 50716677
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  50716647 atttttcatattctcagaaaaatccgaaaaa 50716677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 50796200 - 50796170
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  50796200 atttttcatattctcagaaaaatccgaaaaa 50796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 51258799 - 51258829
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  51258799 atttttcatattctcagaaaaatccgaaaaa 51258829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 109
Target Start/End: Complemental strand, 35345674 - 35345645
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaa 109  Q
    ||||||||||||||||||||||||||||||    
T  35345674 atttttcatattctcagaaaaatccgaaaa 35345645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 45711935 - 45711886
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaa 61  Q
    ||||| ||||||||||| |||||||  |||||| ||||||||||||||||    
T  45711935 gactctcttagaagggacttcttacgggactccacccctcaaaatccaaa 45711886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 8735402 - 8735476
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| |||||||||| | ||||||  ||||||||||| ||||||||||||||| |||  ||||||||| ||||||||    
T  8735402 gactaccttagaaggaacttcttaggagactccgccc-tcaaaatccaaaatttcat-atttagacccttttttcat 8735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 9087643 - 9087717
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| |||||||||| | ||||||  ||||||||||| ||||||||||||||| |||  ||||||||| ||||||||    
T  9087643 gactaccttagaaggaacttcttaggagactccgccc-tcaaaatccaaaatttcat-atttagacccttttttcat 9087717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 14828547 - 14828491
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    ||||||||| |||||| |||||||||| |||||| ||||||   |||||||||||||    
T  14828547 aaagcaaaattcaaaactgctgaaatgggagagattctgattgctgattatacataa 14828491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 28873537 - 28873577
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgat 265  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  28873537 aaagcaaaactcaaaactgttaaaatgtgagagagtctgat 28873577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 174220 - 174136
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| ||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  174220 aaggaccatgactcctgtagaagggacttcttacgagactccgcccctcaaaattcaaaattccatcgtttagacacatttttca 174136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 173989 - 173931
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  173989 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaga 173931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 3252 - 3170
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||| ||||||||||||| ||||||   ||| || ||||||||||||||||||||||||||||||||||||||||    
T  3252 aaggaccatgacccccttagaagggacttcttatgggaccccacccctcaaaatccaaaattccatcgtttagacccattttt 3170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 3014 - 2959
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacata 280  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  3014 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttgattatacata 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 23300 - 23358
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23300 ttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 23358  T

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Target: scaffold0137 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 9348 - 9278
Alignment:
Q  11 tgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatt 82  Q
    |||||||||||||||| | |||||||  |||||||||||||||||| |||||| ||||||||||||||||||    
T  9348 tgactcccttagaagg-acttcttacgggactccgcccctcaaaattcaaaataccatcgtttagacccatt 9278  T

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Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 141817 - 141771
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  141817 gactctgcccctcaaaatccaaaattccatcgtttagacccaatttt 141771  T

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Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 141624 - 141566
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| ||||||||| ||||||||||||||   | |||||||||||||    
T  141624 aaagcaaaactcaaaactgctgaaatatgagagagtctgatggctaattatacataaga 141566  T

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Target: scaffold0027; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 141755 - 141727
Alignment:
Q  82 ttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||    
T  141755 ttttcatattctcagaaaaatccgaaaaa 141727  T

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Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 140786 - 140860
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    |||||| ||||||||| || |||||| |||||||  |||| |||||||||||||||||| || ||||||||||||    
T  140786 aaggaccatgactcccataaaagggacttcttacgggacttcgcccctcaaaatccaaagtttcatcgtttagac 140860  T

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Target: scaffold0770 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 4319 - 4377
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||||    
T  4319 aaagcaaaactcaaaactgctgaaatgcgagagagactgatggctgattatacataaga 4377  T

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Target: scaffold0770; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 4122 - 4167
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  4122 actccgcccctcaaaatccaaaattccattgtttaaacctattttt 4167  T

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Target: scaffold0770; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 4185 - 4214
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  4185 tttttcatattctcagaaaaatccgaaaaa 4214  T

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Target: scaffold0564 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 4691 - 4745
Alignment:
Q  23 aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    |||||| |||||||  |||||| ||||||||||||||||||| ||||||||||||    
T  4691 aagggacttcttacgggactccacccctcaaaatccaaaattacatcgtttagac 4745  T

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Target: scaffold0564; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 4774 - 4804
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  4774 atttttcatattctcagaaaaatccgaaaaa 4804  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 102623 - 102681
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataaga 283  Q
    |||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||||    
T  102623 aaagcaaaactcaaaactgctgaaatgcgagagagactgatggctgattatacataaga 102681  T

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Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 102426 - 102471
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  102426 actccgcccctcaaaatccaaaattccattgtttaaacctattttt 102471  T

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Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 102489 - 102518
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  102489 tttttcatattctcagaaaaatccgaaaaa 102518  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 205952 - 205887
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||| |||||||  |||||||||| |||||||||||||||||||| ||||||||| |||||    
T  205952 ttagaaaggacttcttacgggactccgccc-tcaaaatccaaaattccatcatttagaccctttttt 205887  T

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Target: scaffold0016; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 205748 - 205672
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcata 89  Q
    |||||||||||||| || |||||||  |||||| ||| ||||||||||||||| |||| ||||||| | |||||||||    
T  205748 gactcccttagaagagacttcttacgggactccaccc-tcaaaatccaaaatttcatcatttagactcttttttcata 205672  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 421085 - 421029
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    ||||||||| |||||| | ||||||||||||||| ||||||  ||||||||||||||    
T  421085 aaagcaaaattcaaaactactgaaatgtgagagattctgattgttgattatacataa 421029  T

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