View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18068_low_85 (Length: 286)

Name: NF18068_low_85
Description: NF18068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18068_low_85
NF18068_low_85
[»] chr1 (39 HSPs)
chr1 (129-270)||(38504916-38505057)
chr1 (1-92)||(50970733-50970824)
chr1 (1-93)||(15646190-15646282)
chr1 (1-89)||(17433670-17433758)
chr1 (1-93)||(18984117-18984209)
chr1 (1-92)||(29869619-29869710)
chr1 (1-92)||(39154475-39154566)
chr1 (1-91)||(29306953-29307043)
chr1 (1-90)||(5539817-5539906)
chr1 (1-90)||(8678542-8678631)
chr1 (1-93)||(15173549-15173640)
chr1 (5-89)||(33144378-33144462)
chr1 (1-93)||(50970276-50970368)
chr1 (1-92)||(5540273-5540364)
chr1 (1-92)||(15646650-15646741)
chr1 (1-92)||(18984574-18984665)
chr1 (1-91)||(8678996-8679086)
chr1 (1-91)||(26859059-26859149)
chr1 (1-91)||(29307397-29307487)
chr1 (1-91)||(29870074-29870164)
chr1 (1-83)||(33143925-33144007)
chr1 (1-90)||(4636426-4636515)
chr1 (5-93)||(9018971-9019059)
chr1 (1-89)||(21856044-21856132)
chr1 (1-89)||(39154021-39154109)
chr1 (1-88)||(5963033-5963120)
chr1 (5-91)||(17433216-17433302)
chr1 (5-91)||(21856502-21856588)
chr1 (1-93)||(9019418-9019510)
chr1 (1-93)||(26859514-26859606)
chr1 (1-88)||(15173099-15173186)
chr1 (5-93)||(2733416-2733504)
chr1 (16-92)||(52268289-52268365)
chr1 (1-83)||(47827043-47827125)
chr1 (16-89)||(47826966-47827039)
chr1 (5-90)||(5962579-5962664)
chr1 (16-89)||(52269218-52269291)
chr1 (1-91)||(17112282-17112371)
chr1 (10-91)||(50419725-50419806)
[»] chr2 (37 HSPs)
chr2 (1-92)||(40027139-40027230)
chr2 (1-93)||(11090975-11091067)
chr2 (1-93)||(22374318-22374410)
chr2 (5-93)||(18451290-18451378)
chr2 (1-91)||(28616613-28616703)
chr2 (1-94)||(22374780-22374873)
chr2 (1-93)||(239351-239442)
chr2 (1-93)||(26538534-26538626)
chr2 (1-93)||(43058787-43058879)
chr2 (1-92)||(18450829-18450920)
chr2 (1-92)||(28617069-28617160)
chr2 (1-90)||(239807-239896)
chr2 (1-93)||(1978106-1978198)
chr2 (1-93)||(11090519-11090611)
chr2 (1-93)||(40815800-40815892)
chr2 (1-92)||(20444748-20444839)
chr2 (1-93)||(1978564-1978656)
chr2 (1-93)||(20440486-20440578)
chr2 (1-89)||(40815347-40815435)
chr2 (1-92)||(26538096-26538187)
chr2 (1-88)||(40027595-40027682)
chr2 (1-90)||(35781118-35781207)
chr2 (1-93)||(7446801-7446893)
chr2 (1-89)||(14432596-14432684)
chr2 (1-93)||(28847150-28847242)
chr2 (1-91)||(35779708-35779798)
chr2 (1-91)||(43058333-43058423)
chr2 (5-85)||(3025472-3025552)
chr2 (1-89)||(8972239-8972327)
chr2 (1-92)||(7446341-7446432)
chr2 (5-88)||(14432145-14432228)
chr2 (1-89)||(15551501-15551589)
chr2 (1-89)||(15552509-15552596)
chr2 (1-88)||(8425358-8425444)
chr2 (1-88)||(8425815-8425902)
chr2 (1-91)||(3025918-3026006)
chr2 (16-88)||(3824179-3824251)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-93)||(4791-4883)
scaffold0295 (1-89)||(5246-5334)
[»] chr6 (34 HSPs)
chr6 (1-93)||(23075583-23075675)
chr6 (1-93)||(2319670-2319762)
chr6 (1-93)||(12935155-12935247)
chr6 (5-93)||(20741098-20741186)
chr6 (1-93)||(22219808-22219900)
chr6 (1-88)||(10899942-10900029)
chr6 (3-93)||(1149463-1149553)
chr6 (1-91)||(10900385-10900475)
chr6 (1-93)||(11445442-11445534)
chr6 (1-93)||(18257135-18257227)
chr6 (1-92)||(15828096-15828187)
chr6 (1-92)||(23073998-23074089)
chr6 (1-93)||(11444985-11445077)
chr6 (1-92)||(20741559-20741650)
chr6 (1-91)||(11277037-11277127)
chr6 (1-91)||(18257592-18257682)
chr6 (2-91)||(1149888-1149977)
chr6 (1-93)||(12935612-12935704)
chr6 (1-93)||(28472635-28472727)
chr6 (1-93)||(29859824-29859916)
chr6 (1-88)||(18504922-18505009)
chr6 (1-92)||(31470314-31470405)
chr6 (1-90)||(31470771-31470860)
chr6 (1-88)||(2322673-2322760)
chr6 (1-91)||(4811372-4811462)
chr6 (1-91)||(4811711-4811801)
chr6 (1-90)||(18505374-18505463)
chr6 (8-89)||(29035099-29035180)
chr6 (1-89)||(29033436-29033524)
chr6 (3-92)||(11276589-11276678)
chr6 (17-90)||(15827639-15827712)
chr6 (1-88)||(3835181-3835268)
chr6 (1-93)||(18296143-18296235)
chr6 (35-91)||(22534214-22534270)
[»] chr5 (39 HSPs)
chr5 (1-93)||(18182968-18183060)
chr5 (1-93)||(2865210-2865302)
chr5 (1-93)||(18183424-18183516)
chr5 (1-93)||(19359591-19359683)
chr5 (1-91)||(8647438-8647528)
chr5 (1-93)||(8647893-8647985)
chr5 (1-93)||(15708969-15709061)
chr5 (1-92)||(29455197-29455288)
chr5 (1-91)||(5819384-5819474)
chr5 (1-93)||(5818927-5819019)
chr5 (1-93)||(8460928-8461020)
chr5 (5-93)||(15372332-15372420)
chr5 (1-93)||(24331557-24331649)
chr5 (1-92)||(8461386-8461477)
chr5 (1-92)||(29454739-29454830)
chr5 (1-91)||(19359136-19359226)
chr5 (5-95)||(24362295-24362385)
chr5 (1-92)||(16018588-16018679)
chr5 (1-92)||(25000544-25000635)
chr5 (1-89)||(2864756-2864844)
chr5 (1-89)||(14215243-14215331)
chr5 (5-93)||(14215702-14215790)
chr5 (1-91)||(164191-164281)
chr5 (1-91)||(4623148-4623238)
chr5 (1-90)||(4222177-4222266)
chr5 (8-91)||(15709431-15709513)
chr5 (1-93)||(164646-164738)
chr5 (1-89)||(15371873-15371960)
chr5 (5-85)||(24325218-24325298)
chr5 (5-85)||(24361843-24361923)
chr5 (1-93)||(14463975-14464067)
chr5 (1-93)||(16019042-16019134)
chr5 (1-73)||(25000108-25000180)
chr5 (8-91)||(4219663-4219746)
chr5 (15-90)||(6018315-6018390)
chr5 (16-91)||(7349487-7349562)
chr5 (16-91)||(7348559-7348634)
chr5 (1-89)||(24332017-24332107)
chr5 (16-85)||(6019241-6019309)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-92)||(28698-28789)
[»] chr7 (26 HSPs)
chr7 (1-91)||(35288903-35288993)
chr7 (1-92)||(37786766-37786857)
chr7 (1-91)||(19590525-19590615)
chr7 (1-93)||(2658837-2658929)
chr7 (1-93)||(19590980-19591072)
chr7 (1-93)||(19830418-19830510)
chr7 (1-93)||(32004612-32004704)
chr7 (1-93)||(34533789-34533881)
chr7 (1-93)||(35289356-35289448)
chr7 (1-93)||(38859096-38859188)
chr7 (1-93)||(23952728-23952821)
chr7 (1-91)||(32005069-32005159)
chr7 (1-94)||(34534246-34534339)
chr7 (1-93)||(37787222-37787314)
chr7 (1-93)||(38160949-38161041)
chr7 (1-92)||(19830874-19830965)
chr7 (1-92)||(38858642-38858733)
chr7 (1-90)||(28584377-28584466)
chr7 (1-78)||(29099863-29099940)
chr7 (1-93)||(2659295-2659387)
chr7 (1-93)||(4478155-4478247)
chr7 (1-88)||(29100306-29100393)
chr7 (1-88)||(4641899-4641983)
chr7 (1-88)||(4641443-4641530)
chr7 (1-85)||(23953184-23953268)
chr7 (1-93)||(28583437-28583529)
[»] chr3 (51 HSPs)
chr3 (1-91)||(39556032-39556122)
chr3 (1-93)||(31779107-31779199)
chr3 (1-92)||(39555577-39555668)
chr3 (1-88)||(41046703-41046790)
chr3 (1-91)||(32535418-32535508)
chr3 (1-93)||(4275819-4275911)
chr3 (1-93)||(17464489-17464581)
chr3 (1-93)||(48452987-48453079)
chr3 (1-92)||(30098218-30098309)
chr3 (1-91)||(25853234-25853324)
chr3 (1-93)||(5136978-5137070)
chr3 (1-93)||(5137436-5137528)
chr3 (1-93)||(20840558-20840650)
chr3 (1-93)||(43973895-43973987)
chr3 (1-92)||(20841016-20841107)
chr3 (5-91)||(29801356-29801442)
chr3 (1-91)||(37727385-37727475)
chr3 (1-93)||(29801871-29801963)
chr3 (1-92)||(27393660-27393751)
chr3 (1-92)||(37726928-37727019)
chr3 (1-91)||(43973441-43973531)
chr3 (7-92)||(31778652-31778737)
chr3 (1-93)||(22424812-22424904)
chr3 (1-92)||(23644461-23644552)
chr3 (1-92)||(27394032-27394123)
chr3 (1-88)||(32534962-32535049)
chr3 (1-87)||(22425268-22425354)
chr3 (1-91)||(23228463-23228552)
chr3 (1-91)||(23644920-23645010)
chr3 (7-93)||(24301017-24301103)
chr3 (1-89)||(25853682-25853770)
chr3 (5-93)||(26837815-26837902)
chr3 (1-93)||(30104480-30104572)
chr3 (7-90)||(51473429-51473512)
chr3 (8-93)||(51474796-51474881)
chr3 (1-92)||(17464947-17465038)
chr3 (1-88)||(26274570-26274657)
chr3 (1-90)||(32697155-32697244)
chr3 (16-93)||(37222041-37222118)
chr3 (1-89)||(25420596-25420684)
chr3 (16-88)||(25612447-25612519)
chr3 (1-91)||(50116864-50116954)
chr3 (1-93)||(26837358-26837450)
chr3 (1-93)||(37220555-37220647)
chr3 (1-88)||(24300560-24300646)
chr3 (1-93)||(26275021-26275113)
chr3 (1-93)||(45965936-45966028)
chr3 (9-88)||(32695706-32695785)
chr3 (1-88)||(41047154-41047239)
chr3 (16-90)||(25419145-25419219)
chr3 (16-93)||(49407794-49407871)
[»] scaffold0951 (2 HSPs)
scaffold0951 (1-106)||(2122-2227)
scaffold0951 (1-93)||(1665-1757)
[»] chr4 (52 HSPs)
chr4 (1-106)||(20470966-20471071)
chr4 (1-93)||(15523233-15523325)
chr4 (1-93)||(23494898-23494990)
chr4 (1-91)||(45082879-45082969)
chr4 (1-93)||(25447691-25447783)
chr4 (5-92)||(15523693-15523780)
chr4 (1-91)||(12234784-12234874)
chr4 (1-91)||(22434179-22434269)
chr4 (1-91)||(25447247-25447337)
chr4 (1-91)||(46193405-46193495)
chr4 (5-89)||(18763979-18764063)
chr4 (1-93)||(25937668-25937760)
chr4 (1-89)||(46193860-46193948)
chr4 (1-91)||(11153602-11153692)
chr4 (5-94)||(54995526-54995615)
chr4 (1-93)||(4220014-4220106)
chr4 (5-88)||(18751602-18751685)
chr4 (1-92)||(25938126-25938217)
chr4 (1-88)||(48526636-48526723)
chr4 (1-89)||(2118295-2118383)
chr4 (1-93)||(12234327-12234419)
chr4 (1-89)||(23494445-23494533)
chr4 (1-89)||(33109686-33109774)
chr4 (1-93)||(33109919-33110011)
chr4 (1-93)||(51021250-51021342)
chr4 (1-93)||(54995067-54995159)
chr4 (1-92)||(11153145-11153236)
chr4 (1-89)||(38962274-38962362)
chr4 (1-92)||(48526195-48526286)
chr4 (1-90)||(20958314-20958403)
chr4 (1-89)||(4219559-4219647)
chr4 (1-93)||(22434632-22434723)
chr4 (1-69)||(43243735-43243803)
chr4 (1-93)||(45082430-45082521)
chr4 (21-92)||(16318251-16318322)
chr4 (1-93)||(48713801-48713893)
chr4 (1-93)||(51020795-51020887)
chr4 (1-88)||(2118750-2118837)
chr4 (1-92)||(10258342-10258433)
chr4 (1-92)||(22170392-22170482)
chr4 (16-90)||(44890518-44890592)
chr4 (1-91)||(48294998-48295088)
chr4 (1-69)||(43281245-43281313)
chr4 (1-93)||(48293592-48293684)
chr4 (1-93)||(48708293-48708385)
chr4 (1-84)||(20957196-20957279)
chr4 (1-91)||(35363055-35363146)
chr4 (1-90)||(44892603-44892692)
chr4 (1-74)||(12503453-12503526)
chr4 (1-88)||(16690939-16691026)
chr4 (1-91)||(55189528-55189618)
chr4 (1-91)||(16691527-16691616)
[»] chr8 (26 HSPs)
chr8 (1-93)||(41681132-41681224)
chr8 (2-93)||(11656453-11656544)
chr8 (1-92)||(13225094-13225185)
chr8 (1-93)||(19176288-19176380)
chr8 (1-93)||(19176745-19176837)
chr8 (1-93)||(34541003-34541095)
chr8 (1-92)||(11656912-11657003)
chr8 (1-90)||(31133675-31133764)
chr8 (5-92)||(9930116-9930203)
chr8 (5-88)||(33328161-33328244)
chr8 (5-91)||(9178094-9178180)
chr8 (1-91)||(41681589-41681679)
chr8 (1-93)||(12571861-12571953)
chr8 (1-88)||(9928912-9928999)
chr8 (1-88)||(12572306-12572393)
chr8 (1-92)||(44831246-44831337)
chr8 (17-93)||(33742920-33742996)
chr8 (1-87)||(13224645-13224730)
chr8 (1-94)||(11336977-11337070)
chr8 (5-93)||(31133218-31133306)
chr8 (1-89)||(33328595-33328683)
chr8 (1-93)||(44831700-44831792)
chr8 (1-92)||(8074006-8074097)
chr8 (1-88)||(4630241-4630328)
chr8 (1-94)||(4629794-4629887)
chr8 (58-93)||(9177665-9177700)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1-91)||(11078-11168)
scaffold0417 (5-69)||(10643-10707)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-91)||(19076-19166)
scaffold0176 (1-92)||(18834-18925)
[»] scaffold0273 (2 HSPs)
scaffold0273 (1-94)||(4662-4755)
scaffold0273 (1-51)||(4243-4293)
[»] scaffold1223 (2 HSPs)
scaffold1223 (1-89)||(755-843)
scaffold1223 (1-91)||(1196-1286)
[»] scaffold0019 (1 HSPs)
scaffold0019 (2-93)||(134129-134220)
[»] scaffold1585 (1 HSPs)
scaffold1585 (1-90)||(568-657)
[»] scaffold0432 (2 HSPs)
scaffold0432 (1-88)||(10327-10414)
scaffold0432 (1-88)||(9935-10022)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-92)||(64301-64392)
scaffold0007 (1-88)||(64760-64847)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-88)||(8464-8551)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-93)||(42613-42705)
scaffold0027 (1-88)||(42172-42259)
[»] scaffold1696 (1 HSPs)
scaffold1696 (1-87)||(454-539)
[»] scaffold0057 (2 HSPs)
scaffold0057 (15-88)||(61927-62000)
scaffold0057 (17-93)||(61026-61102)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-74)||(16951-17024)


Alignment Details
Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 129 - 270
Target Start/End: Complemental strand, 38505057 - 38504916
Alignment:
Q  129 gtaagagtccacctctttctcaacttggtcactcacgtggacttcttcttatcttatctttcctccatcttttcgttctttgccgctaactcaaacgcag 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38505057 gtaagagtccacctctttctcaacttggtcactcacgtggacttcttcttatcttatctttcctccatcttttcgttctttgccgctaactcaaacgcag 38504958  T
Q  229 cacacaactcaaaactcacaatctccgttttcccaacttatt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38504957 cacacaactcaaaactcacaatctccgttttcccaacttatt 38504916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 50970733 - 50970824
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50970733 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15646282 - 15646190
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  15646282 ataattgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17433670 - 17433758
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  17433670 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18984209 - 18984117
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  18984209 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagccta 18984117  T

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Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29869710 - 29869619
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  29869710 ataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 39154475 - 39154566
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  39154475 ataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29307043 - 29306953
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||    
T  29307043 ataattgaaggaccgttttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5539906 - 5539817
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  5539906 ataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8678631 - 8678542
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  8678631 ataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15173549 - 15173640
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  15173549 ataattgaaggaccattttgttctgttttaaaagg-caggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 33144378 - 33144462
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  33144378 ttgaaggtccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 50970368 - 50970276
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||| |||||||| ||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  50970368 ataattgaaggaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5540273 - 5540364
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| |||| ||||||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  5540273 ataattgaaggaccgttttcttctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15646650 - 15646741
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||||||||||||||| | || ||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  15646650 ataattgaaggaccgttttgttctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 18984574 - 18984665
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | ||||||||||||||||||||||    
T  18984574 ataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 8678996 - 8679086
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  8678996 ataattgaatgacctttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26859149 - 26859059
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  26859149 ataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29307397 - 29307487
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||||| |||||||||    
T  29307397 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29870074 - 29870164
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  29870074 ataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33144007 - 33143925
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgta 83  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  33144007 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4636426 - 4636515
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||| | ||||||||||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  4636426 ataattgaaggatcgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 9019059 - 9018971
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||| |||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  9019059 ttgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagccta 9018971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21856132 - 21856044
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||| |||||||||||||||||||    
T  21856132 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39154109 - 39154021
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||||| |||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  39154109 ataattgcaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5963033 - 5963120
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||||||| |||  ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  5963033 ataattgaaagactgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 17433302 - 17433216
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||| |||||||||||||||||||||||||  ||||||| | |||||||||||||| || |||||||||||||||||||||    
T  17433302 ttgaaggaccgttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 21856502 - 21856588
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||| |||||||||||||||||| |||| || ||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  21856502 ttgaaggaccgttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9019418 - 9019510
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| |||||||||||||||||| ||||  |||||||| || |||||| |||||||||| |||||||||||||||||||||||    
T  9019418 ataattgaatgaccgttttgttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 9019510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26859514 - 26859606
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| | ||||||||||||||||||||| ||  |||||||| ||||| ||||||||||| || ||||||||||||||||||||    
T  26859514 ataattgaaggaccgtattgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15173186 - 15173099
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||| ||| ||||||||  ||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  15173186 ataattgaagaaccgttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 2733416 - 2733504
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||  | ||||||||||||| | |||||||||| ||||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagccta 2733504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 52268365 - 52268289
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||||||||||||||||| ||||| |||||| || ||||||||| |||| ||||||||||||||||||||||    
T  52268365 ttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 47827043 - 47827125
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgta 83  Q
    |||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||| |  || ||||||||||    
T  47827043 ataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||||| | ||||||||||||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 5962664 - 5962579
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    ||||| |||| ||||||||||||||||||||||  |||||||||||| | ||| ||| ||||||| |||||||| |||||||||||    
T  5962664 ttgaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 52269218 - 52269291
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||||||||||||  |||  |||| | |||| | |||||||||| |||||||||||||||||||    
T  52269218 ttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggaccaaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17112371 - 17112282
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||||||| ||||| |||| |||||||||||| | |||| |||| | |||||  ||||||| ||  ||||||||||||||||||||    
T  17112371 ataattgaaggactattttattctattttaaaagggcct-accaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 50419725 - 50419806
Alignment:
Q  10 ggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||| ||||||||  |||||||| |||| ||||| |||||| ||| || | |||  ||||||||||||||| |||||||||    
T  50419725 ggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaagcc 50419806  T

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Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 40027230 - 40027139
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40027230 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 40027139  T

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Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 11090975 - 11091067
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11090975 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11091067  T

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Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22374410 - 22374318
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  22374410 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374318  T

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Target: chr2; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 18451290 - 18451378
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18451290 ttgaaggactattttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18451378  T

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Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 28616703 - 28616613
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  28616703 ataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28616613  T

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Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22374780 - 22374873
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcctac 94  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  22374780 ataattgaaggaccgttttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctac 22374873  T

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Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 239442 - 239351
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  239442 ataattgaaggaccgttttgttctgttttaaaagg-caggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagccta 239351  T

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Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26538534 - 26538626
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  26538534 ataattgaaggaccgttttgttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 26538626  T

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Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43058787 - 43058879
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  43058787 ataattgaaggaccattttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 43058879  T

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Target: chr2; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18450920 - 18450829
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  18450920 ataattgaaggaccgttttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18450829  T

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Target: chr2; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28617069 - 28617160
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  28617069 ataattgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28617160  T

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Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 239807 - 239896
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||| |||||    
T  239807 ataattgaaggaccattttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

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Target: chr2; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1978198 - 1978106
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||| | |||||||| ||||||||||||||    
T  1978198 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagccta 1978106  T

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Target: chr2; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11090611 - 11090519
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  11090611 ataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 11090519  T

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Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 40815800 - 40815892
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  40815800 ataattgaagggccgttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 40815892  T

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Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 20444839 - 20444748
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  20444839 ataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 20444748  T

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Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 1978564 - 1978656
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  1978564 ataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagccta 1978656  T

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Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 20440486 - 20440578
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||| |||| |||| ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  20440486 ataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 20440578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 40815435 - 40815347
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||| ||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  40815435 ataattgaagaaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 26538187 - 26538096
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||||||||  ||||||||||||||||||||||  ||||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  26538187 ataattgaaggaccgctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40027595 - 40027682
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  40027595 ataattgaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 35781118 - 35781207
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    ||||||||||||   ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| || |||||||||||||||||    
T  35781118 ataattgaaggatagttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7446801 - 7446893
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| | |||||||||| || ||||| ||||||||||||||    
T  7446801 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagccta 7446893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14432596 - 14432684
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||    
T  14432596 ataattgaagaaccattttattctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28847150 - 28847242
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||    
T  28847150 ataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaaatgtaattaagccta 28847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35779798 - 35779708
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||| |||||| |||| | |||||||||| |||||||||||||||||||||    
T  35779798 ataattgaaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43058423 - 43058333
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||| || ||| ||||||||||||| || ||||||||||||||||||    
T  43058423 ataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 3025552 - 3025472
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaat 85  Q
    |||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| |||||||| ||||||    
T  3025552 ttgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8972327 - 8972239
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||| |||||| || | |||||||||||| |||||||||||||||||||    
T  8972327 ataattgaatgacaattttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7446432 - 7446341
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||| |||| | ||||| ||||||||||| || |||||||||||||||||||    
T  7446432 ataattgaatgaccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 14432228 - 14432145
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||| ||||||| | ||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  14432228 ttgaaggaccgttttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15551589 - 15551501
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||| ||||||||  ||||||| |||||||||| |||||||||| |||||| ||||  ||||||||||| |||||||||||||||||||    
T  15551589 ataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15552509 - 15552596
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||||||| ||| |||||||||||||||||||||||  || || |||||| ||||||||||||||  |||||||||||||||||||||    
T  15552509 ataattgaatgacaattttgttctgttttaaaagggcg-gatcattttcgtgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

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Target: chr2; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8425444 - 8425358
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||| ||| |||||||||||||||||| || | ||||| |||||| ||||||||||||||| | ||||||||||||||||||    
T  8425444 ataattgaag-accgttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

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Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8425815 - 8425902
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||  ||||||||| ||||||||||||| ||||| |||||| ||||| ||||||||| |  |||||||||||||||||    
T  8425815 ataattgaaggacagttttgttctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

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Target: chr2; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3025918 - 3026006
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||| |||||||||||||||  |||| |||||| |||| |||||||||||| |||||||| ||||||||||||    
T  3025918 ataattgaaggaccgttttgtt-tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagcc 3026006  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 3824179 - 3824251
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||||||  ||| ||||||||||||||| |||||| ||| ||  ||||  |||||||||||||| |||||||    
T  3824179 ttttgttcgatttaaaaagggcatgaccaatttcgtgagttggttaaaatgcgatgaccaaaagtataattaa 3824251  T

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Target: scaffold0295 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4883 - 4791
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  4883 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4791  T

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Target: scaffold0295; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5246 - 5334
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||  ||| |||| ||||||||||||||| || |||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  5246 ataattgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

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Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23075583 - 23075675
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  23075583 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23075675  T

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Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 2319762 - 2319670
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  2319762 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccta 2319670  T

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Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12935247 - 12935155
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  12935247 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 12935155  T

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Target: chr6; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 20741186 - 20741098
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  20741186 ttgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20741098  T

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Target: chr6; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22219808 - 22219900
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  22219808 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22219900  T

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Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10900029 - 10899942
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10900029 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

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Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 1149553 - 1149463
Alignment:
Q  3 aattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 1149463  T

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Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 10900385 - 10900475
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  10900385 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

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Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 11445442 - 11445534
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11445442 ataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11445534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18257227 - 18257135
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  18257227 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15828096 - 15828187
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  15828096 ataattgaaggaccgttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23074089 - 23073998
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  23074089 ataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

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Target: chr6; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11445077 - 11444985
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11445077 ataattgaaggaccattttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20741559 - 20741650
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||||| |||||| |||||||||||||||    
T  20741559 ataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11277037 - 11277127
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  11277037 ataattgaagaaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 18257592 - 18257682
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |||||||||| ||||||||||    
T  18257592 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 1149888 - 1149977
Alignment:
Q  2 taattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||||    
T  1149888 taattgaaggaccgttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

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Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12935612 - 12935704
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||| || |||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  12935612 ataattgaaggaccgttttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28472727 - 28472635
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  28472727 ataattgaatgaccattttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 28472635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 29859916 - 29859824
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  29859916 ataattgaatgaccattttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 29859824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18505009 - 18504922
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||| ||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  18505009 ataattgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31470405 - 31470314
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||| |||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||||||||||||    
T  31470405 ataattgaatgactgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31470771 - 31470860
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||||| ||||||| | ||||||||||||||||||||    
T  31470771 ataattgaaggaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2322673 - 2322760
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| |||||||||||||||||| |||| ||| |||||||| ||||| ||||||||||| ||||||||||||||||||    
T  2322673 ataattgaaggaccgttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4811462 - 4811372
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||||||| ||||| |||||| ||   |||||||||||||||||||||    
T  4811462 ataattgaaggaccgttttattctattttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4811711 - 4811801
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||  |||||| ||||||| | ||||||||||||||||| || ||||||| ||||||||||    
T  4811711 ataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18505374 - 18505463
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||||  ||||||| ||||||||||||||| || ||||||||| ||||| ||||||||||| |||||||||| |||||||||    
T  18505374 ataattgaaggactgttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 29035099 - 29035180
Alignment:
Q  8 aaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||| ||||||||||||||||||||||||| |||| |||||| ||||||| ||||||||| ||| |||||||||||||||    
T  29035099 aaggacaattttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29033524 - 29033436
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||| ||||||||  ||||||||||||||||||||||| ||||| |||||| || ||||||||| |||| |||||||||||||||||||    
T  29033524 ataactgaaggacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 11276678 - 11276589
Alignment:
Q  3 aattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||||||||||||||||||||||| | || ||||||| | ||||| ||||||||||  ||| ||| ||||||||||||||    
T  11276678 aattgaaggaccattttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 15827712 - 15827639
Alignment:
Q  17 tttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||| |||||||||||| ||  ||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  15827712 tttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3835181 - 3835268
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||| |||||| ||||||||||||||||||  |||| ||||| |||||| |||||| ||||||||   ||||||||||||||||||    
T  3835181 ataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18296235 - 18296143
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||| ||||||||  |||||||||||||||||||||||  | || ||| || |||| | |||||||||| ||| |||| | ||||||||||||    
T  18296235 ataaatgaaggacggttttgttctgttttaaaagggcaatatcaattttgtgagtaagtcaaaacacgaggactaaaattataattaagccta 18296143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 22534214 - 22534270
Alignment:
Q  35 ggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||| ||||| |||||| ||| || ||||| |||| |||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18183060 - 18182968
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  18183060 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2865210 - 2865302
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2865210 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18183424 - 18183516
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  18183424 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18183516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19359591 - 19359683
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  19359591 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8647528 - 8647438
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  8647528 ataattgaaggaccattttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 8647893 - 8647985
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  8647893 ataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 8647985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15709061 - 15708969
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||||||    
T  15709061 ataattgaaggaccgttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagccta 15708969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29455197 - 29455288
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||    
T  29455197 ataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5819384 - 5819474
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  5819384 ataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 5819019 - 5818927
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  5819019 ataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8461020 - 8460928
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  8461020 ataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 15372332 - 15372420
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  15372332 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 15372420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24331649 - 24331557
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||| |||||||||||||||||||||||    
T  24331649 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagccta 24331557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8461386 - 8461477
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||||||||||||| ||| || ||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  8461386 ataattgaaggaccgttttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29454830 - 29454739
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  29454830 ataattcaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19359226 - 19359136
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  19359226 ataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 24362295 - 24362385
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcctacg 95  Q
    |||||||||| |||| |||||||||||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  24362295 ttgaaggaccgttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcctacg 24362385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16018679 - 16018588
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||| |||||||||||||||| || |||||| | ||||||||||||||| ||||||||||||||||||||||    
T  16018679 ataattgaaggaccgttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25000544 - 25000635
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||| ||||||||||||||||||||||||  |||||||| |||||| |||||||||||||| || ||||||||||||||||||||||    
T  25000544 ataattgaatgaccattttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2864844 - 2864756
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||| ||||||| |||||||||||||||||| || |||||| ||||||||||||||| | |||||||||||||||||||    
T  2864844 ataattgaaggaccgttttgttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14215331 - 14215243
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||| ||||||||| ||||||||||||||||||||| || ||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  14215331 ataactgaaggacctttttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 14215702 - 14215790
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||| |||||| |||||||||| |||||||| ||||||||||||||    
T  14215702 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagccta 14215790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 164281 - 164191
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||| |||| ||||||| |||| |||||||||| |||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  164281 ataattgaatgaccgttttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4623238 - 4623148
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||||||| ||||||||||||||||||  |||| ||||| |||||| |||| | ||||||||||||||||||||||||||||||||    
T  4623238 ataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4222177 - 4222266
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||| |||| ||| |||||||||||||||||||||||||||||| |||||| || || ||||||||||| ||||||||||||||||||||    
T  4222177 ataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 15709431 - 15709513
Alignment:
Q  8 aaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||| ||||||||||||||||| ||||||||| |||||| | ||||||||||||||| |||||||||||||||||||||||    
T  15709431 aaggaccgttttgttctgttttaaa-gggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 164646 - 164738
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| || ||| |||||||||| || || ||||| | ||||||||||||    
T  164646 ataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagccta 164738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15371960 - 15371873
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||||||||||||||||||||||||||| |||||  ||||| ||||| |||||| |||| || ||||||||||||||||    
T  15371960 ataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 24325298 - 24325218
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaat 85  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||  ||||||||||||| |  |||||||||||||||    
T  24325298 ttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 24361923 - 24361843
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaat 85  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||  ||||||||||||| |  |||||||||||||||    
T  24361923 ttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14463975 - 14464067
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||| | ||||||||| |||||||||| ||  |  |||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  14463975 ataattgaaggatcgttttgttctattttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16019042 - 16019134
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||| |||||||| |||| ||||||||| ||| ||||| |||||| |||| ||||||||| || |||||||||||||||||| ||||    
T  16019042 ataattgaagaaccattttattctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaaccta 16019134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25000180 - 25000108
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgac 73  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||  ||||| |||||||||||||||||||||    
T  25000180 ataattaaaggaccattttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacgatgac 25000108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 4219746 - 4219663
Alignment:
Q  8 aaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||| | ||||||||||||||||| |||||||||| ||| |||| ||| ||||||||||| || ||||||||||||||||||    
T  4219746 aaggacaactttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggatcaaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 6018390 - 6018315
Alignment:
Q  15 attttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||  ||||||| |||||||||||    
T  6018390 attttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 7349487 - 7349562
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||| ||||||||||| ||| ||||| |||||| ||||| ||||||||||| |||||||||||||||||||||    
T  7349487 ttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 7348634 - 7348559
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||||||||||||||||| ||||| |||||| ||||| | |||||| || |||||||| ||||||||||||    
T  7348634 ttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaacatgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24332017 - 24332107
Alignment:
Q  1 ataattgaaggaccattttgttctgtttt-aaaagggcatgaccagtttcgtaagtaggccaaaacacgatgacc-aaaagtgtaattaag 89  Q
    ||||||| |||||| |||||||||||||| |||| |||| || ||||||||| |||| ||||||||| ||||||| |||||||||||||||    
T  24332017 ataattgcaggaccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 6019241 - 6019309
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaat 85  Q
    ||||||||||||||||||| ||| || ||||||||| |||| ||||||||| ||||||||||| ||||||    
T  6019241 ttttgttctgttttaaaagagcaagatcagtttcgtgagta-gccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28698 - 28789
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28698 ataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattatgcct 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35288993 - 35288903
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  35288993 ataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37786857 - 37786766
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37786857 ataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19590615 - 19590525
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  19590615 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 2658929 - 2658837
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  2658929 ataattgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagccta 2658837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19590980 - 19591072
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  19590980 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagccta 19591072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19830510 - 19830418
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  19830510 ataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32004704 - 32004612
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  32004704 ataattgaaggaccattttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 32004612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 34533881 - 34533789
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  34533881 ataattgaatgaccattttattctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 35289356 - 35289448
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  35289356 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 35289448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38859096 - 38859188
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  38859096 ataatggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 38859188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23952821 - 23952728
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagta-ggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| || |||||||||| |||||||||||||||||||||||    
T  23952821 ataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagccta 23952728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 32005069 - 32005159
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  32005069 ataattaaaggaccgttttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34534246 - 34534339
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcctac 94  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| |||||||||||||||||  ||||||||| |||||||||||||    
T  34534246 ataattgaaggaccgttttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagcctac 34534339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 37787222 - 37787314
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||| ||| |||||||||| |||||||| ||| |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  37787222 ataattgaagaaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 37787314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 38161041 - 38160949
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||||||| |||||||||||||||||||||||| ||  | |||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  38161041 ataattgaaggacaattttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggaccaaaagtgtaattaagccta 38160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19830874 - 19830965
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||| ||| ||||||| |||||||||||| || ||||||||| || ||||||||||||||||| ||||||||||||||||||||||    
T  19830874 ataattgaagtaccgttttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38858733 - 38858642
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||| |||| ||||||||||||||||||| ||| |||||||||||| |||| |||||||||||| |||||||||||| |||||||||    
T  38858733 ataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28584377 - 28584466
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| |||||| | ||||||||| ||||| ||| ||||||||||||||||    
T  28584377 ataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29099940 - 29099863
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaa 78  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||    
T  29099940 ataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2659295 - 2659387
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||| | | ||||||||||| ||| |||||||| ||||||||||||||    
T  2659295 ataattgaatgaccgttttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagccta 2659387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4478155 - 4478247
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||||||| || || |||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||| |||| ||||    
T  4478155 ataattgaaggacaatgttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29100306 - 29100393
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||| ||| || ||||| ||||||||||| ||||||||||||||||||    
T  29100306 ataattgaaagaccgttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4641899 - 4641983
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| |||||||||||||||||||| || |||||||   || ||||||||||||||||| ||||||||||||||||||    
T  4641899 ataattgaaggaccgttttgttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4641530 - 4641443
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||||||| |||| ||||||| ||||| ||||| ||| |||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  4641530 ataattgaatgaccgttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23953184 - 23953268
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaat 85  Q
    |||||||||||||| |||||||||||||| |||||||  |||||||||||| |||||  |||||||||| |||||||| ||||||    
T  23953184 ataattgaaggaccgttttgttctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28583529 - 28583437
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||  |||| || |||||||||||||||  |||| | || | ||||||||||||||||| |||||||||||||||||||||||    
T  28583529 ataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 39556032 - 39556122
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  39556032 ataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31779107 - 31779199
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  31779107 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 39555668 - 39555577
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  39555668 ataattgaaggaccattttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41046790 - 41046703
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  41046790 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 32535418 - 32535508
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  32535418 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4275819 - 4275911
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  4275819 ataattaaaggaccgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17464581 - 17464489
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||||||||||||||    
T  17464581 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagccta 17464489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48453079 - 48452987
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  48453079 ataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagccta 48452987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30098218 - 30098309
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||| ||||||||||||||||||||||    
T  30098218 ataattgaaggaccattttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25853324 - 25853234
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||    
T  25853324 ataattgaaggaccgttttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 5137070 - 5136978
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  5137070 ataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5137436 - 5137528
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  5137436 ataattgaaggaccattttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 5137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 20840650 - 20840558
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  20840650 ataattgaaggaccgttttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20840558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43973895 - 43973987
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  43973895 ataattgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 43973987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20841016 - 20841107
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  20841016 ataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 29801442 - 29801356
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  29801442 ttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgaccaaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 37727385 - 37727475
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  37727385 ataattgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 29801871 - 29801963
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||| || ||||||||||||||||||||    
T  29801871 ataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagccta 29801963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27393751 - 27393660
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||| || |||||| |||||||||| ||||||||||||||||||||||    
T  27393751 ataattgaaggaccgttttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37727019 - 37726928
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||| |||||||||||||||  |||||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  37727019 ataattgaaggaccgttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43973531 - 43973441
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| |||||||||||||||||||||||| | || |||||| |||||| |||||||||| |||||||||||||||||||||    
T  43973531 ataattgaaggaccgttttgttctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 31778737 - 31778652
Alignment:
Q  7 gaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||| ||||||||||||||||||||||| |||||||||| | ||||| ||||||||||| ||||||||||||||||||||||    
T  31778737 gaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22424904 - 22424812
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||  ||||||||  ||||||||||||||||||||||    
T  22424904 ataattgaaggaccgttttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagccta 22424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23644552 - 23644461
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||  |||||||||||||||||| |||| ||||| |||||| |||||||||||| |||| ||||||||||||||||||||||    
T  23644552 ataattgaaggactgttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27394032 - 27394123
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||| | |||||||||||||||||| |||| ||||  |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  27394032 ataattgaaggatcgttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32535049 - 32534962
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| |||||||||||||||||| |||| ||||| |||||| |||| |||||||||||| ||||||||||||||||||    
T  32535049 ataattgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22425268 - 22425354
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaatta 87  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||    
T  22425268 ataattgaagtaccgttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 23228463 - 23228552
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||||||| ||||||||| ||||||||||||||||| || |||||| ||||||||||||||||  |||||||||||||||||||||    
T  23228463 ataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgtgagtaggccaaaacacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 23644920 - 23645010
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||| |||| ||||||||||||||||||||| | ||||| |||||| ||||||||||||||||| |||||||||| ||||||||||    
T  23644920 ataattgaatgaccgttttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 24301017 - 24301103
Alignment:
Q  7 gaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||| ||||||| |||||||||| |||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  24301017 gaaggaccgttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 24301103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25853682 - 25853770
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||||||||||||||||||||||||||||||| | || |||||||||||| |||||  |||||||||| || ||||||||||||||||    
T  25853682 ataattgaaggaccattttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 26837815 - 26837902
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||| |||| ||||||||| ||||||| |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26837815 ttgaatgaccgttttgttctattttaaa-gggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 26837902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 30104572 - 30104480
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| || | || ||||||||||||||| ||||| |||||| |||||| |||||||||| |||||||||||||||||||||||    
T  30104572 ataattgaaggaccgttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 30104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 51473512 - 51473429
Alignment:
Q  7 gaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||| | ||| ||||||||||| ||||||||||||||||||||    
T  51473512 gaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaaaagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 51474796 - 51474881
Alignment:
Q  8 aaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||| |||||||| ||||||||||||||||||||| |||||| |||| |||||||||||   ||||||||||||||||||||||    
T  51474796 aaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaacacgggaaccaaaagtgtaattaagccta 51474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17464947 - 17465038
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||| |||||||||||   |||||||||| |  |||||||||||||||| |||||||| |||||||||||||    
T  17464947 ataattgaaggaccgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26274657 - 26274570
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||| |||||| || | || ||||| |||||||||    
T  26274657 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 32697155 - 32697244
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||| || ||||||||||||||||||||||| |||| | |||||| ||||||| ||||||||| |||||||| | |||||||||    
T  32697155 ataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 37222041 - 37222118
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||||||| |||| ||||| ||| || |||||| |||||||||| |||||||||||||||||||||||    
T  37222041 ttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25420596 - 25420684
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||||||||||| ||||| |||| |||||||||||| ||| || |||||| |||||| ||||| ||||||| ||||||||||||||||    
T  25420596 ataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 25612447 - 25612519
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||||||| ||||||||||||| ||||| |||||| |||||| |||||||||| ||||||||||||||||||    
T  25612447 ttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 50116864 - 50116954
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||| |||| |||| ||||||||| ||| ||||||||||||||| |||||| |||| | |||||||||| || ||||||||||||||||||    
T  50116864 ataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26837450 - 26837358
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||| ||| |||| |||||||||| ||||| |||||| |||||||||||| || | |||||||| ||||||||| ||||    
T  26837450 ataattgaaggaccgtttcgttatgttataaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37220647 - 37220555
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||| |||||||| ||||| |||||||||||||| |||||| |  | | || |||||||||||| |||| |||||||||||||||||||||||    
T  37220647 ataactgaaggacaattttattctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 37220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24300646 - 24300560
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||| ||| |||| ||||||||||||||| || |||||||||||| | || |||||||||||| |||||||| |||||||||    
T  24300646 ataattgaagaaccgttttattctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26275021 - 26275113
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||| ||||| |||| |||||||||||||||| | |||||||||||| |||||| |||||||| | | |||||| | ||||||| ||||    
T  26275021 ataattgagggaccgttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaaaccta 26275113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 45966028 - 45965936
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||| |||||||  ||||||| ||||||||||| ||| ||  |  ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  45966028 ataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 32695785 - 32695706
Alignment:
Q  9 aggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||| ||||||||||||||||||| | ||| | || ||||||||||||||||||| | || |||||||| |||||||||    
T  32695785 aggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaaatatgaggaccaaaaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41047154 - 41047239
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||  |||| ||||||||||||||| ||  ||||||||||| |||||||||||||| || || | |||||||||||||    
T  41047154 ataattgaaggacg-ttttattctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 25419219 - 25419145
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||||||||||||||  || | |||||| |||| || ||||||||| |||||||||| |||| ||||    
T  25419219 ttttgttctgttttaaaagggcagaactaatttcgtgagtaagctaaaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 49407871 - 49407794
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| ||| |||  |||||||||| |||||| ||  || |||||  ||| |||||||||||||||||||||||    
T  49407871 ttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagccta 49407794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 2122 - 2227
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcctacgggata 100  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |  |||    
T  2122 ataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaagttata 2221  T
Q  101 tatatt 106  Q
    ||||||    
T  2222 tatatt 2227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1757 - 1665
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  1757 ataattgaaggaacattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20470966 - 20471071
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcctacgggata 100  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |  |||    
T  20470966 ataattgaatgaccgttttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaagttata 20471065  T
Q  101 tatatt 106  Q
    ||||||    
T  20471066 tatatt 20471071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15523325 - 15523233
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  15523325 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23494898 - 23494990
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  23494898 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 45082879 - 45082969
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  45082879 ataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25447691 - 25447783
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  25447691 ataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 15523693 - 15523780
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  15523693 ttgaaggaccattttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12234784 - 12234874
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  12234784 ataattgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 22434269 - 22434179
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  22434269 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25447337 - 25447247
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  25447337 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 46193495 - 46193405
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||    
T  46193495 ataattgaaggacctttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 18763979 - 18764063
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  18763979 ttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 25937760 - 25937668
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||    
T  25937760 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagccta 25937668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46193860 - 46193948
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||    
T  46193860 ataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11153602 - 11153692
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||| | |||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  11153602 ataattgaaggaacgttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 54995526 - 54995615
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcctac 94  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  54995526 ttgaaggaccgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctac 54995615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4220014 - 4220106
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  4220014 ataattgaatgaccattttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 4220106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 18751685 - 18751602
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||| |||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||    
T  18751685 ttgaaggaccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25938126 - 25938217
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | ||||||||||||||||||||||    
T  25938126 ataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 25938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 48526636 - 48526723
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||| |||||||    
T  48526636 ataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2118383 - 2118295
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  2118383 ataattgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12234419 - 12234327
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| | || ||||||||| || |||||||||||||||||||||||    
T  12234419 ataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagccta 12234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 23494533 - 23494445
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||| ||||||||||    
T  23494533 ataattgaaggaccgctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33109774 - 33109686
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||||| |||| |||||||||||| |||||||| ||||||||||    
T  33109774 ataattgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33109919 - 33110011
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||| |||||| || ||||||||||| || |||||||||||||||||||||||    
T  33109919 ataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaacatgaggaccaaaagtgtaattaagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 51021250 - 51021342
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||| ||||||| ||||||| ||||||||||||||| ||||| |||||| ||||||||||||||||| || ||||||||||||||||||||    
T  51021250 ataattaaaggaccgttttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 54995159 - 54995067
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||| | ||| |||||||| |||||||||| |||||| |||||||||||||||||| ||||    
T  54995159 ataattgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11153236 - 11153145
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| |||| |||| ||||||||||||||||||| ||| || ||||||||||||||||| |||||||||| |||||||||||    
T  11153236 ataattgaaggaccgttttattctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38962274 - 38962362
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||| | ||| ||||||||||| |||||||| ||||||||||    
T  38962274 ataattgaaggaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 48526286 - 48526195
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| |||||||||||||||||||||||   |||||||| | |||||| ||||||||||  |||||||||||||||||||||    
T  48526286 ataattgaaggaccgttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 20958314 - 20958403
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||||   |||||||||||||||||||||| ||||| |||||| |||||||||||| |||| ||| ||||||||||||||||    
T  20958314 ataattgaaggacatatttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4219647 - 4219559
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||  ||||||| | |||||||| |||| |||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  4219647 ataattgaaggactgttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22434632 - 22434723
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| ||||||||||||| |||| |||| |||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||    
T  22434632 ataattgaatgaccgttttgttctgttt-aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaaccta 22434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43243735 - 43243803
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacga 69  Q
    |||||||||| || |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43243735 ataattgaagaacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacga 43243803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 45082521 - 45082430
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||| |||||||||||||  ||||||| ||| ||||| ||||||||||||||||||||| |||||||| ||||    
T  45082521 ataattgaaggaccgttttgttctattttaaaagggcaaaaccagtt-cgtgagtagaccaaaacacgatgaccaaaagcgtaattaaaccta 45082430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 16318251 - 16318322
Alignment:
Q  21 ttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||||||| || |||||| || ||||||||||||||||| ||||||||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 48713801 - 48713893
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||| | ||||||| |||||||||  |  |||||||||||||| ||||    
T  48713801 ataattgaaggacaattttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaaaagtgtaattaaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 51020887 - 51020795
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||| || | |  ||||||||| || || ||||||||||||||||||||    
T  51020887 ataattgaaggatcgttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagccta 51020795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2118750 - 2118837
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||||||| |||| ||||||| ||||||||||||  | |||||||||| | || |||||||||||||| ||||||||||||||||||    
T  2118750 ataattgaatgaccgttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10258342 - 10258433
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||  || |||||  ||||||||||||||||| ||||| |||| | ||||||||| ||||||| ||||||||||||||||||||||    
T  10258342 ataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaacacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22170392 - 22170482
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||| |||| ||||||| |||||||||| |||| ||| | |||||| |||||| |||||||||| ||||||||||||||||||||||    
T  22170392 ataattgaatgaccgttttgttttgttttaaaaaggcaggacaa-tttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 44890592 - 44890518
Alignment:
Q  16 ttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    ||||||||||||||||||||||||||||| |||||| | |||| |||||||| | |||||||| |||||||||||    
T  44890592 ttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 48294998 - 48295088
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||| ||| |||||||| |||||||||  |||| ||||| |||||| |||||  ||||||||||||||||||| ||||||||||||    
T  48294998 ataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaaacacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43281245 - 43281313
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacga 69  Q
    |||||||||| ||  |||||||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  43281245 ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaacacga 43281313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48293684 - 48293592
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||| || |||||||| |||||||||  | || || || |||||| |||| |||||||||||| |||||||||||||||||||||||    
T  48293684 ataattgaagaacaattttgttttgttttaaagagacaggatcaatttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagccta 48293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48708385 - 48708293
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||  ||||||| ||||||||||||||| || || ||||||   |||||||||||||   |||||||||||||||||||||||    
T  48708385 ataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaattaagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20957279 - 20957196
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaa 84  Q
    ||||||||||||| |||||||| ||||||||||| | ||||||| |||||| |||| |||||||| ||| |||||||| |||||    
T  20957279 ataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtgagtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 35363055 - 35363146
Alignment:
Q  1 ataattgaaggaccattttgttctgtttt-aaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||| |||| ||||||| | |||| ||||| |||  ||||||||||| ||||||||||||||||| || ||||||||||||||||||    
T  35363055 ataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 44892603 - 44892692
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    ||||||||| |||  |||||||||||||||||| ||||  |||| |||||| |||||| |||||||||| |||||||| | |||||||||    
T  44892603 ataattgaaagacagttttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12503526 - 12503453
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgacc 74  Q
    ||||||||||||| ||||||||||||||||||| |||  || ||||||||| |||| | |||||||||| ||||    
T  12503526 ataattgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16691026 - 16690939
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||||||||||  |||||||| |||||||||  |||| ||||| |||||| |||||  |||||||| | |||||||| |||||||||    
T  16691026 ataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 55189618 - 55189528
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    ||||||||| ||| |||||||||| |||||||||||||| |||| |||  | | |||| |||||||||| || ||||| | ||||||||||    
T  55189618 ataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatataattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16691527 - 16691616
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||| |||||| |||||||| ||||| || ||| || ||||| |||||| |||||| ||||||||   || ||||||||||||||||||    
T  16691527 ataattaaaggacaattttgttatgtttaaagagg-caggaccattttcgtgagtaggtcaaaacacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 9e-36; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41681224 - 41681132
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  41681224 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 41681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 11656544 - 11656453
Alignment:
Q  2 taattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11656544 taattgaaggaccgttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13225094 - 13225185
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  13225094 ataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19176380 - 19176288
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  19176380 ataattgaaggaccgttttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19176288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19176745 - 19176837
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  19176745 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34541003 - 34541095
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  34541003 ataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34541095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11656912 - 11657003
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  11656912 ataattgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31133675 - 31133764
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  31133675 ataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 9930116 - 9930203
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  9930116 ttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 33328244 - 33328161
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  33328244 ttgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 9178094 - 9178180
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  9178094 ttgaaggaccgttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 41681589 - 41681679
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||| | |||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  41681589 ataattgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12571953 - 12571861
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||| |||| ||||||||||||||||||||| |  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  12571953 ataattgaatgaccgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 12571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9928999 - 9928912
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||  |||||||||| ||||||||||||||||||    
T  9928999 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12572306 - 12572393
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||    
T  12572306 ataattgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44831337 - 44831246
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||||| || ||||||||||||||||||||||    
T  44831337 ataatggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 33742996 - 33742920
Alignment:
Q  17 tttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  33742996 tttgttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 33742920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13224730 - 13224645
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaatta 87  Q
    ||||||||||||   ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  13224730 ataattgaaggattgttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11336977 - 11337070
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcctac 94  Q
    ||||||||| |||| |||| |||||||||||||||||  ||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  11336977 ataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgtaattaagcctac 11337070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 31133306 - 31133218
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||  ||||||| ||||||||||||||  |||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  31133306 ttgaaggactgttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 31133218  T

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Target: chr8; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33328595 - 33328683
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||| ||||||| ||||||||||| ||||||| |||||||| ||||||| ||||||||| |||||||||| ||||||||    
T  33328595 ataattgaaggaccgttttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

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Target: chr8; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44831700 - 44831792
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||  ||| ||||||||||||||||||| ||| |||||||||||| |||| |||||||||||| |||||||||||| ||||||||||    
T  44831700 ataattgaataaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 44831792  T

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Target: chr8; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8074006 - 8074097
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    ||||||||||||  ||||||||||||||||||||| ||||| || |||||| | ||||||||||||||| |||||||||| ||| |||||||    
T  8074006 ataattgaaggatgattttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaagtataactaagcct 8074097  T

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Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4630241 - 4630328
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| || | |||||||||||||  ||| ||||| |||||| ||||| |||||||||||||| |||||||||||||||    
T  4630241 ataattgaaggaccgttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

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Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4629887 - 4629794
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcctac 94  Q
    ||||||||| |||| ||||||||| ||||||||||||| |||||||||||| | || ||||||||||||  |  ||||||| ||||||||||||    
T  4629887 ataattgaatgaccgttttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagcctac 4629794  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 9177700 - 9177665
Alignment:
Q  58 gccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||||||| |||||||||||||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagccta 9177665  T

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Target: scaffold0417 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11078 - 11168
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11078 ataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11168  T

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Target: scaffold0417; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 10707 - 10643
Alignment:
Q  5 ttgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacga 69  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  10707 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacga 10643  T

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Target: scaffold0176 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19076 - 19166
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||||||||    
T  19076 ataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

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Target: scaffold0176; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18925 - 18834
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||| ||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||  | ||||||||||||||| ||||||    
T  18925 ataattgaagcaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcct 18834  T

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Target: scaffold0273 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4662 - 4755
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcctac 94  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  4662 ataattaaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagcctac 4755  T

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Target: scaffold0273; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4293 - 4243
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgt 51  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  4293 ataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgt 4243  T

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Target: scaffold1223 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 843 - 755
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaag 89  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||    
T  843 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

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Target: scaffold1223; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1196 - 1286
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcc 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||| |||||||||||||||||    
T  1196 ataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

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Target: scaffold0019 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 134129 - 134220
Alignment:
Q  2 taattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    ||||||||||| | ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  134129 taattgaaggatcgttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 134220  T

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Target: scaffold1585 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 657 - 568
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagc 90  Q
    |||||||||||||  |||||||||||||||||||||||||| || |||||| ||||||||||||||||| || |||||||||||||||||    
T  657 ataattgaaggacagttttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

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Target: scaffold0432 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10327 - 10414
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| ||||||||||||||||||||| |  ||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  10327 ataattgaaggaccgttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10022 - 9935
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||||||||||||| | ||||||||||| || ||||||||| | ||||| ||||||||| |||||||| |||||||||    
T  10022 ataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

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Target: scaffold0007 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 64392 - 64301
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagcct 92  Q
    |||||||||||||| |||||||||||||||||||| || || ||||||||| |||| | |||||||||| ||||||||||||||||||||||    
T  64392 ataattgaaggaccgttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 64760 - 64847
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||| ||||||| ||||||||||||||||||||||  |||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  64760 ataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 64847  T

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Target: scaffold0076 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8464 - 8551
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||||||| ||||| | ||||||||||||| | |||||||||||||||||| |||||||| || ||||||||||||||||||    
T  8464 ataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaattaa 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42613 - 42705
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||| ||||||||| |||||||||||||||||||||||  | ||||||| | ||||| ||||||||||| | |||||||| ||||||||||||    
T  42613 ataactgaaggaccgttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagccta 42705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42259 - 42172
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    ||||||||| |||| |||||||||||||||||| |||| || ||||||||| | ||| |||||||||||  || ||||||||||||||    
T  42259 ataattgaatgaccgttttgttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 539 - 454
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaatta 87  Q
    ||||||||||||| ||| |||| |||||||||||  |||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  539 ataattgaaggacgattatgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 61927 - 62000
Alignment:
Q  15 attttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaa 88  Q
    |||||||||| ||||||||||| | ||||| |||||| ||||| ||||||||||| || |||||||||||||||    
T  61927 attttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 61102 - 61026
Alignment:
Q  17 tttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattaagccta 93  Q
    |||||||| |||||||| |||| || || |||||| ||||||||||||||||| || |||||||||| |||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16951 - 17024
Alignment:
Q  1 ataattgaaggaccattttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgacc 74  Q
    ||||||||||||| ||||||||||||||||||| |||  || ||||||||| |||| | |||||||||| ||||    
T  16951 ataattgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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