View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18069_low_6 (Length: 204)
Name: NF18069_low_6
Description: NF18069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18069_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 13766992 - 13767169
Alignment:
| Q |
10 |
ggtacattatactgacttgaaaaagttatttatgtgaatatctttgacatatgttattgatattatatagtttacctagatagtatgaaatatatggatt |
109 |
Q |
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| T |
13766992 |
ggtacattataatgacttgaaaaagttatttatgtgaatatctttgacatatgttattgatattatatagtttacctagatagtatgaaatatatggaat |
13767091 |
T |
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| Q |
110 |
atgttctcaaactctgttcaaatcatgtttcatataaccaccaacttttggcctctttagctgcaaacttcaatgttact |
189 |
Q |
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| T |
13767092 |
atgttctcaaactcagttcaaatcatgtttc--ataaccaccaacttttggcctctttagctgcaaacttcaatgttact |
13767169 |
T |
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