View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18070_low_7 (Length: 258)
Name: NF18070_low_7
Description: NF18070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18070_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 2490247 - 2490486
Alignment:
| Q |
18 |
gttatatcgttaaa-caacaaatattctttgtttatgatttcattacaagtgtggcaagaggtgacatatccatttggtatgacaaatgaatttcttttg |
116 |
Q |
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| T |
2490247 |
gttatatcgttaaagcaacaaatattctttgtttatgatttcattacaagtgtggcaagaggtgacatatccatttggtatgacaaatgaatttctgttg |
2490346 |
T |
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| Q |
117 |
gttgtgtttttaagcgaatttttcatgtgttacaaaacgacactaatctctgtatcaataacatttgttacaatgaggtgtggaatttggatatcatatc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||| |
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| T |
2490347 |
gttgtgtttttaagcgaatttttcatgtgttacaaaacgacactaatctccgtatcaataacatttgttaccacgaggtgtggaatttggatatcatatc |
2490446 |
T |
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| Q |
217 |
aaagatctttctttaagatgttaagatggagatggagact |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
2490447 |
aaagatctttctttaagatgttaagatggagatggagact |
2490486 |
T |
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