View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18071_high_70 (Length: 257)
Name: NF18071_high_70
Description: NF18071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18071_high_70 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 31417948 - 31417712
Alignment:
| Q |
1 |
aaccaagaaacaatataaaaatttcacatatgctttcattacattatatatagatagattagttattccccttnnnnnnnntatagagattagttatata |
100 |
Q |
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| T |
31417948 |
aaccaagaaacaatataaaaatttcacatatgctttcattacattatatatagatagattagttattccccttaaaaaaaa-atagagattagttata-- |
31417852 |
T |
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| Q |
101 |
atatgatgatcattatgcatataggacacgtagtgacattataaacttaattagcaaacagcacatgcttagctcacttatttttgtacatttgtatatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
31417851 |
atatgatgatcattatgcatataggacacgtagtgacattataaacttaattagcaaacagcacatgctgagctcacttatttttgtacatttgtatatg |
31417752 |
T |
|
| Q |
201 |
taaaagggaatcaattannnnnnnattaaagggaatccat |
240 |
Q |
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||||||||||||||||| |||||||||||||||| |
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| T |
31417751 |
taaaagggaatcaattatttttttattaaagggaatccat |
31417712 |
T |
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