View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18071_high_71 (Length: 254)
Name: NF18071_high_71
Description: NF18071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18071_high_71 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 34835032 - 34834809
Alignment:
| Q |
15 |
atcatcatttttaccatgaattatagtaactttacaatttggattttcttttactgtttccaaatatgatccaatttttgaagctgttccacatattatg |
114 |
Q |
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| T |
34835032 |
atcatcatttttaccatgaattatagtaactttacaatttggattttcttttactgtttccaaatatgatccaatttttgaagctgttccacatattatg |
34834933 |
T |
|
| Q |
115 |
ttatgtagtgtatgccacgctgcattatgggtgtgactaaagaatccttcaagcaagaaagtcctgaccctattgaaacaaaatatttaatacgaaactt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34834932 |
ttatgtagtgtatgccacgctgcattatgggtgtgactaaagaatccttcaagcaagaaagtcctgaccctattgaaacaaaatatttaatacgaaactt |
34834833 |
T |
|
| Q |
215 |
cagattagataaaaagtctctatc |
238 |
Q |
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|||||||||||||||||||||||| |
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| T |
34834832 |
cagattagataaaaagtctctatc |
34834809 |
T |
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