View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18071_low_103 (Length: 219)
Name: NF18071_low_103
Description: NF18071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18071_low_103 |
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Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 38935878 - 38936063
Alignment:
| Q |
17 |
agaggatgttaaggtttgggtggaagaaaagatgctggttgtgaaagctgagaaagcacctaagaagaagaatgatgaagatgaagaatggtctaagagc |
116 |
Q |
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| T |
38935878 |
agaggatgttaaggtttgggtggaagaaaagatgctggttgtgaaagctgagaaagcacctaagaagaagaatgatgaagatgaagaatggtctaagagc |
38935977 |
T |
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| Q |
117 |
tatggtaggtatagtagcagaattgctttgccagagaatgtgcagtttgagaatattaaggctgaggttaaggatggtgttcttta |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38935978 |
tatggtaggtatagtagcagaattgctttgccagagaatgtgcagtttgagaatattaaggctgaggttaaggatggtgttcttta |
38936063 |
T |
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