View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18071_low_43 (Length: 366)

Name: NF18071_low_43
Description: NF18071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18071_low_43
NF18071_low_43
[»] chr7 (41 HSPs)
chr7 (10-351)||(37417642-37417983)
chr7 (122-288)||(40196604-40196769)
chr7 (160-288)||(33655180-33655308)
chr7 (151-282)||(41497035-41497166)
chr7 (161-288)||(34235079-34235207)
chr7 (126-288)||(17852881-17853042)
chr7 (145-287)||(24970238-24970380)
chr7 (122-284)||(1051575-1051746)
chr7 (153-269)||(43230273-43230389)
chr7 (161-271)||(13771035-13771145)
chr7 (151-270)||(34228408-34228528)
chr7 (124-288)||(42306342-42306502)
chr7 (293-351)||(37425174-37425232)
chr7 (197-288)||(22163182-22163272)
chr7 (197-288)||(22221890-22221980)
chr7 (151-250)||(39855975-39856074)
chr7 (218-288)||(10315735-10315805)
chr7 (167-269)||(25887243-25887345)
chr7 (223-288)||(18231693-18231758)
chr7 (126-205)||(10315623-10315702)
chr7 (151-276)||(47390890-47391016)
chr7 (124-253)||(48881665-48881795)
chr7 (188-288)||(4833603-4833703)
chr7 (167-269)||(41008233-41008334)
chr7 (152-259)||(31571569-31571678)
chr7 (183-288)||(45940728-45940833)
chr7 (129-271)||(23029429-23029570)
chr7 (119-181)||(17853049-17853111)
chr7 (161-253)||(26365813-26365905)
chr7 (173-269)||(40572325-40572421)
chr7 (151-253)||(19261946-19262047)
chr7 (123-161)||(28074100-28074138)
chr7 (14-68)||(37426501-37426555)
chr7 (161-281)||(38378090-38378205)
chr7 (189-277)||(42087068-42087156)
chr7 (122-161)||(37925837-37925876)
chr7 (124-195)||(48013668-48013739)
chr7 (215-253)||(23116367-23116405)
chr7 (151-188)||(4833566-4833603)
chr7 (200-269)||(13425211-13425280)
chr7 (124-161)||(39856074-39856111)
[»] chr2 (35 HSPs)
chr2 (126-288)||(23748105-23748267)
chr2 (151-288)||(15224766-15224903)
chr2 (126-287)||(36347614-36347785)
chr2 (162-285)||(39732804-39732926)
chr2 (150-288)||(19566892-19567031)
chr2 (123-287)||(12541767-12541937)
chr2 (189-287)||(16565850-16565948)
chr2 (151-288)||(8426951-8427080)
chr2 (161-288)||(28262515-28262642)
chr2 (151-288)||(39821704-39821841)
chr2 (215-288)||(42316836-42316909)
chr2 (167-270)||(37739981-37740085)
chr2 (215-288)||(34209563-34209636)
chr2 (126-253)||(31795876-31796008)
chr2 (201-288)||(17379897-17379984)
chr2 (189-276)||(36566935-36567022)
chr2 (151-269)||(2241445-2241563)
chr2 (128-246)||(7681260-7681378)
chr2 (159-284)||(9631600-9631728)
chr2 (167-268)||(9427036-9427137)
chr2 (187-294)||(12751885-12751993)
chr2 (159-281)||(36046283-36046403)
chr2 (122-181)||(39732735-39732794)
chr2 (162-268)||(29525823-29525931)
chr2 (187-288)||(40022441-40022545)
chr2 (151-243)||(35736210-35736302)
chr2 (126-181)||(1583256-1583311)
chr2 (162-253)||(6721729-6721820)
chr2 (124-159)||(31061357-31061392)
chr2 (126-181)||(42316775-42316829)
chr2 (233-271)||(27926670-27926708)
chr2 (127-181)||(39821848-39821902)
chr2 (124-160)||(17380051-17380087)
chr2 (189-281)||(32503232-32503324)
chr2 (161-285)||(39354249-39354373)
[»] chr5 (42 HSPs)
chr5 (124-288)||(9856888-9857052)
chr5 (151-288)||(13634746-13634883)
chr5 (151-288)||(26414928-26415065)
chr5 (150-287)||(10072720-10072857)
chr5 (124-291)||(20146935-20147116)
chr5 (167-288)||(7544187-7544308)
chr5 (151-294)||(28279542-28279686)
chr5 (162-288)||(4373638-4373764)
chr5 (161-283)||(37551453-37551574)
chr5 (161-287)||(37606940-37607065)
chr5 (161-283)||(37654283-37654404)
chr5 (151-288)||(16938514-16938651)
chr5 (168-288)||(36392222-36392341)
chr5 (126-285)||(8502910-8503073)
chr5 (161-287)||(37779150-37779274)
chr5 (162-287)||(9798685-9798810)
chr5 (122-256)||(40815293-40815436)
chr5 (160-262)||(10476070-10476174)
chr5 (187-287)||(36363103-36363203)
chr5 (163-285)||(16501865-16501988)
chr5 (191-285)||(17024299-17024393)
chr5 (198-288)||(20513517-20513611)
chr5 (173-281)||(42681510-42681618)
chr5 (151-253)||(2550459-2550561)
chr5 (173-263)||(11756934-11757024)
chr5 (121-181)||(22023548-22023608)
chr5 (130-181)||(29002220-29002271)
chr5 (147-188)||(2550383-2550424)
chr5 (124-181)||(10072655-10072712)
chr5 (233-285)||(22023484-22023537)
chr5 (151-231)||(10650464-10650544)
chr5 (167-259)||(14681520-14681612)
chr5 (173-229)||(22022907-22022963)
chr5 (122-161)||(14245084-14245123)
chr5 (151-209)||(1657964-1658022)
chr5 (123-161)||(13634708-13634746)
chr5 (123-161)||(15986833-15986871)
chr5 (246-287)||(10650544-10650585)
chr5 (116-161)||(11436929-11436974)
chr5 (128-161)||(34980812-34980845)
chr5 (128-160)||(8551628-8551660)
chr5 (244-288)||(14245160-14245204)
[»] chr1 (30 HSPs)
chr1 (126-288)||(8529809-8529971)
chr1 (160-288)||(40095005-40095134)
chr1 (151-284)||(32951394-32951527)
chr1 (137-288)||(50744352-50744504)
chr1 (151-286)||(2859006-2859141)
chr1 (151-288)||(51597703-51597840)
chr1 (151-288)||(30010367-30010504)
chr1 (131-284)||(44210981-44211134)
chr1 (152-276)||(10391908-10392032)
chr1 (151-283)||(35349539-35349671)
chr1 (152-288)||(41498440-41498576)
chr1 (151-288)||(38509966-38510103)
chr1 (126-288)||(26940915-26941077)
chr1 (161-287)||(45585758-45585884)
chr1 (160-288)||(49946660-49946788)
chr1 (129-230)||(2470865-2470966)
chr1 (195-288)||(7444574-7444667)
chr1 (119-288)||(12234003-12234182)
chr1 (217-288)||(36285646-36285717)
chr1 (193-288)||(42230615-42230710)
chr1 (167-288)||(6563628-6563748)
chr1 (222-283)||(20576208-20576269)
chr1 (200-264)||(41676363-41676427)
chr1 (243-285)||(43552067-43552109)
chr1 (118-161)||(33643260-33643303)
chr1 (163-238)||(49832594-49832669)
chr1 (125-161)||(26324013-26324049)
chr1 (245-285)||(28770852-28770892)
chr1 (124-160)||(41498402-41498438)
chr1 (152-204)||(41676437-41676489)
[»] chr8 (36 HSPs)
chr8 (151-287)||(11575479-11575615)
chr8 (124-285)||(16652956-16653118)
chr8 (151-287)||(7503027-7503163)
chr8 (124-288)||(37032388-37032551)
chr8 (151-287)||(31543145-31543281)
chr8 (162-281)||(30664407-30664526)
chr8 (151-288)||(1026921-1027057)
chr8 (160-288)||(1281187-1281315)
chr8 (160-285)||(11033461-11033587)
chr8 (160-294)||(41103572-41103706)
chr8 (161-285)||(42650408-42650535)
chr8 (172-288)||(37923150-37923266)
chr8 (173-288)||(6315119-6315234)
chr8 (151-288)||(9718551-9718688)
chr8 (151-288)||(30479789-30479926)
chr8 (145-285)||(11785555-11785695)
chr8 (167-287)||(28083793-28083913)
chr8 (126-269)||(36308852-36308996)
chr8 (167-288)||(40990254-40990377)
chr8 (173-288)||(31738480-31738595)
chr8 (163-264)||(13405023-13405124)
chr8 (121-276)||(33922520-33922680)
chr8 (161-283)||(7979185-7979307)
chr8 (167-288)||(29358412-29358532)
chr8 (161-253)||(3726962-3727054)
chr8 (215-287)||(29690995-29691067)
chr8 (163-253)||(38198156-38198245)
chr8 (130-181)||(1026863-1026914)
chr8 (189-288)||(2248525-2248624)
chr8 (124-181)||(7502962-7503019)
chr8 (197-281)||(4247596-4247680)
chr8 (126-161)||(4247729-4247764)
chr8 (130-181)||(29358354-29358405)
chr8 (121-159)||(12022354-12022392)
chr8 (123-161)||(43732676-43732714)
chr8 (124-181)||(9718487-9718544)
[»] chr3 (44 HSPs)
chr3 (126-288)||(37102221-37102383)
chr3 (151-288)||(41110393-41110530)
chr3 (123-288)||(2387832-2387997)
chr3 (151-288)||(24560252-24560389)
chr3 (122-288)||(21773778-21773954)
chr3 (124-288)||(46556151-46556317)
chr3 (123-287)||(651737-651901)
chr3 (151-288)||(25655042-25655181)
chr3 (165-288)||(37807129-37807252)
chr3 (162-268)||(14898022-14898128)
chr3 (162-285)||(220472-220595)
chr3 (151-288)||(30200160-30200300)
chr3 (151-288)||(9312543-9312683)
chr3 (151-288)||(41040022-41040159)
chr3 (130-281)||(52185029-52185181)
chr3 (190-285)||(16275780-16275875)
chr3 (126-251)||(54574470-54574600)
chr3 (173-266)||(18654694-18654787)
chr3 (191-288)||(36568975-36569072)
chr3 (151-259)||(28582610-28582718)
chr3 (161-263)||(46204931-46205033)
chr3 (187-288)||(27542003-27542104)
chr3 (162-285)||(43005814-43005937)
chr3 (167-286)||(52473966-52474085)
chr3 (130-253)||(46978441-46978564)
chr3 (173-281)||(10748369-10748484)
chr3 (124-181)||(37102157-37102214)
chr3 (168-285)||(55327422-55327539)
chr3 (121-181)||(30200093-30200153)
chr3 (163-253)||(37236970-37237059)
chr3 (152-253)||(40463978-40464079)
chr3 (168-253)||(51819232-51819317)
chr3 (217-269)||(13082953-13083005)
chr3 (119-251)||(42699721-42699853)
chr3 (126-181)||(21773961-21774016)
chr3 (126-253)||(34641002-34641129)
chr3 (119-161)||(24560210-24560252)
chr3 (127-181)||(40858744-40858798)
chr3 (124-181)||(220406-220462)
chr3 (124-160)||(6803411-6803447)
chr3 (121-161)||(24253716-24253756)
chr3 (118-238)||(25179896-25180016)
chr3 (121-169)||(42772223-42772271)
chr3 (127-238)||(49815433-49815543)
[»] chr4 (37 HSPs)
chr4 (151-288)||(31348393-31348530)
chr4 (162-288)||(45741936-45742062)
chr4 (154-288)||(54935106-54935241)
chr4 (167-288)||(26166988-26167109)
chr4 (160-288)||(27735789-27735917)
chr4 (151-276)||(46007785-46007910)
chr4 (124-269)||(1968450-1968605)
chr4 (177-269)||(36151637-36151729)
chr4 (167-288)||(54320485-54320606)
chr4 (119-288)||(29798281-29798457)
chr4 (126-288)||(41174356-41174517)
chr4 (159-284)||(49735544-49735669)
chr4 (151-294)||(47433775-47433918)
chr4 (152-294)||(6891396-6891538)
chr4 (162-288)||(28332850-28332976)
chr4 (162-288)||(44784038-44784163)
chr4 (187-288)||(16400871-16400972)
chr4 (168-269)||(35248738-35248839)
chr4 (160-288)||(45132574-45132695)
chr4 (151-259)||(37711178-37711286)
chr4 (161-294)||(17938173-17938307)
chr4 (173-266)||(5730924-5731017)
chr4 (173-262)||(2917061-2917150)
chr4 (161-281)||(2247882-2248000)
chr4 (216-283)||(34110905-34110972)
chr4 (162-251)||(22921027-22921117)
chr4 (162-251)||(22970682-22970772)
chr4 (126-253)||(4437532-4437658)
chr4 (123-181)||(34110983-34111041)
chr4 (132-181)||(46007715-46007764)
chr4 (126-181)||(56135910-56135965)
chr4 (163-249)||(23813148-23813234)
chr4 (123-161)||(49735465-49735503)
chr4 (163-253)||(55510217-55510307)
chr4 (123-161)||(56135746-56135784)
chr4 (128-181)||(17182495-17182548)
chr4 (124-161)||(54935065-54935102)
[»] scaffold0262 (1 HSPs)
scaffold0262 (126-288)||(16368-16530)
[»] scaffold0067 (1 HSPs)
scaffold0067 (151-288)||(39259-39399)
[»] chr6 (36 HSPs)
chr6 (126-285)||(1300629-1300789)
chr6 (151-288)||(4097584-4097722)
chr6 (151-288)||(33235986-33236122)
chr6 (176-288)||(5585374-5585486)
chr6 (161-287)||(21606917-21607043)
chr6 (151-288)||(31849145-31849282)
chr6 (174-288)||(13583777-13583891)
chr6 (151-285)||(30487380-30487514)
chr6 (160-288)||(9719103-9719230)
chr6 (150-287)||(16738069-16738206)
chr6 (160-288)||(9721210-9721337)
chr6 (151-259)||(19278139-19278246)
chr6 (162-287)||(33041516-33041633)
chr6 (161-238)||(2893675-2893752)
chr6 (173-285)||(10348873-10348986)
chr6 (186-271)||(25741477-25741562)
chr6 (162-288)||(1390365-1390491)
chr6 (189-288)||(34176408-34176507)
chr6 (162-288)||(2892676-2892801)
chr6 (162-232)||(6034200-6034270)
chr6 (294-351)||(8471662-8471720)
chr6 (214-288)||(10818314-10818388)
chr6 (123-181)||(21606851-21606909)
chr6 (152-231)||(12811109-12811188)
chr6 (151-288)||(14515508-14515643)
chr6 (223-288)||(2900017-2900082)
chr6 (160-288)||(2892915-2893046)
chr6 (172-280)||(1395691-1395800)
chr6 (124-161)||(9721136-9721173)
chr6 (124-161)||(23090993-23091030)
chr6 (185-271)||(25747402-25747489)
chr6 (122-161)||(4097231-4097270)
chr6 (122-161)||(14515469-14515508)
chr6 (119-181)||(2900089-2900150)
chr6 (124-161)||(10818227-10818264)
chr6 (128-181)||(33041641-33041694)
[»] scaffold0171 (1 HSPs)
scaffold0171 (161-285)||(15995-16119)
[»] scaffold0096 (1 HSPs)
scaffold0096 (151-288)||(6619-6755)
[»] scaffold0026 (2 HSPs)
scaffold0026 (152-288)||(1208-1344)
scaffold0026 (151-181)||(1351-1381)
[»] scaffold0341 (1 HSPs)
scaffold0341 (167-288)||(18821-18941)
[»] scaffold0294 (1 HSPs)
scaffold0294 (192-280)||(15339-15427)
[»] scaffold0012 (1 HSPs)
scaffold0012 (126-204)||(184611-184689)


Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 10 - 351
Target Start/End: Complemental strand, 37417983 - 37417642
Alignment:
Q  10 aagaaaatatagtcgataattaagcatgcaccattcagttttattatgatcaatctacttcaaaaacatttttcaaaaaattgctaggtttgtgttaagt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37417983 aagaaaatatagtcgataattaagcatgcaccattcagttttattatgatcaatctacttcaaaaacatttttcaaaaaattgctaggtttgtgttaagt 37417884  T
Q  110 atgtttttattttctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaa 209  Q
    ||| |||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37417883 atgattttattttctaagggtgtgtttggattgagggtttaggaggggatggtttacttttcatttttaaataacggactatataacatgtttttcaaaa 37417784  T
Q  210 ttaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtgaccatatataaggcttcaata 309  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37417783 ttaagttaagtgtgattgaagtattatatgatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtgaccatatataaggcttcaata 37417684  T
Q  310 ccactcagtcaggccgcaaatcctgaagcagatttctacttg 351  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  37417683 ccactcagtcaggctgcaaatcctgaagcagatttctacttg 37417642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 40196769 - 40196604
Alignment:
Q  122 tctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtg 221  Q
    ||||||||||| || ||||||| ||||| |||||||| |||||||||||  ||||||||| || || ||||||||||||||||| ||| ||| |||||||    
T  40196769 tctaagggtgtatttggattgagggtttgggagggga-ggtttactttttgtttttaaattacggaatatataacatgtttttctaaaataaattaagtg 40196671  T
Q  222 tgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||||||| |||||| || |||||||| ||  |||||||||||||||| ||||||||| ||||||    
T  40196670 tgattgaagtattatatgattgtttatcaggttgatatgttaactttttataaaacattttatagtg 40196604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 33655308 - 33655180
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    |||||||||||| ||||||||| |  | |||||||||||||||||| ||| ||| ||||||||||||||||| |||||| ||| |||||||||| |||||    
T  33655308 ggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcatttatcatgttaatat 33655209  T
Q  260 gttaactttttagaaaacatttcatagtg 288  Q
    |||||||||||| ||||||||||||||||    
T  33655208 gttaactttttaaaaaacatttcatagtg 33655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 151 - 282
Target Start/End: Complemental strand, 41497166 - 41497035
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| ||||||||| || |||||||||||||||||||| ||| ||| ||||||||||||||||  |||||| ||| |||||||    
T  41497166 ggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcatttatca 41497067  T
Q  251 tgtgaatatgttaactttttagaaaacatttc 282  Q
    ||| |||||||||| |||||| ||||||||||    
T  41497066 tgttaatatgttaaatttttaaaaaacatttc 41497035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 288
Target Start/End: Complemental strand, 34235207 - 34235079
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgttttt-caaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    ||||||||||||||||||||| || || |||||||||||||||| | ||| ||| ||||||||||||||||| |||||| || ||||||||| | |||||    
T  34235207 gtttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatattaatat 34235108  T
Q  260 gttaactttttagaaaacatttcatagtg 288  Q
    |||||||||||| ||||||||||||||||    
T  34235107 gttaactttttataaaacatttcatagtg 34235079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 17852881 - 17853042
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgat 225  Q
    ||||||||||  |||||| |||||||||||||| || ||||||||| ||||||||| || || || |||||||||||||| ||| ||| |||||||||||    
T  17852881 agggtgtgtttagattgagggtttaggaggggagggattacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgat 17852980  T
Q  226 tgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| || |||||| ||||||||||||||   ||| ||| ||||||| ||||| ||||||||||    
T  17852981 tgaggtattatatgatcgtttatcatgttgttattttatcttttta-aaaacttttcatagtg 17853042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 287
Target Start/End: Complemental strand, 24970380 - 24970238
Alignment:
Q  145 ggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgt 244  Q
    |||||||||||| |  ||||  ||||| ||||||||| |  || ||||||||||||||||| ||| ||| ||||||||||||||||| |||||| |||||    
T  24970380 ggtttaggagggaagagtttgtttttcttttttaaattatggattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgt 24970281  T
Q  245 ttatcatgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    |||||| || ||||||||||||||||| |||| ||||||||||    
T  24970280 ttatcaagttaatatgttaactttttaaaaaatatttcatagt 24970238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 122 - 284
Target Start/End: Complemental strand, 1051746 - 1051575
Alignment:
Q  122 tctaagggtgtgttaggattgaaggtttaggaggggaagg----------tttacttttcatttttaaataacagactatataacatgtttttcaaaatt 211  Q
    |||||||||||||| ||||||| |||||||||||||||||          |||| ||||| ||||||||| ||  |||||||||| |||||||| ||| |    
T  1051746 tctaagggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaaaat 1051647  T
Q  212 aatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcat 284  Q
    || ||||||||||||||||  |||||| || ||||||||||| ||||||||||||||||| ||||||||||||    
T  1051646 aaattaagtgtgattgaagcattatatgattgtttatcatgt-aatatgttaactttttaaaaaacatttcat 1051575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 269
Target Start/End: Original strand, 43230273 - 43230389
Alignment:
Q  153 aggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatg 252  Q
    |||||| |||||||||||| ||||||||| || || ||||||||||||||||| ||| ||| ||||||| ||||||||  |||||  |||||||||||||    
T  43230273 aggggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagtgcgattgaagaattatacgatcgtttatcatg 43230372  T
Q  253 tgaatatgttaactttt 269  Q
    | |||||||||||||||    
T  43230373 ttaatatgttaactttt 43230389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 13771145 - 13771035
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| || |||||||||||||||||||  ||| ||| ||||||||||||  ||| |||||| || ||||||||||| ||||||    
T  13771145 gtttacttttcgtttttaaattacggactatataacatgtttttttaaaataaattaagtgtgattcgagtgttatatcattgtttatcatgttaatatg 13771046  T
Q  261 ttaacttttta 271  Q
    |||||||||||    
T  13771045 ttaacttttta 13771035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 270
Target Start/End: Complemental strand, 34228528 - 34228408
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacaga-ctatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    |||||||| | ||||||||||||||| |||| || || |||||||||||||||||| ||| ||| ||||||||||||||||| |||||| || | |||||    
T  34228528 ggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgcttatc 34228429  T
Q  250 atgtgaatatgttaacttttt 270  Q
    || | ||||||||||||||||    
T  34228428 atattaatatgttaacttttt 34228408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 124 - 288
Target Start/End: Original strand, 42306342 - 42306502
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtg 223  Q
    ||||| |||||| ||||||| | |||||||||| | |||||  ||||| ||||||||| || ||||||||||||||| |||| ||| ||| ||||| |||    
T  42306342 taaggttgtgtttggattgaggatttaggagggaagggtttgattttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtg 42306441  T
Q  224 attgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||| ||| ||||||    |||||| | || |||||| |||||||||| ||||||||||||||||    
T  42306442 attggagtattatat----gtttatgaggttaatatgctaactttttaaaaaacatttcatagtg 42306502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 37425232 - 37425174
Alignment:
Q  293 tatataaggcttcaataccactcagtcaggccgcaaatcctgaagcagatttctacttg 351  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37425232 tatataaggcttcaataccactcagtcaggccgcaaatcctcaagcagatttctacttg 37425174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 22163272 - 22163182
Alignment:
Q  197 atgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||| ||| ||| ||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| || ||||||||||||||||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtg 22163182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 22221980 - 22221890
Alignment:
Q  197 atgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||| ||| ||| ||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| || ||||||||||||||||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtg 22221890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 39856074 - 39855975
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| ||||||||| || |||||||||||||||||||| ||| ||| |||||||||| | |||| |||||| ||| |||||||    
T  39856074 ggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgacttaagtattatatgatcatttatca 39855975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 10315735 - 10315805
Alignment:
Q  218 agtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| ||||||||||||||||    
T  10315735 agtgtgattgaagtattatataatcgtttatcttgttaatatgttaaatttttaaaaaacatttcatagtg 10315805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 25887243 - 25887345
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||| ||||| || |||||||||||||||||||| ||| ||| ||||||||||||| ||| |||||| || ||||||||| | ||||||||||||    
T  25887243 ttttcttttataaatcacggactatataacatgtttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatattaatatgttaact 25887342  T
Q  267 ttt 269  Q
    |||    
T  25887343 ttt 25887345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 18231693 - 18231758
Alignment:
Q  223 gattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  18231693 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtg 18231758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 10315623 - 10315702
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttc 205  Q
    |||||||||| ||||||||| |||||||||||| | |||||||||| |||||||||  ||||||||||||||| ||||||    
T  10315623 agggtgtgtttggattgaagatttaggaggggaggatttacttttcttttttaaatttcagactatataacatatttttc 10315702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 151 - 276
Target Start/End: Original strand, 47390890 - 47391016
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatat-aatcgtttatc 249  Q
    |||| ||| |||||||||||| ||||||||| |   ||||||||||||||||||| ||| ||  |||| |||||||||||| |||||| | | |||||||    
T  47390890 ggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgtgattgaagtattatatgacttgtttatc 47390989  T
Q  250 atgtgaatatgttaactttttagaaaa 276  Q
    |||| ||||||||||| ||||| ||||    
T  47390990 atgttaatatgttaacattttaaaaaa 47391016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 124 - 253
Target Start/End: Complemental strand, 48881795 - 48881665
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatg-tttttcaaaattaatttaagtgt 222  Q
    |||||||||||| ||||||| ||||||||||||||||||| |||||| |||||||||| ||| || |  ||| ||| ||||| |||| ||| |||||| |    
T  48881795 taagggtgtgtttggattgagggtttaggaggggaaggttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaaataaattaagtat 48881696  T
Q  223 gattgaagttttatataatcgtttatcatgt 253  Q
      ||||||  |||||||||| ||||||||||    
T  48881695 ttttgaagcattatataatcatttatcatgt 48881665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 288
Target Start/End: Complemental strand, 4833703 - 4833603
Alignment:
Q  188 ctatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    |||||||||||||  ||  ||| ||| |||| ||||||| |||| |||||| || ||||||||||| |||| |||||||||||| |||||||||||||||    
T  4833703 ctatataacatgtaattttaaaataaattaaatgtgatttaagtattatatgattgtttatcatgttaataggttaactttttataaaacatttcatagt 4833604  T
Q  288 g 288  Q
    |    
T  4833603 g 4833603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 41008233 - 41008334
Alignment:
Q  167 ttttcatttttaaataacagactatataacatg-tttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaac 265  Q
    ||||| ||||||||| || |||||||||||||| |||||  ||| ||| ||||||||||||||||  |||||| || ||||||||||| |||||||||||    
T  41008233 ttttcttttttaaattacggactatataacatgttttttttaaaataaattaagtgtgattgaag--ttatatgattgtttatcatgttaatatgttaac 41008330  T
Q  266 tttt 269  Q
    ||||    
T  41008331 tttt 41008334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 259
Target Start/End: Complemental strand, 31571678 - 31571569
Alignment:
Q  152 gaggggaaggtttacttttcatttttaaataacagactatataacatg--tttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    |||||||  ||||||||||| ||||||||| || ||| ||||||||||  ||||| ||||  |  ||||||||||||||||| ||||||||| |||||||    
T  31571678 gaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaaaaatattaagtgtgattgaagtattatataattgtttatc 31571579  T
Q  250 atgtgaatat 259  Q
    |||| |||||    
T  31571578 atgttaatat 31571569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 288
Target Start/End: Complemental strand, 45940833 - 45940728
Alignment:
Q  183 acagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttc 282  Q
    |||||||||||||||| |||||| ||| ||| |||| ||| |||||||| |||||| |||| |||| |||| |||||  || |||| || ||||||||||    
T  45940833 acagactatataacatatttttctaaaataaattaaatgtaattgaagtattatattatcgcttattatgttaatatactatctttgtaaaaaacatttc 45940734  T
Q  283 atagtg 288  Q
    ||||||    
T  45940733 atagtg 45940728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 271
Target Start/End: Complemental strand, 23029570 - 23029429
Alignment:
Q  129 gtgtgttaggattgaaggtttaggaggggaag-----gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtg 223  Q
    |||||||  |||||||||||||||||| ||||     ||||||||||| ||||||||| | ||||||||||||||||||||| ||| |||   | ||       
T  23029570 gtgtgtttcgattgaaggtttaggaggtgaagagagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataa---aggt--- 23029477  T
Q  224 attgaagttttatataatcgtttatcatgtgaatatgttaacttttta 271  Q
    |||||| | ||||||||  ||||||||||| ||||||||||| |||||    
T  23029476 attgaaatattatataactgtttatcatgttaatatgttaacatttta 23029429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 17853111 - 17853049
Alignment:
Q  119 ttttctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||| |||||||||||| |||| || |||||||||||||| || |||||||||||||||||||    
T  17853111 ttttgtaagggtgtgtttggatggagggtttaggaggggagggcttacttttcatttttaaat 17853049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 26365813 - 26365905
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgt 253  Q
    ||||||||||| |||||| || ||| |||||||||||| |||||| ||| |||  || ||||||||||||| |||||| || |||| ||||||    
T  26365813 gtttacttttcttttttatattacaaactatataacatatttttctaaaataaactaggtgtgattgaagtattatatgattgtttctcatgt 26365905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 40572421 - 40572325
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttt 269  Q
    |||| |||| || |||||||||| |||||| || ||| ||| ||||| |||||| |||| |||||| | | |||||||||| |||||||||||||||    
T  40572421 ttttaaaattacggactatataatatgtttctctaaaataaattaagcgtgattaaagtattatatgaccttttatcatgttaatatgttaactttt 40572325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 253
Target Start/End: Complemental strand, 19262047 - 19261946
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| || |||||||||| |||||||| ||||||| | ||| |||||||  ||||| |||| || ||||||||||||  ||||| ||| |||||||    
T  19262047 ggaggggagggcttacttttcaattttaaattacagactctttaaaatgttttgaaaaataaatt-aattgtgattgaagtactatatgatcatttatca 19261949  T
Q  251 tgt 253  Q
    |||    
T  19261948 tgt 19261946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 28074100 - 28074138
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  28074100 ctaagggtgtgtttggattgaaggtttaggaggggaagg 28074138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 37426555 - 37426501
Alignment:
Q  14 aaatatagtcgataattaagcatgcaccattcagttttattatgatcaatctact 68  Q
    |||||| ||| |||||||| || |||||||||||||||||||| |||||||||||    
T  37426555 aaatattgtcaataattaaacaggcaccattcagttttattataatcaatctact 37426501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 38378090 - 38378205
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    |||| |||||| ||||||||  ||  |||||||||||||||||| |||| ||| | || ||| ||||| || |||||| ||||||||| ||||     ||    
T  38378090 gttttcttttcttttttaaactacgaactatataacatgttttttaaaaataaatcaattgtaattgaggtattatatgatcgtttattatgt-----tg 38378184  T
Q  261 ttaactttttagaaaacattt 281  Q
    ||||||||||| |||||||||    
T  38378185 ttaactttttaaaaaacattt 38378205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 277
Target Start/End: Original strand, 42087068 - 42087156
Alignment:
Q  189 tatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaac 277  Q
    |||||||||| || ||  ||| ||| |||||||| |||||| | |||||||||||||| ||| || |||||| |||||||||| |||||    
T  42087068 tatataacatattattttaaaataaattaagtgtaattgaattattatataatcgtttgtcacgttaatatgctaactttttaaaaaac 42087156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 37925837 - 37925876
Alignment:
Q  122 tctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  37925837 tctaagggtgtgtttggattgagggtttaggaggggaagg 37925876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 48013739 - 48013668
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataa 195  Q
    |||||||||||| |||| || || |||||||||||  | ||||||||| ||||||||| ||||||| |||||    
T  48013739 taagggtgtgtttggatggagggattaggaggggagagcttacttttcgtttttaaatcacagactttataa 48013668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 23116405 - 23116367
Alignment:
Q  215 ttaagtgtgattgaagttttatataatcgtttatcatgt 253  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  23116405 ttaagtgtgattgaagtattatataatcatttatcatgt 23116367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 4833566 - 4833603
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagac 188  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  4833566 ggaggggagggtttacttttcatttttaaattacagac 4833603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 13425280 - 13425211
Alignment:
Q  200 tttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttt 269  Q
    ||||| |||| ||| |||||||||| |||||| | |||| || ||||||||||| |||||||| ||||||    
T  13425280 tttttaaaaaataaattaagtgtgaatgaagtataatatgattgtttatcatgttaatatgttgactttt 13425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 39856111 - 39856074
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  39856111 taagggtgtgtttggattgagggtttaggaggggaagg 39856074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 23748105 - 23748267
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgat 225  Q
    |||||||||| |||| || |||||||||||||| |||||| ||||| ||||||||  || |||||||||||||||||||||||| ||| | |||||||||    
T  23748105 agggtgtgtttggatcgagggtttaggaggggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgtgat 23748204  T
Q  226 tgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||| |||||| |||||||||||||| ||||||||||||||||| || |||||||||||||    
T  23748205 tgaagtattatattatcgtttatcatgttaatatgttaactttttaaaagacatttcatagtg 23748267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 15224903 - 15224766
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| ||||||||| || | |||||||||||||||||| | | ||| ||||||||||||||||| |||||| ||| |||||||    
T  15224903 ggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaattaagtgtgattgaagtattatatgatcatttatca 15224804  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||||||| ||||||| ||||||||||||||||    
T  15224803 tgttaatatgttagctttttaaaaaacatttcatagtg 15224766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 287
Target Start/End: Complemental strand, 36347785 - 36347614
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaagg----------tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatt 215  Q
    |||||||||| ||||||| |||||||||||||||||          |||||||||| ||||||||| || |||||||||||||||||||| ||| ||| |    
T  36347785 agggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaat 36347686  T
Q  216 taagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||| |||| || |||||||    
T  36347685 taagtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagt 36347614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 39732926 - 39732804
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||||||||| ||||||||| || ||||||||| |||||||||| ||| ||| |||||| |||||||||| |||||| |||||||||||||| |||||||    
T  39732926 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 39732828  T
Q  262 taactttttagaaaacatttcata 285  Q
    |||||||||| |||||||||||||    
T  39732827 taactttttataaaacatttcata 39732804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 150 - 288
Target Start/End: Complemental strand, 19567031 - 19566892
Alignment:
Q  150 aggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    ||||||||| |||||| |||   ||||||||| || |||||||||||||||||||| ||| ||| ||||||||||||||||| |||||  | ||||||||    
T  19567031 aggaggggagggtttaatttcattttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgaccgtttatc 19566932  T
Q  250 atgtgaatatgttaacttttt-agaaaacatttcatagtg 288  Q
    || | |||||| ||||||||| | ||||||||||||||||    
T  19566931 attttaatatgctaactttttaaaaaaacatttcatagtg 19566892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 123 - 287
Target Start/End: Original strand, 12541767 - 12541937
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaagg-----tttacttttcatttttaaataacagactatataacatgttttt-caaaattaattt 216  Q
    ||||| ||||||| ||||||| |||||||||||||| ||     | |||||||| ||||||||| || |||||||||| || ||||| | ||| ||| ||    
T  12541767 ctaagagtgtgtttggattgagggtttaggaggggaggggagagtctacttttcttttttaaattacggactatataaaatattttttctaaaataaatt 12541866  T
Q  217 aagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    ||||| |||||||||  ||||| |||||||||||||| ||| ||||||||||||| ||||||||| |||||    
T  12541867 aagtgcgattgaagtactatatgatcgtttatcatgttaatgtgttaactttttaaaaaacattttatagt 12541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 189 - 287
Target Start/End: Original strand, 16565850 - 16565948
Alignment:
Q  189 tatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||| |||||| |||||||||||| |  |||||||||||||||| ||||| |||||||||    
T  16565850 tatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaactttttaaaaaacgtttcatagt 16565948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 8427080 - 8426951
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    ||||||||  ||||||||||||||||||||  |||||| |||||||||||||||| ||| ||| ||||||| ||||||||| |||||| ||| ||||||     
T  8427080 ggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaagtgcgattgaagtattatatgatcatttatc- 8426982  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
           |||||||||||||| ||||||||||||||||    
T  8426981 -------atgttaactttttaaaaaacatttcatagtg 8426951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 288
Target Start/End: Complemental strand, 28262642 - 28262515
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||| ||| ||| |||  |||||||||| | ||| || |||||||||||||| | |||     
T  28262642 gtttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattata 28262543  T
Q  261 ttaactttttagaaaacatttcatagtg 288  Q
    ||||||||||| |||| |||||||||||    
T  28262542 ttaactttttaaaaaatatttcatagtg 28262515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 39821704 - 39821841
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||||||||||||| |  || | ||||||||||||||| ||| ||| ||||||| |||| |||| |||||  ||| |||||||    
T  39821704 ggaggggagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtattataagatcatttatca 39821803  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| |||||||||||| |||| | |  |||||||||||    
T  39821804 tgttaatatgttaactctttaaatattatttcatagtg 39821841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 42316909 - 42316836
Alignment:
Q  215 ttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||||||||||| |||||| |||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  42316909 ttaagtgtgattgaagtattatatgatcgtttatcatgttaatacgttaactttttaaaaaacatttcatagtg 42316836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 37740085 - 37739981
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgttttt-caaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaac 265  Q
    ||||| |||||||||  |||| |||||||||||||||| | ||| ||| ||||||||||||||||| |||||| |||||||||||||| ||||| |||||    
T  37740085 ttttcttttttaaattccagattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaac 37739986  T
Q  266 ttttt 270  Q
    |||||    
T  37739985 ttttt 37739981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 34209563 - 34209636
Alignment:
Q  215 ttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||| |||| |||||||||||    
T  34209563 ttaagtgtgattgaagtgttatatgattgtttatcatgttaatatgttaactttttaaaaaatatttcatagtg 34209636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 31796008 - 31795876
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggt-----ttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagt 220  Q
    ||||| |||| |||||||||||||||||||||||||      ||| ||||| ||| ||||| || || || |||||||||||||  ||| ||| ||||||    
T  31796008 agggtttgtttggattgaaggtttaggaggggaagggagggattaattttcttttctaaatcacggagtaaataacatgtttttttaaaataaattaagt 31795909  T
Q  221 gtgattgaagttttatataatcgtttatcatgt 253  Q
    ||||||||||| |||||| ||||||||||||||    
T  31795908 gtgattgaagtattatatgatcgtttatcatgt 31795876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 17379897 - 17379984
Alignment:
Q  201 ttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||| ||| ||| ||||||||||||| ||| |||||| || ||||||||||| |||||| |||||||||| ||||||||||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtg 17379984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 36567022 - 36566935
Alignment:
Q  189 tatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaa 276  Q
    ||||||||||||||||| | | ||| |||| |||||||||||| |||||| ||| |||||||||| ||||||||||||||||| ||||    
T  36567022 tatataacatgtttttctataataaattaattgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaa 36566935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 269
Target Start/End: Original strand, 2241445 - 2241563
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    ||||||||  ||||||||||   || ||||| || |||||||||| | ||||||| ||| ||| |||||||| |||||||| |||||| || ||||||||    
T  2241445 ggaggggagagtttacttttttattataaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattatatgattgtttatca 2241544  T
Q  251 tgtgaatatgttaactttt 269  Q
    ||| |||||||||| ||||    
T  2241545 tgttaatatgttaaatttt 2241563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 246
Target Start/End: Original strand, 7681260 - 7681378
Alignment:
Q  128 ggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattg 227  Q
    |||||||| ||||| | ||||||||||||||| ||||  ||||||||||| ||| || || ||||||| |  |||||  ||| ||| |||||||||||||    
T  7681260 ggtgtgtttggatttagggtttaggaggggaatgtttgtttttcattttttaattacggattatataatagttttttgtaaaataaattaagtgtgattg 7681359  T
Q  228 aagttttatataatcgttt 246  Q
    |||| |||||| |||||||    
T  7681360 aagtattatatgatcgttt 7681378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 9631600 - 9631728
Alignment:
Q  159 aggtttacttttcatttttaaataacagactatataacatgtttttcaa---aattaatttaagtgtgattgaagttttatataatcgtttatcatgtga 255  Q
    ||||||||||||| ||||||||  |  |||||||||||||||||||      || ||| | |||||||| |||||| |||||| |||||||||||||| |    
T  9631600 aggtttacttttcttttttaaactatcgactatataacatgtttttttttttaaataaatcaagtgtgaatgaagtattatattatcgtttatcatgtta 9631699  T
Q  256 atatgttaactttttagaaaacatttcat 284  Q
    |||||||||||||||| |  |||||||||    
T  9631700 atatgttaactttttaaaggacatttcat 9631728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 9427036 - 9427137
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||||||||| ||  ||||||||||||||||||||||| ||| ||| | ||||||||||| ||||||  | ||||||||||  |||||| |||||    
T  9427036 ttttcttttttaaattaccaactatataacatgtttttcaaaactaaattatgcgtgattgaagtattatatgtttgtttatcatgctaatatgctaact 9427135  T
Q  267 tt 268  Q
    ||    
T  9427136 tt 9427137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 12751885 - 12751993
Alignment:
Q  187 actatataacatgttttt-caaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcata 285  Q
    |||||||||||| ||||| | ||| ||||||||||||||||||||| |||||| ||||||||| || | | ||| |||| |||| | |||| ||||||||    
T  12751885 actatataacatattttttctaaaataatttaagtgtgattgaagtattatatgatcgtttattatattattatattaatttttaaaaaaatatttcata 12751984  T
Q  286 gtgaccata 294  Q
    ||| |||||    
T  12751985 gtgtccata 12751993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 36046403 - 36046283
Alignment:
Q  159 aggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaata 258  Q
    ||||||||||||  ||||||||| || ||| |||||||||| ||||  ||| ||| || ||||  |||||||| |||| | ||| |||| ||||| ||||    
T  36046403 aggtttacttttgttttttaaattacggacgatataacatgcttttataaaataaattgagtg--attgaagtattatgtgatcatttaacatgttaata 36046306  T
Q  259 tgttaactttttagaaaacattt 281  Q
    ||||||||||||| |||||||||    
T  36046305 tgttaactttttaaaaaacattt 36046283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 39732735 - 39732794
Alignment:
Q  122 tctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||| |||||||  ||| ||||||||||||||||| ||||||||||||||||||||||    
T  39732735 tctaagagtgtgtttagatggaaggtttaggaggggagggtttacttttcatttttaaat 39732794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 29525931 - 29525823
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataat--cgtttatcatgtgaatat 259  Q
    |||| ||||| ||||||||| || || ||||||| ||||||||  ||| ||| |||| |||||||||||| |||||||||    |||||||||| |||||    
T  29525931 tttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattatataatactttttatcatgttaatat 29525832  T
Q  260 gttaacttt 268  Q
    |||||||||    
T  29525831 gttaacttt 29525823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 40022441 - 40022545
Alignment:
Q  187 actatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgt--gaatatgttaacttttt-agaaaacatttca 283  Q
    ||||||||||||||||||  ||| ||| ||||||||||||||||| |||||| || ||||| ||| |   |||||||| ||||||| | |||||||||||    
T  40022441 actatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttaaaaaaacatttca 40022540  T
Q  284 tagtg 288  Q
    |||||    
T  40022541 tagtg 40022545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 35736210 - 35736302
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcg 243  Q
    |||||||| || ||| ||||| ||||||||| || ||||| |||||||||||||| ||| ||| | |||||||| |||||| |||||| ||||    
T  35736210 ggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaataaatgaagtgtgactgaagtattatatgatcg 35736302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 1583311 - 1583256
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    ||||| |||| |||| || |||||||||||||| |||| |||||||||||||||||    
T  1583311 agggtttgtttggatggagggtttaggaggggagggttcacttttcatttttaaat 1583256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 6721820 - 6721729
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgt 253  Q
    |||| ||||| ||||||||  || || |||||| |||||||||| ||| ||| | ||||||||||||| | |||||| ||| ||||||||||    
T  6721820 tttagttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattgaaatattatattatcatttatcatgt 6721729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 159
Target Start/End: Original strand, 31061357 - 31061392
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaa 159  Q
    |||||||||||| |||||||||||||||||||||||    
T  31061357 taagggtgtgtttggattgaaggtttaggaggggaa 31061392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 42316775 - 42316829
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||||| |||| |||||||||| ||||| || ||||||||||||||||||||    
T  42316775 agggtgtgtttggatggaaggtttagaagggggag-tttacttttcatttttaaat 42316829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 271
Target Start/End: Original strand, 27926670 - 27926708
Alignment:
Q  233 ttatataatcgtttatcatgtgaatatgttaacttttta 271  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  27926670 ttatatgatcgtttatcatgttaatatgttaacttttta 27926708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 39821902 - 39821848
Alignment:
Q  127 gggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    ||||||||| |||| || |||||||||||||| |||||| ||||| |||||||||    
T  39821902 gggtgtgtttggatggagggtttaggaggggagggtttagttttcttttttaaat 39821848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 17380087 - 17380051
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaag 160  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  17380087 taagggtgtgtttggattgagggtttaggaggggaag 17380051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 32503232 - 32503324
Alignment:
Q  189 tatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacattt 281  Q
    |||||||||| |||||| ||| ||| |||||| ||||| || | |||||| ||  |||||||| |  |||| ||||||||||| |||||||||    
T  32503232 tatataacatatttttctaaaataaattaagtatgattaaaatattatatgattatttatcatctttatatattaactttttacaaaacattt 32503324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 285
Target Start/End: Complemental strand, 39354373 - 39354249
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||  ||||||||| |||   |||||||||||||| || ||| |||  | |||||||||||||| ||| || |||| |||| |||| | |||     
T  39354373 gtttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtattacatgatcgattattatgttattatt 39354274  T
Q  261 ttaactttttagaaaacatttcata 285  Q
    |||| |||||  |||| ||||||||    
T  39354273 ttaatttttttaaaaatatttcata 39354249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 288
Target Start/End: Original strand, 9856888 - 9857052
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtg 223  Q
    |||||||||||| ||||||| ||||||||||||||  ||||| ||||| ||||||||| |  |||||||||||||||||||| ||| ||| | |||||||    
T  9856888 taagggtgtgtttggattgagggtttaggaggggagagtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgtg 9856987  T
Q  224 attgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||||| |||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  9856988 attgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaaacatttcatagtg 9857052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 13634746 - 13634883
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||||||||||| ||| ||| ||| ||||||||||| | |||||| |||||||||||    
T  13634746 ggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattatgtgtgattgaattattatatgatcgtttatca 13634845  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||||||||||||||| ||||||||||||||||    
T  13634846 tgttaatatgttaactttttaaaaaacatttcatagtg 13634883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 26414928 - 26415065
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| ||||||||| || |||||||| ||||||||||| ||| ||  ||||||||||||||||| ||||||  ||||||||||    
T  26414928 ggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattatatggtcgtttatca 26415027  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||||||||||||||| ||||||||||||||||    
T  26415028 tgttaatatgttaactttttataaaacatttcatagtg 26415065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 150 - 287
Target Start/End: Complemental strand, 10072857 - 10072720
Alignment:
Q  150 aggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    |||||| |||| |||||||||| ||||||||| || |||  ||||||||||||||| ||| ||| |||||| |||||||||| |||||| ||||||||||    
T  10072857 aggaggagaagatttacttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatc 10072758  T
Q  250 atgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    |||| ||||||||||||||||| |||| ||||||||||    
T  10072757 atgttaatatgttaactttttaaaaaatatttcatagt 10072720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 20147116 - 20146935
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaagg-----tttacttttcatttttaaataacagactatataacatgtttttc-aaaattaatt-- 215  Q
    |||||||||||| ||||||| |||||||||||||||||     |||||||||||||||||||| || || |||||| |||||||||| ||||| ||||      
T  20147116 taagggtgtgtttggattgagggtttaggaggggaagggagggtttacttttcatttttaaattacggattatata-catgtttttctaaaataaattaa 20147018  T
Q  216 -------taagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtgacc 291  Q
           |||||||||||||| | |||||| |||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  20147017 gtgtaattaagtgtgattgaaatattatatgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgacc 20146935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 167 - 288
Target Start/End: Original strand, 7544187 - 7544308
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||||||||| || |||||||||||||||||||| ||| ||| | ||||||||||||||| |||||| || |||||| |||| |||||| |||||    
T  7544187 ttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgattgtttattatgttaatatgctaact 7544286  T
Q  267 ttttagaaaacatttcatagtg 288  Q
    ||||| ||||||||||||||||    
T  7544287 ttttaaaaaacatttcatagtg 7544308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 28279686 - 28279542
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgttttt-caaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    ||||| || |||||||||||| ||||||||| |  || |||||||||||||||| | ||| |||  |||||||||||||||| |||||| ||| ||||||    
T  28279686 ggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaactaagtgtgattgaagtattatatgatcatttatc 28279587  T
Q  250 atgtgaatatgttaactttttagaaaacatttcatagtgaccata 294  Q
    |||| ||||||||||||||||| ||||||||||||| || |||||    
T  28279586 atgttaatatgttaactttttaaaaaacatttcataatgtccata 28279542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 4373764 - 4373638
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||||||||| ||||||||| || |||||||||||| |||||| |||| ||| ||||||||||||||| | |||||| ||| |||||||||| |||||||    
T  4373764 tttacttttcttttttaaattacggactatataacaagttttttaaaaataaattaagtgtgattgaaatattatatgatcatttatcatgttaatatgt 4373665  T
Q  262 taactttttagaaaacatttcatagtg 288  Q
    |||||||| | |||| |||||| ||||    
T  4373664 taacttttaaaaaaatatttcacagtg 4373638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 37551453 - 37551574
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| |  |||||||||| | |||||| |||| ||| ||| ||||||||||||| |||||| |||||||||||||| ||||||    
T  37551453 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37551551  T
Q  261 ttaactttttagaaaacatttca 283  Q
    ||||||||||| |||||||||||    
T  37551552 ttaactttttataaaacatttca 37551574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 37606940 - 37607065
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| |  |||||||||| ||||||||  ||| ||| |||  |||||||||||| |||||| |||||||||||||| ||||||    
T  37606940 gtttacttttcgtttttaaattaaggactatataa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatg 37607038  T
Q  261 ttaactttttagaaaacatttcatagt 287  Q
    ||||||||||| |||||||||||||||    
T  37607039 ttaactttttataaaacatttcatagt 37607065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 37654283 - 37654404
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| |  |||||||||| | |||||| |||| ||| ||| ||||||||||||| |||||| |||||||||||||| ||||||    
T  37654283 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37654381  T
Q  261 ttaactttttagaaaacatttca 283  Q
    ||||||||||| |||||||||||    
T  37654382 ttaactttttataaaacatttca 37654404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 16938514 - 16938651
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||  ||||| ||||||| | || ||||||||||||||||| || ||| ||| ||||||||||||||| | |||||| ||| |||||||    
T  16938514 ggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataaattaagtgtgattgaaatattatatgatcatttatca 16938613  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| || ||||||||| |||| ||||||||||||||||    
T  16938614 tgttaacatgttaactctttaaaaaacatttcatagtg 16938651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 288
Target Start/End: Complemental strand, 36392341 - 36392222
Alignment:
Q  168 tttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactt 267  Q
    |||| ||||||||| || |||||||||| || ||||  |||||  ||| ||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  36392341 tttcgtttttaaattacggactatataatatattttctaaaatagatt-aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactt 36392243  T
Q  268 tttagaaaacatttcatagtg 288  Q
    |||| ||||||||||||||||    
T  36392242 tttataaaacatttcatagtg 36392222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 285
Target Start/End: Complemental strand, 8503073 - 8502910
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttactt-ttcattttt---aaataacagactatataacatgtttttcaaaattaatttaagtg 221  Q
    |||||||||| ||||||| |||||| ||| |||||||||| || || ||||||   |||| || |||||||||||||| ||||| ||| ||| |||||||    
T  8503073 agggtgtgtttggattgagggtttatgagaggaaggtttatttatttattttttaaaaattacggactatataacatgcttttctaaaataaattaagtg 8502974  T
Q  222 tgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcata 285  Q
    |||||||||| |||| |||| || |||||| | ||| ||||||||||||| |||| ||||||||    
T  8502973 tgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaatatttcata 8502910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 37779150 - 37779274
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| |  |||||| ||| ||||||||  ||| ||| |||  |||||||||||| |||||| |||||||||||||| ||||||    
T  37779150 gtttacttttcgtttttaaattaaggactat-taa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatg 37779247  T
Q  261 ttaactttttagaaaacatttcatagt 287  Q
    ||||||||||| |||||||||||||||    
T  37779248 ttaactttttataaaacatttcatagt 37779274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 287
Target Start/End: Complemental strand, 9798810 - 9798685
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||||||||| |||| |||| ||||| |||||||||||||||||  || ||| |||| |||||||||||| |||||| ||||||| |||||| || || |    
T  9798810 tttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaattgtgattgaagtattatatgatcgtttttcatgttaaaatat 9798711  T
Q  262 taactttttagaaaacatttcatagt 287  Q
    | |||||||| |||||||||| ||||    
T  9798710 tgactttttaaaaaacatttcgtagt 9798685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 40815293 - 40815436
Alignment:
Q  122 tctaagggtgtgttaggattgaaggtttaggaggggaagg----------tttacttttcatttttaaataacagactatataacatgtttttcaaaatt 211  Q
    |||||||||||||| ||||||||| |||||||||||||||          |||||||||| ||||||||| ||||||||||||||||||||||  ||| |    
T  40815293 tctaagggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattacagactatataacatgtttttataaaat 40815392  T
Q  212 aatttaagtgtgattgaagttttatataatcgtttatcatgtgaa 256  Q
    ||   ||||||||||||| | ||||||||| ||||||||||||||    
T  40815393 aa-aaaagtgtgattgaaatattatataattgtttatcatgtgaa 40815436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 10476070 - 10476174
Alignment:
Q  160 ggtttacttttcatttttaaa-taacagactatata-acatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaat 257  Q
    |||||||||||| |||||||| | ||||| |||||| ||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||| | |||    
T  10476070 ggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaataaattaagtgtgattgaagtattatataatcgtttatcatcttaat 10476169  T
Q  258 atgtt 262  Q
    |||||    
T  10476170 atgtt 10476174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 36363103 - 36363203
Alignment:
Q  187 actatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatag 286  Q
    ||||||||||||||||||| ||| ||| | |||||| ||||||||||||||| || ||||||||||  |||||||||||||| || || |||||| ||||    
T  36363103 actatataacatgtttttctaaaataaatcaagtgtcattgaagttttatatcattgtttatcatgctaatatgttaactttctaaaagacattttatag 36363202  T
Q  287 t 287  Q
    |    
T  36363203 t 36363203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 285
Target Start/End: Complemental strand, 16501988 - 16501865
Alignment:
Q  163 ttacttttcatttttaaataacagactatataacatgttttt-caaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    ||||||||  ||||||||| || ||||||||| ||| ||||| | ||| ||| | |||||||||| ||||||||||| ||| ||||| |||| |||||||    
T  16501988 ttacttttattttttaaattacggactatatatcatattttttctaaaataaatcaagtgtgattaaagttttatatgatcatttattatgttaatatgt 16501889  T
Q  262 taactttttagaaaacatttcata 285  Q
    |||||||| | |||||||||||||    
T  16501888 taacttttaaaaaaacatttcata 16501865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 191 - 285
Target Start/End: Complemental strand, 17024393 - 17024299
Alignment:
Q  191 tataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcata 285  Q
    ||||||||||||||| ||| ||| ||||||  ||||||||| |||||| ||||||| |||||| |||||| |||||||||| | |||||||||||    
T  17024393 tataacatgtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcata 17024299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 20513611 - 20513517
Alignment:
Q  198 tgtttttcaaaattaatttaagtgtgattgaagttttatata----atcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||||  ||| ||| ||||||||||||||||| |||||||    |||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  20513611 tgtttttataaaataaattaagtgtgattgaagtattatatatatgatcgtttatcatgataatatgttaactttttaaaaaacatttcatagtg 20513517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 281
Target Start/End: Original strand, 42681510 - 42681618
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttag 272  Q
    ||||| ||| || |||||||||||||||||||| ||| |||||| ||||||||| |||| |||||| ||| |||||||||| | ||| |||| ||||||     
T  42681510 ttttttaattacggactatataacatgtttttctaaaataattttagtgtgattaaagtattatatgatcatttatcatgttattattttaattttttaa 42681609  T
Q  273 aaaacattt 281  Q
    |||| ||||    
T  42681610 aaaatattt 42681618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 253
Target Start/End: Complemental strand, 2550561 - 2550459
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| |||||||    | |||||||||||||||||||| | | ||| ||| ||||||||||||| |||||| || ||||||||    
T  2550561 ggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacgtgtgattgaagtattatatgattgtttatca 2550462  T
Q  251 tgt 253  Q
    |||    
T  2550461 tgt 2550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 11756934 - 11757024
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgtta 263  Q
    ||||||||| ||  |||||||||||||||| || ||| ||| |||||||||||| |||| |||||| ||| ||||| |||| |||||||||    
T  11756934 tttttaaattacgaactatataacatgtttctctaaaataaattaagtgtgattaaagtattatatgatcatttatgatgttaatatgtta 11757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 22023608 - 22023548
Alignment:
Q  121 ttctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||| |||||||||| |||| || |||||||||||||| |||||||||||||||| |||||    
T  22023608 ttcttagggtgtgtttggatggagggtttaggaggggagggtttacttttcatttataaat 22023548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 29002220 - 29002271
Alignment:
Q  130 tgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||| |||| || |||||||||||||| ||||||||||||||||||||||    
T  29002220 tgtgtttggatggagggtttaggaggggagggtttacttttcatttttaaat 29002271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 2550383 - 2550424
Alignment:
Q  147 tttaggaggggaaggtttacttttcatttttaaataacagac 188  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  2550383 tttaggaggggagggtttacttttcatttttaaattacagac 2550424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 10072655 - 10072712
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||||||| |||| || |||||| ||||||| |||||||||||||| |||||||    
T  10072655 taagggtgtgtttggatggagggtttaagaggggagggtttacttttcatatttaaat 10072712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 22023484 - 22023537
Alignment:
Q  233 ttatataatcgtttatcatgtgaatatgttaac-tttttagaaaacatttcata 285  Q
    |||||| |||||||||||||| ||||||||||| |||||| |||||||||||||    
T  22023484 ttatatgatcgtttatcatgttaatatgttaacttttttaaaaaacatttcata 22023537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 10650464 - 10650544
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagt 231  Q
    |||||||| | ||||||||| |||||||||| || |||  ||| | ||||||||| ||| ||| |||||||||||||||||    
T  10650464 ggaggggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagtgtgattgaagt 10650544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 259
Target Start/End: Original strand, 14681520 - 14681612
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    ||||| ||||||||| ||||| ||||||||||||||||  ||| ||| |||| |||||||||||   ||||| |  ||||||||||| |||||    
T  14681520 ttttcttttttaaattacagattatataacatgtttttttaaaataaattaaatgtgattgaaggaatatatgactgtttatcatgttaatat 14681612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 22022907 - 22022963
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaa 229  Q
    ||||||||| || ||||||||||||| |||||| ||| ||| |||||||||||||||    
T  22022907 tttttaaattacggactatataacatatttttctaaaataaattaagtgtgattgaa 22022963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 14245084 - 14245123
Alignment:
Q  122 tctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  14245084 tctaagggtgtgtttggattgagggtttaggaggggaagg 14245123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 1658022 - 1657964
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaa 209  Q
    |||||||| |||||||||||||||||||||| || |||  ||||| |||||||| ||||    
T  1658022 ggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaa 1657964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 13634708 - 13634746
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  13634708 ctaagggtgtgtttggattgagggtttaggaggggaagg 13634746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 15986871 - 15986833
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  15986871 ctaagggtgtgtttggattgagggtttaggaggggaagg 15986833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 10650544 - 10650585
Alignment:
Q  246 tatcatgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    |||||||  ||||||||||||||||| |||||||||||||||    
T  10650544 tatcatggtaatatgttaactttttataaaacatttcatagt 10650585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 11436929 - 11436974
Alignment:
Q  116 ttattttctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||| |||||| ||||| ||||||| |||||||||||||||||    
T  11436929 ttattttttaagggcgtgtttggattgagggtttaggaggggaagg 11436974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 34980812 - 34980845
Alignment:
Q  128 ggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||| |||||||||||||||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagg 34980845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 8551660 - 8551628
Alignment:
Q  128 ggtgtgttaggattgaaggtttaggaggggaag 160  Q
    |||||||| ||||||||||||||||||||||||    
T  8551660 ggtgtgtttggattgaaggtttaggaggggaag 8551628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 14245204 - 14245160
Alignment:
Q  244 tttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||||||| |||||||||||||| || ||||||||||| ||||    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtg 14245160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 5e-44; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 8529809 - 8529971
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgat 225  Q
    |||||| ||| ||||||| |||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||   || ||| |||||||||||    
T  8529809 agggtgcgtttggattgagggtttaggaggggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgat 8529908  T
Q  226 tgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||| |||||| |||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  8529909 tgaagtattatatgatcgtttaccatgttaatatgttaactttttaaaaaatatttcatagtg 8529971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 40095134 - 40095005
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgttttt-caaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaata 258  Q
    |||||||||||| ||||||||| |||||||||||||||||||||| | ||| ||| ||||||||||||||||| |||||| |||||||||||||| |||     
T  40095134 ggtttacttttcgtttttaaattacagactatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatt 40095035  T
Q  259 tgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||||||| ||||||||||||||||    
T  40095034 tgttaactttttataaaacatttcatagtg 40095005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 151 - 284
Target Start/End: Complemental strand, 32951527 - 32951394
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    ||||||||  ||||||||||| ||||||||| || ||||||| |||||||||||| ||| ||| ||||||||||||||||| |||||  |||||||||||    
T  32951527 ggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataaattaagtgtgattgaagtattatacgatcgtttatca 32951428  T
Q  251 tgtgaatatgttaactttttagaaaacatttcat 284  Q
    ||| ||||||||||||||||| ||||||||||||    
T  32951427 tgttaatatgttaactttttataaaacatttcat 32951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 137 - 288
Target Start/End: Complemental strand, 50744504 - 50744352
Alignment:
Q  137 ggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttat 236  Q
    ||||||| |||||||||||||| |||||  ||||| ||||||||| || |||||||||||| |||| || ||| ||| ||||||||||||||||| ||||    
T  50744504 ggattgagggtttaggaggggagggtttgtttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattat 50744405  T
Q  237 ataatcgtttatcatgtgaatatgttaact-ttttagaaaacatttcatagtg 288  Q
    || |||||||||||||| |||||||||||| ||| | ||||||||||||||||    
T  50744404 atgatcgtttatcatgttaatatgttaactctttaaaaaaacatttcatagtg 50744352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 151 - 286
Target Start/End: Complemental strand, 2859141 - 2859006
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||  ||||||||| || |||||||||||||||||||||||| ||| ||||||||||||||||| |||||| || |||||| |    
T  2859141 ggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgtgattgaagtattatatgattgtttataa 2859042  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatag 286  Q
    ||| | ||||||||||||||| | ||||||||||||    
T  2859041 tgtaagtatgttaactttttaaataacatttcatag 2859006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 51597703 - 51597840
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    ||||||||  ||||||||||| ||||||||| || |||||||||||||||||||  ||| ||| ||||||||||||||||| |||||| || ||||||||    
T  51597703 ggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgattgtttatca 51597802  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    | | ||||||||||||||||| ||| ||||||||||||    
T  51597803 tcttaatatgttaactttttaaaaaccatttcatagtg 51597840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 30010367 - 30010504
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| | |||||||||| | ||||||| || |||||||||||||||||||| ||| ||| ||||||||| ||||||| |||||| ||||||||| |    
T  30010367 ggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataaattaagtgtggttgaagtattatatgatcgtttataa 30010466  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| |||||||||||| |||| |||||||||| |||||    
T  30010467 tgttaatatgttaactatttaaaaaacatttcgtagtg 30010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 284
Target Start/End: Complemental strand, 44211134 - 44210981
Alignment:
Q  131 gtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaag 230  Q
    ||||| |||| || |||||||||||||||| ||||| |||| ||| ||||| |||| ||||||||| |||||||| ||| ||| ||||||||||||||||    
T  44211134 gtgtttggatcgagggtttaggaggggaagatttacatttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgattgaag 44211035  T
Q  231 ttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcat 284  Q
    | |||||| ||||||||||||||   ||| |||| |||||||| ||||||||||    
T  44211034 tattatatgatcgtttatcatgttgttattttaattttttagagaacatttcat 44210981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 152 - 276
Target Start/End: Original strand, 10391908 - 10392032
Alignment:
Q  152 gaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcat 251  Q
    ||||||| |||||||||||||||||||||| || |||||||| ||||||||||| ||| ||| |||| ||||||| |||| |||||| | ||||||||||    
T  10391908 gaggggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataaattaattgtgattaaagtattatatgaccgtttatcat 10392007  T
Q  252 gtgaatatgttaactttttagaaaa 276  Q
    || ||||||||||||||||| ||||    
T  10392008 gttaatatgttaactttttaaaaaa 10392032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 151 - 283
Target Start/End: Complemental strand, 35349671 - 35349539
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| ||||||||| || ||||||||||||| |||||| ||| |||  |||| || |||||||| |||||| || ||||||||    
T  35349671 ggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaataaactaagggttattgaagtattatatgattgtttatca 35349572  T
Q  251 tgtgaatatgttaactttttagaaaacatttca 283  Q
    ||| ||||||||||||||||| |||||||||||    
T  35349571 tgttaatatgttaactttttataaaacatttca 35349539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 152 - 288
Target Start/End: Original strand, 41498440 - 41498576
Alignment:
Q  152 gaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcat 251  Q
    ||||||| |||||||||||| ||||||||| |   ||||| ||||||| ||||| |   ||| ||||||||||||||||| |||||| ||||||||||||    
T  41498440 gaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataagttaagtgtgattgaagtattatatgatcgtttatcat 41498539  T
Q  252 gtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    || ||||||||||||||||| ||||||||||||||||    
T  41498540 gttaatatgttaactttttataaaacatttcatagtg 41498576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 38510103 - 38509966
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||| ||||| ||||||||  || |||||||||||||||||||| ||| ||| | ||||||||||||||| |||||| ||||||||||     
T  38510103 ggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatattatcgtttatcg 38510004  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| || ||||||| |||||| || |||||||||||||    
T  38510003 tgttaagatgttaattttttaaaagacatttcatagtg 38509966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 26941077 - 26940915
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgat 225  Q
    |||||||||| ||||||| ||||||||||||||||||| | ||||| ||||||||  || || | ||||||||||||||| ||| ||| | |||||||||    
T  26941077 agggtgtgtttggattgagggtttaggaggggaaggttcaattttcttttttaaaatacggattctataacatgtttttctaaaataaatcaagtgtgat 26940978  T
Q  226 tgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||| |||||| |  |||||  |||| |||| |||||||||| |  ||| |||||||||||    
T  26940977 tgaagtattatatgactgtttacgatgttaataagttaacttttaaacaaatatttcatagtg 26940915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 45585884 - 45585758
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| | || |||| || |||||||||||||||||||  ||| ||| ||||||||||| |||||  ||||| |||||||||||||| ||||||    
T  45585884 gtttacttttcctcttaaaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatg 45585785  T
Q  261 ttaactttttagaaaacatttcatagt 287  Q
    ||||||||| | ||||||||| |||||    
T  45585784 ttaacttttaaaaaaacattttatagt 45585758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 49946788 - 49946660
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    |||||||||||| | ||||||  | ||||||||||||||||||||  ||| ||| |||| |||||||||||| |||||| ||  |||||||||| |||||    
T  49946788 ggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataaattaaatgtgattgaagtattatatgataatttatcatgttaatat 49946689  T
Q  260 gttaactttttagaaaacatttcatagtg 288  Q
    |||||||||| | |||| |||| ||||||    
T  49946688 gttaacttttaaaaaaatattttatagtg 49946660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 2470966 - 2470865
Alignment:
Q  129 gtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattga 228  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |   ||||||||||||||||||| ||| ||   ||| |||||||||    
T  2470966 gtgtgtttggattgatggtttaggaggggaaggtttacttttcttttttaaattatcaactatataacatgtttttctaaaatacactaattgtgattga 2470867  T
Q  229 ag 230  Q
    ||    
T  2470866 ag 2470865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 7444574 - 7444667
Alignment:
Q  195 acatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||||| |||||||   ||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||| ||| ||||| ||||||    
T  7444574 acatgtttttctaaattaaaccaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaatcattttatagtg 7444667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 288
Target Start/End: Original strand, 12234003 - 12234182
Alignment:
Q  119 ttttctaagggtgtgttaggattgaaggtttaggaggggaaggt----------ttacttttcatttttaaataacagactatataacatgtttttcaaa 208  Q
    |||| |||||||||||| ||||||| |||||||||||||||||           ||| ||||| ||||||||| || |||||||||||||||||||| ||    
T  12234003 ttttttaagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaa 12234102  T
Q  209 attaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    | ||| | |||||||||||| || | |||| ||| | ||| |||| |||||| ||||||| || |||||||||| |||||    
T  12234103 aataaatcaagtgtgattgatgtataatatgatcatatattatgttaatatgctaactttataaaaaacatttcgtagtg 12234182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 36285717 - 36285646
Alignment:
Q  217 aagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| |||| |||| ||||||    
T  36285717 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtg 36285646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 42230615 - 42230710
Alignment:
Q  193 taacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||||||||| |||| ||| ||||||||||||||||| |||||| || |||||| |||| ||||| |||||||| || ||||||||| ||||||    
T  42230615 taacatgttttttaaaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattttaactttataaaaaacattttatagtg 42230710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 288
Target Start/End: Original strand, 6563628 - 6563748
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||||||||| |||||||||||||||||| |||| ||| ||| ||| |||| |||||| | |||||| ||| |||||||||| ||||| ||||||    
T  6563628 ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcatgttaatatattaact 6563726  T
Q  267 ttttagaaaacatttcatagtg 288  Q
    | ||| |||| | |||||||||    
T  6563727 tcttaaaaaatagttcatagtg 6563748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 20576269 - 20576208
Alignment:
Q  222 tgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttca 283  Q
    |||||||||| |||||| |||||||||||||| ||||| |||||| |||| |||||||||||    
T  20576269 tgattgaagtattatatgatcgtttatcatgttaatatattaactctttaaaaaacatttca 20576208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 41676363 - 41676427
Alignment:
Q  200 tttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaa 264  Q
    |||||| ||| ||| ||||||||||||| ||| |||||| |||||||||||||| ||||||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaa 41676427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 43552109 - 43552067
Alignment:
Q  243 gtttatcatgtgaatatgttaactttttagaaaacatttcata 285  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  43552109 gtttatcatgttaatatgttaactttttaaaaaacatttcata 43552067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 33643260 - 33643303
Alignment:
Q  118 attttctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||    
T  33643260 attttcttagggtgtgtttagattgaaggtttaggaggggaagg 33643303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 49832594 - 49832669
Alignment:
Q  163 ttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatat 238  Q
    ||||||||| ||||||||| |||||  ||||||  ||||||| |||| |||  |||||||||||||||| ||||||    
T  49832594 ttacttttcttttttaaattacagataatataaagtgttttttaaaaataaaataagtgtgattgaagtattatat 49832669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 26324013 - 26324049
Alignment:
Q  125 aagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  26324013 aagggtgtgtttggattgagggtttaggaggggaagg 26324049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 28770852 - 28770892
Alignment:
Q  245 ttatcatgtgaatatgttaactttttagaaaacatttcata 285  Q
    ||||||||| |||||||||| |||||| |||||||||||||    
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcata 28770892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 41498402 - 41498438
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaag 160  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  41498402 taagggtgtgtttggattgagggtttaggaggggaag 41498438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 41676489 - 41676437
Alignment:
Q  152 gaggggaaggtttacttttcatttttaaataacagactatataacatgttttt 204  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||||||    
T  41676489 gaggggagggtttacttttcatttttaaattacggacactataaaatgttttt 41676437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 8e-43; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 11575615 - 11575479
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||||||||||||| ||| | ||||||||||||||||| ||| ||| |||||||||||| |||| |||||| |||||||||||    
T  11575615 ggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgatcgtttatca 11575516  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    ||| ||||||||||||||||| |||||||||||||||    
T  11575515 tgttaatatgttaactttttaaaaaacatttcatagt 11575479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 124 - 285
Target Start/End: Original strand, 16652956 - 16653118
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaagg-tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgt 222  Q
    |||||||||||| ||||||| ||||| ||||||| ||| |||||||||| ||||||||| || |||||||||||||||||||  ||| ||| | ||||||    
T  16652956 taagggtgtgtttggattgagggttttggagggggagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgt 16653055  T
Q  223 gattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcata 285  Q
    ||||||||| |||||| |||||||||  ||| ||||||||||||||||  |||||||||||||    
T  16653056 gattgaagtattatatgatcgtttattttgttaatatgttaactttttcaaaaacatttcata 16653118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 7503163 - 7503027
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| ||||||||| |  || ||||||||||||||||| ||| ||| |||||||||||| |||| |||||| || ||||||||    
T  7503163 ggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgattgtttatca 7503064  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    ||| ||||||||||||||||| |||||||||||||||    
T  7503063 tgttaatatgttaactttttataaaacatttcatagt 7503027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 288
Target Start/End: Original strand, 37032388 - 37032551
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtg 223  Q
    ||||||| |||| ||||||||||||||||||||  || |||| ||||| ||||||||| ||||||||||||||||||||||  ||| ||| |||||||||    
T  37032388 taagggtttgtttggattgaaggtttaggagggagag-tttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtg 37032486  T
Q  224 attgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| |||| |||||| || ||||||||| | ||||||||||||||||| |||||| ||| |||||    
T  37032487 attaaagtattatatgatagtttatcatcttaatatgttaactttttaaaaaacacttcctagtg 37032551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 31543281 - 31543145
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| ||||||||| |  ||| |||||||||||||||| ||| ||| ||||||||||||||||| |||||| | ||||||| |    
T  31543281 ggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgaccgtttatga 31543182  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    ||| ||||||||||||||||  |||||||||||||||    
T  31543181 tgttaatatgttaacttttttaaaaacatttcatagt 31543145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 281
Target Start/End: Original strand, 30664407 - 30664526
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||| ||||| |||||||||  |||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||||||||| | |||||||    
T  30664407 tttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatatgt 30664506  T
Q  262 taactttttagaaaacattt 281  Q
    |||||||||| |||| ||||    
T  30664507 taactttttaaaaaatattt 30664526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 1027057 - 1026921
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||| | |||| ||||||| ||||||||| || |||||||||| ||||||||| ||| ||| |||||| |||||||||| |||||| |||||||||||    
T  1027057 ggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatca 1026959  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||||||||||||| | |||| |||||||||||    
T  1026958 tgttaatatgttaacttttgataaaatatttcatagtg 1026921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 288
Target Start/End: Original strand, 1281187 - 1281315
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    |||||||||||| ||||||||| || ||| |||||||||||||||| ||  ||| | ||||||| ||||||| |||||| ||||||||| |||| |||||    
T  1281187 ggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtggttgaagtattatattatcgtttattatgttaatat 1281286  T
Q  260 gttaactttttagaaaacatttcatagtg 288  Q
    |||||||||||| |||| |||||||||||    
T  1281287 gttaactttttaaaaaatatttcatagtg 1281315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 11033461 - 11033587
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||| ||| ||| ||| |||||||||||   |||||| |||||||||||||| |||||    
T  11033461 ggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaattatgtgtgattgaataattatatgatcgtttatcatgttaatat 11033560  T
Q  260 gttaacttttt-agaaaacatttcata 285  Q
    ||||| ||||| | |||||||||||||    
T  11033561 gttaattttttaaaaaaacatttcata 11033587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 41103706 - 41103572
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    |||||||||||| ||||||||| |||  |||||||||||||||||| ||| ||| ||||||||||||||||| |||||| |||||||||||||| | | |    
T  41103706 ggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattgt 41103607  T
Q  260 gttaactttttagaaaacatttcatagtgaccata 294  Q
     |||| |||||  ||||| |||||||||| |||||    
T  41103606 tttaatttttttaaaaacgtttcatagtgtccata 41103572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 285
Target Start/End: Complemental strand, 42650535 - 42650408
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgt---gaat 257  Q
    ||||||||||| ||||||||| || || ||||||||||||||||| ||| ||| ||||||||||||||||| |||||| || |||||||||||     ||    
T  42650535 gtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtataacat 42650436  T
Q  258 atgttaactttttagaaaacatttcata 285  Q
    |||||||||||||| |||||||||||||    
T  42650435 atgttaactttttataaaacatttcata 42650408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 37923266 - 37923150
Alignment:
Q  172 atttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaacttttta 271  Q
    |||||||||| ||||||||||||||||||||||| ||| ||| ||||||| |||| || | |||||| ||| |||||||||| ||||| |||||| ||||    
T  37923266 atttttaaattacagactatataacatgtttttctaaaataaattaagtgcgattaaaatattatatgatcatttatcatgttaatattttaactcttta 37923167  T
Q  272 gaaaacatttcatagtg 288  Q
     ||||||||||||||||    
T  37923166 aaaaacatttcatagtg 37923150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 6315119 - 6315234
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttag 272  Q
    ||||| ||| || |||||||||||||||||||| ||| ||| ||||||||||||||||| |||||  ||||||||||| || |||||||||| |||||      
T  6315119 ttttttaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaattttttta 6315218  T
Q  273 aaaacatttcatagtg 288  Q
    ||||||||||||||||    
T  6315219 aaaacatttcatagtg 6315234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 9718688 - 9718551
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttc-aaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    ||||||||| ||||||||||| ||||||||| |   |||||||||||| |||||| |||||| ||| || |||||||||||| |||||| || |||||||    
T  9718688 ggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaaattcatt-aattgtgattgaagtattatatgattgtttatc 9718590  T
Q  250 atgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||| |||||| |||||||||| ||| ||||||||||||    
T  9718589 atgttaatatgctaactttttaaaaaccatttcatagtg 9718551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 30479926 - 30479789
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||| ||| |||||| ||||| ||||||||  |||||||||||  |||||||||| ||| ||| | ||||||||||||||| |||||| ||| |||||||    
T  30479926 ggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataaatcaagtgtgattgaagtattatattatcatttatca 30479827  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
      | ||||||||||||||||| || |||||||||||||    
T  30479826 ccttaatatgttaactttttaaaagacatttcatagtg 30479789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 285
Target Start/End: Original strand, 11785555 - 11785695
Alignment:
Q  145 ggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgt 244  Q
    ||||||||||||||  ||||||||||| ||||||||| |   ||||||||||||||||||| ||| ||  |||| || ||||||||| ||||||  | ||    
T  11785555 ggtttaggaggggagagtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgt 11785654  T
Q  245 ttatcatgtgaatatgttaactttttagaaaacatttcata 285  Q
    ||||||||| |||||| |||||||||| |||| ||||||||    
T  11785655 ttatcatgttaatatgctaactttttaaaaaatatttcata 11785695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 287
Target Start/End: Original strand, 28083793 - 28083913
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||||||||| |||||| ||||||||||||| || ||| ||| ||||||||||||| ||| |||||| || |||||||||||  | |||||||||    
T  28083793 ttttcttttttaaattacagacaatataacatgtttctctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttgacatgttaact 28083892  T
Q  267 ttttagaaaacatttcatagt 287  Q
     |||| ||||||| |||||||    
T  28083893 ctttaaaaaacatatcatagt 28083913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 269
Target Start/End: Original strand, 36308852 - 36308996
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttca-aaattaatttaagtgtga 224  Q
    |||||||||| ||||| | ||||| |||||||| |||| | ||||| || |||||  | |||||||||||||||||||| | ||| |||  |||||||||    
T  36308852 agggtgtgtttggattaagggtttgggaggggagggttcatttttctttgttaaactagagactatataacatgttttttataaaataaactaagtgtga 36308951  T
Q  225 ttgaagttttatataatcgtttatcatgtgaatatgttaactttt 269  Q
    ||||||| |||||| || ||||||||||| |||||||| ||||||    
T  36308952 ttgaagtattatatgattgtttatcatgttaatatgtttactttt 36308996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 288
Target Start/End: Complemental strand, 40990377 - 40990254
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||||||||| || ||||||||||||||||| |  ||| ||| |||||| |||||||||| |||||| |||| ||||||||| ||||||||||||    
T  40990377 ttttcttttttaaattacggactatataacatgtttctttaaaataaattaagtctgattgaagtattatatgatcgcttatcatgttaatatgttaact 40990278  T
Q  267 tttt--agaaaacatttcatagtg 288  Q
     |||  | ||||||||||||||||    
T  40990277 ctttaaaaaaaacatttcatagtg 40990254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 31738480 - 31738595
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttag 272  Q
    ||||||||| |||||||||||||||||||| || | | ||| |||||||| |||||||| |||||| ||| |||||||||| |||||||||||| || |     
T  31738480 tttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaa 31738579  T
Q  273 aaaacatttcatagtg 288  Q
    |||| |||| ||||||    
T  31738580 aaaatattttatagtg 31738595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 264
Target Start/End: Original strand, 13405023 - 13405124
Alignment:
Q  163 ttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgtt 262  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| ||| |||  | | |||||| | |||||| |||||||||||||| |||| |||    
T  13405023 ttacttttcttttttaaataacagactatataacatgtttttctaaaataaattatatataattgaattattatatgatcgtttatcatgttaatacgtt 13405122  T
Q  263 aa 264  Q
    ||    
T  13405123 aa 13405124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 276
Target Start/End: Original strand, 33922520 - 33922680
Alignment:
Q  121 ttctaagggtgtgttaggattgaaggtttaggaggggaagg-----tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatt 215  Q
    |||| ||||| |||| ||||||| ||||||||| |||||||     |||||||||| |||||||||  | ||||||||||||| |||||  ||| ||| |    
T  33922520 ttcttagggtatgtttggattgagggtttaggaagggaagggagagtttacttttcttttttaaattccggactatataacatatttttttaaaataaat 33922619  T
Q  216 taagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaa 276  Q
    | ||| |||||||||| | |||| || ||||||||||  ||||||||||||||||| ||||    
T  33922620 ttagtatgattgaagtatgatatgattgtttatcatgataatatgttaactttttaaaaaa 33922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 7979185 - 7979307
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| || |||||||||||||||||||| ||| ||| | |||||  |||||||| |||||| ||  |||||||||| |||| |    
T  7979185 gtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgcaattgaagtattatatgattatttatcatgttaataag 7979284  T
Q  261 ttaactttttagaaaacatttca 283  Q
    ||||  |||||  ||||||||||    
T  7979285 ttaaacttttaataaacatttca 7979307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 288
Target Start/End: Complemental strand, 29358532 - 29358412
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||||||||||||  || || |||||||||| |||||| | | ||| ||||||||||||||||| |||||  ||||||||| |||| |||||||||| |    
T  29358532 ttttcatttttaaactacggattatataacatatttttctagaataaattaagtgtgattgaagtattataggatcgtttataatgttaatatgttaa-t 29358434  T
Q  267 ttttagaaaacatttcatagtg 288  Q
    ||||| |||| |||| ||||||    
T  29358433 ttttaaaaaatattttatagtg 29358412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 3727054 - 3726962
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgt 253  Q
    ||||||||||| |||||| || ||||||||||||||||||||||| ||| ||| |||||  |||||||| | |||||| | ||||||||||||    
T  3727054 gtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattgaaatattatatgaccgtttatcatgt 3726962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 29691067 - 29690995
Alignment:
Q  215 ttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    ||||||||||||||||| | |||| |||||||||||||| ||||||||||||||||  |||| ||||| ||||    
T  29691067 ttaagtgtgattgaagtatcatatgatcgtttatcatgttaatatgttaacttttttaaaaatatttcctagt 29690995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 38198245 - 38198156
Alignment:
Q  163 ttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgt 253  Q
    ||||||||||||||||||| ||||||  |||||  ||||||| ||||| || ||||||||||||||||| |||||| ||| | ||||||||    
T  38198245 ttacttttcatttttaaattacagacactataaagtgttttttaaaatgaa-ttaagtgtgattgaagtattatatgatcatatatcatgt 38198156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 1026863 - 1026914
Alignment:
Q  130 tgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||| |||| || |||||||||||||| ||||||||||||||||||||||    
T  1026863 tgtgtttggatggagggtttaggaggggagggtttacttttcatttttaaat 1026914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 288
Target Start/End: Original strand, 2248525 - 2248624
Alignment:
Q  189 tatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||||||||||| ||| ||| | ||||||||||| | | |||||| | ||||||  |||| |||| |||||||||| | |||| |||||||||||    
T  2248525 tatataacatgtttttctaaaataaatcaagtgtgattggaatattatatgaccgtttacgatgttaataagttaacttttaaaaaaatatttcatagtg 2248624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 7502962 - 7503019
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||||||| ||||||| ||||| |||||||| ||||| |||| |||||||||||    
T  7502962 taagggtgtgtttggattgagggtttgggaggggagggtttgctttccatttttaaat 7503019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 4247680 - 4247596
Alignment:
Q  197 atgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacattt 281  Q
    ||||||||  ||| ||| |||||| ||||| |||| |||||| |||||||||||||  ||||||||||||| ||| |||| ||||    
T  4247680 atgtttttttaaaataaattaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaaatattt 4247596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 4247764 - 4247729
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||| |||||||||||||||||||||||||    
T  4247764 agggtgtgtttggattgaaggtttaggaggggaagg 4247729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 29358354 - 29358405
Alignment:
Q  130 tgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||| |||| || ||||||||||| |||||||||||||| ||||||||||    
T  29358354 tgtgtttggatggagggtttaggaggagaaggtttactttttatttttaaat 29358405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 159
Target Start/End: Complemental strand, 12022392 - 12022354
Alignment:
Q  121 ttctaagggtgtgttaggattgaaggtttaggaggggaa 159  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  12022392 ttctaagggtgtgtttggattgagggtttaggaggggaa 12022354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 43732676 - 43732714
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  43732676 ctaagggtgtgtttggattgagggtttaggaggggaagg 43732714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 9718487 - 9718544
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||||||| |||| || |||||||||||||| ||||   |||||||||||||||    
T  9718487 taagggtgtgtttggatggagggtttaggaggggagggttcgattttcatttttaaat 9718544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 8e-40; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 37102383 - 37102221
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgt-ttttcaaaattaatttaagtgtga 224  Q
    |||||||||| ||||||| |||||||||||||||||||||||| || ||||||||| || ||||||||||||||| ||||| ||| ||| | |||||||     
T  37102383 agggtgtgtttggattgagggtttaggaggggaaggtttacttatcttttttaaattacggactatataacatgttttttctaaaataaatcaagtgtgg 37102284  T
Q  225 ttgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||| |||||| |||| |||| |||| ||||||||||||||||| ||||||||||||||||    
T  37102283 ttgaagtattatatgatcg-ttattatgttaatatgttaactttttaaaaaacatttcatagtg 37102221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 41110530 - 41110393
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||| |||||||||||||||| ||||||||| || ||||| |||||||||||||| ||| ||| ||||||||||||||||| |||||| || ||||||||    
T  41110530 ggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataaattaagtgtgattgaagtattatatgattgtttatca 41110431  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||||||||||||||| |||| |||||||||||    
T  41110430 tgttaatatgttaactttttataaaatatttcatagtg 41110393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 123 - 288
Target Start/End: Complemental strand, 2387997 - 2387832
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgt 222  Q
    ||||||||||||| ||||||| ||||| |||||||| |||||||||||| ||| ||||| || | |||||||||||||||||| ||| ||| ||||||||    
T  2387997 ctaagggtgtgtttggattgagggtttgggaggggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgt 2387898  T
Q  223 gattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||| || | |||||| |||||||||||||| | ||| ||||||| ||| |||||||| |||||||    
T  2387897 gattaaattattatatgatcgtttatcatgttattattttaacttattaaaaaacattccatagtg 2387832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 24560252 - 24560389
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||  ||||| ||||||||| || |||||| ||||||||||||| ||| ||| |||| |||||||||||| |||||| |||||||||||    
T  24560252 ggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatca 24560351  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||||||||||||||| ||||||||||||||||    
T  24560352 tgttaatatgttaactttttaaaaaacatttcatagtg 24560389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 21773778 - 21773954
Alignment:
Q  122 tctaagggtgtgttaggattgaaggtttaggaggggaagg----------tttacttttcatttttaaataacagactatataacatgtttttcaaaatt 211  Q
    ||||||||| |||| |||||||||||||||||||||||||          | |||||||| ||| ||||| || |||||||||||||||||||| ||| |    
T  21773778 tctaagggtatgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaat 21773877  T
Q  212 aatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    || ||||||||||||||||  |||||| || ||||||||||| ||||||||||||||||| |||||||||| |||||    
T  21773878 aaattaagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtg 21773954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 124 - 288
Target Start/End: Original strand, 46556151 - 46556317
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtg 223  Q
    |||||||  ||| ||||||| ||||||||||||||  ||||| ||||| ||||||||| ||||||||||||| ||||||||| ||| ||| || ||||||    
T  46556151 taagggtacgtttggattgagggtttaggaggggagagtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtg 46556250  T
Q  224 attgaagttttatata--atcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||||| |||||||  | ||||| |||||| ||||| ||||||||||| |||| || ||||||||    
T  46556251 attgaagtattatatatgaccgtttgtcatgttaatatcttaactttttaaaaaatatgtcatagtg 46556317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 123 - 287
Target Start/End: Original strand, 651737 - 651901
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaagg-tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtg 221  Q
    ||||||||||||| ||||||| ||||||||||||| ||| |||||||||| ||||||||| | ||||||||||||||||||||| ||| ||| |||||||    
T  651737 ctaagggtgtgtttggattgagggtttaggagggggagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaattaagtg 651836  T
Q  222 tgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    ||||| || | |||||  ||| ||| |||||| | ||| |||| |||||  |||||||||||||||    
T  651837 tgattaaaatattatacgatcctttgtcatgttattattttaa-tttttcaaaaacatttcatagt 651901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 25655181 - 25655042
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatata--atcgtttat 248  Q
    |||||||| ||||||  |||||||||||||| || |||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||  ||| |||||    
T  25655181 ggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatatgatcatttat 25655082  T
Q  249 catgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| | |||||||||||| || | |||||||||| |||||    
T  25655081 catattaatatgttaactcttcaaaaaacatttcttagtg 25655042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 288
Target Start/End: Original strand, 37807129 - 37807252
Alignment:
Q  165 acttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaa 264  Q
    ||||||| ||||||||  ||  |||||||||||| ||||  ||||| || ||||||||||||||||| |||||| |||||||||||||| ||||| ||||    
T  37807129 acttttcttttttaaactacgaactatataacattttttaaaaaataaaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatattaa 37807228  T
Q  265 ctttttagaaaacatttcatagtg 288  Q
    ||||||| ||||||||||||||||    
T  37807229 ctttttaaaaaacatttcatagtg 37807252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 14898022 - 14898128
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||||||| |||||| |||||||||| ||| ||||| |    
T  14898022 tttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcgtgttaatatat 14898121  T
Q  262 taacttt 268  Q
    |||||||    
T  14898122 taacttt 14898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 220595 - 220472
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||||||||| ||||||||| || |||||| ||||||||||||| ||| ||| | |||| |||||||||| |||||  || |||||| |||| |||||||    
T  220595 tttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaatcaagtatgattgaagtgttataagattgtttattatgttaatatgt 220496  T
Q  262 taactttttagaaaacatttcata 285  Q
    |||||||||| |||||||||||||    
T  220495 taactttttaaaaaacatttcata 220472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 30200300 - 30200160
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatc---gttta 247  Q
    |||||| | |||||||||||| ||||||||| || |||||||||||||||||||| ||| ||| | |||||||||| ||||  ||||| |||   |||||    
T  30200300 ggagggaagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagtactatatgatcgttgttta 30200201  T
Q  248 tcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    | |||| ||||||| ||||||||| ||||||||||||||||    
T  30200200 ttatgttaatatgtaaactttttaaaaaacatttcatagtg 30200160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 9312683 - 9312543
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacat---gtttttcaaaattaatttaagtgtgattgaagttttatataatcgttta 247  Q
    |||||||| |||||  ||||| ||||||||| || |||||||||||||   | ||||| ||| ||| ||||||||||||  ||| |||||| || |||||    
T  9312683 ggaggggagggtttgattttcttttttaaattaccgactatataacatcatgattttctaaaataaattaagtgtgatttgagtattatatgattgttta 9312584  T
Q  248 tcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||| ||||||||||||||||| |||| |||||||||||    
T  9312583 tcatgttaatatgttaactttttacaaaatatttcatagtg 9312543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 41040159 - 41040022
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    ||||| || ||||||||||||  |||||||| || || || |||||||| ||||  ||| |||  |||| ||||||||||| |||||| || ||||||||    
T  41040159 ggaggagagggtttacttttcgcttttaaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattatatgattgtttatca 41040060  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||||||||||||||| |||| |||||||||||    
T  41040059 tgttaatatgttaactttttataaaatatttcatagtg 41040022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 281
Target Start/End: Original strand, 52185029 - 52185181
Alignment:
Q  130 tgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgttttt-caaaattaatttaagtgtgattga 228  Q
    |||||| |||||||  |||| | ||||||  ||||||||||| ||||||||| ||| | |||||||||||||||| | ||| ||| |||| | | |||||    
T  52185029 tgtgtttggattgagagtttggaaggggatagtttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattga 52185128  T
Q  229 agttttatataatcgtttatcatgtgaatatgttaactttttagaaaacattt 281  Q
    ||| |||||| || ||||||||||| ||||||||||||||||| |||| ||||    
T  52185129 agtattatatgattgtttatcatgttaatatgttaactttttataaaatattt 52185181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 16275875 - 16275780
Alignment:
Q  190 atataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcata 285  Q
    |||||||||||||||| ||| ||| | ||||||||||||||| ||||||  | ||||||||||| |||| |||||||||||| |||||||||||||    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcata 16275780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 54574600 - 54574470
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaagg-----tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagt 220  Q
    |||||||||| ||||||| ||||||||| |||||||     |||  ||||| ||||| ||| ||||||||||||||| ||||||| ||| ||| |||||     
T  54574600 agggtgtgtttggattgagggtttaggaagggaagggatagtttgtttttctttttttaattacagactatataacacgtttttctaaaataaattaagc 54574501  T
Q  221 gtgattgaagttttatataatcgtttatcat 251  Q
    ||||||||||| |||||||| ||||||||||    
T  54574500 gtgattgaagtattatataaccgtttatcat 54574470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 18654787 - 18654694
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||||||| || ||||||||||||||||| || ||| ||| |||||||| |||||||| |||||| ||| |||||||||| ||||||||||||    
T  18654787 tttttaaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaact 18654694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 36569072 - 36568975
Alignment:
Q  191 tataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||| |||||||||| ||| ||| ||||||||||||||| | |||||  || ||||||||||| ||||||||||||||||  ||||||||||||||||    
T  36569072 tatatcatgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtg 36568975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 28582718 - 28582610
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| ||||||||| || ||| |||||||||||||||| ||  ||| | ||||||| ||||||| |||||| ||||||||| |    
T  28582718 ggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgtggttgaagtattatattatcgtttatta 28582619  T
Q  251 tgtgaatat 259  Q
    ||| |||||    
T  28582618 tgttaatat 28582610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 46204931 - 46205033
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| |   ||||||||||||||||||| ||| ||| ||||||||||||||||| |||||| ||| |||| ||| | ||||||    
T  46204931 gtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcatttaacatattaatatg 46205030  T
Q  261 tta 263  Q
    |||    
T  46205031 tta 46205033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 288
Target Start/End: Complemental strand, 27542104 - 27542003
Alignment:
Q  187 actatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatag 286  Q
    |||||||||||| |||||| ||| ||| |||| |||||||||||| |||||| |||||||||||||| |||||||||  ||||||  ||  |||||||||    
T  27542104 actatataacatatttttctaaaataaattaactgtgattgaagtattatatgatcgtttatcatgttaatatgttagatttttaacaagtatttcatag 27542005  T
Q  287 tg 288  Q
    ||    
T  27542004 tg 27542003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 43005937 - 43005814
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttc-aaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    |||| ||||| |||||||||  || |||||||||||| |||||| ||||| ||||||| | |||||||||| |||||| ||  |||||||| | ||||||    
T  43005937 tttaattttcttttttaaattccaaactatataacatatttttctaaaataaatttaatt-tgattgaagtattatatgatattttatcatattaatatg 43005839  T
Q  261 ttaactttttagaaaacatttcata 285  Q
    ||||||||||| |||| ||||||||    
T  43005838 ttaactttttaaaaaatatttcata 43005814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 52473966 - 52474085
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||||||||| || || ||||||||||||| ||  ||| ||| |||  |||||||||||| |||||| |  ||||||||| | ||||||||||||    
T  52473966 ttttcttttttaaattacggattatataacatgttattttaaaataaattacatgtgattgaagtattatatgactgtttatcatattaatatgttaact 52474065  T
Q  267 ttttagaaaacatttcatag 286  Q
    ||||| |||| |||||||||    
T  52474066 ttttacaaaatatttcatag 52474085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 46978441 - 46978564
Alignment:
Q  130 tgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaa 229  Q
    |||||| ||||||| |||||||||||||| |||| |||||| |||||||||| ||  ||  | ||| ||||||||  ||| ||| |||| |||  |||||    
T  46978441 tgtgtttggattgagggtttaggaggggagggttcacttttaatttttaaattacgaacggtgtaaaatgtttttttaaaataaattaaatgtttttgaa 46978540  T
Q  230 gttttatataatcgtttatcatgt 253  Q
    || |||||||||| ||||||||||    
T  46978541 gtattatataatcatttatcatgt 46978564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 10748484 - 10748369
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttata-------taatcgtttatcatgtgaatatgttaac 265  Q
    ||||||||| || || ||||||||||||||||| ||| ||| |||||||||||  |||| |||||       | ||| |||||||||| |||||||||||    
T  10748484 tttttaaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattatatgaccttttatcatttatcatgttaatatgttaac 10748385  T
Q  266 tttttagaaaacattt 281  Q
    |||||| |||||||||    
T  10748384 tttttaaaaaacattt 10748369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 37102157 - 37102214
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||||||| |||| || |||||||||||||| |||||| |||||||||||||||    
T  37102157 taagggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaat 37102214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 285
Target Start/End: Original strand, 55327422 - 55327539
Alignment:
Q  168 tttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactt 267  Q
    |||| ||||||||| || ||||| |||||||| |||||  || ||| | || |||||||||||  ||||||  |||||||| |||| |||| | ||||||    
T  55327422 tttcttttttaaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattatatgttcgtttattatgttaatacgctaactt 55327521  T
Q  268 tttagaaaacatttcata 285  Q
    |||| |||||||||||||    
T  55327522 tttaaaaaacatttcata 55327539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 30200093 - 30200153
Alignment:
Q  121 ttctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||| |||||||||| |||| || |||||||||||||| |||||| |||||||||||||||    
T  30200093 ttcttagggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaat 30200153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 37236970 - 37237059
Alignment:
Q  163 ttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgt 253  Q
    ||||||||||||||||||| ||||||  || || |||||||| |||| ||| |||||||||||||||||  || || ||| ||||||||||    
T  37236970 ttacttttcatttttaaattacagacgctacaaaatgtttttgaaaa-taaattaagtgtgattgaagtactaaatgatcatttatcatgt 37237059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 40464079 - 40463978
Alignment:
Q  152 gaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcat 251  Q
    |||||||  ||||||||||| ||| ||||| |  | ||| ||||||| |||||| ||| ||| ||||||| ||||||| |||||||| || |||||||||    
T  40464079 gaggggagagtttacttttcttttctaaatcaagggctacataacatatttttctaaaataaattaagtgagattgaatttttatatgattgtttatcat 40463980  T
Q  252 gt 253  Q
    ||    
T  40463979 gt 40463978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 51819317 - 51819232
Alignment:
Q  168 tttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgt 253  Q
    |||||||||||||||  ||| ||||||| || |||||  ||| ||| || |||||||||||||| |||||  ||||||||||||||    
T  51819317 tttcatttttaaatattagattatataatatatttttttaaaataaatttagtgtgattgaagtattatacgatcgtttatcatgt 51819232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 13083005 - 13082953
Alignment:
Q  217 aagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttt 269  Q
    |||||| |||||||| |||||| ||||||||| |||| |||||||||||||||    
T  13083005 aagtgtaattgaagtattatatgatcgtttattatgttaatatgttaactttt 13082953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 42699853 - 42699721
Alignment:
Q  119 ttttctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaa 218  Q
    |||||| ||||||| || |||| || |||||||||||||| |  | ||||||  ||||||||| ||  || |||||| || ||||| |||| ||| ||||    
T  42699853 ttttcttagggtgtttttggatcgagggtttaggaggggaggactcactttttgtttttaaattacgaacaatataaaatatttttaaaaaataaattaa 42699754  T
Q  219 gtgtgattgaagttttatataatcgtttatcat 251  Q
    ||||  ||||||| |||||| ||| ||||||||    
T  42699753 gtgtttttgaagtattatatgatcatttatcat 42699721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 21774016 - 21773961
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||||| ||||  | |||||||||||||| ||||||||||| ||||||||||    
T  21774016 agggtgtgtttggatgaagggtttaggaggggagggtttactttttatttttaaat 21773961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 34641002 - 34641129
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgat 225  Q
    |||||||||| ||||||| |||||||||||||| || | ||||||  ||||||||| ||  || || ||| | | ||||  ||| ||| ||||||||  |    
T  34641002 agggtgtgtttggattgagggtttaggaggggagggctcacttttattttttaaattacgaacaatgtaaaaggattttttaaaataaattaagtgtttt 34641101  T
Q  226 tgaagttttatataatcgtttatcatgt 253  Q
    |||||| |||||| ||| ||||||||||    
T  34641102 tgaagtattatatgatcatttatcatgt 34641129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 24560210 - 24560252
Alignment:
Q  119 ttttctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||||||||||||| ||||| | |||||||||||||||||    
T  24560210 ttttctaagggtgtgtttggattaagggtttaggaggggaagg 24560252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 40858798 - 40858744
Alignment:
Q  127 gggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    ||||||||| |||| || |||||||||||||| |||||| ||||| |||||||||    
T  40858798 gggtgtgtttggatggagggtttaggaggggagggtttagttttcttttttaaat 40858744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 220406 - 220462
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    ||||||||| || |||| || ||||||||||||| ||||||| |||||||||||||||    
T  220406 taagggtgtatttggatggagggtttaggagggg-aggtttagttttcatttttaaat 220462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 6803447 - 6803411
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaag 160  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  6803447 taagtgtgtgtttggattgaaggtttaggaggggaag 6803411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 24253716 - 24253756
Alignment:
Q  121 ttctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||||||||||| ||||||| |||||||||||| ||||    
T  24253716 ttctaagggtgtgtttggattgagggtttaggagggaaagg 24253756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 238
Target Start/End: Original strand, 25179896 - 25180016
Alignment:
Q  118 attttctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaattta 217  Q
    |||| ||| |||| |||| ||||||| || || |||||||| |  ||||||||||||||||||| |  |||  ||||| ||||| ||   || |||||||    
T  25179896 atttactaggggtttgtttggattgagggctttggaggggaggacttacttttcatttttaaattatggacactataaaatgttctttggaaataattta 25179995  T
Q  218 agtgtgattgaagttttatat 238  Q
    |||||||||||| | ||||||    
T  25179996 agtgtgattgaaatattatat 25180016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 42772271 - 42772223
Alignment:
Q  121 ttctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttt 169  Q
    |||| |||||||||| | || || |||||||||||||||||||||||||    
T  42772271 ttcttagggtgtgtttgaatggagggtttaggaggggaaggtttacttt 42772223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 49815433 - 49815543
Alignment:
Q  127 gggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagacta-tataacatgtttttcaaaattaatttaagtgtgat 225  Q
    |||| |||| |||| || ||||| |||||||| || ||||||||| ||||||||| ||| | || ||||| |||||||| ||||| |||| ||| |||||    
T  49815433 gggtatgttgggatggagggttttggaggggagggcttacttttcttttttaaattaca-agtactataaaatgtttttaaaaataaatt-aagcgtgat 49815530  T
Q  226 tgaagttttatat 238  Q
    |||||| ||||||    
T  49815531 tgaagtattatat 49815543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 31348530 - 31348393
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||||||||||| ||| ||| ||| ||||||||||| | |||||| || ||||||||    
T  31348530 ggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattatgtgtgattgaattattatatgattgtttatca 31348431  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||||||| ||||||| ||||||||||||||||    
T  31348430 tgttaatatgttagctttttaaaaaacatttcatagtg 31348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 45741936 - 45742062
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||||||||  ||||||||| || ||||||||||| |||||||| ||| ||| |||| |||||||||||| |||||| |||||||||||||| |||||||    
T  45741936 tttacttttgttttttaaattacggactatataacttgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgt 45742035  T
Q  262 taactttttagaaaacatttcatagtg 288  Q
    |||||||||| ||||||||||||||||    
T  45742036 taactttttaaaaaacatttcatagtg 45742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 288
Target Start/End: Original strand, 54935106 - 54935241
Alignment:
Q  154 ggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagt-tttatataatcgtttatcatg 252  Q
    ||||| |||||||||||| ||||||||| ||  ||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||| ||||||||||||     
T  54935106 ggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataaattaagtgtgattgaagtatttatatgatcgtttatcata 54935205  T
Q  253 tgaatatgttaactttttagaaaacatttcatagtg 288  Q
    | |||||| |||||||||| || |||||||||||||    
T  54935206 ttaatatgataactttttaaaatacatttcatagtg 54935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 288
Target Start/End: Original strand, 26166988 - 26167109
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||||||||| |||||||||||||||||||| || ||| ||| ||||||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  26166988 ttttcttttttaaattacagactatataacatgtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 26167087  T
Q  267 ttttagaaaacatttcatagtg 288  Q
     || | ||||||||||| ||||    
T  26167088 cttaaaaaaacatttcaaagtg 26167109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 288
Target Start/End: Original strand, 27735789 - 27735917
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    |||||| ||||||||||||||| || |||||||||||||||||||  ||| ||| ||||||||||||||||| |||||| ||| |||||||||| |||||    
T  27735789 ggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgttaatat 27735888  T
Q  260 gttaactttttagaaaacatttcatagtg 288  Q
    | ||||| |||| ||||||||| ||||||    
T  27735889 gctaactctttaaaaaacattttatagtg 27735917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 151 - 276
Target Start/End: Complemental strand, 46007910 - 46007785
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| |||||||||  ||||||||||||| |||||||  ||| ||| ||||||| ||||||||| |||||| ||| |||||||    
T  46007910 ggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataaattaagtgagattgaagtattatatgatcatttatca 46007811  T
Q  251 tgtgaatatgttaactttttagaaaa 276  Q
    ||| ||||||||||||||||| ||||    
T  46007810 tgttaatatgttaactttttaaaaaa 46007785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 269
Target Start/End: Complemental strand, 1968605 - 1968450
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaagg----------tttacttttcatttttaaataacagactatataacatgtttttcaaaattaa 213  Q
    |||||||||||| ||||||| |||||||||||||||||          |||| ||||||||||||||| || |||||||||| ||||||||| ||| |||    
T  1968605 taagggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaataa 1968506  T
Q  214 tttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttt 269  Q
     | | ||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  1968505 atcaggtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttt 1968450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 36151637 - 36151729
Alignment:
Q  177 taaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttt 269  Q
    ||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  36151637 taaattacagactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttt 36151729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 288
Target Start/End: Original strand, 54320485 - 54320606
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||||||||| || ||||||||| |||||||||| ||| ||| ||||||||||||| ||| |||||| || ||||||||||| |||||| |||||    
T  54320485 ttttcttttttaaattaccgactatatatcatgtttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaact 54320584  T
Q  267 ttttagaaaacatttcatagtg 288  Q
    ||||| ||||| ||||||||||    
T  54320585 ttttaaaaaacgtttcatagtg 54320606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 288
Target Start/End: Original strand, 29798281 - 29798457
Alignment:
Q  119 ttttctaagggtgtgttaggattgaaggtttaggaggggaag----------gtttacttttcatttttaaataacagactatataacatgtttttcaaa 208  Q
    |||| |||||||||||| ||||||| ||||||||||||||||          ||||||||||  ||||||||| |||||||||||||||||||||||       
T  29798281 ttttttaagggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttc--- 29798377  T
Q  209 attaatttaagtgtgattgaagttttatataatcgtttatcatg-tgaatatgttaactttttagaaaacatttcatagtg 288  Q
     |||| | ||||||||||||||| |||||| ||||||||| ||| | || ||||||| |||||| ||||||||||||||||    
T  29798378 -ttaaatcaagtgtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtg 29798457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 41174356 - 41174517
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgat 225  Q
    |||||||||| ||||||| |||||||||||||| || ||| ||| | ||||||||| |  ||||||||| |||||||||| ||| ||| | || ||||||    
T  41174356 agggtgtgtttggattgagggtttaggaggggatggcttaattt-cttttttaaattagggactatatagcatgtttttctaaaataaatcaaatgtgat 41174454  T
Q  226 tgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| || |||||| ||| ||||| |||| |||||| |||||||||| ||| ||||||||||||    
T  41174455 tgatgtattatatgatcatttattatgttaatatgctaactttttaaaaaccatttcatagtg 41174517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 49735669 - 49735544
Alignment:
Q  159 aggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaata 258  Q
    ||||||| ||||| ||||||||  || |||||||||||||||||||| ||| ||| | ||||||||| ||| | |||||| |||||||||||||| ||||    
T  49735669 aggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaatattatattatcgtttatcatgttaata 49735570  T
Q  259 tgttaactttttagaaaacatttcat 284  Q
     |||||||||||| || |||||||||    
T  49735569 ggttaactttttaaaagacatttcat 49735544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 47433918 - 47433775
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactata-taacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    |||| ||| |||||||||||| ||||||||| |||||||||| ||||||||||||  ||| ||| ||||||||||||||||| |||||| |||||||||     
T  47433918 ggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcgtttat- 47433820  T
Q  250 atgtgaatatgttaactttttagaaaacatttcatagtgaccata 294  Q
    |||| | ||| |||| |||||| |||||||| |||| || |||||    
T  47433819 atgttattattttaattttttaaaaaacattccataatgtccata 47433775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 6891396 - 6891538
Alignment:
Q  152 gaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcat 251  Q
    |||||||  ||||| ||||| ||||||||  ||| | ||||||||||||||||| ||| ||| ||||||||||||||||| |||||| ||||||||| ||    
T  6891396 gaggggatagtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttataat 6891495  T
Q  252 gtgaatatgttaactttttagaaaacatttcatagtgaccata 294  Q
    || | ||| |||| |||||  |||||| ||||||||| |||||    
T  6891496 gttattattttaatttttttaaaaacaattcatagtgtccata 6891538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 28332850 - 28332976
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||||||||| ||||||||| ||| ||||||||||| ||||||| ||| ||| |||||| |||||||||| |||||| |||||||| || || ||||||     
T  28332850 tttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgtttaccaggttaatatgc 28332949  T
Q  262 taactttttagaaaacatttcatagtg 288  Q
    |||  |||||||||| ||||| |||||    
T  28332950 taatgttttagaaaatatttcgtagtg 28332976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 44784038 - 44784163
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||||||||| ||||||||| ||| || |||||||| ||||||| ||| ||| ||||||||||||||||| |||||| ||||||||| | || |||||||    
T  44784038 tttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatatgt 44784137  T
Q  262 taactttttagaaaacatttcatagtg 288  Q
    ||||  ||||||||| ||||| |||||    
T  44784138 taac-gtttagaaaatatttcgtagtg 44784163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 16400871 - 16400972
Alignment:
Q  187 actatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatag 286  Q
    |||||| |||||||||||| ||| ||| |||| | |||||||||| |||||| |||||||||||||| ||||||||||||||||| |||  |||||||||    
T  16400871 actatacaacatgtttttctaaaataaattaattatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcatag 16400970  T
Q  287 tg 288  Q
    ||    
T  16400971 tg 16400972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 35248738 - 35248839
Alignment:
Q  168 tttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactt 267  Q
    |||| ||||||||| || |||||||||||||||||||| ||| ||| ||||||||||||||||| |||||| ||  |||||||||| |||| ||||||||    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaactt 35248837  T
Q  268 tt 269  Q
    ||    
T  35248838 tt 35248839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 45132695 - 45132574
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    |||||||||||| ||||||||| || |||||||||| ||||      ||| ||| ||||||||||||||||| |||||| |||||||||||| | |||||    
T  45132695 ggtttacttttcttttttaaattacggactatataatatgt------aaaataaattaagtgtgattgaagtattatatgatcgtttatcattttaatat 45132602  T
Q  260 gttaactttttagaaaacatttcatagtg 288  Q
    |||||||||||| |||||||||| |||||    
T  45132601 gttaacttttta-aaaacatttcgtagtg 45132574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 259
Target Start/End: Original strand, 37711178 - 37711286
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||  ||||| ||||||||| || ||||||||||||||||| || ||| ||| ||||||||||||||||| |||||| ||| |||||||    
T  37711178 ggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaaaataaattaagtgtgattgaagtattatatgatcatttatca 37711277  T
Q  251 tgtgaatat 259  Q
    ||| |||||    
T  37711278 tgttaatat 37711286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 294
Target Start/End: Complemental strand, 17938307 - 17938173
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaa-aattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    ||||||||||| ||||||||| ||| |||||||||||| |||||    || ||| ||||||||||||||||| |||||| |||||||||||||| | |||    
T  17938307 gtttacttttcttttttaaattacaaactatataacatatttttttttaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattat 17938208  T
Q  260 gttaactttttagaaaacatttcatagtgaccata 294  Q
     |||| |||||| |||||||| |||| || |||||    
T  17938207 tttaaatttttaaaaaacattccataatgtccata 17938173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 5731017 - 5730924
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||||||| || ||||||||||||||||| || ||| ||| |||||||| |||||||| |||||| ||| |||||||||| ||||||||||||    
T  5731017 tttttaaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaact 5730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 2917150 - 2917061
Alignment:
Q  173 tttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgtt 262  Q
    |||||||||  | |||||||||||||| ||||| ||| ||| || | |||||||||||| |||||| |||||||||||||| ||||||||    
T  2917150 tttttaaattccggactatataacatgattttctaaaataaatttattgtgattgaagtattatatgatcgtttatcatgttaatatgtt 2917061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 2248000 - 2247882
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||| |||  || | | ||||||||||||| ||||||||| ||||||||| | |||| |    
T  2248000 gtttacttttcttttttaaattacaga-tatataacatgtttttctaaaaaaaat-atgtgtgattgaagtattatataattgtttatcatattaataag 2247903  T
Q  261 ttaactttttagaaaacattt 281  Q
    ||||  |||||  ||||||||    
T  2247902 ttaagattttaataaacattt 2247882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 34110905 - 34110972
Alignment:
Q  216 taagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttca 283  Q
    |||||||| || || | |||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  34110905 taagtgtgcttaaaatattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttca 34110972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 22921027 - 22921117
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaa-aattaatttaagtgtgattgaagttttatataatcgtttatcat 251  Q
    ||||| |||| ||||||||| ||| |||| |||||||||||||| | ||| |||  ||||||||||||||| |||||| ||||||||||||    
T  22921027 tttacgtttcttttttaaattacaaactacataacatgtttttctagaataaatcaaagtgtgattgaagtattatatgatcgtttatcat 22921117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 22970772 - 22970682
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaa-aattaatttaagtgtgattgaagttttatataatcgtttatcat 251  Q
    ||||| |||| ||||||||| ||| |||| |||||||||||||| | ||| |||  ||||||||||||||| |||||| ||||||||||||    
T  22970772 tttacgtttcttttttaaattacaaactacataacatgtttttctagaataaatcaaagtgtgattgaagtattatatgatcgtttatcat 22970682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 4437658 - 4437532
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgat 225  Q
    |||||||||| |||||||||||||||||||||| |||| | ||||  ||||||||| | | || || ||| |||||||| |||| ||| | ||||||  |    
T  4437658 agggtgtgtttggattgaaggtttaggaggggagggttcatttttattttttaaattaaaaacaatgtaaaatgttttt-aaaaataaatcaagtgtttt 4437560  T
Q  226 tgaagttttatataatcgtttatcatgt 253  Q
    |||||| |||||| |||  |||||||||    
T  4437559 tgaagtattatatgatcaattatcatgt 4437532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 34111041 - 34110983
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||||||||  ||| || |||||||||||||| ||||||||||| ||||||||||    
T  34111041 ctaagggtgtgtttagatggagggtttaggaggggagggtttactttttatttttaaat 34110983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 46007715 - 46007764
Alignment:
Q  132 tgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||| |||| || |||||||||||||| ||||||||||||||||||||||    
T  46007715 tgtttggatggagggtttaggaggggagggtttacttttcatttttaaat 46007764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 56135965 - 56135910
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||||| |||| || |||||||||||||| || ||||||||| |||||||||    
T  56135965 agggtgtgtttggatggagggtttaggaggggagggcttacttttcttttttaaat 56135910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 23813148 - 23813234
Alignment:
Q  163 ttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    |||||||||||| |||||| || |||  ||||| |||||||| |||||||| | |||||| ||||||||  ||||| ||| ||||||    
T  23813148 ttacttttcattgttaaattacggacactataaaatgtttttgaaaattaaataaagtgttattgaagtactatatgatcatttatc 23813234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 49735465 - 49735503
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  49735465 ctaagggtgtgtttggattgagggtttaggaggggaagg 49735503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 55510217 - 55510307
Alignment:
Q  163 ttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgt 253  Q
    ||||||||||||||||| | | |||| || ||| ||||||||  ||| ||| |||||||||| |||||| |||||| ||| || |||||||    
T  55510217 ttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaagtgtgactgaagtattatatgatcattcatcatgt 55510307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 56135746 - 56135784
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  56135746 ctaagggtgtgtttggattgagggtttaggaggggaagg 56135784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 17182495 - 17182548
Alignment:
Q  128 ggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||| |||| || | |||||||||||||| |||||||||| |||||||||    
T  17182495 ggtgtgtttggatagaggttttaggaggggaagatttacttttcttttttaaat 17182548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 54935065 - 54935102
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  54935065 taagggtgtgtttggattgagggtttaggaggggaagg 54935102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 16530 - 16368
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgat 225  Q
    |||||||||| | |||||  |||| | |||||| |||||||||||| ||||||| | || ||||||||||||||||| || ||| ||| |||||||||||    
T  16530 agggtgtgtttgaattgagagtttggaaggggagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgat 16431  T
Q  226 tgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||| |||||| || ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  16430 tgaagtattatatgattgtttatcatgttaatatgttaacgttttataaaacatttcatagtg 16368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 39399 - 39259
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgatt---gaagttttatataatcgttta 247  Q
    |||||||| |||||||||||| ||||||||| || |||||| ||||||||||||| ||| ||| ||||||||||||   ||||| |||||| ||| ||||    
T  39399 ggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaagtgtgattgaagaagtattatatgatcattta 39300  T
Q  248 tcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  39299 tcatgttaatatgttaactttttaaaaaacatttcatagtg 39259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 126 - 285
Target Start/End: Original strand, 1300629 - 1300789
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgttttt--caaaattaatttaagtgtg 223  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||   ||||||||| || || |||||||||| |||||  ||| || |||| |||||||    
T  1300629 agggtgtgtttggattgagggtttaggaggggagggtttactttatgtttttaaattacggattatataacatatttttttcaagataaatt-aagtgtg 1300727  T
Q  224 attgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcata 285  Q
    |||||||| |||||| || |||||||| || ||||||||||||||||| |||| ||||||||    
T  1300728 attgaagtattatatgattgtttatcaggttaatatgttaactttttataaaatatttcata 1300789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 4097722 - 4097584
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgttttt-caaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    |||||| | |||| ||||||| ||||||||| || ||| ||||||||| ||||| | ||| ||| ||||||||||||||||| |||||| ||||||||||    
T  4097722 ggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaataaattaagtgtgattgaagtattatatgatcgtttatc 4097623  T
Q  250 atgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||| ||||||||||||||||| ||||||||||| ||||    
T  4097622 atgttaatatgttaactttttaaaaaacatttcaaagtg 4097584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 33235986 - 33236122
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||| |||| ||||||||||| ||||||||| || |||||||||||||||||||| ||| ||| |||||  |||||||||  |||||| || ||||||||    
T  33235986 ggagtggaaagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagactgattgaagaattatatgattgtttatca 33236085  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||||||||||||||| |||| |||||||||||    
T  33236086 tgttaatatgttaacttttta-aaaaaatttcatagtg 33236122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 176 - 288
Target Start/End: Complemental strand, 5585486 - 5585374
Alignment:
Q  176 ttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaa 275  Q
    |||||| || |||||||||||||||||||| ||| ||| ||||||||||||||| | || ||||||||||||| |||| ||||||||| ||||||| |||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaa 5585387  T
Q  276 acatttcatagtg 288  Q
    |||||||||||||    
T  5585386 acatttcatagtg 5585374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 21607043 - 21606917
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    |||||| |||| ||||||||| ||| ||||||| | ||||||||| ||| ||| | |||||||| |||||| |||||  |||||||||||||| ||||||    
T  21607043 gtttacatttcgtttttaaattacaaactatattatatgtttttctaaaataaataaagtgtgactgaagtattatacgatcgtttatcatgttaatatg 21606944  T
Q  261 ttaactttttagaaaacatttcatagt 287  Q
    ||||||||||| |||||||||||||||    
T  21606943 ttaactttttataaaacatttcatagt 21606917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 31849145 - 31849282
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||| ||||| ||||||||  |||||||||||||||| |||||| ||| ||| | ||||||||||||||| |||||| || ||||||||    
T  31849145 ggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaataaatcaagtgtgattgaagtattatattattgtttatca 31849244  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
     || |||||||||| |||||| || |||||| ||||||    
T  31849245 cgttaatatgttaattttttaaaagacattttatagtg 31849282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 13583777 - 13583891
Alignment:
Q  174 ttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttaga 273  Q
    |||||||| ||||| ||||||||||||||||| ||| ||| ||||||||||||||| | |||||| ||| ||||| |||| || ||||||| |||||| |    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaa 13583876  T
Q  274 aaacatttcatagtg 288  Q
    |||||||||||||||    
T  13583877 aaacatttcatagtg 13583891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 151 - 285
Target Start/End: Complemental strand, 30487514 - 30487380
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||| ||| |||||| ||||  ||||||||  || |||||||||||||||||||  ||| ||| | ||||||||||||||| |||||| || ||||||||    
T  30487514 ggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatattattgtttatca 30487415  T
Q  251 tgtgaatatgttaactttttagaaaacatttcata 285  Q
    ||| |||||||| |||||||| || ||||||||||    
T  30487414 tgttaatatgttgactttttaaaagacatttcata 30487380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 9719230 - 9719103
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    |||||| ||||| |||||||||  | |||||||||||||| |||| ||| | |||||| ||||||||||||| |||||| || ||||||||  | |||||    
T  9719230 ggtttaattttcttttttaaattccggactatataacatgctttttaaattaaattta-gtgtgattgaagtattatatgattgtttatcaaattaatat 9719132  T
Q  260 gttaactttttagaaaacatttcatagtg 288  Q
    |||||||||||| |||||||| |||||||    
T  9719131 gttaactttttaaaaaacattccatagtg 9719103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 287
Target Start/End: Complemental strand, 16738206 - 16738069
Alignment:
Q  150 aggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatc 249  Q
    |||||||||  ||||||||||| ||||||||| ||||| ||||||| ||||||||| ||| |||  ||||||| ||| |||| |||||| ||||| ||||    
T  16738206 aggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaagtaagtgttatttaagtattatatgatcgtatatc 16738107  T
Q  250 atgtgaatatgttaactttttagaaaacatttcatagt 287  Q
    |||| | ||| |||| || | | |||||||||||||||    
T  16738106 atgttattattttaatttatcaaaaaacatttcatagt 16738069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 9721337 - 9721210
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatat 259  Q
    |||||| ||||| |||||||||  | ||| ||||||||||||||| ||| | || ||| ||||||||||||| |||||| || ||||||||  | |||||    
T  9721337 ggtttaattttcttttttaaattccggaccatataacatgttttttaaattaaagtta-gtgtgattgaagtattatatgattgtttatcaaattaatat 9721239  T
Q  260 gttaactttttagaaaacatttcatagtg 288  Q
    |||||||||||| |||||||| |||||||    
T  9721238 gttaactttttaaaaaacattccatagtg 9721210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 19278246 - 19278139
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||| ||||| ||||||||| || |||||||||||||||||||| ||| ||| || ||| |||||||||| | |||| |||||||||||    
T  19278246 ggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaatttagtctgattgaagtatcatatgatcgtttatca 19278148  T
Q  251 tgtgaatat 259  Q
    ||| |||||    
T  19278147 tgttaatat 19278139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 287
Target Start/End: Original strand, 33041516 - 33041633
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||| ||||||||||||||| | |||||||||||  |||||||  ||| ||| ||||||||||||||||| ||||        ||||||||| |||||||    
T  33041516 tttatttttcatttttaaattatagactatataatgtgtttttttaaaataaattaagtgtgattgaagtgttat--------ttatcatgttaatatgt 33041607  T
Q  262 taactttttagaaaacatttcatagt 287  Q
    |||||||||| |||||||||||||||    
T  33041608 taactttttaaaaaacatttcatagt 33041633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 2893675 - 2893752
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatat 238  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||| ||| ||| |||||||||||||| || ||||||    
T  2893675 gtttacttttcgtttttaaactacagactatataacatgtttttctaaaataaattaagtgtgattgatgtattatat 2893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 285
Target Start/End: Complemental strand, 10348986 - 10348873
Alignment:
Q  173 tttttaaataacagactatataacatgtttttca-aaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaacttttta 271  Q
    ||||||||| || |||||||||||||||||||   ||| ||||| ||||| ||||||||| |||||| |||||||||| | | |||||||||||||||||    
T  10348986 tttttaaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaacttttta 10348887  T
Q  272 gaaaacatttcata 285  Q
     || | ||||||||    
T  10348886 aaagatatttcata 10348873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 25741477 - 25741562
Alignment:
Q  186 gactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaacttttta 271  Q
    |||||||||||||||||||  ||| ||| ||||| |||| ||||||||||||| |||||||||||| | | |||||||||||||||    
T  25741477 gactatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattattatgttaacttttta 25741562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 1390365 - 1390491
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgttt-ttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    |||| ||||| |||| |||| || |||||| |||||||||| ||| ||| ||| |||||| |||||||| | |||| | ||| |||||||||| ||||||    
T  1390365 tttaattttctttttaaaattacggactatgtaacatgtttattctaaaataaattaagtttgattgaaatattat-tgatcatttatcatgttaatatg 1390463  T
Q  261 ttaactttttagaaaacatttcatagtg 288  Q
    ||||||||||| |||| |||||||||||    
T  1390464 ttaactttttaaaaaatatttcatagtg 1390491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 288
Target Start/End: Original strand, 34176408 - 34176507
Alignment:
Q  189 tatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||||||||||||||| ||| ||| | ||||||||||| ||| |||||  ||||||||| |||| ||||||||||||||  | |||| |||||||||||    
T  34176408 tatataacatgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaatatttcatagtg 34176507  T

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Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 2892801 - 2892676
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgt 261  Q
    |||||||||| ||||||||  || |||||||||||| ||||||| ||| ||| || |||||||||||| | |||||| || ||||||||||| | ||| |    
T  2892801 tttacttttcttttttaaactacggactatataacacgtttttctaaaataaatttagtgtgattgaaatattatatgattgtttatcatgttattattt 2892702  T
Q  262 taactttttagaaaacatttcatagtg 288  Q
    ||| |||||| |||| || ||||||||    
T  2892701 taa-tttttaaaaaatatctcatagtg 2892676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 6034270 - 6034200
Alignment:
Q  162 tttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagtt 232  Q
    |||||||||| |||||||||  |||||| ||||||||||||||| ||| ||| ||||||||||||||||||    
T  6034270 tttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattgaagtt 6034200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 8471720 - 8471662
Alignment:
Q  294 atataaggcttcaataccactcagtcaggccgcaaatcctgaagcagat-ttctacttg 351  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  8471720 atataaggcctcaataccactcagtcaggctgcaaatcctgaagcagatgttctacttg 8471662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 10818314 - 10818388
Alignment:
Q  214 tttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||||| |||||||||||| |||||| ||| |||||||||| ||||||||||  ||||| ||||||||||||||||    
T  10818314 tttaaatgtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtg 10818388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 21606851 - 21606909
Alignment:
Q  123 ctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    ||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||    
T  21606851 ctaagggtgtgtttggatggagggtttaggaggggagggtttacttttcatttttaaat 21606909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 12811188 - 12811109
Alignment:
Q  152 gaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagt 231  Q
    ||||||| || ||||||||| | ||||||| | ||||||||||| ||||||||| ||| ||| |||||||||||||||||    
T  12811188 gaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataaattaagtgtgattgaagt 12811109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 14515508 - 14515643
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||  ||||| ||||||||| || ||||| ||||  ||||| || ||| ||| |||||||||| |||||| |||||| ||| |||||||    
T  14515508 ggaggggagggtttgtttttcttttttaaattacggactagataa--tgtttctctaaaataaattaagtgtgaatgaagtattatattatcatttatca 14515605  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||  ||||||||||| || | |||| |||| ||||||    
T  14515606 tgttcatatgttaactcttcaaaaaatattttatagtg 14515643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 2900017 - 2900082
Alignment:
Q  223 gattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||| || |||||| || ||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  2900017 gattgatgtattatatgattgtttatcatgttaatatgttaacttcttataaaacatttcatagtg 2900082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 2893046 - 2892915
Alignment:
Q  160 ggtttacttttcatttttaaataacagactatataacatgt--ttttcaaaattaattta-agtgtgattgaagttttatataatcgtttatcatgtgaa 256  Q
    |||||||||||| ||||||||| ||  ||||||||| || |  ||||  |||| |||||| |||||||||||||| |||||| |||||||||||||| |     
T  2893046 ggtttacttttcttttttaaattacgaactatataaaatatatttttttaaataaatttatagtgtgattgaagtattatatgatcgtttatcatgttat 2892947  T
Q  257 tatgttaactttttagaaaacatttcatagtg 288  Q
    ||| |||  || ||| |||| |||||||||||    
T  2892946 tattttactttcttacaaaatatttcatagtg 2892915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 1395691 - 1395800
Alignment:
Q  172 atttttaaataacagactatataacatgtttttca-aaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaacttttt 270  Q
    |||||| ||| || |||||| |||||||||||| | ||| ||| ||||||||||||||| |  || || ||| |||||||||  |||||||||| |||||    
T  1395691 attttttaattacggactatgtaacatgttttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaatttttt 1395790  T
Q  271 agaaaacatt 280  Q
    | ||||||||    
T  1395791 aaaaaacatt 1395800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 9721136 - 9721173
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9721136 taagggtgtgtttggattgaaggtttaggaggggaagg 9721173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 23090993 - 23091030
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||||| |||||||||||||||||||||||||    
T  23090993 taagggtgtgtttggattgaaggtttaggaggggaagg 23091030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 25747402 - 25747489
Alignment:
Q  185 agactatataacatgtttttc--aaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaacttttta 271  Q
    ||||||||||||||||||||   ||||| |||| ||  |||| ||||||||||||| |||||||||||||| | ||| |||||||||||    
T  25747402 agactatataacatgttttttttaaaatcaattaaac-gtgactgaagttttatatgatcgtttatcatgttattatattaacttttta 25747489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 4097231 - 4097270
Alignment:
Q  122 tctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  4097231 tctaagggtgtgtttggattgagggtttaggaggggaagg 4097270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 14515469 - 14515508
Alignment:
Q  122 tctaagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  14515469 tctaagggtgtgtttggattgagggtttaggaggggaagg 14515508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 2900150 - 2900089
Alignment:
Q  119 ttttctaagggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||| ||||| |||| | |||| || |||||||||||||| ||||||||||||||||||||||    
T  2900150 ttttttaaggatgtgcttggatggagggtttaggagggga-ggtttacttttcatttttaaat 2900089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 10818227 - 10818264
Alignment:
Q  124 taagggtgtgttaggattgaaggtttaggaggggaagg 161  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  10818227 taagggtgtgtttggattgagggtttaggaggggaagg 10818264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 33041694 - 33041641
Alignment:
Q  128 ggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||| |||| ||| ||||||||||||||| |||| |||| ||||||||||    
T  33041694 ggtgtgtttggatggaaagtttaggaggggaagatttattttttatttttaaat 33041641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 161 - 285
Target Start/End: Original strand, 15995 - 16119
Alignment:
Q  161 gtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatg 260  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||  |||  || ||| ||||||||||||| || |||||| |||| |||| | ||||||    
T  15995 gtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtattttataattgtttttcatattaatatg 16094  T
Q  261 ttaactttttagaaaacatttcata 285  Q
    ||||||||||| |||||||||||||    
T  16095 ttaactttttaaaaaacatttcata 16119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 151 - 288
Target Start/End: Original strand, 6619 - 6755
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatca 250  Q
    |||||||| |||||||||||| ||||||||| |||||||||||||| |||| ||| ||| ||| || |||||||||||||| |||||| ||||||||| |    
T  6619 ggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaatttagtgtgattgaagtattatatgatcgtttat-a 6717  T
Q  251 tgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    ||| ||||| |||| |||||  |||| |||||||||||    
T  6718 tgttaatattttaatttttttaaaaatatttcatagtg 6755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 152 - 288
Target Start/End: Original strand, 1208 - 1344
Alignment:
Q  152 gaggggaaggtttacttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatata----atcgttta 247  Q
    |||||||  ||||||||||| ||||||||| || |||||| ||||||||| ||| ||| |    ||||| ||| |||||| |||||||    ||||||||    
T  1208 gaggggagagtttacttttcttttttaaattacggactatgtaacatgttattctaaaat----taagtatgactgaagtattatatatatgatcgttta 1303  T
Q  248 tcatgtgaatatgttaactttttagaaaacatttcatagtg 288  Q
    |||||  ||||||||||||||||| ||||||||||||||||    
T  1304 tcatgacaatatgttaactttttaaaaaacatttcatagtg 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 181
Target Start/End: Complemental strand, 1381 - 1351
Alignment:
Q  151 ggaggggaaggtttacttttcatttttaaat 181  Q
    |||||||||||||||||||||||||||||||    
T  1381 ggaggggaaggtttacttttcatttttaaat 1351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 288
Target Start/End: Original strand, 18821 - 18941
Alignment:
Q  167 ttttcatttttaaataacagactatataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaact 266  Q
    ||||| ||||||||| |||||||||||||||||| |||| ||| ||| ||| |||| |||||| | |||||| ||| |||||||||| ||||| ||||||    
T  18821 ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcatgttaatatattaact 18919  T
Q  267 ttttagaaaacatttcatagtg 288  Q
    | ||| |||| | |||||||||    
T  18920 tcttaaaaaatagttcatagtg 18941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 15339 - 15427
Alignment:
Q  192 ataacatgtttttcaaaattaatttaagtgtgattgaagttttatataatcgtttatcatgtgaatatgttaactttttagaaaacatt 280  Q
    |||||||||||||| ||| ||| ||||||||| ||||||| |||||| || |||||||| || |||||||| || ||||| ||||||||    
T  15339 ataacatgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgttgaccttttaaaaaacatt 15427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 184611 - 184689
Alignment:
Q  126 agggtgtgttaggattgaaggtttaggaggggaaggtttacttttcatttttaaataacagactatataacatgttttt 204  Q
    |||||||||| ||||||| |||||||||||||| |||| ||||||  ||||||||| |   ||||||||| ||||||||    
T  184611 agggtgtgtttggattgagggtttaggaggggagggttcacttttattttttaaattatgaactatataaaatgttttt 184689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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