View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18072_high_22 (Length: 219)
Name: NF18072_high_22
Description: NF18072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18072_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 31009189 - 31009372
Alignment:
| Q |
20 |
gtagaaacaacctcatcacaactacacacccctcttctttctgaccaaccccctctgtcctcaaaatccaaaacctttgcaaacctcttcattgcaattg |
119 |
Q |
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| T |
31009189 |
gtagaaacaacctcatcacaactacacacccctcttctttctgaccaaccccctctgtcctcaaaatccaaaacctttgcaaacctcttcattgcaattg |
31009288 |
T |
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| Q |
120 |
taggtgcaggtgttcttggtctcccttatactttcacgaaaacaggttggattatggggttgcttatgcttttctctgtttcat |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
31009289 |
taggtgcaggtgttcttggtctcccttatactttcacgaaaacaggttggatcatggggttgcttatgcttttctctgtttcat |
31009372 |
T |
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