View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18072_high_24 (Length: 211)
Name: NF18072_high_24
Description: NF18072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18072_high_24 |
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Alignment Details
Target: chr3 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 28852260 - 28852384
Alignment:
| Q |
20 |
gatggatacatcatattcaactttccttgaatcgtccctaatatacagactaatactttgcaaagtgacatcaagtgaatccatgcgtgaattgaaatat |
119 |
Q |
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| T |
28852260 |
gatggatacatcatattcaactttccttgaatcgtccctaatatacagactaatactttgcaaagtgacatcaagtgaatccatgcgtgaattgaaatat |
28852359 |
T |
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| Q |
120 |
gcattagttagacgcaatgtgcatg |
144 |
Q |
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| T |
28852360 |
gcattagttagacgcaatgcgcatg |
28852384 |
T |
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