View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18074_high_7 (Length: 237)
Name: NF18074_high_7
Description: NF18074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18074_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 25824967 - 25824747
Alignment:
| Q |
1 |
atcacagtgcgccgactggattttaatcatacgctacactaagtataatcatggtgtcactgcgactttgtaaaattcagtgtcatttcaaacatgcact |
100 |
Q |
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||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
25824967 |
atcacagtgtgccgatcggattttaatcatacgctaaactaagtataatcatggtgtcactgcgattttgtaaaattcagtgtcatttcaaacatgcact |
25824868 |
T |
|
| Q |
101 |
aagtatagtctttatcaaacgaggctgatccaacctcaattgcaatcacattgcaatcggaaagacataaaaaatcttaatgtcgtggactagattgccg |
200 |
Q |
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||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25824867 |
aagcatagtctttatcaaatgaggctgatccaacctcaattgcaatcacattgcgatcggaaagacataaaaaatcttaatgtcgtggactagattgccg |
25824768 |
T |
|
| Q |
201 |
caacagaccttatcttataac |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
25824767 |
caacagaccttatcttataac |
25824747 |
T |
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