View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18074_low_7 (Length: 309)
Name: NF18074_low_7
Description: NF18074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18074_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 48839539 - 48839812
Alignment:
| Q |
20 |
gataagggttgttcggtgatttgttttctgcatataagaacaattagctagtagaacctctactcatgaaactctattgacgattgaggggaaggagttg |
119 |
Q |
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| T |
48839539 |
gataagggttgttcggtgatttgttttctgcatataagaacaattagctagtagaacctctactcatggaactctattgacgattgaggggaaggagttg |
48839638 |
T |
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| Q |
120 |
tattttaacgtttcatatttgtgttttggtttcctctagtttgagaacttatcgctgcttttaagtatcagactatttcaagttctccatttaaaagcga |
219 |
Q |
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| T |
48839639 |
tattttaacgtttcatatttgtgttttggtttcctctagtttgagaacttatcactgcttttaagtatcagactatttcaagttctccatttaaaagcga |
48839738 |
T |
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| Q |
220 |
taagataaacagtcatgaataaaaggccaagaggaaacatcaggctaagcaagggtgcatggcctagtttggat |
293 |
Q |
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| T |
48839739 |
taagataaacagtcatgaataaaaggccaagaggaaacatcaggctaagcaagggtgcatggcctagtttggat |
48839812 |
T |
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