View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18075_low_15 (Length: 224)
Name: NF18075_low_15
Description: NF18075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18075_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 31607526 - 31607743
Alignment:
| Q |
1 |
acttttgaggattctctatggtccttatgggtctggcttattgtatagttattttgatgataatataggtcaagggatcaagcaaatgtggtaccaatta |
100 |
Q |
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| T |
31607526 |
acttttgaggattctctatggtccttatgggtctggcttattgtatagttattttgatgataatataggtcaaggaatcaagcaaatgtggtaccaatta |
31607625 |
T |
|
| Q |
101 |
ttaggagcagtttttattactatttggaatgttgttattactagtctgatttgtattcttttaaatcgctttgtgaatcttcgaatgcaagaagaagagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
31607626 |
ttaggagcagtttttattactatttggaatgttgttattactagtctgatttgtattcttttaaatcgctttgtgaatcttcgaatgcaagaagaagacc |
31607725 |
T |
|
| Q |
201 |
ttgaggttggtgatgatg |
218 |
Q |
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|||||||||||||||||| |
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| T |
31607726 |
ttgaggttggtgatgatg |
31607743 |
T |
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