View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18076_high_6 (Length: 328)

Name: NF18076_high_6
Description: NF18076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18076_high_6
NF18076_high_6
[»] chr3 (13 HSPs)
chr3 (45-262)||(34897722-34897940)
chr3 (240-328)||(1995485-1995573)
chr3 (251-325)||(52859272-52859346)
chr3 (2-51)||(34899926-34899975)
chr3 (258-325)||(44637986-44638052)
chr3 (255-328)||(10474400-10474472)
chr3 (255-324)||(30235416-30235484)
chr3 (292-325)||(33632866-33632899)
chr3 (257-325)||(29586380-29586447)
chr3 (257-324)||(24754702-24754769)
chr3 (257-324)||(24763699-24763766)
chr3 (257-322)||(51982549-51982613)
chr3 (262-326)||(47750274-47750337)
[»] chr6 (7 HSPs)
chr6 (249-325)||(2800566-2800642)
chr6 (249-325)||(7215807-7215883)
chr6 (257-325)||(17828532-17828599)
chr6 (250-292)||(9952993-9953035)
chr6 (248-324)||(4804493-4804569)
chr6 (259-317)||(23936305-23936365)
chr6 (258-314)||(29229149-29229204)
[»] chr1 (11 HSPs)
chr1 (249-325)||(39426254-39426330)
chr1 (251-325)||(35534741-35534813)
chr1 (248-321)||(32887735-32887807)
chr1 (253-325)||(26860010-26860081)
chr1 (257-323)||(26372298-26372362)
chr1 (257-324)||(50294026-50294093)
chr1 (258-312)||(49384627-49384680)
chr1 (250-314)||(1228496-1228560)
chr1 (248-324)||(12380831-12380907)
chr1 (248-324)||(12384898-12384974)
chr1 (250-314)||(18976260-18976324)
[»] chr8 (6 HSPs)
chr8 (251-325)||(42761757-42761831)
chr8 (248-327)||(21360318-21360400)
chr8 (255-325)||(42338008-42338077)
chr8 (246-312)||(20169125-20169190)
chr8 (292-325)||(17520426-17520459)
chr8 (247-324)||(37966397-37966473)
[»] chr2 (14 HSPs)
chr2 (250-325)||(4446852-4446927)
chr2 (250-325)||(30217517-30217592)
chr2 (251-325)||(30709154-30709228)
chr2 (249-319)||(30721564-30721632)
chr2 (248-325)||(19908824-19908899)
chr2 (250-324)||(2063399-2063472)
chr2 (249-325)||(31618724-31618798)
chr2 (257-323)||(22061433-22061498)
chr2 (292-328)||(35315286-35315322)
chr2 (274-322)||(36929763-36929810)
chr2 (253-328)||(30857638-30857712)
chr2 (291-325)||(34512022-34512056)
chr2 (251-300)||(6946335-6946384)
chr2 (292-324)||(19905926-19905958)
[»] chr7 (9 HSPs)
chr7 (250-327)||(47270592-47270668)
chr7 (288-325)||(29844335-29844372)
chr7 (257-325)||(4888511-4888579)
chr7 (257-325)||(5463867-5463934)
chr7 (257-324)||(44648009-44648076)
chr7 (246-312)||(44390835-44390900)
chr7 (249-314)||(33450562-33450627)
chr7 (279-323)||(18064601-18064643)
chr7 (252-328)||(40023215-40023290)
[»] chr4 (13 HSPs)
chr4 (249-320)||(15178628-15178699)
chr4 (252-321)||(36532673-36532741)
chr4 (255-320)||(33841766-33841830)
chr4 (258-314)||(5815267-5815322)
chr4 (257-324)||(23610687-23610754)
chr4 (254-323)||(42844148-42844216)
chr4 (253-325)||(1871321-1871392)
chr4 (257-324)||(19901881-19901948)
chr4 (257-324)||(39862562-39862629)
chr4 (291-328)||(5817976-5818013)
chr4 (250-322)||(56453777-56453848)
chr4 (292-324)||(23474156-23474188)
chr4 (248-324)||(56558324-56558400)
[»] chr5 (7 HSPs)
chr5 (257-325)||(29341039-29341106)
chr5 (255-321)||(9460597-9460662)
chr5 (257-325)||(43309152-43309220)
chr5 (257-324)||(11775838-11775905)
chr5 (250-284)||(21213953-21213987)
chr5 (292-325)||(31653079-31653112)
chr5 (293-321)||(2984389-2984417)


Alignment Details
Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 45 - 262
Target Start/End: Original strand, 34897722 - 34897940
Alignment:
Q  45 atataaaaaccctctctccatttcttaaatgttgtagaaatggacaaatcagctgatnnnnnnnn-tagaagtggacatcttcaataccgttttgttcgg 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  34897722 atataaaaaccctctctccatttcttaaatgttgtagaaatggacaaatcagctgataaaaaaaaatagaagtggacatcttcaataccgttttgttcgg 34897821  T
Q  144 tagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgttggaatccaagtcaacatgtaatagaggtggg 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  34897822 tagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgtcggaatccaagtcaacatgtaattgaggtggg 34897921  T
Q  244 tgagaggggttaggatcct 262  Q
    |||||||||||||||||||    
T  34897922 tgagaggggttaggatcct 34897940  T

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Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 240 - 328
Target Start/End: Complemental strand, 1995573 - 1995485
Alignment:
Q  240 tgggtgagaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatg 328  Q
    ||||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| | |||||||||||||    
T  1995573 tgggtgacatgggttaggatcctcttcattttatcaaataaatggaagtacacaatttgaagagagatagacatagaaaatagataatg 1995485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 52859346 - 52859272
Alignment:
Q  251 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    ||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  52859346 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttagagagagatagacacataaaatagata 52859272  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 34899975 - 34899926
Alignment:
Q  2 atctcaacttgaaagttgaaactaccaaactttacctatatgcatataaa 51  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34899975 atctcaacttgaaagttgaaactaccaaactttacctatatgcatataaa 34899926  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 44638052 - 44637986
Alignment:
Q  258 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||| |||||||| |||||||||||| |||  |||||| |||||||||| ||||||||||||||||    
T  44638052 atcctcatcatttgacaaaataaatgga-gtatgcaattttgagagagataaacacataaaatagata 44637986  T

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Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 10474400 - 10474472
Alignment:
Q  255 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatg 328  Q
    ||||||||||  |||||| | |||||||||| |||  |||||| |||||| |||||||||||||||||||||||    
T  10474400 aggatcctctctatttgacataataaatgga-gtatgcaattttgagagatatagacacataaaatagataatg 10474472  T

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Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 30235416 - 30235484
Alignment:
Q  255 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||| |||||||||| |||||||||||| ||||  ||||||| ||||||||||||| | |||||||||    
T  30235416 aggatcatcttcatttgttaaaataaatgg-agtatgcaatttgaagagagatagacataaaaaatagat 30235484  T

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Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 33632899 - 33632866
Alignment:
Q  292 caatttggagagagatagacacataaaatagata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  33632899 caatttggagagagatagacacataaaatagata 33632866  T

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Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 29586447 - 29586380
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    ||||||||||||||   | |||||||||| |||  || |||||||||||||||||||||||||||||||    
T  29586447 gatcctcttcatttagcataataaatgga-gtatgcagtttggagagagatagacacataaaatagata 29586380  T

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Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 24754769 - 24754702
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||    
T  24754769 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagat 24754702  T

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Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 24763766 - 24763699
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||    
T  24763766 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagat 24763699  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 51982549 - 51982613
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatag 322  Q
    |||||||| |||||   |||||||||||||| |  ||||||||||||||||||| |||||||||||    
T  51982549 gatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagatacataaaatag 51982613  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 47750274 - 47750337
Alignment:
Q  262 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataa 326  Q
    ||||||||||| |||||||||| | ||| |||||||| ||||| ||| ||||| |||||||||||    
T  47750274 tcttcatttgacaaaataaatg-aggtatacaatttgaagagacataaacacaaaaaatagataa 47750337  T

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Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 2800566 - 2800642
Alignment:
Q  249 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  2800566 ggggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagata 2800642  T

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Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 7215807 - 7215883
Alignment:
Q  249 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7215807 ggggttagtatcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagata 7215883  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 17828532 - 17828599
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||| |||||| || ||||| |||| |||  ||||||||||||||||||||||||||||||||||    
T  17828532 gatcctctacatttggtataataattgga-gtatgcaatttggagagagatagacacataaaatagata 17828599  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 9952993 - 9953035
Alignment:
Q  250 gggttaggatcctcttcatttgataaaataaatggaagtacac 292  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  9952993 gggttaagatcctctccatttgataaaataaatggaagtacac 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 4804569 - 4804493
Alignment:
Q  248 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||| | |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||    
T  4804569 aggggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagat 4804493  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 23936365 - 23936305
Alignment:
Q  259 tcctcttcatttgataaaataaatggaagtacacaatttg--gagagagatagacacataa 317  Q
    |||||| ||||||||||| | |||| |||||||||||| |  |||||||||||||||||||    
T  23936365 tcctctccatttgataaattgaatgaaagtacacaattcggagagagagatagacacataa 23936305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  258 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 314  Q
    ||||||| |||||| || |||||||||| |||  |||||||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacaca 29229149  T

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Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 39426330 - 39426254
Alignment:
Q  249 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39426330 ggggttagtatcatctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 39426254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 35534741 - 35534813
Alignment:
Q  251 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  35534741 ggttagtatcctctccatttgataaaataaatggaagtacacaattt--agagagatagacacataaaatagata 35534813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 32887735 - 32887807
Alignment:
Q  248 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 321  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  32887735 agggattaggatcctcttcatttgataaaataaatgg-agtacacagtttagagaaagatagacacataaaata 32887807  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 26860010 - 26860081
Alignment:
Q  253 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||| |||  ||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  26860010 ttaggatcatctctatttgataaaataaatgga-gtacataatttgaagagagatagacacataaaatagata 26860081  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 26372362 - 26372298
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 323  Q
    ||||||||  ||||||||||||||||||||||| | |||||  |||||||||||||| |||||||||    
T  26372362 gatcctctcaatttgataaaataaatggaagtagataattt--agagagatagacacgtaaaataga 26372298  T

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Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 50294026 - 50294093
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  50294026 gatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagat 50294093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 49384627 - 49384680
Alignment:
Q  258 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 312  Q
    ||||||| |||||| |||||||||||||| || ||||||| ||||||||||||||    
T  49384627 atcctctccatttgttaaaataaatggaa-tatacaatttagagagagatagaca 49384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 1228496 - 1228560
Alignment:
Q  250 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 314  Q
    |||||| ||||||||||||||  |||||||||||||  |   ||||||||||||||| |||||||    
T  1228496 gggttaagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacaca 1228560  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 12380831 - 12380907
Alignment:
Q  248 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12380831 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 12384898 - 12384974
Alignment:
Q  248 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12384898 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 18976260 - 18976324
Alignment:
Q  250 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 314  Q
    |||||| |||||||| |||||| |||||||||| ||  |   |||||||||||||||||||||||    
T  18976260 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacaca 18976324  T

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Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 42761831 - 42761757
Alignment:
Q  251 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  42761831 ggttaggatcctcttcacttaataaaataaatggaagtacgcaatttgaagagagatagacacataaaatagata 42761757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 21360400 - 21360318
Alignment:
Q  248 aggggttaggatcctcttcatttgataaaataaatggaag----tacacaatttggagagagatagacacataaaatagataat 327  Q
    ||||||||||||||||| ||||||||||||||||| ||||    |||| |||||||||||||||| |||||||| |||||||||    
T  21360400 aggggttaggatcctctccatttgataaaataaat-gaagtacatacataatttggagagagataaacacataatatagataat 21360318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 42338008 - 42338077
Alignment:
Q  255 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    ||||||||||||||||||||||||||||  ||||| | |||||||||||| ||| |||  |||||||||||    
T  42338008 aggatcctcttcatttgataaaataaat-taagtatataatttggagagatatatacatgtaaaatagata 42338077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 20169190 - 20169125
Alignment:
Q  246 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 312  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  20169190 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 20169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 17520459 - 17520426
Alignment:
Q  292 caatttggagagagatagacacataaaatagata 325  Q
    ||||||||||||| ||||||||||||||||||||    
T  17520459 caatttggagagatatagacacataaaatagata 17520426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 37966397 - 37966473
Alignment:
Q  247 gaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    ||||||||| |||||||| ||||||  ||||||||||||| |   ||||||| ||||||||| ||||| |||||||||    
T  37966397 gaggggttaagatcctctccatttggcaaaataaatggaa-tttgcaatttgaagagagataaacacaaaaaatagat 37966473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 4446852 - 4446927
Alignment:
Q  250 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  4446852 gggttagtatcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagata 4446927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 30217592 - 30217517
Alignment:
Q  250 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  30217592 gggttaggatcctctctatttgataaaataaatggaagcacacaatttagagtgagatagacacataaaatagata 30217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 30709228 - 30709154
Alignment:
Q  251 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||||||||| ||| | ||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  30709228 ggttaggatcctctccatcttataaaatcaatgaaagtacacaatttggagagagatagacacataaaatagata 30709154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 30721564 - 30721632
Alignment:
Q  249 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa 319  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  30721564 ggggttaagatccgctccatttgataaaataaatagaagtacacaatttg--gagagatagacacataaaa 30721632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 19908899 - 19908824
Alignment:
Q  248 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||| | |||||||||||||||||| ||||||||| ||||  |||||||||| |||||||||||||||||||||||    
T  19908899 aggggtaaagatcctcttcatttgatataataaatgg-agtatgcaatttggag-gagatagacacataaaatagata 19908824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 2063472 - 2063399
Alignment:
Q  250 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||| |||||||||||||||| ||||||||| || ||   ||||||||||||||||||||||| |||||||||    
T  2063472 gggttaagatcctcttcatttgacaaaataaataga-gtttgcaatttggagagagatagacacaaaaaatagat 2063399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 31618724 - 31618798
Alignment:
Q  249 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||||||||||| |||||||| ||| |||||| |||| |||||||||||| ||||||| | ||||||||||||    
T  31618724 ggggttaggatcctctccatttgat-aaagaaatgg-agtatacaatttggagaaagatagatatataaaatagata 31618798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 323  Q
    ||||||||  |||||| |||||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  22061433 gatcctctcaatttgacaaaataaatg-aagtatgcaatttgaagagagatagacacataaaataga 22061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 35315286 - 35315322
Alignment:
Q  292 caatttggagagagatagacacataaaatagataatg 328  Q
    ||||||| |||||||||||||||||||||||||||||    
T  35315286 caatttgaagagagatagacacataaaatagataatg 35315322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 36929810 - 36929763
Alignment:
Q  274 aaaataaatggaagtacacaatttggagagagatagacacataaaatag 322  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||    
T  36929810 aaaataaatgga-gtatgcaatttggagagagatagacacataaaatag 36929763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 30857638 - 30857712
Alignment:
Q  253 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatg 328  Q
    |||||||||||| ||||| | |||||||||||| |||   |||||| |||||| |||||||| |||||||||||||    
T  30857638 ttaggatcctctccatttcacaaaataaatgga-gtatgtaatttgaagagaggtagacacaaaaaatagataatg 30857712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 325
Target Start/End: Original strand, 34512022 - 34512056
Alignment:
Q  291 acaatttggagagagatagacacataaaatagata 325  Q
    |||||||||||| ||||||||||||||||||||||    
T  34512022 acaatttggagaaagatagacacataaaatagata 34512056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 6946384 - 6946335
Alignment:
Q  251 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttgga 300  Q
    |||||||||||||  |||||||||||||||||| || | |||||||||||    
T  6946384 ggttaggatcctccccatttgataaaataaatgaaaatgcacaatttgga 6946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 19905958 - 19905926
Alignment:
Q  292 caatttggagagagatagacacataaaatagat 324  Q
    |||||| ||||||||||||||||||||||||||    
T  19905958 caattttgagagagatagacacataaaatagat 19905926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 47270668 - 47270592
Alignment:
Q  250 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataat 327  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||||||| |||||||||||    
T  47270668 gggttaggatcctctctatttgataaaataaatggaattacacaatttagagatagatagacacat-aaatagataat 47270592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 29844372 - 29844335
Alignment:
Q  288 tacacaatttggagagagatagacacataaaatagata 325  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29844372 tacacaatttggagagagatagacacataaaatagata 29844335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 4888579 - 4888511
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| ||||||||||    
T  4888579 gatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagata 4888511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 5463867 - 5463934
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||| ||||||||| |||||||  | ||| |||||||||||||| ||| ||||||||||||||||    
T  5463867 gatcctctccatttgatataataaatata-gtatacaatttggagagatataaacacataaaatagata 5463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 44648076 - 44648009
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  44648076 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 44648009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 44390900 - 44390835
Alignment:
Q  246 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 312  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  44390900 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 44390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 33450627 - 33450562
Alignment:
Q  249 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 314  Q
    ||||||| |||||||| |||||| |||||||||| ||  |   |||||||||||||||||||||||    
T  33450627 ggggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacaca 33450562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 18064643 - 18064601
Alignment:
Q  279 aaatggaagtacacaatttggagagagatagacacataaaataga 323  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||    
T  18064643 aaatggaa-tacacaatt-ggagagagatagacacataaaataga 18064601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 40023215 - 40023290
Alignment:
Q  252 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatg 328  Q
    ||||| |||||||  |||||| ||||||||  || ||| |||||||||||| ||||||||| ||||||||| |||||    
T  40023215 gttagaatcctctctatttgaaaaaataaaacga-gtatacaatttggagaaagatagacatataaaatagttaatg 40023290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 249 - 320
Target Start/End: Original strand, 15178628 - 15178699
Alignment:
Q  249 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 320  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||    
T  15178628 ggggttaggattctctccatttgataaaatgaatggaagtacataatttgaagagagataaacacataaaat 15178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 36532741 - 36532673
Alignment:
Q  252 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 321  Q
    |||| |||||||| ||| |||||||||||||||| || |||||||| |||||||||||||||||||||||    
T  36532741 gttaagatcctctccatctgataaaataaatgga-gttcacaatttagagagagatagacacataaaata 36532673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 33841766 - 33841830
Alignment:
Q  255 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 320  Q
    |||||||||| |||||| |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  33841766 aggatcctctccatttgttaaagtaaatgga-gtatacaatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 5815267 - 5815322
Alignment:
Q  258 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 314  Q
    ||||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  5815267 atcctctccatttgataaaataaatgg-agtacaaaattttgagagagatagacaca 5815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 23610754 - 23610687
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||||| ||||||||||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  23610754 gatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 23610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 323
Target Start/End: Original strand, 42844148 - 42844216
Alignment:
Q  254 taggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 323  Q
    ||||||||||| ||| | ||||||||||| ||  || |||||||||||| ||||||||||||||||||||    
T  42844148 taggatcctctccatattataaaataaatagagtta-acaatttggagatagatagacacataaaataga 42844216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 1871392 - 1871321
Alignment:
Q  253 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    ||||||||||||  |||||| |||||||||||| |||  ||||||||||||||||||||| | || |||||||    
T  1871392 ttaggatcctctcaatttgacaaaataaatgga-gtatgcaatttggagagagatagacaaaaaatatagata 1871321  T

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Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 19901881 - 19901948
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  19901881 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 19901948  T

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Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 39862629 - 39862562
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||||| ||||||||||||||||| ||| |   ||| || |||||||||||||||| |||||||||    
T  39862629 gatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagat 39862562  T

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Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 5818013 - 5817976
Alignment:
Q  291 acaatttggagagagatagacacataaaatagataatg 328  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5818013 acaatttggagagagatagacacaaaaaagagataatg 5817976  T

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Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 56453777 - 56453848
Alignment:
Q  250 gggttaggatcctcttcatttgata-aaataaatggaagtacacaatttggagagagatagacacataaaatag 322  Q
    |||||| |||||||| ||||| ||| ||||||||||||| |  ||||||||||||||||||||||| |||||||    
T  56453777 gggttaagatcctctccattt-atagaaataaatggaag-atgcaatttggagagagatagacacaaaaaatag 56453848  T

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Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 23474188 - 23474156
Alignment:
Q  292 caatttggagagagatagacacataaaatagat 324  Q
    |||||||| ||||||||||||||||||||||||    
T  23474188 caatttggggagagatagacacataaaatagat 23474156  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 56558400 - 56558324
Alignment:
Q  248 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  56558400 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 56558324  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 29341106 - 29341039
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    |||||||| |||||| || |||||||||| |||  ||||||||||||||||||||||| ||||||||||    
T  29341106 gatcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacacagaaaatagata 29341039  T

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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 9460597 - 9460662
Alignment:
Q  255 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 321  Q
    |||||||||| |||||| |||||||||| || |||  ||||||||||||||||||||||||| ||||    
T  9460597 aggatcctctccatttggtaaaataaataga-gtatgcaatttggagagagatagacacatataata 9460662  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 43309220 - 43309152
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 325  Q
    ||||||||| |||||||||||||||||||  |   ||| ||||||||||||||||| | ||||||||||    
T  43309220 gatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagata 43309152  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 11775905 - 11775838
Alignment:
Q  257 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 324  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 11775838  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 21213987 - 21213953
Alignment:
Q  250 gggttaggatcctcttcatttgataaaataaatgg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  21213987 gggttaggatcctctccatttgataaaataaatgg 21213953  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 31653112 - 31653079
Alignment:
Q  292 caatttggagagagatagacacataaaatagata 325  Q
    ||||||||||||||||| ||||||||||||||||    
T  31653112 caatttggagagagataaacacataaaatagata 31653079  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 293 - 321
Target Start/End: Original strand, 2984389 - 2984417
Alignment:
Q  293 aatttggagagagatagacacataaaata 321  Q
    |||||||||||||||||||||||||||||    
T  2984389 aatttggagagagatagacacataaaata 2984417  T

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