View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18077_high_12 (Length: 484)

Name: NF18077_high_12
Description: NF18077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18077_high_12
NF18077_high_12
[»] chr3 (79 HSPs)
chr3 (1-220)||(19768084-19768303)
chr3 (4-170)||(29199652-29199815)
chr3 (3-152)||(12572312-12572461)
chr3 (3-152)||(13548776-13548925)
chr3 (324-440)||(43101378-43101494)
chr3 (256-316)||(34250508-34250568)
chr3 (324-442)||(44573620-44573738)
chr3 (324-442)||(54369020-54369138)
chr3 (298-442)||(24539108-24539253)
chr3 (351-466)||(39956654-39956770)
chr3 (351-442)||(22339749-22339840)
chr3 (351-442)||(50692534-50692625)
chr3 (324-442)||(44573307-44573425)
chr3 (341-442)||(3985771-3985872)
chr3 (344-441)||(14170005-14170102)
chr3 (341-442)||(21750473-21750574)
chr3 (341-441)||(34715461-34715561)
chr3 (351-442)||(9264505-9264596)
chr3 (351-442)||(49477542-49477633)
chr3 (351-442)||(50692331-50692422)
chr3 (351-442)||(51338446-51338537)
chr3 (324-442)||(4255491-4255609)
chr3 (324-442)||(4256215-4256333)
chr3 (324-442)||(13769296-13769414)
chr3 (341-435)||(27219327-27219421)
chr3 (324-442)||(50203862-50203980)
chr3 (345-442)||(9179135-9179232)
chr3 (373-442)||(44573966-44574035)
chr3 (342-442)||(10453708-10453808)
chr3 (370-442)||(39078776-39078848)
chr3 (351-442)||(9264091-9264182)
chr3 (351-442)||(9264298-9264389)
chr3 (351-442)||(22407653-22407744)
chr3 (351-442)||(39956472-39956563)
chr3 (351-442)||(51642640-51642731)
chr3 (351-444)||(33909633-33909724)
chr3 (324-442)||(45443261-45443379)
chr3 (351-441)||(53640178-53640268)
chr3 (345-442)||(10856631-10856728)
chr3 (345-442)||(11244546-11244643)
chr3 (351-444)||(44145124-44145217)
chr3 (345-442)||(48511644-48511741)
chr3 (256-316)||(662615-662674)
chr3 (260-304)||(13769460-13769504)
chr3 (382-442)||(22407446-22407506)
chr3 (370-442)||(35011891-35011963)
chr3 (370-442)||(49477354-49477426)
chr3 (386-442)||(50057072-50057128)
chr3 (370-442)||(51642433-51642505)
chr3 (351-442)||(4191127-4191218)
chr3 (351-442)||(37058776-37058867)
chr3 (383-442)||(38300288-38300347)
chr3 (383-442)||(38300757-38300816)
chr3 (383-441)||(34356848-34356906)
chr3 (382-444)||(39390978-39391040)
chr3 (371-441)||(40230645-40230715)
chr3 (324-442)||(41380705-41380822)
chr3 (372-442)||(44145400-44145469)
chr3 (341-411)||(47833698-47833768)
chr3 (341-411)||(48685353-48685423)
chr3 (259-304)||(4255400-4255445)
chr3 (260-316)||(14170155-14170212)
chr3 (345-442)||(24453780-24453877)
chr3 (260-316)||(27219220-27219277)
chr3 (381-442)||(33909838-33909899)
chr3 (351-440)||(35015493-35015582)
chr3 (351-444)||(35358456-35358549)
chr3 (260-316)||(45443171-45443228)
chr3 (260-316)||(54368930-54368987)
chr3 (351-444)||(54591468-54591561)
chr3 (260-304)||(4255761-4255805)
chr3 (370-442)||(11414390-11414462)
chr3 (351-442)||(25627925-25628017)
chr3 (352-400)||(32034100-32034148)
chr3 (341-441)||(33909334-33909434)
chr3 (351-403)||(34992585-34992637)
chr3 (351-403)||(34992877-34992929)
chr3 (351-466)||(37223583-37223699)
chr3 (373-445)||(44461069-44461141)
[»] chr6 (35 HSPs)
chr6 (1-220)||(22082777-22082996)
chr6 (324-442)||(10418343-10418461)
chr6 (341-442)||(31878-31979)
chr6 (341-442)||(8144015-8144116)
chr6 (351-444)||(15102627-15102721)
chr6 (324-442)||(19054474-19054592)
chr6 (324-442)||(24055114-24055232)
chr6 (324-437)||(30539216-30539329)
chr6 (351-442)||(15101116-15101207)
chr6 (351-442)||(16877015-16877106)
chr6 (324-442)||(10733443-10733561)
chr6 (352-442)||(28149802-28149892)
chr6 (373-442)||(1744847-1744916)
chr6 (353-442)||(11313387-11313476)
chr6 (351-444)||(16590192-16590285)
chr6 (351-444)||(16605095-16605188)
chr6 (260-316)||(1206020-1206076)
chr6 (261-357)||(11198912-11199008)
chr6 (351-442)||(24558591-24558682)
chr6 (370-444)||(5269276-5269350)
chr6 (342-444)||(23591528-23591630)
chr6 (341-442)||(19753609-19753710)
chr6 (346-442)||(8427553-8427649)
chr6 (261-357)||(11160331-11160427)
chr6 (370-442)||(16876835-16876907)
chr6 (370-442)||(24558815-24558887)
chr6 (260-304)||(30539126-30539170)
chr6 (371-442)||(11316871-11316942)
chr6 (384-466)||(17147885-17147968)
chr6 (383-442)||(27914331-27914390)
chr6 (324-442)||(12134488-12134606)
chr6 (373-442)||(11317078-11317147)
chr6 (373-442)||(19712614-19712683)
chr6 (398-443)||(20864511-20864556)
chr6 (371-439)||(15102760-15102828)
[»] chr4 (68 HSPs)
chr4 (1-220)||(37616984-37617198)
chr4 (324-442)||(990528-990646)
chr4 (324-442)||(45427257-45427375)
chr4 (324-444)||(991185-991305)
chr4 (341-441)||(29669684-29669784)
chr4 (324-442)||(15665134-15665252)
chr4 (324-442)||(45426941-45427059)
chr4 (324-442)||(53738213-53738331)
chr4 (324-442)||(53740163-53740281)
chr4 (341-442)||(29669368-29669469)
chr4 (341-442)||(51469479-51469580)
chr4 (323-442)||(34205998-34206118)
chr4 (351-442)||(25753610-25753701)
chr4 (324-442)||(43972336-43972454)
chr4 (324-442)||(52214596-52214714)
chr4 (341-442)||(27048413-27048514)
chr4 (323-442)||(34206260-34206380)
chr4 (324-442)||(50858309-50858424)
chr4 (351-442)||(5488375-5488466)
chr4 (351-442)||(12016688-12016779)
chr4 (351-442)||(12016896-12016987)
chr4 (351-442)||(43943681-43943772)
chr4 (372-439)||(52827240-52827307)
chr4 (352-442)||(29113458-29113548)
chr4 (351-444)||(8559974-8560067)
chr4 (324-429)||(22867065-22867170)
chr4 (341-442)||(36558471-36558572)
chr4 (341-442)||(48843022-48843123)
chr4 (345-442)||(51470485-51470582)
chr4 (377-444)||(9938483-9938550)
chr4 (383-442)||(21497688-21497747)
chr4 (383-442)||(21498227-21498286)
chr4 (345-452)||(37097726-37097833)
chr4 (381-444)||(53386115-53386178)
chr4 (372-442)||(23018499-23018569)
chr4 (380-442)||(27048142-27048204)
chr4 (324-442)||(50857993-50858111)
chr4 (324-442)||(56509590-56509708)
chr4 (380-441)||(28085731-28085792)
chr4 (260-361)||(33385178-33385279)
chr4 (372-441)||(33797115-33797184)
chr4 (382-442)||(33912082-33912142)
chr4 (370-466)||(49380861-49380957)
chr4 (260-304)||(51469377-51469421)
chr4 (370-442)||(56511324-56511396)
chr4 (372-439)||(3055812-3055879)
chr4 (351-442)||(27634331-27634422)
chr4 (383-442)||(28245828-28245887)
chr4 (341-440)||(29734559-29734658)
chr4 (383-442)||(41176746-41176805)
chr4 (324-442)||(13254364-13254482)
chr4 (351-405)||(28497256-28497310)
chr4 (324-442)||(53739847-53739965)
chr4 (260-316)||(990732-990789)
chr4 (345-442)||(11290171-11290268)
chr4 (385-442)||(32987476-32987533)
chr4 (370-411)||(56511531-56511572)
chr4 (384-432)||(7193711-7193759)
chr4 (416-444)||(7910352-7910380)
chr4 (260-304)||(13254295-13254339)
chr4 (357-441)||(20093346-20093430)
chr4 (260-308)||(26943035-26943083)
chr4 (382-442)||(28395216-28395276)
chr4 (382-442)||(46528928-46528988)
chr4 (260-304)||(48843186-48843230)
chr4 (351-439)||(50307284-50307372)
chr4 (260-304)||(52214506-52214550)
chr4 (260-304)||(53740073-53740117)
[»] chr7 (68 HSPs)
chr7 (260-442)||(37272050-37272232)
chr7 (260-442)||(43288181-43288363)
chr7 (372-442)||(44760512-44760582)
chr7 (334-442)||(29780138-29780246)
chr7 (324-442)||(28910013-28910131)
chr7 (341-442)||(1661196-1661297)
chr7 (341-442)||(1663609-1663711)
chr7 (324-442)||(7135248-7135366)
chr7 (345-442)||(27585258-27585355)
chr7 (345-442)||(39549983-39550080)
chr7 (345-442)||(43384285-43384382)
chr7 (351-442)||(39808602-39808693)
chr7 (324-442)||(257272-257390)
chr7 (258-316)||(3973050-3973108)
chr7 (351-444)||(9378801-9378894)
chr7 (345-442)||(47346099-47346196)
chr7 (370-442)||(6783065-6783137)
chr7 (370-442)||(43288559-43288631)
chr7 (345-444)||(34748780-34748879)
chr7 (351-442)||(35866644-35866735)
chr7 (341-452)||(37530918-37531029)
chr7 (351-441)||(5775890-5775980)
chr7 (341-411)||(31149055-31149125)
chr7 (341-411)||(31167347-31167417)
chr7 (382-444)||(31374804-31374866)
chr7 (342-444)||(36092602-36092704)
chr7 (372-438)||(36237831-36237897)
chr7 (384-442)||(36270702-36270760)
chr7 (351-444)||(23396822-23396915)
chr7 (372-437)||(36492553-36492618)
chr7 (324-441)||(40121624-40121741)
chr7 (345-438)||(41670585-41670678)
chr7 (382-442)||(14991514-14991574)
chr7 (382-442)||(15421125-15421185)
chr7 (351-411)||(16564902-16564962)
chr7 (351-411)||(16565106-16565166)
chr7 (351-411)||(16600496-16600556)
chr7 (351-411)||(16600700-16600760)
chr7 (258-316)||(7135399-7135458)
chr7 (260-307)||(21033975-21034022)
chr7 (370-441)||(34590555-34590626)
chr7 (343-442)||(36092397-36092496)
chr7 (372-463)||(40137681-40137771)
chr7 (383-442)||(40703416-40703475)
chr7 (351-442)||(40703657-40703748)
chr7 (258-316)||(43168049-43168108)
chr7 (262-316)||(12305212-12305266)
chr7 (351-441)||(40703865-40703955)
chr7 (260-316)||(257423-257480)
chr7 (259-304)||(28909922-28909967)
chr7 (345-442)||(33909139-33909236)
chr7 (345-442)||(36495891-36495988)
chr7 (324-441)||(43167899-43168016)
chr7 (382-439)||(43383954-43384011)
chr7 (345-442)||(47346328-47346425)
chr7 (370-442)||(4258005-4258077)
chr7 (351-403)||(8681892-8681944)
chr7 (380-432)||(14691109-14691161)
chr7 (345-445)||(19843709-19843809)
chr7 (370-442)||(23396636-23396708)
chr7 (260-316)||(23721035-23721091)
chr7 (370-442)||(29252603-29252675)
chr7 (6-54)||(32662990-32663038)
chr7 (382-442)||(33909345-33909405)
chr7 (260-308)||(35021729-35021777)
chr7 (370-442)||(39808469-39808541)
chr7 (260-304)||(40121787-40121831)
chr7 (353-405)||(47856033-47856085)
[»] chr8 (52 HSPs)
chr8 (260-442)||(34248276-34248458)
chr8 (300-442)||(34248033-34248176)
chr8 (324-442)||(18905837-18905955)
chr8 (341-442)||(32931399-32931500)
chr8 (373-442)||(36997196-36997265)
chr8 (382-442)||(17607219-17607279)
chr8 (351-442)||(10989039-10989130)
chr8 (351-442)||(10989246-10989337)
chr8 (351-442)||(43599319-43599410)
chr8 (351-441)||(15011035-15011125)
chr8 (324-442)||(21085153-21085271)
chr8 (341-466)||(21653325-21653451)
chr8 (351-444)||(33435891-33435984)
chr8 (371-444)||(36039797-36039870)
chr8 (351-444)||(42228779-42228872)
chr8 (383-431)||(12941610-12941658)
chr8 (341-441)||(22277522-22277622)
chr8 (351-442)||(8559589-8559680)
chr8 (351-442)||(18313792-18313883)
chr8 (373-444)||(33435709-33435780)
chr8 (324-406)||(23027546-23027628)
chr8 (380-442)||(39124961-39125023)
chr8 (262-316)||(39590593-39590647)
chr8 (341-442)||(21653802-21653903)
chr8 (351-444)||(35561674-35561767)
chr8 (371-444)||(36037218-36037291)
chr8 (256-304)||(3184072-3184120)
chr8 (370-442)||(16454640-16454712)
chr8 (370-442)||(40902398-40902470)
chr8 (351-442)||(15010826-15010917)
chr8 (259-306)||(18905746-18905793)
chr8 (351-442)||(20760665-20760756)
chr8 (351-442)||(30176469-30176560)
chr8 (383-442)||(43984321-43984380)
chr8 (372-442)||(3183916-3183986)
chr8 (324-442)||(20298521-20298639)
chr8 (260-318)||(27402544-27402602)
chr8 (259-316)||(32931296-32931354)
chr8 (351-444)||(5496569-5496662)
chr8 (387-444)||(9595996-9596053)
chr8 (345-442)||(14019810-14019907)
chr8 (345-442)||(15711498-15711595)
chr8 (259-304)||(21653216-21653261)
chr8 (259-304)||(36997056-36997101)
chr8 (255-316)||(38886988-38887049)
chr8 (385-442)||(39588089-39588146)
chr8 (1-91)||(770338-770425)
chr8 (351-443)||(26122748-26122840)
chr8 (370-442)||(35561485-35561557)
chr8 (382-442)||(35908717-35908777)
chr8 (390-442)||(36993952-36994004)
chr8 (382-442)||(38287969-38288029)
[»] chr5 (64 HSPs)
chr5 (3-170)||(4351620-4351788)
chr5 (260-442)||(38663164-38663346)
chr5 (298-442)||(29432367-29432511)
chr5 (351-444)||(20720553-20720646)
chr5 (351-442)||(13413592-13413683)
chr5 (324-442)||(13843678-13843796)
chr5 (324-442)||(13843994-13844112)
chr5 (324-442)||(37995639-37995757)
chr5 (382-442)||(24918200-24918260)
chr5 (382-442)||(24994108-24994168)
chr5 (351-442)||(48109-48200)
chr5 (351-442)||(35526993-35527084)
chr5 (343-442)||(38131764-38131863)
chr5 (351-442)||(40169046-40169137)
chr5 (324-442)||(873701-873819)
chr5 (366-444)||(4296668-4296746)
chr5 (345-442)||(84039-84136)
chr5 (324-441)||(27760056-27760173)
chr5 (351-443)||(2908566-2908658)
chr5 (345-441)||(32395320-32395416)
chr5 (345-437)||(33040065-33040157)
chr5 (351-466)||(36878334-36878450)
chr5 (351-442)||(2908774-2908865)
chr5 (351-442)||(28358040-28358131)
chr5 (351-442)||(34457311-34457402)
chr5 (351-442)||(38376739-38376830)
chr5 (351-442)||(43490468-43490559)
chr5 (324-442)||(1028098-1028216)
chr5 (372-442)||(2716575-2716645)
chr5 (352-442)||(3762915-3763005)
chr5 (380-441)||(20720361-20720422)
chr5 (345-442)||(22196331-22196428)
chr5 (345-442)||(22196558-22196655)
chr5 (345-442)||(29396348-29396445)
chr5 (370-442)||(48316-48388)
chr5 (324-440)||(20811435-20811551)
chr5 (324-440)||(20837790-20837906)
chr5 (370-442)||(34457123-34457195)
chr5 (370-442)||(37656737-37656809)
chr5 (351-411)||(39268026-39268086)
chr5 (383-442)||(12965251-12965310)
chr5 (353-444)||(18107843-18107934)
chr5 (372-442)||(1892095-1892165)
chr5 (370-444)||(24125089-24125163)
chr5 (260-318)||(30587959-30588017)
chr5 (345-442)||(83816-83912)
chr5 (351-440)||(11632439-11632528)
chr5 (259-304)||(12595272-12595317)
chr5 (387-444)||(27760419-27760476)
chr5 (345-442)||(30329838-30329935)
chr5 (260-309)||(30588209-30588258)
chr5 (351-444)||(32501219-32501312)
chr5 (375-439)||(395399-395463)
chr5 (341-401)||(396258-396318)
chr5 (382-442)||(2471698-2471758)
chr5 (341-405)||(4464924-4464988)
chr5 (351-411)||(10668368-10668428)
chr5 (260-304)||(13843588-13843632)
chr5 (351-411)||(17135527-17135587)
chr5 (370-442)||(18914166-18914238)
chr5 (260-316)||(31973281-31973337)
chr5 (382-442)||(35527279-35527339)
chr5 (370-442)||(37781849-37781921)
chr5 (260-304)||(37995803-37995847)
[»] chr1 (59 HSPs)
chr1 (324-442)||(4022130-4022248)
chr1 (324-442)||(33879783-33879901)
chr1 (324-442)||(33964354-33964472)
chr1 (324-442)||(43423260-43423378)
chr1 (13-159)||(51389655-51389801)
chr1 (324-444)||(17419768-17419888)
chr1 (341-444)||(2697334-2697437)
chr1 (324-442)||(31305692-31305810)
chr1 (324-441)||(45264644-45264760)
chr1 (324-442)||(19937048-19937166)
chr1 (324-442)||(20735503-20735621)
chr1 (371-444)||(41812661-41812734)
chr1 (351-444)||(43361555-43361648)
chr1 (324-444)||(8520096-8520216)
chr1 (370-442)||(29413375-29413447)
chr1 (351-466)||(11590428-11590543)
chr1 (351-442)||(15392033-15392124)
chr1 (350-441)||(20735762-20735853)
chr1 (341-444)||(40664208-40664311)
chr1 (351-441)||(39649090-39649180)
chr1 (341-442)||(29383628-29383729)
chr1 (345-442)||(38474285-38474382)
chr1 (351-444)||(43361760-43361853)
chr1 (345-442)||(45858657-45858754)
chr1 (351-442)||(29273230-29273321)
chr1 (372-442)||(35024252-35024322)
chr1 (351-441)||(52846855-52846945)
chr1 (341-442)||(2104265-2104366)
chr1 (260-316)||(8520391-8520448)
chr1 (370-439)||(15391846-15391915)
chr1 (345-442)||(17294980-17295077)
chr1 (345-442)||(18585040-18585137)
chr1 (257-441)||(19696701-19696887)
chr1 (341-442)||(28509392-28509493)
chr1 (345-442)||(29228677-29228774)
chr1 (381-442)||(36332150-36332211)
chr1 (260-309)||(41590390-41590439)
chr1 (341-441)||(37600870-37600970)
chr1 (351-411)||(38871191-38871251)
chr1 (382-442)||(45403479-45403539)
chr1 (383-442)||(463088-463147)
chr1 (383-442)||(11149428-11149487)
chr1 (351-442)||(22892693-22892784)
chr1 (345-404)||(31411603-31411662)
chr1 (370-444)||(24131884-24131958)
chr1 (372-442)||(35024465-35024534)
chr1 (373-435)||(36326936-36326998)
chr1 (345-442)||(51722255-51722353)
chr1 (351-444)||(5222702-5222795)
chr1 (345-442)||(12287850-12287947)
chr1 (259-316)||(13978476-13978533)
chr1 (345-438)||(27958056-27958149)
chr1 (345-442)||(29228450-29228547)
chr1 (351-444)||(33342281-33342374)
chr1 (260-316)||(35926377-35926434)
chr1 (355-411)||(10017364-10017420)
chr1 (341-444)||(13356919-13357023)
chr1 (323-411)||(35892001-35892089)
chr1 (351-411)||(45395560-45395620)
[»] chr2 (59 HSPs)
chr2 (324-442)||(43169223-43169341)
chr2 (341-442)||(23054324-23054425)
chr2 (345-444)||(28193578-28193677)
chr2 (324-442)||(3976476-3976594)
chr2 (324-442)||(21214206-21214324)
chr2 (324-442)||(43195765-43195883)
chr2 (343-442)||(10849496-10849595)
chr2 (324-438)||(18901873-18901987)
chr2 (344-442)||(25441697-25441795)
chr2 (341-442)||(3977008-3977109)
chr2 (341-442)||(11969050-11969151)
chr2 (324-444)||(6183369-6183489)
chr2 (324-440)||(21213892-21214008)
chr2 (351-442)||(20998994-20999085)
chr2 (351-442)||(32667191-32667282)
chr2 (351-441)||(883607-883697)
chr2 (342-442)||(42768339-42768437)
chr2 (351-442)||(8044550-8044642)
chr2 (352-444)||(27545119-27545211)
chr2 (345-444)||(10862061-10862160)
chr2 (351-442)||(17727412-17727503)
chr2 (351-442)||(34775365-34775456)
chr2 (372-442)||(38760322-38760392)
chr2 (351-444)||(16006985-16007078)
chr2 (380-444)||(10429776-10429840)
chr2 (346-442)||(17325173-17325269)
chr2 (380-444)||(28895564-28895627)
chr2 (351-443)||(29684019-29684111)
chr2 (380-444)||(33277556-33277620)
chr2 (351-442)||(3435491-3435582)
chr2 (257-304)||(3977172-3977219)
chr2 (351-438)||(12431906-12431993)
chr2 (351-442)||(19860045-19860136)
chr2 (383-442)||(30156248-30156307)
chr2 (383-442)||(30160367-30160426)
chr2 (370-441)||(31761358-31761429)
chr2 (370-440)||(7257615-7257685)
chr2 (324-442)||(7877825-7877943)
chr2 (348-442)||(39596711-39596805)
chr2 (372-442)||(45420697-45420767)
chr2 (259-304)||(7877734-7877779)
chr2 (373-442)||(10542068-10542137)
chr2 (259-296)||(10849668-10849705)
chr2 (345-442)||(10862308-10862405)
chr2 (345-442)||(15962162-15962259)
chr2 (259-304)||(25441586-25441631)
chr2 (345-442)||(33532741-33532838)
chr2 (345-442)||(39420699-39420796)
chr2 (252-316)||(42768488-42768553)
chr2 (370-442)||(883877-883949)
chr2 (385-441)||(2333364-2333420)
chr2 (260-311)||(3976848-3976900)
chr2 (385-441)||(15061271-15061327)
chr2 (260-304)||(21214370-21214414)
chr2 (370-442)||(32667004-32667076)
chr2 (352-440)||(32975260-32975348)
chr2 (351-442)||(33985776-33985865)
chr2 (260-304)||(43169133-43169177)
chr2 (260-304)||(43195675-43195719)
[»] scaffold0989 (1 HSPs)
scaffold0989 (351-442)||(2952-3043)
[»] scaffold0054 (1 HSPs)
scaffold0054 (351-442)||(21268-21359)
[»] scaffold1138 (2 HSPs)
scaffold1138 (373-442)||(2084-2153)
scaffold1138 (370-444)||(1876-1950)
[»] scaffold0434 (2 HSPs)
scaffold0434 (352-466)||(13315-13430)
scaffold0434 (370-442)||(13540-13612)
[»] scaffold0029 (1 HSPs)
scaffold0029 (351-442)||(76860-76951)


Alignment Details
Target: chr3 (Bit Score: 179; Significance: 2e-96; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 19768303 - 19768084
Alignment:
Q  1 taggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcggaggnnnn 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        
T  19768303 taggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcagaggaaaa 19768204  T
Q  101 nnncttacataaacaaaacacataatgcagtgtaacacacaccgacagccacgaagaaaaagctccctcatgttcgaacatataagcttaagtcttggac 200  Q
       |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19768203 aaacttacataaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaagtcttggac 19768104  T
Q  201 atataagcttaagtcttctt 220  Q
    |||||||||||||| |||||    
T  19768103 atataagcttaagtgttctt 19768084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 29199815 - 29199652
Alignment:
Q  4 gcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcggaggnnnnnnn 103  Q
    ||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||| ||| |||| |||||||||||||||||||   |||           
T  29199815 gcaaagagtaaaattaaatgaacaaagcatatcctacaaaatggctaaacagaaacatcgaaagcaggcctgaatttgaagtagcag---aggaaaaaaa 29199719  T
Q  104 cttacataaacaaaacacataatgcagtgtaacacacaccgacagccacgaagaaaaagctccctca 170  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  29199718 cttacataaacaaaacacataatgcagcataacacacaccgacagccacgaagaaaaagctccctca 29199652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 12572312 - 12572461
Alignment:
Q  3 ggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcggaggnnnnnn 102  Q
    |||||||| ||||||||||| |||||||  |||   |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||          
T  12572312 ggcaaagattaaaattgaatcaacaaagtatatgatacaaaatggctaaaaagaaaaattgaaggcagacctgaatttgaagtagcagcgcaggcaaaaa 12572411  T
Q  103 ncttacataaacaaaacacataatgcagtgtaacacacaccgacagccac 152  Q
     ||||||||||||||||||| ||||| | ||||||||||| ||| |||||    
T  12572412 acttacataaacaaaacacacaatgccgcgtaacacacactgactgccac 12572461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 13548776 - 13548925
Alignment:
Q  3 ggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcggaggnnnnnn 102  Q
    |||||||| ||||||||||| |||||||  |||   |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||          
T  13548776 ggcaaagattaaaattgaatcaacaaagtatatgatacaaaatggctaaaaagaaaaattgaaggcagacctgaatttgaagtagcagcgcaggcaaaaa 13548875  T
Q  103 ncttacataaacaaaacacataatgcagtgtaacacacaccgacagccac 152  Q
     ||||||||||||||||||| ||||| | ||||||||||| ||| |||||    
T  13548876 acttacataaacaaaacacacaatgccgcgtaacacacactgactgccac 13548925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 440
Target Start/End: Complemental strand, 43101494 - 43101378
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||| ||| | | ||||||| | ||||||||||||| |||||||||| ||||| || ||| || |    
T  43101494 ttgtgttggctttgagggggtggatttagtcccacatcagatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaaatcgg 43101395  T
Q  424 ttttgtaaggatgagtt 440  Q
    |||||||||||||||||    
T  43101394 ttttgtaaggatgagtt 43101378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 34250568 - 34250508
Alignment:
Q  256 tttttgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  34250568 tttttgttggaaattccgccttaattgcggtcagctcctagccgcctaattgcgacatttg 34250508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 44573620 - 44573738
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||| | ||| | || | |||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  44573620 ttgtgttggctttgagggggtggatttagtcccacataagatagataaaaatcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 44573719  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  44573720 ttttgtaaggatgagttag 44573738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 54369020 - 54369138
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | | ||||||| | ||||||||||||| |||||||||| |||||||| |||  | |    
T  54369020 ttgtgttggctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcactttacaaaccgg 54369119  T
Q  424 ttttgtaaggatgagttag 442  Q
    ||| |||||||||||||||    
T  54369120 tttcgtaaggatgagttag 54369138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 442
Target Start/End: Original strand, 24539108 - 24539253
Alignment:
Q  298 cgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagag-tttataaaaa 396  Q
    |||||||||| |||||||||| || || ||| ||| |||||  ||||||||||||||| ||||||  || | ||||||||| ||||||| ||| |||| |    
T  24539108 cgcctaattgtgacatttgagttgcctcgtgttggctttgagggggtggatttagtcctacatcagttagataagactcttgataagagttttgtaaaga 24539207  T
Q  397 ggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||| |||| ||||| || |||| |  |||||||||||||||||||    
T  24539208 ggagacactcctcaccttacaagccgattttgtaaggatgagttag 24539253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 466
Target Start/End: Complemental strand, 39956770 - 39956654
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagactac-ga 449  Q
    |||||||||||| ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | |||||||||||||||||||| || |  |    
T  39956770 agtcccacatcagatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggctccaaa 39956671  T
Q  450 tttgaacatggtatcag 466  Q
    ||| |||||||||||||    
T  39956670 tttcaacatggtatcag 39956654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 22339749 - 22339840
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||||| ||||||||||||||||||||    
T  22339749 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagtcggttttgtaaggatgagttag 22339840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 50692534 - 50692625
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| ||||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  50692534 agtcccacatcggatagacaagactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 50692625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 44573307 - 44573425
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| |||||  | |||| | |    
T  44573307 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccctacaagccgg 44573406  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  44573407 ttttgtaaggatgagttag 44573425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 3985771 - 3985872
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | | |||| || | ||||||||||||| |||| ||||| ||||| || |||| | ||||||||||||||||||    
T  3985771 gggtggatttagtcccacatcggatagatatgacttttgagaagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagtt 3985870  T
Q  441 ag 442  Q
    ||    
T  3985871 ag 3985872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 441
Target Start/End: Complemental strand, 14170102 - 14170005
Alignment:
Q  344 tggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    ||||||||||||||||||  ||| | || |||||| | |||| |||||||| |||||||||| ||||| || |||| | |||||||||||||||||||    
T  14170102 tggatttagtcccacatcggataaataacactcttgagaagattttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtta 14170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 21750473 - 21750574
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||   || | | ||  ||| || |||||||||||| |||||||||| ||||| || |||| ||||||||||||||||||||    
T  21750473 gggtggatttagtcccacatcggttagataggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagtt 21750572  T
Q  441 ag 442  Q
    ||    
T  21750573 ag 21750574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 341 - 441
Target Start/End: Complemental strand, 34715561 - 34715461
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | |  ||| || | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  34715561 gggtggatttagtcccacatcggatagatagcacttttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 34715462  T
Q  441 a 441  Q
    |    
T  34715461 a 34715461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 9264596 - 9264505
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||||| |||||| |||||||| | |||||||| |||| | ||||||||||||||||||||    
T  9264596 agtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttag 9264505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 49477542 - 49477633
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  49477542 agtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 49477633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 50692331 - 50692422
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  50692331 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 50692422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 51338537 - 51338446
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  51338537 agtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 51338446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 4255491 - 4255609
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||| ||  | |  |||||| | |||| |||||||| |||| ||||| |||||||| |||| | |    
T  4255491 ttgtgttggctttgagggggtggatttagtcccacatcagatggatagcactcttgagaagaatttataaagaggatgcactcctcactttacaagccgg 4255590  T
Q  424 ttttgtaaggatgagttag 442  Q
    ||||| |||||||||||||    
T  4255591 ttttgcaaggatgagttag 4255609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 4256215 - 4256333
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||  | || |||||| | ||||||||||||| ||||| |||| |||| ||| |||||| |    
T  4256215 ttgtgttggctttgagggggtggatttagtcccacatcggatggataacactcttgagaagagtttataaagaggagacactcctcattttacaagtcgg 4256314  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||| |||| |||||||||    
T  4256315 ttttttaagaatgagttag 4256333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 13769414 - 13769296
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||||||||   ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || ||||   |    
T  13769414 ttgtgttggctttgagggggtggatttagtcccacattggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagctgg 13769315  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  13769314 ttttgtaaggatgagttag 13769296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 27219327 - 27219421
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggat 435  Q
    |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | |||||||||||||    
T  27219327 gggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggat 27219421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 50203980 - 50203862
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||| ||||||| ||||||  ||| | ||||||||| | ||||||||||||| |||||||||| ||||| ||  ||  | |    
T  50203980 ttgtgttggctttgagggggtgggtttagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcactcctcaccttataaaccgg 50203881  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  50203880 ttttgtaaggatgagttag 50203862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 9179135 - 9179232
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || || | | ||||||||||||| |||| ||||| ||||| || |||||| ||||||||||||||||||||    
T  9179135 ggatttagtcccacatcggatagacatgattcatgagaagagtttataaagaggatgcactcctcaccttacaagtcggttttgtaaggatgagttag 9179232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 442
Target Start/End: Original strand, 44573966 - 44574035
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  44573966 actcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 44574035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 442
Target Start/End: Complemental strand, 10453808 - 10453708
Alignment:
Q  342 ggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||||||| |||  ||| | | || |||| | ||| ||||||||| |||||||||| ||||| || |||| | |||||||||||||||||||    
T  10453808 ggtggatttagtcccagatcggatagataggattcttgagaagggtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtta 10453709  T
Q  442 g 442  Q
    |    
T  10453708 g 10453708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 39078848 - 39078776
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  39078848 aagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 39078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 9264182 - 9264091
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  9264182 agtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 9264091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 9264389 - 9264298
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  9264389 agtcccacatcggatagacaagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 9264298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 22407744 - 22407653
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||  | |||||| |||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  22407744 agtcccacatcggatagacaagactctcgagaagagtatataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 22407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 39956563 - 39956472
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| ||| | |||| |||| | ||||||||||||| ||||| || | ||||| || |||| ||||||||||||||||| ||||    
T  39956563 agtcccacatcagatagacaagaatcttaagaagagtttataaagaggagacaatcctcaccttacaagccagttttgtaaggatgaattag 39956472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 51642731 - 51642640
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  51642731 agtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 51642640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 33909724 - 33909633
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||| |||   || |||||| |||||||||||||||   |||||| | ||||| || |||||| ||||||||||||||||||||||    
T  33909724 agtcccacatcagataactaaaactcttgataagagtttataaat--gaggcaatcctcaccttgcaagtcggttttgtaaggatgagttagac 33909633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 45443261 - 45443379
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||||||||   ||| | |  |||||| | ||||||||||||| ||||||||||  |||| || |||| | |    
T  45443261 ttgtgttggctttgagggggtggatttagtcccacattggatagatagcactcttgagaagagtttataaagaggaggcactcttcaccttacaagccgg 45443360  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||| ||||||||||||||    
T  45443361 ttttttaaggatgagttag 45443379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 53640268 - 53640178
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||| ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||| |||||||||||||||    
T  53640268 agtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttatgtaaggatgagtta 53640178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 10856728 - 10856631
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||  | | || |||| | ||||||||||||| |||||||||| || ||| | |||| | ||||||||||||||||||||    
T  10856728 ggatttagtcccacatcggatggataggattcttgaaaagagtttataaagaggaggcactccttactatacaagccggttttgtaaggatgagttag 10856631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 11244643 - 11244546
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | |  |||| | ||||||||||||| |||||||||| |||||  | |||| | ||||||||||||||||||||    
T  11244643 ggatttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtaaggatgagttag 11244546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 44145217 - 44145124
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||| ||| | ||||||||| |||| |||||||||| ||||| || ||||||| ||  ||||  ||||| ||||||||| ||||||    
T  44145217 agtcccacatcagatagataagactcttgataatagtttataaagaggagacaatactcaccttataagttggttttataaggatgatttagac 44145124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 48511741 - 48511644
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  48511741 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttag 48511644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 662615 - 662674
Alignment:
Q  256 tttttgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    ||||||||||||||||||| |  |||||||||||| ||||| |||||||||||| ||||||    
T  662615 tttttgttggaaattccgccta-attgcggtccgcccctagtcgcctaattgcgccatttg 662674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 13769504 - 13769460
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||    
T  13769504 tgttggaaattccgctttaattgcggtccgcccctagtcgcctaa 13769460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 22407506 - 22407446
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| |||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  22407506 aagagtatataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 22407446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 35011891 - 35011963
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| ||||||||||||||| |||||||||| ||||| ||   |  | ||||||||||||||||||||    
T  35011891 aagactcttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttag 35011963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 49477354 - 49477426
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | || |||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  49477354 aagactcttgagaaaagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 49477426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 50057072 - 50057128
Alignment:
Q  386 gtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| |||||||||  ||||| || |||| ||||||||||||||||||||||    
T  50057072 gtttataaagaggaggcacccctcaccttacaagccagttttgtaaggatgagttag 50057128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 51642505 - 51642433
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  51642505 aagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 51642433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 4191218 - 4191127
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| ||||| || | || || || |||| | ||||||||||||||||||||    
T  4191218 agtcccacatcggatagacaagactcttgagaagagtttataaagaggagacaatcctgaccttacaagccggttttgtaaggatgagttag 4191127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 37058867 - 37058776
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| ||| | ||||||||| | |||||| |||||| |||||| | | ||||| || |||  | ||||||||||||||||||||    
T  37058867 agtcccacatcagatagacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaaaccggttttgtaaggatgagttag 37058776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 38300347 - 38300288
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||||| | ||| || |||| | ||||||||||||||||||||    
T  38300347 agagtttataaagaggaggcactccccaccttacaagccggttttgtaaggatgagttag 38300288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 38300816 - 38300757
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||||| ||||| || |||| | |||||||| |||||||||||    
T  38300816 agagtttataaagaggaggcactcctcaccttacaagccggttttgtacggatgagttag 38300757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 34356906 - 34356848
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||| |||| ||||| ||||| || |||| | |||||||||||||||||||    
T  34356906 agagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagtta 34356848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 444
Target Start/End: Complemental strand, 39391040 - 39390978
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||||||| |||||| ||||||| | || ||| ||  |||||||||||||||||||||    
T  39391040 aagagtttataaagaggaggtactactcgccttacaattcgcttttgtaaggatgagttagac 39390978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 441
Target Start/End: Complemental strand, 40230715 - 40230645
Alignment:
Q  371 agactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||| || |||||||||||| |||||||| | ||||| || |||| | ||||||||||| |||||||    
T  40230715 agactcttgatgagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggttgagtta 40230645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 41380705 - 41380822
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| ||||||| || | ||| || |||| | |    
T  41380705 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggccct-cacaccttacaagccgg 41380803  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||| ||||||||    
T  41380804 ttttgtaaggttgagttag 41380822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 44145469 - 44145400
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||  ||| | ||| ||||||||||||||||    
T  44145469 gactcttgataagagtt-ataaaaaggaggcactcctcaccttataagccggttctgtaaggatgagttag 44145400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 411
Target Start/End: Complemental strand, 47833768 - 47833698
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||||||||||||  ||| | | ||||||| | ||| ||||||||| |||||||||| |||||    
T  47833768 gggtggatttagtcccacatcggatagataggactcttgagaagtgtttataaagaggaggcactcctcac 47833698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 411
Target Start/End: Complemental strand, 48685423 - 48685353
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||||||||||||  ||||| |  |||||| | ||||||||||||| ||||| |||| |||||    
T  48685423 gggtggatttagtcccacatcggatatatagtactcttgagaagagtttataaagaggagacactcctcac 48685353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 304
Target Start/End: Original strand, 4255400 - 4255445
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    |||||||||||||||| || |||||||||||| ||||| |||||||    
T  4255400 ttgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 4255445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 14170212 - 14170155
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    |||||||| |||||| |||||||||| |||| ||||||||||| ||||||| ||||||    
T  14170212 tgttggaagttccgcctttattgcggcccgcccctagccgcctaaattgcggcatttg 14170155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 24453780 - 24453877
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | |  |||| | ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  24453780 ggatttagtcccacatcggatagatagggttcttgagaagagtttataaacaggaggcactcctcaccgtacaagccggttttgtatggatgagttag 24453877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 27219220 - 27219277
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    ||||||||||||||| || |||||||||||| ||||| ||||| ||||||||| ||||    
T  27219220 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttg 27219277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 33909899 - 33909838
Alignment:
Q  381 taagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||| |||| ||||| ||| | || |||| | ||||||||||||||||||||    
T  33909899 taagagtttataaagaggatgcactcctcgccttacaagccggttttgtaaggatgagttag 33909838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 440
Target Start/End: Original strand, 35015493 - 35015582
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||  ||| | || |||||| |||| |||||||||| |||||||| | ||||||||  ||| | |||||||||| |||||||    
T  35015493 agtcccacatcggatagataaaactcttgataaaagtttataaagaggaggcaatcctcactttataagccggttttgtaagtatgagtt 35015582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 35358549 - 35358456
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||| ||||||| ||| | ||||||||| | || ||| |||||||||||| || | ||||| || |||| || |||||| ||||||||||||||    
T  35358549 agtctcacatcagatagataagactcttgaaaaaagtatataaaaaggagacaatcctcaccttacaagccaattttgtgaggatgagttagac 35358456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 45443171 - 45443228
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    ||||||||||||||| || |||||||||||| ||||| ||||| ||||||||| ||||    
T  45443171 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttg 45443228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 54368930 - 54368987
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    ||||||||||||||| || |||||||||||| ||||| ||||| ||||||||| ||||    
T  54368930 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttg 54368987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 54591561 - 54591468
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | ||||||||| | |||||||||||||   |||||| | ||||| || |||| | |||||||||| |||||||||||    
T  54591561 agtcccacatcggatagacaagactcttgagaagagtttataaaggtgaggcaatcctcaccttacaagccggttttgtaagcatgagttagac 54591468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 4255761 - 4255805
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||    
T  4255761 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 4255805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 11414390 - 11414462
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| ||||| || | ||||| ||  ||| | ||||||||||||||||||||    
T  11414390 aagactcttgagaagagtttataaagaggagacaatcctcaccttagaagccggttttgtaaggatgagttag 11414462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 25628017 - 25627925
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaa-aggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | |||| |||| | |||||| ||||||| |||||||| | ||||| || |||||  ||||||||||||||||||||    
T  25628017 agtcccacatcggatagataagattcttcagaagagtatataaaagaggaggcaatcctcaccttacaagttggttttgtaaggatgagttag 25627925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 32034100 - 32034148
Alignment:
Q  352 gtcccacatcaaatataaaagactctttataagagtttataaaaaggag 400  Q
    |||||||||| |||| | ||||||||| ||||||||||||| |||||||    
T  32034100 gtcccacatcgaatagataagactcttgataagagtttatacaaaggag 32034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 441
Target Start/End: Complemental strand, 33909434 - 33909334
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    ||||||||||||||||| ||||  ||   | ||| ||| |||||||||||| || ||||| |||| | ||| || |||||||||||| ||| ||||||||    
T  33909434 gggtggatttagtcccaaatcagttaggtaggacgcttaataagagtttattaagaggagacactccccaccttacaagtcagttttttaatgatgagtt 33909335  T
Q  441 a 441  Q
    |    
T  33909334 a 33909334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 403
Target Start/End: Original strand, 34992585 - 34992637
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggca 403  Q
    |||||||||||| ||| | ||||||||| | ||||||||||||| ||||||||    
T  34992585 agtcccacatcagatagataagactcttgagaagagtttataaagaggaggca 34992637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 403
Target Start/End: Original strand, 34992877 - 34992929
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggca 403  Q
    |||||||||||| ||| | ||||||||| | ||||||||||||| ||||||||    
T  34992877 agtcccacatcagatagataagactcttgagaagagtttataaagaggaggca 34992929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 466
Target Start/End: Original strand, 37223583 - 37223699
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagactac-ga 449  Q
    |||||||||||  ||| | ||||||| | | ||||||||||||| |||||||| |  |||| || |||| | |||||||||||| ||||||| || |  |    
T  37223583 agtcccacatcggatagataagactcctgagaagagtttataaagaggaggcaatcatcaccttacaagccggttttgtaaggaagagttaggctccaaa 37223682  T
Q  450 tttgaacatggtatcag 466  Q
    ||| |||||||||||||    
T  37223683 tttcaacatggtatcag 37223699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 44461141 - 44461069
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagact 445  Q
    |||||| ||||||||||||||| ||||| || | ||||| ||   | ||||||||||||||||||||| ||||    
T  44461141 actcttgataagagtttataaagaggagacattcctcaccttgtgaatcagttttgtaaggatgagttggact 44461069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 175; Significance: 5e-94; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 22082996 - 22082777
Alignment:
Q  1 taggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcggaggnnnn 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||         
T  22082996 taggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggcaaaacagaaacattgaaggcatacctgaatttgaagtagcagcggagaaaaa 22082897  T
Q  101 nnncttacataaacaaaacacataatgcagtgtaacacacaccgacagccacgaagaaaaagctccctcatgttcgaacatataagcttaagtcttggac 200  Q
       |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22082896 aaacttacataaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaagtcttggac 22082797  T
Q  201 atataagcttaagtcttctt 220  Q
    ||||||||||||||||||||    
T  22082796 atataagcttaagtcttctt 22082777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 10418461 - 10418343
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| || |||||||||||| |||||||||| ||||| || |||| | |    
T  10418461 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagcactcttgatgagagtttataaagaggaggcactcctcaccttacaagccgg 10418362  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  10418361 ttttgtaaggatgagttag 10418343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 31979 - 31878
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    ||||||||||||||| |||||  ||| | ||||||||| ||||||||||||||| | |||||||| ||||  || |||| ||||||||||||||| ||||    
T  31979 gggtggatttagtccaacatcggatagataagactcttgataagagtttataaagacgaggcactcctcaacttacaagccagttttgtaaggattagtt 31880  T
Q  441 ag 442  Q
    ||    
T  31879 ag 31878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 8144015 - 8144116
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  8144015 gggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 8144114  T
Q  441 ag 442  Q
    ||    
T  8144115 ag 8144116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 15102721 - 15102627
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttc-aagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||||||| |  |||||||| || |||||||||||| |||||||||| |||||||  | ||| | ||||||||||||||||||||||    
T  15102721 agtcccacatcaaatagatgagactcttgatgagagtttataaagaggaggcactcctcacttcacaaagccggttttgtaaggatgagttagac 15102627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 19054474 - 19054592
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||| |||||||||||||  ||| | || |||||| | ||||||||||||| | |||||||| ||||| || |||| | |    
T  19054474 ttgtgttggctttgagggggtggaattagtcccacatcggatagataacactcttgagaagagtttataaagatgaggcactcctcaccttacaagccgg 19054573  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  19054574 ttttgtaaggatgagttag 19054592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 24055232 - 24055114
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| | |||||||| ||||| || |||| | |    
T  24055232 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagacgaggcactcctcaccttacaagccgg 24055133  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  24055132 ttttgtaaggatgagttag 24055114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 437
Target Start/End: Original strand, 30539216 - 30539329
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| |||||||||  ||||| |||||||||||||||  ||| | ||||||||| |||||||||||||||   ||| |||| ||||| || |||| | |    
T  30539216 ttgtgttggttttgagggggtgaatttagtcccacatcggatagataagactcttgataagagtttataaaggcgagacactcctcaccttacaagccgg 30539315  T
Q  424 ttttgtaaggatga 437  Q
    ||||||||||||||    
T  30539316 ttttgtaaggatga 30539329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 15101207 - 15101116
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  15101207 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 15101116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 16877106 - 16877015
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  16877106 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 16877015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 10733561 - 10733443
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||||||||   | | | || |||||| | ||||||||||||| ||||| |||| ||||| || |||| | |    
T  10733561 ttgtgttggctttgagggggtggatttagtcccacattggacagataacactcttgagaagagtttataaagaggagacactcctcaccttacaagccgg 10733462  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  10733461 ttttgtaaggatgagttag 10733443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 28149802 - 28149892
Alignment:
Q  352 gtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||  ||| | || |||||| ||||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  28149802 gtcccacatcggatagataaaactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 28149892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 442
Target Start/End: Complemental strand, 1744916 - 1744847
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  1744916 actcttgaaaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 1744847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 442
Target Start/End: Complemental strand, 11313476 - 11313387
Alignment:
Q  353 tcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||  ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| ||||||||||||||||||||||    
T  11313476 tcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccagttttgtaaggatgagttag 11313387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 16590192 - 16590285
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | |||||||||   |||| |||||||| |||||||| | |||||||| |||| | ||||||||||||||||||||||    
T  16590192 agtcccacatcggatagacaagactcttgggaagaatttataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttagac 16590285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 16605188 - 16605095
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | |||||||||   |||| |||||||| |||||||| | |||||||| |||| | ||||||||||||||||||||||    
T  16605188 agtcccacatcggatagacaagactcttgggaagaatttataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttagac 16605095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 1206076 - 1206020
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    |||||||||||| || || |||||||||||| |||||||||||||||||| ||||||    
T  1206076 tgttggaaattctgccttcattgcggtccgcccctagccgcctaattgcggcatttg 1206020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 11198912 - 11199008
Alignment:
Q  261 gttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtccca 357  Q
    ||||| |||||||| ||||||||| |  |  ||||| ||| ||| ||||||||||||| ||||||||| ||| |||||  |||||||||||||||||    
T  11198912 gttgggaattccgcctttattgcgatatgtccctagtcgcttaaatgcgacatttgagttgtcttgtgttggctttgagggggtggatttagtccca 11199008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 24558591 - 24558682
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||| ||||||||||||    
T  24558591 agtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtgaggatgagttag 24558682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 5269350 - 5269276
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||| | ||||||||||||| || ||||| | ||||| || |||| | ||||||||||||||||||||||    
T  5269350 aagactcttgagaagagtttataaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttagac 5269276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 444
Target Start/End: Original strand, 23591528 - 23591630
Alignment:
Q  342 ggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||| |||||||||| ||| | |||| |||| | || |||||||| ||||||| ||||  |||| || |||| |  ||||||||||||||||||    
T  23591528 ggtggatttaatcccacatcagatagataagattcttgagaaaagtttatataaaggagacactcttcaccttacaagccgattttgtaaggatgagtta 23591627  T
Q  442 gac 444  Q
    |||    
T  23591628 gac 23591630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 19753710 - 19753609
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    ||||||||||||||||||||   ||| | | ||||||| | ||||||||||||| || || |||| ||||| || |||| | ||| ||||||||||||||    
T  19753710 gggtggatttagtcccacatggtatagataggactcttgagaagagtttataaagagaagacactcctcaccttacaagacggttctgtaaggatgagtt 19753611  T
Q  441 ag 442  Q
    ||    
T  19753610 ag 19753609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 8427553 - 8427649
Alignment:
Q  346 gatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||  ||||||  ||||| |||| |||| | ||||||||| ||| |||||||||| |||||  | |||||| ||||||||||| ||||||||    
T  8427553 gatttagtttcacatcggatatataagattcttgagaagagtttagaaagaggaggcactcctcaccgtacaagtcggttttgtaaggttgagttag 8427649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 11160331 - 11160427
Alignment:
Q  261 gttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtccca 357  Q
    ||||| |||||||| ||||||||| ||    ||||| ||| ||| ||| ||||||||| ||||||||| ||| |||||  |||||||||||||||||    
T  11160331 gttgggaattccgcctttattgcgatctatccctagtcgcttaaatgctacatttgagttgtcttgtgttggctttgagggggtggatttagtccca 11160427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 16876907 - 16876835
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | || |||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  16876907 aagactcttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 16876835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 24558815 - 24558887
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||| ||||||||||||| ||||| || | ||||| || ||||   ||||||||||||||||||||    
T  24558815 aagactctttagaagagtttataaagaggagacaatcctcaccttacaagctggttttgtaaggatgagttag 24558887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 30539126 - 30539170
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||    
T  30539126 tgttggaaattccgcctttattgcggtccgcccctagtcgcctaa 30539170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 442
Target Start/End: Original strand, 11316871 - 11316942
Alignment:
Q  371 agactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||| || |||||||||||| ||| |||||| |||||||  |||| | ||||||||||| ||||||||    
T  11316871 agactcttgatgagagtttataaagagggggcactcctcacttcacaagccggttttgtaaggttgagttag 11316942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 17147968 - 17147885
Alignment:
Q  384 gagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagactac-gatttgaacatggtatcag 466  Q
    ||||||||||| |||||||| | ||||| || |||| | |||||||||||||||||||| | ||  |||| |||||||||||||    
T  17147968 gagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccacaaatttcaacatggtatcag 17147885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 27914390 - 27914331
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||||| || || || |||| | ||||||||||||||||||||    
T  27914390 agagtttataaagaggaggcactccttaccttacaagccggttttgtaaggatgagttag 27914331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 12134606 - 12134488
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||| |||||||||||||  ||| | |  |||||| | ||||||||||||| ||||| |||| || || || |||  | |    
T  12134606 ttgtgttggctttgacggggtggacttagtcccacatcggatagatagcactcttgagaagagtttataaagaggagacactcctaaccttacaaaccgg 12134507  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  12134506 ttttgtaaggatgagttag 12134488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 442
Target Start/End: Original strand, 11317078 - 11317147
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| || |||||||||||| ||| |||||| |||||||  |||| | ||||||||||| ||||||||    
T  11317078 actcttgatgagagtttataaagagggggcactcctcacttcacaagccggttttgtaaggttgagttag 11317147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 442
Target Start/End: Complemental strand, 19712683 - 19712614
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| | ||||||||||||| |||||||| | ||||| || ||||   ||||||||||||||||||||    
T  19712683 actcttgagaagagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttag 19712614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 443
Target Start/End: Original strand, 20864511 - 20864556
Alignment:
Q  398 gaggcactactcacttttcaagtcagttttgtaaggatgagttaga 443  Q
    |||||||  ||||| || ||||||||||||||||||||||||||||    
T  20864511 gaggcacccctcaccttacaagtcagttttgtaaggatgagttaga 20864556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 439
Target Start/End: Complemental strand, 15102828 - 15102760
Alignment:
Q  371 agactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagt 439  Q
    |||||||| || |||||||||||| ||||| |||| |||||||  |||  | |||||||||||||||||    
T  15102828 agactcttgatgagagtttataaagaggagtcactcctcacttcacaaaccggttttgtaaggatgagt 15102760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 2e-84; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 37616984 - 37617198
Alignment:
Q  1 taggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcggaggnnnn 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||        
T  37616984 taggcaaagagtaaaattgaatgaaaaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacct-----tgaagtagcagcggaggaaaa 37617078  T
Q  101 nnncttacataaacaaaacacataatgcagtgtaacacacaccgacagccacgaagaaaaagctccctcatgttcgaacatataagcttaagtcttggac 200  Q
       |||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37617079 aaacttacataaacaaaacacataatgcagtataacacacgctgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaagtcttggac 37617178  T
Q  201 atataagcttaagtcttctt 220  Q
    ||||||||||||||||||||    
T  37617179 atataagcttaagtcttctt 37617198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 990528 - 990646
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||| |||||||||||||||  ||| | || |||||| | ||||||||||||| |||||||||| ||||| || |||||| |    
T  990528 ttgtgttggctttgagggggtgaatttagtcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcgg 990627  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  990628 ttttgtaaggatgagttag 990646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 45427375 - 45427257
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||| |||||    |||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  45427375 ttgtgttggctttgagggggtggatttagtcccacatcagatatattttactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 45427276  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  45427275 ttttgtaaggatgagttag 45427257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 324 - 444
Target Start/End: Original strand, 991185 - 991305
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | || |||||| | ||||||||||||  |||||||||| ||||| || |||| | |    
T  991185 ttgtgttggctttgagggggtggatttagtcccacatcggatagataacactcttgagaagagtttataatgaggaggcactcctcaccttacaagccgg 991284  T
Q  424 ttttgtaaggatgagttagac 444  Q
    |||||||||||||||||||||    
T  991285 ttttgtaaggatgagttagac 991305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 341 - 441
Target Start/End: Complemental strand, 29669784 - 29669684
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||| ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  29669784 gggtggatttagtcccacatcagatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 29669685  T
Q  441 a 441  Q
    |    
T  29669684 a 29669684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 15665134 - 15665252
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | | ||||||| | ||||||||||| | |||||||||| ||||| || |||| | |    
T  15665134 ttgtgttggctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttatatagaggaggcactcctcaccttacaagccgg 15665233  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  15665234 ttttgtaaggatgagttag 15665252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 45427059 - 45426941
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||| ||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||||| |    
T  45427059 ttgtgttggctttgagggggtggatttagccccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcgg 45426960  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  45426959 ttttgtaaggatgagttag 45426941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 53738331 - 53738213
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||||||||  |||| | ||||||||| | ||||||||||||| ||||| ||||  |||| || |||| |||    
T  53738331 ttgtgttggctttgagggggtggatttagtcccacatagaatagataagactcttgagaagagtttataaagaggagacactcgtcaccttacaagccag 53738232  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||| ||||    
T  53738231 ttttgtaaggatgacttag 53738213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 53740163 - 53740281
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  53740163 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 53740262  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  53740263 ttttgtaaggatgagttag 53740281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 29669469 - 29669368
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  29669469 gggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 29669370  T
Q  441 ag 442  Q
    ||    
T  29669369 ag 29669368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 51469479 - 51469580
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | | ||||||| | ||||||||||||| |||||||||| ||||| || |||| | ||| ||||||||||||||    
T  51469479 gggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttgtgtaaggatgagtt 51469578  T
Q  441 ag 442  Q
    ||    
T  51469579 ag 51469580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 442
Target Start/End: Complemental strand, 34206118 - 34205998
Alignment:
Q  323 cttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagt-ttataaaaaggaggcactactcacttttcaagtc 421  Q
    |||||| ||| |||||  |||||||||||||||||||||   || | ||||||||| |||||||| ||||||| |||||||||| ||||| || ||||      
T  34206118 cttgtgttggctttgagggggtggatttagtcccacatcggttagataagactcttgataagagtcttataaagaggaggcactcctcaccttacaagct 34206019  T
Q  422 agttttgtaaggatgagttag 442  Q
     ||||||||||||||||||||    
T  34206018 ggttttgtaaggatgagttag 34205998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 25753701 - 25753610
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| ||||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  25753701 agtcccacatcggatagacaagactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 25753610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 43972336 - 43972454
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| |||||||||  ||||| |||||||||||||||  ||| | | ||||||| | || |||| ||||| |||||||||| ||||| || |||| | |    
T  43972336 ttgtgttggttttgagggggtgaatttagtcccacatcggatagataggactcttgagaaaagttgataaagaggaggcactcctcaccttacaagccgg 43972435  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  43972436 ttttgtaaggatgagttag 43972454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 52214596 - 52214714
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||| ||||||||||||    || | || |||||| ||||||||||||||| |||||||||| ||||| || |||| | |    
T  52214596 ttgtgttggctttgagggggtggaattagtcccacattgggtagataatactcttgataagagtttataaagaggaggcactcctcaccttacaagccgg 52214695  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  52214696 ttttgtaaggatgagttag 52214714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 27048514 - 27048413
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||   || | | ||  ||| ||||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  27048514 gggtggatttagtcccacatcggttagataggaagcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 27048415  T
Q  441 ag 442  Q
    ||    
T  27048414 ag 27048413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 323 - 442
Target Start/End: Complemental strand, 34206380 - 34206260
Alignment:
Q  323 cttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagt-ttataaaaaggaggcactactcacttttcaagtc 421  Q
    |||||| ||| |||||  |||||||||||||| ||||||   || | ||||||||| |||||||| ||||||| |||||||||| ||||| || |||| |    
T  34206380 cttgtgttggctttgagggggtggatttagtctcacatcggttagataagactcttgataagagtcttataaagaggaggcactcctcaccttacaagcc 34206281  T
Q  422 agttttgtaaggatgagttag 442  Q
     |||| |||||||||||||||    
T  34206280 ggtttcgtaaggatgagttag 34206260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 50858309 - 50858424
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||| ||| | |  |||||| | ||||||||||||| |||||||||| |||   || |||| | |    
T  50858309 ttgtgttggctttgagggggtggatttagtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcactcctc---ttacaagccgg 50858405  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  50858406 ttttgtaaggatgagttag 50858424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 5488375 - 5488466
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  5488375 agtcccacatcggataaataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 5488466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 12016779 - 12016688
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  12016779 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 12016688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 12016987 - 12016896
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  12016987 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 12016896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 43943681 - 43943772
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  43943681 agtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 43943772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 439
Target Start/End: Complemental strand, 52827307 - 52827240
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagt 439  Q
    ||||||| ||||||||||||||| |||||||||| ||||| || |||| | |||||||||||||||||    
T  52827307 gactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 52827240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 29113458 - 29113548
Alignment:
Q  352 gtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||| ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || ||||   ||||||||||||||||||||    
T  29113458 gtcccacatcagatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttag 29113548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 8560067 - 8559974
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | ||||||||| |||||||||||||   |||||||| | ||||||||  ||| | ||||||||||||||||||||||    
T  8560067 agtcccacatcggatagataagactcttgataagagtttatatcgaggaggcaatcctcactttagaagccggttttgtaaggatgagttagac 8559974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 429
Target Start/End: Original strand, 22867065 - 22867170
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||||||| |||||  |||||||||||||||||| ||  ||| | | ||||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  22867065 ttgtgctggctttgagggggtggatttagtcccacgtcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 22867164  T
Q  424 ttttgt 429  Q
    ||||||    
T  22867165 ttttgt 22867170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 36558572 - 36558471
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | | |||| || | ||||||||||||| || | ||||| ||||| || |||| | ||||||||||||||||||    
T  36558572 gggtggatttagtcccacatcggatagatatgacttttgagaagagtttataaagagtaagcactcctcaccttacaagccggttttgtaaggatgagtt 36558473  T
Q  441 ag 442  Q
    ||    
T  36558472 ag 36558471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 48843123 - 48843022
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||| ||||| ||| | | ||||||| | ||||||||||||| |||||||||| ||||| || |||| | ||||| || |||| ||||    
T  48843123 gggtggatttagtcccgcatcagatagataggactcttgaaaagagtttataaagaggaggcactcctcaccttacaagccggttttttagggattagtt 48843024  T
Q  441 ag 442  Q
    ||    
T  48843023 ag 48843022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 51470485 - 51470582
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | ||||||| | ||||||||||||  ||||||| || ||||| || |||| | ||||||||||||||||||||    
T  51470485 ggatttagtcccacatcggatagataggactcttgagaagagtttataaggaggaggctctcctcaccttacaagccggttttgtaaggatgagttag 51470582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 9938483 - 9938550
Alignment:
Q  377 tttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||||||||||||  |||| |||| ||||| ||  ||||||||||||||||||| ||||||||    
T  9938483 tttataagagtttataaaggggagacacttctcaccttataagtcagttttgtaaggataagttagac 9938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 21497747 - 21497688
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  21497747 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 21497688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 21498227 - 21498286
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  21498227 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 21498286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 452
Target Start/End: Complemental strand, 37097833 - 37097726
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||||||||| ||| | | || |||| | |||| |||||||| ||||| |||| |||||| | ||||   |||||||||||||||||||| |    
T  37097833 ggatttagtcccacatcagatagataggattcttgagaagattttataaagaggagacactcctcactgtacaagcgggttttgtaaggatgagttaggc 37097734  T
Q  445 tacgattt 452  Q
     |||||||    
T  37097733 cacgattt 37097726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 444
Target Start/End: Complemental strand, 53386178 - 53386115
Alignment:
Q  381 taagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||||| ||||| || | ||||| || |||||| ||||||||||||||||||||||    
T  53386178 taagagtttataaagaggagacattcctcaccttacaagtcggttttgtaaggatgagttagac 53386115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 23018499 - 23018569
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  23018499 gactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaaggatgagttag 23018569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 27048204 - 27048142
Alignment:
Q  380 ataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||| |||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  27048204 ataaaagtttataaagaggaggcactcctcaccttgcaagccggttttgtaaggatgagttag 27048142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 50857993 - 50858111
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | |||| |||||||| | |||| ||| ||||| || |||| | |    
T  50857993 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagattttataaagaagaggtactcctcaccttacaagccgg 50858092  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  50858093 ttttgtaaggatgagttag 50858111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 56509590 - 56509708
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||| |||||  ||| | | ||| ||| | ||||||||||||| |||||||||| ||||  || |||| | |    
T  56509590 ttgtgttggctttgagggggtggatttagtcctacatcggatagataggacccttgagaagagtttataaagaggaggcactcctcaacttacaagccgg 56509689  T
Q  424 ttttgtaaggatgagttag 442  Q
    ||||||| |||||||||||    
T  56509690 ttttgtacggatgagttag 56509708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 28085731 - 28085792
Alignment:
Q  380 ataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    ||||||||||||||| |||||||||| ||||| || |||| | |||||||||||| ||||||    
T  28085731 ataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggacgagtta 28085792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 33385178 - 33385279
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtcccaca 359  Q
    ||||||| ||||||| |||||||||||||   ||||| | ||||||||||||||||||| ||  ||||| ||| ||| |  | ||| |||||||||||||    
T  33385178 tgttggatattccgcctttattgcggtccatccctagtcacctaattgcgacatttgagttgctttgtgttggctttcagggagtgaatttagtcccaca 33385277  T
Q  360 tc 361  Q
    ||    
T  33385278 tc 33385279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 441
Target Start/End: Complemental strand, 33797184 - 33797115
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    ||||||| ||||||||||||||| | |||||||| ||||| || |||| | |||| ||||||||||||||    
T  33797184 gactcttgataagagtttataaagacgaggcactcctcaccttccaagccggtttcgtaaggatgagtta 33797115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 33912082 - 33912142
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| |||||||||| |||||| |  ||| | ||||||||||||||||||||    
T  33912082 aagagtttataaagaggaggcactcctcactgtataagccggttttgtaaggatgagttag 33912142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 466
Target Start/End: Complemental strand, 49380957 - 49380861
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagactacgatttgaacatggtatcag 466  Q
    ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||| | ||| |||||| || | |||| |||||||||||||    
T  49380957 aagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtgatgataagttaggctccaatttcaacatggtatcag 49380861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 51469377 - 51469421
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||    
T  51469377 tgttggaaattccgcctttattgcggtccgcccctagtcgcctaa 51469421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 56511324 - 56511396
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| ||||||||||||||| |||||||||| ||||| ||   |  | ||||||||||||||||||||    
T  56511324 aagactcttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttag 56511396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 439
Target Start/End: Original strand, 3055812 - 3055879
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagt 439  Q
    ||||||| || |||||||||||| |||| ||||| ||||| ||  ||||| |||||||||||||||||    
T  3055812 gactcttgatgagagtttataaagaggatgcactcctcaccttaaaagtcggttttgtaaggatgagt 3055879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 27634422 - 27634331
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| |  |||||||||||||||||||    
T  27634422 agtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaattctcaccttacaagccgattttgtaaggatgagttag 27634331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 28245828 - 28245887
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  28245828 agagtttataaagaggaggcaatcctcaccttgcaagccggttttgtaaggatgagttag 28245887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 29734559 - 29734658
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    ||||| |||||||||||||||  ||| | | |||| || | |||||||  |||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  29734559 gggtgaatttagtcccacatcggatagataggacttttgagaagagttattaaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 29734658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 41176746 - 41176805
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||| ||||| ||||| || |||| | ||||||||||||||||||||    
T  41176746 agagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttag 41176805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 13254364 - 13254482
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||||||||   ||| | | |||| || | ||||||||||||| | |||||||| ||||| || |||  | |    
T  13254364 ttgtgttggctttgagggggtggatttagtcccacattggatagataggactattgagaagagtttataaagatgaggcactcctcaccttacaacccgg 13254463  T
Q  424 ttttgtaaggatgagttag 442  Q
    ||||||||| |||||||||    
T  13254464 ttttgtaagcatgagttag 13254482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 405
Target Start/End: Complemental strand, 28497310 - 28497256
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcact 405  Q
    |||||||||||  ||| | ||||||||| ||||||||||||||| ||||||||||    
T  28497310 agtcccacatcggatagataagactcttgataagagtttataaagaggaggcact 28497256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 53739847 - 53739965
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||||| |||  ||| | |  |||||| | ||||||||||||| |||||| ||| ||||  || |||| | |    
T  53739847 ttgtgttggctttgagggggtggatttagtcccatatcggatagatagtactcttgagaagagtttataaagaggaggaactcctcagcttacaagccgg 53739946  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||| ||||    
T  53739947 ttttgtaaggatgatttag 53739965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 990732 - 990789
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    ||||||||||||||| || |||||||||||| ||||| ||||| ||||||||| ||||    
T  990732 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttg 990789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 11290171 - 11290268
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||| | |||||  | |||| | |||||||| |||||||||||    
T  11290171 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtatggatgagttag 11290268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 442
Target Start/End: Complemental strand, 32987533 - 32987476
Alignment:
Q  385 agtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||| |||||||||| | ||| || |||||| ||||||||||||||| ||||    
T  32987533 agtttataaagaggaggcactccgcaccttacaagtcggttttgtaaggatgatttag 32987476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 56511531 - 56511572
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcac 411  Q
    ||||||||| ||||||||||||||| |||||||||| |||||    
T  56511531 aagactcttgataagagtttataaagaggaggcactcctcac 56511572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 432
Target Start/End: Original strand, 7193711 - 7193759
Alignment:
Q  384 gagtttataaaaaggaggcactactcacttttcaagtcagttttgtaag 432  Q
    |||| ||||||||||||||||| ||||| || |||||| ||||||||||    
T  7193711 gagtatataaaaaggaggcactcctcaccttacaagtcggttttgtaag 7193759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 444
Target Start/End: Original strand, 7910352 - 7910380
Alignment:
Q  416 caagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||||||||||||||||||||    
T  7910352 caagtcagttttgtaaggatgagttagac 7910380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 13254295 - 13254339
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| |||||||||||| || ||||| |||||||    
T  13254295 tgttggaaattccgcctttattgcggtctgcccctagtcgcctaa 13254339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 357 - 441
Target Start/End: Original strand, 20093346 - 20093430
Alignment:
Q  357 acatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||| ||| | ||||||||| |||||| |||||||| || | ||||| ||||| ||  || || |||||||||||||||||||    
T  20093346 acatcagataaataagactcttgataagaatttataaagagaatgcacttctcaccttataaatcggttttgtaaggatgagtta 20093430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 26943083 - 26943035
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgc 308  Q
    ||||||||||||||| |  ||| |||||||| |||||||||||||||||    
T  26943083 tgttggaaattccgcctacatttcggtccgcccctagccgcctaattgc 26943035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 28395216 - 28395276
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  28395216 aagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 28395276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 46528988 - 46528928
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  46528988 aagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttag 46528928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 48843230 - 48843186
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| ||||||||||||| | ||||| |||||||    
T  48843230 tgttggaaattccgcctttattgcggtccacccctagtcgcctaa 48843186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 439
Target Start/End: Original strand, 50307284 - 50307372
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagt 439  Q
    |||||||||||  ||| | ||||||||| | |||||||||||||  ||||||||| ||||| ||   |  |||||||||||||||||||    
T  50307284 agtcccacatcggatagataagactcttgacaagagtttataaagcggaggcactcctcaccttatgaaccagttttgtaaggatgagt 50307372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 52214506 - 52214550
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||    
T  52214506 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 52214550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 53740073 - 53740117
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||    
T  53740073 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 53740117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 260 - 442
Target Start/End: Complemental strand, 37272232 - 37272050
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtcccaca 359  Q
    ||||||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||| || || ||| ||| |||||  |||||||||||||||||||    
T  37272232 tgttggaaattccgcctttattgcggtccacccctagtcgcctaattgcgacatttgagttgcctcgtgttggctttgagggggtggatttagtcccaca 37272133  T
Q  360 tcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||   || | | ||||||| ||||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  37272132 tcggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 37272050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 442
Target Start/End: Original strand, 43288181 - 43288363
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtcccaca 359  Q
    ||||||||||||| | ||||||||| || || ||||| |||||||||| |||||||| | || || ||| ||| |||||  ||||||||||| |||||||    
T  43288181 tgttggaaattccacctttattgcgatctgcccctagtcgcctaattgtgacatttgtgttgcctcgtgttggctttgagggggtggatttactcccaca 43288280  T
Q  360 tcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||   || | | ||||||| ||||||||||||||| |||||||||| ||||  || |||  | ||||||||||| ||||||||    
T  43288281 tcggttagataggactcttgataagagtttataaagaggaggcactcctcatcttacaatccggttttgtaagggtgagttag 43288363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 44760582 - 44760512
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| ||||||||||||||| |||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  44760582 gactcttaataagagtttataaagaggaggcactcctcacctttcaagccagttttgtaaggatgagttag 44760512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 334 - 442
Target Start/End: Original strand, 29780138 - 29780246
Alignment:
Q  334 tttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaagg 433  Q
    ||||| || |||||||||||| ||||||||||| | | ||||||| | ||||||||||||| ||||| |||| ||||| || |||||| ||||| |||||    
T  29780138 tttgagagagtggatttagtctcacatcaaatagatatgactcttgagaagagtttataaagaggagacactcctcaccttacaagtcggttttataagg 29780237  T
Q  434 atgagttag 442  Q
    |||||||||    
T  29780238 atgagttag 29780246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 28910013 - 28910131
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||| | ||| | | |||||||   ||||||||||||| |||||||||| ||||| || |||| | |    
T  28910013 ttgtgttggctttgagggggtggatttagtcccacataagatagataggactcttgggaagagtttataaagaggaggcactcctcaccttacaagccgg 28910112  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  28910113 ttttgtaaggatgagttag 28910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 1661297 - 1661196
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | || |||||| | ||||||||||||| |||||||||| ||||| || |||| | |||||||||| |||||||    
T  1661297 gggtggatttagtcccacatcggatagataaaactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaagaatgagtt 1661198  T
Q  441 ag 442  Q
    ||    
T  1661197 ag 1661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 1663711 - 1663609
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaa-aggaggcactactcacttttcaagtcagttttgtaaggatgagt 439  Q
    |||||||||||||||||||||  ||| | |  |||||| | |||||||||||||| |||||||||| ||||| || |||| | |||||||||||||||||    
T  1663711 gggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 1663612  T
Q  440 tag 442  Q
    |||    
T  1663611 tag 1663609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 7135366 - 7135248
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||| ||||||  ||| | | ||||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  7135366 ttgtgttggctttgagggggtggatttagtcacacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 7135267  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||| ||||||||||    
T  7135266 ttttgtaaagatgagttag 7135248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 27585258 - 27585355
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | |||||||||||||||||||||||| |||||  | |||| | ||||||||||||||||||||    
T  27585258 ggatttagtcccacatcggatagataggattcttgagaagagtttataaaaaggaggcactcctcaccgtacaagccggttttgtaaggatgagttag 27585355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 39550080 - 39549983
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| ||||||||||  ||||| | |||| ||||||||||||||||||||||    
T  39550080 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcatcactgtacaagccagttttgtaaggatgagttag 39549983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 43384382 - 43384285
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  43384382 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 43384285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 39808693 - 39808602
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| ||||||||| ||||||||||||    
T  39808693 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccagttttgtgaggatgagttag 39808602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 257390 - 257272
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  | |||| | ||||||||||||| |||||||||| ||||| || | || | |    
T  257390 ttgtgttggctttgagggggtggatttagtcccacatcggatagatattattcttgagaagagtttataaagaggaggcactcctcaccttactagccgg 257291  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  257290 ttttgtaaggatgagttag 257272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 3973050 - 3973108
Alignment:
Q  258 tttgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    ||||||||||||||||| || |||||||||| | ||||||||||||||||| |||||||    
T  3973050 tttgttggaaattccgccttcattgcggtccacccctagccgcctaattgcaacatttg 3973108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 9378801 - 9378894
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||||| |||| | ||||||||| | ||||||||||||| |||||||| | ||  | || |||| | ||||||||||||||||||||||    
T  9378801 agtcccacatcgaatagataagactcttgagaagagtttataaagaggaggcaatccttgccttacaagccggttttgtaaggatgagttagac 9378894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 47346196 - 47346099
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||| ||| | | || |||| | ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  47346196 ggatttagtcccacatcagatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttag 47346099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 6783065 - 6783137
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  6783065 aagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 6783137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 43288559 - 43288631
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||| ||||||    
T  43288559 aagactcttgacaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggattagttag 43288631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 444
Target Start/End: Original strand, 34748780 - 34748879
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||| | |||||  | |||| | ||||||||||||||||||||||    
T  34748780 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtaaggatgagttagac 34748879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 35866735 - 35866644
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| ||||||||||||| | ||| |||| ||||||  || |||| | ||||||||||||||||||||    
T  35866735 agtcccacatcggatagataagactcttgataagagtttatatagagggggcaatactcaacttacaagccggttttgtaaggatgagttag 35866644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 452
Target Start/End: Complemental strand, 37531029 - 37530918
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||| ||  ||| | | || |||| | ||||||||||||| |||||||||| ||||  || |||| | |||||| |||||||||||    
T  37531029 gggtggatttagtcccacgtcggatagataggattcttgagaagagtttataaagaggaggcactcctcaacttacaagccggttttgcaaggatgagtt 37530930  T
Q  441 agactacgattt 452  Q
    || || ||||||    
T  37530929 aggctccgattt 37530918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 441
Target Start/End: Original strand, 5775890 - 5775980
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||  ||| |  |||||||| || |||||||||||| |||||||||| |||||||| ||||  |||||||| | |||||||||    
T  5775890 agtcccacatcgcatagatgagactcttaatgagagtttataaagaggaggcactcctcactttacaagctagttttgtgatgatgagtta 5775980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 411
Target Start/End: Original strand, 31149055 - 31149125
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    ||||||||||||||| |||||| ||| | ||||||||  ||||||||||| ||| |||||||||| |||||    
T  31149055 gggtggatttagtcctacatcagatagataagactctcgataagagtttacaaagaggaggcactcctcac 31149125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 411
Target Start/End: Original strand, 31167347 - 31167417
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    ||||||||||||||| |||||| ||| | ||||||||  ||||||||||| ||| |||||||||| |||||    
T  31167347 gggtggatttagtcctacatcagatagataagactctcgataagagtttacaaagaggaggcactcctcac 31167417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 444
Target Start/End: Original strand, 31374804 - 31374866
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||||    
T  31374804 aagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagac 31374866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 444
Target Start/End: Complemental strand, 36092704 - 36092602
Alignment:
Q  342 ggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||| |||||||||||||||  ||| | | || |||| | ||||||||||| | |||||||||| ||||| || ||||   |||||||||||||||||||    
T  36092704 ggtgtatttagtcccacatcggatagataggattcttgagaagagtttatagagaggaggcactcctcaccttacaagctggttttgtaaggatgagtta 36092605  T
Q  442 gac 444  Q
    |||    
T  36092604 gac 36092602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 438
Target Start/End: Original strand, 36237831 - 36237897
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgag 438  Q
    ||||||| ||||||||||||||| |||||||||| ||| | || |||| | ||||||||||||||||    
T  36237831 gactcttgataagagtttataaagaggaggcactcctctccttacaagccggttttgtaaggatgag 36237897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 36270760 - 36270702
Alignment:
Q  384 gagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||| |||||||||| |||||| | |||| | ||||||||||||||||||||    
T  36270760 gagtttataaagaggaggcactcctcactgtacaagccggttttgtaaggatgagttag 36270702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 23396822 - 23396915
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||| || ||| | ||||||||| |||||||| |||||| |||||||| |  |||  || |||| | ||||||||||||||||||||||    
T  23396822 agtcccacaacatatagataagactcttgataagagtatataaagaggaggcaatcatcaacttacaagccggttttgtaaggatgagttagac 23396915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 36492618 - 36492553
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatga 437  Q
    ||||||| |||| |||||||||| |||||||||| ||||| ||  ||| |||||||||||||||||    
T  36492618 gactcttgataaaagtttataaagaggaggcactcctcaccttaaaagccagttttgtaaggatga 36492553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 40121741 - 40121624
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||| |||||||  ||| | |  |||||| | ||||||||||| | |||||||||| |||||  | |||| | |    
T  40121741 ttgtgttggctttgagggggtggatttagttccacatcggatagatagtactcttgagaagagtttatagagaggaggcactcctcaccctacaagccgg 40121642  T
Q  424 ttttgtaaggatgagtta 441  Q
    ||||||||||||||||||    
T  40121641 ttttgtaaggatgagtta 40121624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 438
Target Start/End: Original strand, 41670585 - 41670678
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgag 438  Q
    ||||||||||||||||| |||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||    ||||||||||||||||    
T  41670585 ggatttagtcccacatcgaatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaaactggttttgtaaggatgag 41670678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 14991574 - 14991514
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| |||||||||| |||||  | ||||||  |||||||||||||||||||    
T  14991574 aagagtttataaagaggaggcactcctcaccgtacaagtcgattttgtaaggatgagttag 14991514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 15421185 - 15421125
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| |||||||||| |||||  | ||||||  |||||||||||||||||||    
T  15421185 aagagtttataaagaggaggcactcctcaccgtacaagtcgattttgtaaggatgagttag 15421125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 16564902 - 16564962
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||  ||| | ||||||||| ||||||||||||||| |||||||||| |||||    
T  16564902 agtcccacatcggatagataagactcttaataagagtttataaataggaggcactcctcac 16564962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 16565106 - 16565166
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||  ||| | ||||||||| ||||||||||||||| |||||||||| |||||    
T  16565106 agtcccacatcggatagataagactcttgataagagtttataaataggaggcactcctcac 16565166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 16600556 - 16600496
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||  ||| | ||||||||| ||||||||||||||| |||||||||| |||||    
T  16600556 agtcccacatcggatagataagactcttgataagagtttataaataggaggcactcctcac 16600496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 16600760 - 16600700
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||  ||| | ||||||||| ||||||||||||||| |||||||||| |||||    
T  16600760 agtcccacatcggatagataagactcttaataagagtttataaataggaggcactcctcac 16600700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 7135458 - 7135399
Alignment:
Q  258 tttgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    |||||||||||||||||||| |||||||||||| ||||| | ||| ||||||||| ||||    
T  7135458 tttgttggaaattccgctttaattgcggtccgcccctagtcacctaaattgcgacctttg 7135399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 21034022 - 21033975
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattg 307  Q
    ||||||||||||||| || |||||||||||| ||||||| ||||||||    
T  21034022 tgttggaaattccgccttcattgcggtccgcccctagccacctaattg 21033975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 34590555 - 34590626
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    ||||||||| ||||||||||||||| |||||||||| ||||| ||   |  | |||||||||||||||||||    
T  34590555 aagactcttcataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagtta 34590626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 442
Target Start/End: Complemental strand, 36092496 - 36092397
Alignment:
Q  343 gtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||||||||   ||| | | || |||| | ||||||||||| | |||||| ||| ||||| || |||| | ||||||||||||||||||||    
T  36092496 gtggatttagtcccacattggatagatatgattcttgagaagagtttatagagaggaggtactcctcaccttacaagccggttttgtaaggatgagttag 36092397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 463
Target Start/End: Complemental strand, 40137771 - 40137681
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagactacgatttgaacatggtat 463  Q
    ||||||| ||||||||||||||| | ||| |||| ||||| || | || | |||||||||||||||||||| |  |||||| ||||||||||    
T  40137771 gactcttaataagagtttataaagaagagacactcctcaccttacgagccggttttgtaaggatgagttaggc-ccgatttcaacatggtat 40137681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 40703475 - 40703416
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||||| ||||| |  |||| | ||||||||||||||||||||    
T  40703475 agagtttataaagaggaggcactcctcacctcacaagccggttttgtaaggatgagttag 40703416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 40703748 - 40703657
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||| |||| |  |||||||| || ||| |||||||| ||||| |||| ||||| |  |||| | ||||||||||||||||||||    
T  40703748 agtcccacatcgaataaatgagactcttgatgagactttataaagaggagacactcctcacctcacaagccggttttgtaaggatgagttag 40703657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 43168108 - 43168049
Alignment:
Q  258 tttgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    ||||||||||||||||| || |||||||||||| ||||| ||||| ||||||||| ||||    
T  43168108 tttgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttg 43168049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 12305266 - 12305212
Alignment:
Q  262 ttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    ||||||||||||| |||||||||||| || | |||| ||||||||||| ||||||    
T  12305266 ttggaaattccgcctttattgcggtctgcccttagctgcctaattgcggcatttg 12305212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 40703955 - 40703865
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||  ||| |  |||||||| || |||||||||||| ||||| |||| ||||| |  |||||| | |||||||||||||||||    
T  40703955 agtcccacatcggatagatgagactcttgatgagagtttataaagaggagacactcctcacctcacaagtcggatttgtaaggatgagtta 40703865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 257480 - 257423
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    ||||||||||||||| || |||||||||||| ||||| ||||| ||||||||| ||||    
T  257480 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttg 257423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 304
Target Start/End: Original strand, 28909922 - 28909967
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    |||||||||||||||| ||||||| ||||||| ||||| |||||||    
T  28909922 ttgttggaaattccgcctttattgtggtccgcccctagtcgcctaa 28909967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 33909139 - 33909236
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| ||||  |||| |||||| | |||| | |||||||| |||||||||||    
T  33909139 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggatacactcctcactgtacaagccggttttgtatggatgagttag 33909236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 36495891 - 36495988
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | || |||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  36495891 ggatttagtcccacatcggatagataggattcttgagaatagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttag 36495988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 43168016 - 43167899
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||||| |||  ||| | |  |||||| | ||||||||||||| |||||||| | ||||| ||   || | |    
T  43168016 ttgtgttggctttgagggggtggatttagtcccaaatcggatagatagcactcttgagaagagtttataaagaggaggcaatcctcaccttatgagccgg 43167917  T
Q  424 ttttgtaaggatgagtta 441  Q
    ||||||||||||||||||    
T  43167916 ttttgtaaggatgagtta 43167899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 439
Target Start/End: Complemental strand, 43384011 - 43383954
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagt 439  Q
    ||||||||||||| |||||||||||||| | || |||  | |||||||||||||||||    
T  43384011 aagagtttataaagaggaggcactactccccttacaaaccggttttgtaaggatgagt 43383954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 47346425 - 47346328
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  | | | | || |||| | ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  47346425 ggatttagtcccacatcggaaagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttag 47346328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 4258077 - 4258005
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| |||||||||||| || |||||||||| ||||| ||   |  ||||||| ||||||||||||||    
T  4258077 aagactcttgataagagtttatcaataggaggcactcctcaccttatgaaccagttttttaaggatgagttag 4258005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 403
Target Start/End: Original strand, 8681892 - 8681944
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggca 403  Q
    |||||||||||| ||| | ||||||||| ||||||||||||||| | ||||||    
T  8681892 agtcccacatcagatagataagactcttgataagagtttataaagaagaggca 8681944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 432
Target Start/End: Original strand, 14691109 - 14691161
Alignment:
Q  380 ataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaag 432  Q
    ||||||||||||||| ||||| |||| ||||| || |||| ||||||||||||    
T  14691109 ataagagtttataaagaggagacactcctcaccttacaagccagttttgtaag 14691161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 445
Target Start/End: Original strand, 19843709 - 19843809
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||||||| |||| ||| | | || |||| | ||||||||||||| || | ||||| |||||  | |||| |  |||||||||||||||||||||    
T  19843709 ggatttagtcccaaatcagatagataggattcttgagaagagtttataaagagaaagcactcctcaccgtacaagacgattttgtaaggatgagttagac 19843808  T
Q  445 t 445  Q
    |    
T  19843809 t 19843809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 23396636 - 23396708
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | |||||| |||||| | |||||| | ||||| || |||| | ||||||||||||||||||||    
T  23396636 aagactcttgagaagagtatataaagatgaggcaatcctcaccttacaagccggttttgtaaggatgagttag 23396708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 23721035 - 23721091
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    ||||||||||||| | |||| |||||||| | ||||||| |||||||||| ||||||    
T  23721035 tgttggaaattccacctttaatgcggtcctcccctagccacctaattgcggcatttg 23721091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 29252603 - 29252675
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||| | ||||||||||    
T  29252603 aagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtgatgatgagttag 29252675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 32663038 - 32662990
Alignment:
Q  6 aaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaaca 54  Q
    ||||||||||| ||||||||||||  |||||| |||||| |||||||||    
T  32663038 aaagagtaaaactgaatgaacaaactctatcgtacaaaacggctaaaca 32662990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 33909345 - 33909405
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| ||||| |||| |||||| | |||| | |||||||| |||||||||||    
T  33909345 aagagtttataaagaggagacactcctcactgtacaagccggttttgtatggatgagttag 33909405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 35021777 - 35021729
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgc 308  Q
    |||||||||| | ||||| ||||| |||||| |||||||||||||||||    
T  35021777 tgttggaaatcctgctttcattgcagtccgcccctagccgcctaattgc 35021729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 39808541 - 39808469
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| |||||||| | ||||| ||  ||| | ||||||| ||||||||||||    
T  39808541 aagactcttgagaagagtttataaagaggaggcaatcctcaccttaaaagccggttttgtgaggatgagttag 39808469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 40121831 - 40121787
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||    
T  40121831 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 40121787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 47856085 - 47856033
Alignment:
Q  353 tcccacatcaaatataaaagactctttataagagtttataaaaaggaggcact 405  Q
    |||||||||  ||| | ||||||||| ||||||||||||||| ||||||||||    
T  47856085 tcccacatcggatagataagactcttgataagagtttataaagaggaggcact 47856033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 4e-39; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 260 - 442
Target Start/End: Original strand, 34248276 - 34248458
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtcccaca 359  Q
    ||||||||||||||| ||||||||  ||||| ||||| ||||||||||||||||||||| || |||||| ||| |||||  |||||||||||||||||||    
T  34248276 tgttggaaattccgcctttattgcaatccgcccctagtcgcctaattgcgacatttgagttgccttgtgttggctttgagggggtggatttagtcccaca 34248375  T
Q  360 tcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |    || | | ||||||| ||||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  34248376 ttggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 34248458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 442
Target Start/End: Original strand, 34248033 - 34248176
Alignment:
Q  300 cctaattgcgacatttgaggtgtcttgtgctggttttgaaaggg-tggatttagtcccacatcaaatataaaagactctttataagagtttataaaaagg 398  Q
    ||||||||||||||||||| || |||||| ||| |||||  ||| ||||||||||||||||||   || | | ||||||| ||||||||||||||| |||    
T  34248033 cctaattgcgacatttgagttgccttgtgttggctttgaggggggtggatttagtcccacatcggttagataggactcttgataagagtttataaagagg 34248132  T
Q  399 aggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| ||||| || |||| | ||||||||||||||||||||    
T  34248133 aggcactcctcaccttacaagccggttttgtaaggatgagttag 34248176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 18905837 - 18905955
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  18905837 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 18905936  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  18905937 ttttgtaaggatgagttag 18905955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 32931399 - 32931500
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | |  | |||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  32931399 gggtggatttagtcccacatcggatagatatcattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 32931498  T
Q  441 ag 442  Q
    ||    
T  32931499 ag 32931500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 442
Target Start/End: Original strand, 36997196 - 36997265
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| ||||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  36997196 actcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 36997265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 17607279 - 17607219
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| ||||||||||||||||  | |||| ||||||||||||||||||||||    
T  17607279 aagagtttataaagaggaggcactactcaccgtacaagccagttttgtaaggatgagttag 17607219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 10989130 - 10989039
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||  || | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  10989130 agtcccacatcaggtagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 10989039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 10989337 - 10989246
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  10989337 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 10989246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 43599319 - 43599410
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  43599319 agtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 43599410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 15011125 - 15011035
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | |||||||||||||||||||    
T  15011125 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 15011035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 21085271 - 21085153
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || ||||   |    
T  21085271 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagctgg 21085172  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||| ||||||||||    
T  21085171 ttttgtaatgatgagttag 21085153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 466
Target Start/End: Original strand, 21653325 - 21653451
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | |   ||||| | ||||||||||| | |||||||||| ||||| || |||| | ||||||||||||||||||    
T  21653325 gggtggatttagtcccacatcggatagatagtgctcttgagaagagtttatatagaggaggcacttctcaccttacaagccggttttgtaaggatgagtt 21653424  T
Q  441 agactac-gatttgaacatggtatcag 466  Q
    || || |  |||| |||||||||||||    
T  21653425 aggctccaaatttcaacatggtatcag 21653451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 33435891 - 33435984
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | ||||||||| ||||||||||||| ||||||| || | ||||| || |||| | ||||||||| ||||||||||||    
T  33435891 agtcccacatcggatagataagactcttgataagagtttatataaaggagacaatcctcaccttacaagccggttttgtaaagatgagttagac 33435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 36039870 - 36039797
Alignment:
Q  371 agactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||| || |||||||||||| |||| ||||||||||| |  |||| | ||||||||||||||||||||||    
T  36039870 agactcttgatgagagtttataaagaggatgcactactcacctcacaagccggttttgtaaggatgagttagac 36039797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 42228779 - 42228872
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| |  |||||||||||||||||||||    
T  42228779 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccgattttgtaaggatgagttagac 42228872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 12941610 - 12941658
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaa 431  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||    
T  12941610 agagtttataaaaaggaggtactactcactttgcaagtcggttttgtaa 12941658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 441
Target Start/End: Original strand, 22277522 - 22277622
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    ||||| |||||||||||||||  ||||| || | | |  | ||||||||||||| ||||| |||||||||| || |||| | ||||||||||||||||||    
T  22277522 gggtgaatttagtcccacatcggatatataacattatcgagaagagtttataaagaggagacactactcaccttacaagccggttttgtaaggatgagtt 22277621  T
Q  441 a 441  Q
    |    
T  22277622 a 22277622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 8559589 - 8559680
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  8559589 agtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 8559680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 18313792 - 18313883
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | |||||||||  ||| |||||||| | |||||||| | ||||| ||||||||  ||||||||||||||||||||    
T  18313792 agtcccacatcggatagataagactcttgttaaaagtttatatagaggaggcaatcctcacctttcaagtaggttttgtaaggatgagttag 18313883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 444
Target Start/End: Original strand, 33435709 - 33435780
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||| ||||||||||||| ||||||| || | ||||  || |||||| ||||||||||||||||||||||    
T  33435709 actcttgataagagtttatataaaggagacaatcctcatcttacaagtcggttttgtaaggatgagttagac 33435780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 406
Target Start/End: Complemental strand, 23027628 - 23027546
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcacta 406  Q
    ||||| ||| |||||  |||||||||||||||||||||| ||| | |  |||||| | ||||||||||||| |||||||||||    
T  23027628 ttgtgttggctttgagggggtggatttagtcccacatcagatagatagaactcttgagaagagtttataaagaggaggcacta 23027546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 39124961 - 39125023
Alignment:
Q  380 ataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||||| |||||||||| ||||  || |||| |||||||||||| |||||||||    
T  39124961 ataagagtttataaagaggaggcactcctcatcttacaagccagttttgtaagaatgagttag 39125023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 39590593 - 39590647
Alignment:
Q  262 ttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    |||||||||| || | ||||||||||||| |||||||||||||||||| ||||||    
T  39590593 ttggaaattctgcctctattgcggtccgcccctagccgcctaattgcggcatttg 39590647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 21653802 - 21653903
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | |   ||||| | || |||||||| | |||||||||| ||||| || |||| | ||||||||||||||||||    
T  21653802 gggtggatttagtcccacatcggatagatagtgctcttgagaaaagtttatacagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 21653901  T
Q  441 ag 442  Q
    ||    
T  21653902 ag 21653903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 35561674 - 35561767
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | |||| |||| | ||||||||||||| |||||||| | ||||| || || | | ||||||||||||||||||||||    
T  35561674 agtcccacatcggatagataagattcttgagaagagtttataaagaggaggcaatcctcaccttgcatgccggttttgtaaggatgagttagac 35561767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 36037218 - 36037291
Alignment:
Q  371 agactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||| || |||||||||||| |||| ||||| ||||| |  |||| | ||||||||||||||||||||||    
T  36037218 agactcttgatgagagtttataaagaggatgcactcctcacctcacaagccggttttgtaaggatgagttagac 36037291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 3184120 - 3184072
Alignment:
Q  256 tttttgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||| ||||||||| ||||||||||||||| ||||| |||||||    
T  3184120 tttttgttgtaaattccgcctttattgcggtccgcccctagtcgcctaa 3184072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 16454712 - 16454640
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  16454712 aagactcttaagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 16454640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 40902470 - 40902398
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||| ||||||    
T  40902470 aagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggataagttag 40902398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 15010917 - 15010826
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||| |||||||| |||||||| | ||||| || |||| | ||||| ||||||||||||||    
T  15010917 agtcccacatcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcaccttacaagccggttttataaggatgagttag 15010826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 18905746 - 18905793
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcctaatt 306  Q
    |||||||||||||||| || |||||||||||| ||||| |||||||||    
T  18905746 ttgttggaaattccgccttaattgcggtccgcccctagtcgcctaatt 18905793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 20760756 - 20760665
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| | |||||| | ||||| || |||  | ||||||||||||||||||||    
T  20760756 agtcccacatcggatagacaagactcttgagaagagtttataaagatgaggcaatcctcaccttacaaaccggttttgtaaggatgagttag 20760665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 30176560 - 30176469
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| |  |||||||| || |||||||||||| ||||||||||  |||| |  |||| | ||||||||||||||||||||    
T  30176560 agtcccacatcggatagacgagactcttgatgagagtttataaagaggaggcactcttcacctcacaagccggttttgtaaggatgagttag 30176469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 43984380 - 43984321
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||||| |||||  | |||| | ||||||||||||||||||||    
T  43984380 agagtttataaagaggaggcactcctcaccatacaagccggttttgtaaggatgagttag 43984321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 3183986 - 3183916
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||| ||||||||||    
T  3183986 gactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaacgatgagttag 3183916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 20298639 - 20298521
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||||||||   ||| | |  | |||| | ||||||||||||| |||||||||| ||||| || ||||   |    
T  20298639 ttgtgttggctttgagggggtggatttagtcccacatttgatagatattattcttgagaagagtttataaagaggaggcactcctcaccttacaagctgg 20298540  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||| ||||||||||    
T  20298539 ttttgtaatgatgagttag 20298521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 27402602 - 27402544
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgag 318  Q
    ||||||||||||||| |||| |||| ||||| ||||| | |||| ||||||||||||||    
T  27402602 tgttggaaattccgcctttagtgcgatccgcccctagtcacctacttgcgacatttgag 27402544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 32931296 - 32931354
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    |||||||||||||||| || |||||||||||| ||||| ||||| ||||||||| ||||    
T  32931296 ttgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttg 32931354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 5496569 - 5496662
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||||||| |  |||||||| || | |||||||||| |||||||||| || ||||  ||||   ||||||| | ||||||||||||    
T  5496569 agtcccacatcaaatagacgagactcttgatgaaagtttataaagaggaggcactccttacttcacaagctggttttgtgatgatgagttagac 5496662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 9596053 - 9595996
Alignment:
Q  387 tttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||| |||||||||| |||||  | |||||| | ||||||||||||||||||||    
T  9596053 tttataaagaggaggcactcctcacagtacaagtcggctttgtaaggatgagttagac 9595996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 14019810 - 14019907
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | |  |||| | ||||||||||||| |||||||||| |||||    |||| | ||||||||||||||||||||    
T  14019810 ggatttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgaacaagccggttttgtaaggatgagttag 14019907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 15711498 - 15711595
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||||| |||||  | |||| | ||||| || |||||||||||    
T  15711498 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagcctgttttatagggatgagttag 15711595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 304
Target Start/End: Original strand, 21653216 - 21653261
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    |||||||||||||||| || |||||||||||| ||||| |||||||    
T  21653216 ttgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 21653261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 304
Target Start/End: Original strand, 36997056 - 36997101
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    |||||||||||||||| || |||||||||||| ||||| |||||||    
T  36997056 ttgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 36997101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 38886988 - 38887049
Alignment:
Q  255 atttttgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    |||| ||||||||||||| | || ||||| |||| | |||||||||||||||||| ||||||    
T  38886988 atttgtgttggaaattcctccttcattgctgtccacccctagccgcctaattgcggcatttg 38887049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 442
Target Start/End: Complemental strand, 39588146 - 39588089
Alignment:
Q  385 agtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||| |||||||||| ||||| ||  ||| | ||||||||||||||||||||    
T  39588146 agtttataaagaggaggcactcctcaccttataagccggttttgtaaggatgagttag 39588089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 770425 - 770338
Alignment:
Q  1 taggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagc 91  Q
    |||||||| |||||||||||||  |||||| |||||| |   || |||||||||||||||   ||||||||  |||| |||||||||||||    
T  770425 taggcaaatagtaaaattgaatagacaaagtctatcgta---aacggctaaacagaaacaccaaaggcagaattgaaattgaagtagcagc 770338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 443
Target Start/End: Complemental strand, 26122840 - 26122748
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttaga 443  Q
    |||||||||||  ||| |  |||||||| || |||||||||||| |||| ||| | ||||| || |||||  ||||| |||||||||||||||    
T  26122840 agtcccacatcggatagatgagactcttgatgagagtttataaagaggatgcaatcctcacattacaagttggttttataaggatgagttaga 26122748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 35561485 - 35561557
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| |||||| | | ||||| ||  ||| | ||||||||||||||||||||    
T  35561485 aagactcttgagaagagtttataaagaggaggtaatcctcaccttgtaagccggttttgtaaggatgagttag 35561557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 35908717 - 35908777
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| || ||||||| |||||  | |||| | ||||||||||||||||||||    
T  35908717 aagagtttataaagagaaggcactcctcaccgtacaagccggttttgtaaggatgagttag 35908777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 36994004 - 36993952
Alignment:
Q  390 ataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  36994004 ataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 36993952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 38288029 - 38287969
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| ||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  38288029 aagagtttataaagaggagacactactcaccgtacaagctggttttgtaaggatgagttag 38287969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 9e-28; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 4351788 - 4351620
Alignment:
Q  3 ggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcggaggnnnnnn 102  Q
    |||||||| ||||||||||| |||||||  |||   |||||||||||||| ||||| || |||||||||||| ||||||||||||||||| |||          
T  4351788 ggcaaagattaaaattgaatcaacaaagtatatgatacaaaatggctaaaaagaaaaatcgaaggcagacctaaatttgaagtagcagcgcaggaacaaa 4351689  T
Q  103 ncttacataaacaaaacacataatgcagtgtaacacacaccgacagccacg-aagaaaaagctccctca 170  Q
     ||||||||||||||||| | ||||| | ||||||||||| ||| |||||| || ||||||||||||||    
T  4351688 acttacataaacaaaacaaacaatgccgcgtaacacacactgactgccacgaaaaaaaaagctccctca 4351620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 442
Target Start/End: Original strand, 38663164 - 38663346
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtcccaca 359  Q
    ||||||||||| | | | ||||||| || || || || ||||||||||||||||||||| || || ||| ||| |||||  |||||||||||||||||||    
T  38663164 tgttggaaatttcacctctattgcgatctgcccccagtcgcctaattgcgacatttgagttgcctcgtgttggctttgagggggtggatttagtcccaca 38663263  T
Q  360 tcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||   | | | ||||||| ||||||||||||||| ||||||||||  |||| || |||| | ||||||||||||||||||||    
T  38663264 tcagtaagataggactcttgataagagtttataaagaggaggcactcgtcaccttacaagccggttttgtaaggatgagttag 38663346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 298 - 442
Target Start/End: Original strand, 29432367 - 29432511
Alignment:
Q  298 cgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaag 397  Q
    ||||||||||||||||||||| || || ||| ||| |||||  ||||||||||||||||||||    || | | ||||||| ||||||||||||||| ||    
T  29432367 cgcctaattgcgacatttgagttgcctcgtgttggctttgagggggtggatttagtcccacattggttagataggactcttgataagagtttataaagag 29432466  T
Q  398 gaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||| ||||| || |||| | ||||||||||||||||||||    
T  29432467 gaggcacttctcaccttacaagccggttttgtaaggatgagttag 29432511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 20720646 - 20720553
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||| ||| | |||| |||| |||||||||| ||||||||||||||| |||||||| |||| | ||||||||||||||||||||||    
T  20720646 agtcccacatcagatagataagattcttgataagagtttgtaaaaaggaggcactcctcactttacaagccggttttgtaaggatgagttagac 20720553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 13413592 - 13413683
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  13413592 agtcccacatcaaatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 13413683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 13843678 - 13843796
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||| ||| | |  |||||| | ||||||||||||| ||||||| || ||||| || |||| | |    
T  13843678 ttgtgttggctttgagggggtggatttagtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcgctcctcaccttacaagccgg 13843777  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  13843778 ttttgtaaggatgagttag 13843796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 13843994 - 13844112
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||  | |    
T  13843994 ttgtgttggctttgagggggtggatttagtcccacatctgatagatagtactcttgagaagagtttataaagaggaggcacttctcaccttacaaaacgg 13844093  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  13844094 ttttgtaaggatgagttag 13844112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 37995757 - 37995639
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||| | ||||| || |||| | |    
T  37995757 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcattcctcaccttacaagccgg 37995658  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  37995657 ttttgtaaggatgagttag 37995639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 24918200 - 24918260
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| |||||||||||||||| || |||| | ||||||||||||||||||||    
T  24918200 aagagtttataaagaggaggcactactcaccttacaagccggttttgtaaggatgagttag 24918260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 24994108 - 24994168
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| |||||||||||||||| || |||| | ||||||||||||||||||||    
T  24994108 aagagtttataaagaggaggcactactcaccttacaagccggttttgtaaggatgagttag 24994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 48200 - 48109
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  48200 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 48109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 35527084 - 35526993
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  35527084 agtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 35526993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 442
Target Start/End: Original strand, 38131764 - 38131863
Alignment:
Q  343 gtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||||  ||| | | ||||||| | ||||||||||||| ||||| || | ||||| || |||| | ||||||||||||||||||||    
T  38131764 gtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggagacattcctcaccttacaagccggttttgtaaggatgagttag 38131863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 40169137 - 40169046
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  40169137 agtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaattctcaccttacaagccggttttgtaaggatgagttag 40169046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 873819 - 873701
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | | ||||||| | ||||||||||| | |||||||| | ||||| || ||||   |    
T  873819 ttgtgttggctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttatagagaggaggcattcctcaccttacaagcagg 873720  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  873719 ttttgtaaggatgagttag 873701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 4296746 - 4296668
Alignment:
Q  366 ataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||| |||||||| | |||||| |||||| |||||||| | ||||| || ||||||||||| |||||||||||||||||    
T  4296746 ataagagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagtcagtttggtaaggatgagttagac 4296668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 84136 - 84039
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||||| | || |||| | ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  84136 ggatttagtcccacatcggatatataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttag 84039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 441
Target Start/End: Original strand, 27760056 - 27760173
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | | ||||||| | |||||||| |||| | |||||||| ||||| || |||| | |    
T  27760056 ttgtgttggctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttctaaagaagaggcactcctcaccttacaagccgg 27760155  T
Q  424 ttttgtaaggatgagtta 441  Q
    |||||||||| |||||||    
T  27760156 ttttgtaaggttgagtta 27760173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 443
Target Start/End: Complemental strand, 2908658 - 2908566
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttaga 443  Q
    |||||||||||  ||| | ||||||||| | || |||||||||| |||||||| | ||||| || |||| | |||||||||||||||||||||    
T  2908658 agtcccacatcggatagacaagactcttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaga 2908566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 441
Target Start/End: Complemental strand, 32395416 - 32395320
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||||| |||||| | |||| | |||||||| ||||||||||    
T  32395416 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcactgtacaagccggttttgtatggatgagtta 32395320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 437
Target Start/End: Original strand, 33040065 - 33040157
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatga 437  Q
    |||||||||| |||||| |||||| | || |||| | ||||||||||| | |||||||||| ||||| || |||| | |||||||||||||||    
T  33040065 ggatttagtctcacatcgaatatataggattcttgaaaagagtttatatagaggaggcactcctcaccttacaagccggttttgtaaggatga 33040157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 466
Target Start/End: Original strand, 36878334 - 36878450
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagactac-ga 449  Q
    |||||||||||| ||| | |||||| || ||||||||||||||| ||||| || | ||||| || |||| || |||||||||||||| |||| || |  |    
T  36878334 agtcccacatcagatagataagacttttgataagagtttataaacaggagacaatcctcaccttacaagccaattttgtaaggatgatttaggcttcaaa 36878433  T
Q  450 tttgaacatggtatcag 466  Q
    ||| |||||||||||||    
T  36878434 tttcaacatggtatcag 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 2908865 - 2908774
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| ||| | |||||| || | || |||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  2908865 agtcccacatcagatagacaagacttttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 2908774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 28358131 - 28358040
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| ||||| || | ||||| || |||| | ||||||||||||||||||||    
T  28358131 agtcccacatcggatagacaagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaaggatgagttag 28358040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 34457311 - 34457402
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||| ||| | ||||| || |||| | ||||||||||||||||||||    
T  34457311 agtcccacatcggatagacaagactcttgagaagagtttataaagaggatgcaattctcaccttacaagccggttttgtaaggatgagttag 34457402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 38376739 - 38376830
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| ||||| || | ||||| || |||| | ||||||||||||||||||||    
T  38376739 agtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaaggatgagttag 38376830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 43490559 - 43490468
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| || || || ||||||| || |||| | ||||||||||||||||||||    
T  43490559 agtcccacatcggatagacaagactcttgagaagagtttataaagagaagacaatactcaccttccaagccggttttgtaaggatgagttag 43490468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 1028216 - 1028098
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||  | |    
T  1028216 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaaaccgg 1028117  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||| | ||||||||||    
T  1028116 ttttgtgacgatgagttag 1028098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 2716575 - 2716645
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| ||||||||||||||  |||||||||| ||||| ||  ||| | ||||||||||||||||||||    
T  2716575 gactcttgataagagtttataaggaggaggcactcctcaccttataagccggttttgtaaggatgagttag 2716645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 3762915 - 3763005
Alignment:
Q  352 gtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| |  |||| || |||| | ||||||||||||||||||||    
T  3762915 gtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcttcaccttacaagccggttttgtaaggatgagttag 3763005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 20720422 - 20720361
Alignment:
Q  380 ataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    ||||||||||||||| || ||||||| |||||||| |||  || ||||||||||||||||||    
T  20720422 ataagagtttataaagagaaggcactcctcactttacaaaccaattttgtaaggatgagtta 20720361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 22196428 - 22196331
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| |||||  |  ||| | ||||||||||||||||||||    
T  22196428 ggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccgtaaaagccggttttgtaaggatgagttag 22196331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 22196655 - 22196558
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | ||||||| | ||||||||||||| ||||| ||||  ||||  | |||| | ||||||||||||||||||||    
T  22196655 ggatttagtcccacatcggatagatatgactcttgagaagagtttataaagaggagacactcatcaccgtacaagccggttttgtaaggatgagttag 22196558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 29396445 - 29396348
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||| ||| | | || |||| | || |||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  29396445 ggatttagtcccacatcagatagataggaatcttgagaaaagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttag 29396348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 48388 - 48316
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | || |||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  48388 aagactcttgagaaaagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 48316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 440
Target Start/End: Original strand, 20811435 - 20811551
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||| ||  ||| | || |||||| | |||| |||||||| |||||||||| | ||| || |||| | |    
T  20811435 ttgtgttggctttgagggggtggatttagtcccacttcggatagataacactcttgagaagattttataaagaggaggcactccacaccttacaagccgg 20811534  T
Q  424 ttttgtaaggatgagtt 440  Q
    |||||||| ||||||||    
T  20811535 ttttgtaatgatgagtt 20811551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 440
Target Start/End: Original strand, 20837790 - 20837906
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||| ||  ||| | || |||||| | |||| |||||||| |||||||||| | ||| || |||| | |    
T  20837790 ttgtgttggctttgagggggtggatttagtcccacttcggatagataacactcttgagaagattttataaagaggaggcactccacaccttacaagccgg 20837889  T
Q  424 ttttgtaaggatgagtt 440  Q
    |||||||| ||||||||    
T  20837890 ttttgtaatgatgagtt 20837906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 34457123 - 34457195
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| |||| ||| | ||||| || |||| | ||||||||||||||||||||    
T  34457123 aagactcttgagaagagtttataaagaggatgcaatcctcaccttacaagccggttttgtaaggatgagttag 34457195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 37656809 - 37656737
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  37656809 aagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 37656737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 39268026 - 39268086
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||  ||| | ||||||||| ||||||||||||||| |||||||||| |||||    
T  39268026 agtcccacatcggatagataagactcttgataagagtttataaataggaggcactcctcac 39268086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 12965310 - 12965251
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||| ||||| ||||| || |||| | ||||||||||||||||||||    
T  12965310 agagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttag 12965251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 444
Target Start/End: Original strand, 18107843 - 18107934
Alignment:
Q  353 tcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||| |||  | ||||||||| |||||| |||||||| |||||||||| ||||| ||  ||  | ||||||||||||||| ||||||    
T  18107843 tcccacatcgaatcgataagactcttgataagaatttataaagaggaggcactcctcaccttataaaccggttttgtaaggatgaattagac 18107934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 1892165 - 1892095
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| || ||| |||||||| ||||||| || ||||| || |||| | ||||||||||||||||||||    
T  1892165 gactcttgatgagaatttataaagaggaggccctcctcaccttacaagccggttttgtaaggatgagttag 1892095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 444
Target Start/End: Original strand, 24125089 - 24125163
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||| | |||||| |||||| |||||| | | ||||| || |||| | ||||||||||||||||||||||    
T  24125089 aagactcttgagaagagtatataaagaggaggtaatcctcaccttacaagccggttttgtaaggatgagttagac 24125163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 30587959 - 30588017
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgag 318  Q
    |||||||||||| || ||||||||| ||| | ||||| |||| ||||||||||||||||    
T  30587959 tgttggaaattctgcctttattgcgatccacccctagtcgcccaattgcgacatttgag 30588017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 83912 - 83816
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||||| | || |||| | || |||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  83912 ggatttagtcccacatcggatatataggattcttgagaaaagtttataaagaggaggcact-ctcaccgtacaagccggttttgtatggatgagttag 83816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 440
Target Start/End: Original strand, 11632439 - 11632528
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| | |||||| | ||||| ||  ||| | ||||||||||||||||||    
T  11632439 agtcccacatcggatagacaagactcttgagaagagtttataaagatgaggcaatcctcaccttataagccggttttgtaaggatgagtt 11632528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 304
Target Start/End: Complemental strand, 12595317 - 12595272
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    |||||||||||||||| || |||||||||||| ||||| |||||||    
T  12595317 ttgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 12595272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 27760419 - 27760476
Alignment:
Q  387 tttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||| | |||||||| ||||| || |||| | ||||||||||||||||||||||    
T  27760419 tttataaagaagaggcactcctcaccttccaagccggttttgtaaggatgagttagac 27760476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 30329838 - 30329935
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||| ||| |||||  | |||||| |||||||| |||| ||||||    
T  30329838 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggaactcctcaccgtacaagtcggttttgtatggatcagttag 30329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 30588258 - 30588209
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcg 309  Q
    ||||||||||||||| || |||||||||||| ||| |||| |||||||||    
T  30588258 tgttggaaattccgccttaattgcggtccgccccttgccggctaattgcg 30588209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 32501219 - 32501312
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | ||||||||| |||||||||| |||||||||| || |  |||||||  || || ||||||||| ||| ||||||||    
T  32501219 agtcccacatcggatagataagactcttgataagagtttgtaaaaaggagacattcgtcactttataaatctgttttgtaaagataagttagac 32501312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 439
Target Start/End: Original strand, 395399 - 395463
Alignment:
Q  375 tctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagt 439  Q
    |||| ||||||||||||||| |||||||||| || || || || ||| |||||||||| ||||||    
T  395399 tcttgataagagtttataaataggaggcactcctaaccttacatgtcggttttgtaagaatgagt 395463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 401
Target Start/End: Original strand, 396258 - 396318
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggagg 401  Q
    ||||||||||||||||||||  |||| | | ||||||| |||||| |||||||| ||||||    
T  396258 gggtggatttagtcccacattgaatagataggactcttgataagactttataaagaggagg 396318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 2471758 - 2471698
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  2471758 aagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttag 2471698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 405
Target Start/End: Complemental strand, 4464988 - 4464924
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcact 405  Q
    |||||||||||||||||| |    || ||| ||||||| ||||||||||||||| ||||||||||    
T  4464988 gggtggatttagtcccacgtttgttagaaaggactcttgataagagtttataaagaggaggcact 4464924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 10668368 - 10668428
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||||||| | || |||||| ||||||||||| ||| ||||| |||| |||||    
T  10668368 agtcccacatcaaatagataaaactcttgataagagtttacaaagaggagacactcctcac 10668428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 13843588 - 13843632
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||    
T  13843588 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 13843632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 17135527 - 17135587
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||  ||| | ||||||||| ||||||||||||||| ||||| |||| |||||    
T  17135527 agtcccacatcggataaataagactcttgataagagtttataaagaggagacactcctcac 17135587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 18914238 - 18914166
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | || |||||||||||||||| || | ||||| || |||||  |||||||||| |||||||||    
T  18914238 aagactcttgagaaaagtttataaaaaggagacaatcctcaccttacaagttggttttgtaagaatgagttag 18914166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 31973337 - 31973281
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    |||||||||||| || || ||||| |||||| || ||||||||||||||| ||||||    
T  31973337 tgttggaaattctgccttcattgcagtccgcccccagccgcctaattgcggcatttg 31973281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 35527339 - 35527279
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| ||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  35527339 aagagtttacaaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 35527279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 37781921 - 37781849
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | |||||| |||||| |||||||| | ||||| || ||||   ||||||||||||||||||||    
T  37781921 aagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttag 37781849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 37995847 - 37995803
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| |||||||||||| || ||||| |||||||    
T  37995847 tgttggaaattccgcctttattgcggtctgcccctagtcgcctaa 37995803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 4022248 - 4022130
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | | ||||||| | ||||||||||||| |||||||||| ||||| || |||| |||    
T  4022248 ttgtgttggctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccag 4022149  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  4022148 ttttgtaaggatgagttag 4022130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 33879901 - 33879783
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| ||||| ||||||||||||||||||||||| ||||| |  |||||| | ||||||||||||| ||||| |||| ||||| || ||||   |    
T  33879901 ttgtgttggctttgagagggtggatttagtcccacatcagatatatagcactcttgagaagagtttataaagaggagccactcctcaccttacaagctgg 33879802  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  33879801 ttttgtaaggatgagttag 33879783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 33964354 - 33964472
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| ||||| ||||||||||||||||||||||| ||||| |  |||||| | ||||||||||||| ||||| |||| ||||| || ||||   |    
T  33964354 ttgtgttggctttgagagggtggatttagtcccacatcagatatatagcactcttgagaagagtttataaagaggagccactcctcaccttacaagctgg 33964453  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  33964454 ttttgtaaggatgagttag 33964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 43423260 - 43423378
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||| |||||||||  ||| | || |||||| | ||||||||||||| |||||||||| ||||| || |||| |||    
T  43423260 ttgtgttggctttgagggggtggatttattcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagccag 43423359  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  43423360 ttttgtaaggatgagttag 43423378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 51389655 - 51389801
Alignment:
Q  13 aaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcggaggnnnnnnncttacataa 112  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||   ||||||||| |||| ||||||||||||||  ||        ||||||||    
T  51389655 aaaattgaacgaacaaagtctatcgcacaaaacggctaaacagaaacaccaaaggcagacttgaaattgaagtagcagcgcgggaaaaaaaattacataa 51389754  T
Q  113 acaaaacacataatgcagtgtaacacacaccgacagccacgaagaaa 159  Q
    ||||| |||| || ||||  ||||| ||||||| |||||| ||||||    
T  51389755 acaaaccacacaacgcagcataacatacaccgatagccacaaagaaa 51389801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 324 - 444
Target Start/End: Original strand, 17419768 - 17419888
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  17419768 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 17419867  T
Q  424 ttttgtaaggatgagttagac 444  Q
    |||||||||||||||||||||    
T  17419868 ttttgtaaggatgagttagac 17419888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 2697437 - 2697334
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | | ||||||| | ||||||||||||| |||||||||| ||||| || |||| | |||||||||||| |||||    
T  2697437 gggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggacgagtt 2697338  T
Q  441 agac 444  Q
    ||||    
T  2697337 agac 2697334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 31305692 - 31305810
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  31305692 ttgtgttggctttgagggggtggatttagtcccacatccgatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 31305791  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  31305792 ttttgtaaggatgagttag 31305810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 441
Target Start/End: Original strand, 45264644 - 45264760
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||| || |||| | | ||||||| |||||||||||| |||||| |||||| ||||| || |||| | |    
T  45264644 ttgtgttggctttgagggggtggatttagtcccacgtcgaatagataggactcttgataagagtttat-aaaaggcggcactcctcaccttacaagccgg 45264742  T
Q  424 ttttgtaaggatgagtta 441  Q
    ||||||||||||||||||    
T  45264743 ttttgtaaggatgagtta 45264760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 19937166 - 19937048
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  | |||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  19937166 ttgtgttggctttgatggggtggatttagtcccacatcggatagatagaattcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 19937067  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  19937066 ttttgtaaggatgagttag 19937048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 20735503 - 20735621
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||| |||||||||| ||| | |  |||||| | |||| |||||||| |||||||||| ||||| || |||| | |    
T  20735503 ttgtgttggctttgagggggtggatttaatcccacatcagatagatagtactcttgagaagaatttataaagaggaggcactcctcaccttacaagccgg 20735602  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  20735603 ttttgtaaggatgagttag 20735621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 41812734 - 41812661
Alignment:
Q  371 agactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||| || |||||||||||| ||||| |||| |||||||| |||||| ||||||| ||||||||||||||    
T  41812734 agactcttgatgagagtttataaagaggagacacttctcactttacaagtcggttttgtgaggatgagttagac 41812661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 43361648 - 43361555
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||||    
T  43361648 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagac 43361555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 444
Target Start/End: Complemental strand, 8520216 - 8520096
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| | |||||||| ||||| || |||| | |    
T  8520216 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaagaggcactcctcaccttacaagccgg 8520117  T
Q  424 ttttgtaaggatgagttagac 444  Q
    |||||||| ||||||||||||    
T  8520116 ttttgtaaagatgagttagac 8520096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 29413375 - 29413447
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| ||||||||||||||| |||||||||| ||||| ||   || ||||||||||||||||||||||    
T  29413375 aagactcttgataagagtttataaagaggaggcactcctcaccttatgagccagttttgtaaggatgagttag 29413447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 466
Target Start/End: Original strand, 11590428 - 11590543
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagactacgat 450  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| |  |||| | ||||||| | |||||||||| |||| ||    
T  11590428 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctcacaagccggttttgtgatgatgagttaggctacaat 11590527  T
Q  451 ttgaacatggtatcag 466  Q
    || |||||||||||||    
T  11590528 ttcaacatggtatcag 11590543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 15392033 - 15392124
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||||| |||||| |||||||| | |||||||| |||| | ||||||||||||||||||||    
T  15392033 agtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttag 15392124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 441
Target Start/End: Original strand, 20735762 - 20735853
Alignment:
Q  350 tagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    ||||||||||||| ||| | ||||||||  |  |||||||||||| |||||||||| ||||| || |||| | |||||||||||||||||||    
T  20735762 tagtcccacatcagatagataagactctcgagtagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtta 20735853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 40664208 - 40664311
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||| ||||||   || | | ||||||| ||||||||||||||| |||||||||| ||| | || |||| | |||||||||||||| |||    
T  40664208 gggtggatttagtctcacatcggttagataggactcttgataagagtttataaagaggaggcactcctcgccttacaagccggttttgtaaggatgtgtt 40664307  T
Q  441 agac 444  Q
    ||||    
T  40664308 agac 40664311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 39649180 - 39649090
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | |||||||||||||||||||    
T  39649180 agtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 39649090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 29383729 - 29383628
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | ||||  ||| | |||||||||||||  ||||||||| || ||  | |||| ||||||||||||||||||||    
T  29383729 gggtggatttagtcccacatcggatagataagatacttgagaagagtttataaagcggaggcactccttaccgtacaagccagttttgtaaggatgagtt 29383630  T
Q  441 ag 442  Q
    ||    
T  29383629 ag 29383628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 38474285 - 38474382
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||| |||||  ||| | | || |||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||||    
T  38474285 ggatttagtcctacatcggatagataggattcttgacaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 38474382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 43361853 - 43361760
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||| ||| | ||||| || |||| | ||||||||||||||||||||||    
T  43361853 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaagcaatcctcaccttacaagccggttttgtaaggatgagttagac 43361760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 45858657 - 45858754
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||||| |||||  | |||||| ||||| ||||||||||||||    
T  45858657 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagtcggttttataaggatgagttag 45858754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 29273321 - 29273230
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||||||||||||  ||||||| | ||||| || |||| | ||||||||||||||||||||    
T  29273321 agtcccacatcggatagacaagactcttgagaagagtttataaaggggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 29273230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 35024322 - 35024252
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| ||||||||||||||| |||||||||| ||||| || || | | |||||||||||||| |||||    
T  35024322 gactcttgataagagtttataaacaggaggcactcctcaccttacaggccggttttgtaaggatgggttag 35024252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 52846945 - 52846855
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||  ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | |||||||||||||||||||    
T  52846945 agtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 52846855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 2104366 - 2104265
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||   || | | ||  ||| || ||||||| |||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  2104366 gggtggatttagtcccacatcggttagataggaagcttgatcagagtttgtaaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 2104267  T
Q  441 ag 442  Q
    ||    
T  2104266 ag 2104265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 8520448 - 8520391
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    |||||||||||||||||| |||||||||||| ||||| ||||| ||||||||| ||||    
T  8520448 tgttggaaattccgctttaattgcggtccgcccctagtcgcctaaattgcgacctttg 8520391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 15391846 - 15391915
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagt 439  Q
    ||||||||| | |||||| |||||| |||||||| | ||||| || |||| |||||||||||||||||||    
T  15391846 aagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccagttttgtaaggatgagt 15391915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 17294980 - 17295077
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  17294980 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttag 17295077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 18585040 - 18585137
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | |||| |||||||| |||||| ||| |||||  | |||| ||||||||||||||||||||||    
T  18585040 ggatttagtcccacatcggatagataggattcttgagaagattttataaagaggagggactcctcaccgtacaagccagttttgtaaggatgagttag 18585137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 441
Target Start/End: Complemental strand, 19696887 - 19696701
Alignment:
Q  257 ttttgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttgaggtgtcttgtgctggttttgaaagggtggatttagtccc 356  Q
    ||||||||||||||  || ||||||| | |||||  ||||  | ||| ||||| |||||||| ||||| ||| ||| |||||  ||||  ||||||| ||    
T  19696887 ttttgttggaaattttgcctttattgtgatccgcctctagtagtctagttgcggcatttgagttgtctcgtgttggctttgag-gggtaaatttagttcc 19696789  T
Q  357 acatcaaatataaaagactctttataagagtttataaaaaggagg---cactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||| | | | | ||||||| ||||||||||||||| ||||||   |||| ||||| || |||| | |||||| ||||||||||||    
T  19696788 acatcagacagataggactcttgataagagtttataaagaggaggagacactcctcaccttacaagacggttttgcaaggatgagtta 19696701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 28509493 - 28509392
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | | || |||| | ||||||||||||| ||||||||||   |||  | |||| | ||||||||||||||||||    
T  28509493 gggtggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactctccaccgtacaagccggttttgtaaggatgagtt 28509394  T
Q  441 ag 442  Q
    ||    
T  28509393 ag 28509392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 29228677 - 29228774
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||||| |||||| | |||| | | |||||| |||||||||||    
T  29228677 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcactgtacaagccggatttgtagggatgagttag 29228774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 36332150 - 36332211
Alignment:
Q  381 taagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||| |||| ||||| ||||| || |||| | ||||||||||||||||||||    
T  36332150 taagagtttataaagaggatgcactcctcaccttacaagccggttttgtaaggatgagttag 36332211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 41590439 - 41590390
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcg 309  Q
    ||||| ||||||||| || |||||||||||| ||||||||||||||||||    
T  41590439 tgttgaaaattccgccttcattgcggtccgcacctagccgcctaattgcg 41590390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 441
Target Start/End: Original strand, 37600870 - 37600970
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||| |||   ||| | || |||||| | ||||||||||||| ||| |||||| ||||| ||  ||| | ||||||||||||||||||    
T  37600870 gggtggatttagtccctcattggatagataacactcttgagaagagtttataaagaggcggcactcctcaccttataagccggttttgtaaggatgagtt 37600969  T
Q  441 a 441  Q
    |    
T  37600970 a 37600970  T

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Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 38871251 - 38871191
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||||||| ||| | ||||||||| |||| |||||||||| |||||||||| |||||    
T  38871251 agtcccacatcagatagataagactcttgataaaagtttataaagaggaggcactcctcac 38871191  T

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Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 45403479 - 45403539
Alignment:
Q  382 aagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||| |||||||||| ||||| || ||||   ||||||||||||||||||||    
T  45403479 aagagtttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagttag 45403539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 463147 - 463088
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||| ||||| ||||| || |||| | ||||||||||||||||||||    
T  463147 agagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttag 463088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 11149487 - 11149428
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||| ||||| ||||| || |||| | ||||||||||||||||||||    
T  11149487 agagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttag 11149428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 22892784 - 22892693
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||| |  |||||||| || ||| |||||||| ||||| |||| ||| | |  |||| | ||||||||||||||||||||    
T  22892784 agtcccacatcaaataaatgagactcttgatgagactttataaagaggagacactcctcgcctcacaagccggttttgtaaggatgagttag 22892693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 31411662 - 31411603
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcac 404  Q
    |||||||||||||||||| ||| | | || |||| | |||||||||||||||||||||||    
T  31411662 ggatttagtcccacatcagatagataggattcttgaaaagagtttataaaaaggaggcac 31411603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 24131958 - 24131884
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||| | ||||||||||||| |||||||| | ||||  || |||| ||||||| |||| |||||||||||    
T  24131958 aagactcttgagaagagtttataaagaggaggcaatcctcaacttacaagccagttttataagaatgagttagac 24131884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 35024534 - 35024465
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| ||||| ||||||||| |||||||||| ||||| || |||| | |||||||||||||| |||||    
T  35024534 gactcttgataag-gtttataaacaggaggcactcctcaccttacaagccggttttgtaaggatgggttag 35024465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 435
Target Start/End: Original strand, 36326936 - 36326998
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggat 435  Q
    |||||| | ||||||||||||| |||||||||| ||||| || |||| | |||||||||||||    
T  36326936 actcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggat 36326998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 51722255 - 51722353
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaa-aggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | |||||||||||| | |||||||||| |||||  | |||| | ||||||||||||||||||||    
T  51722255 ggatttagtcccacatcggatagataggattcttgagaagagtttataagagaggaggcactcctcaccgtacaagccggttttgtaaggatgagttag 51722353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 5222702 - 5222795
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | ||||||||| ||||||||||||  | ||||| || | ||||| || |||| | ||||| ||||||||||||||||    
T  5222702 agtcccacatctgatagataagactcttgataagagtttatgtagaggagacaatcctcaccttacaagccggttttataaggatgagttagac 5222795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 12287850 - 12287947
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||| ||||||| |||||||||| |||||  | ||||   ||||||||||||||||||||    
T  12287850 ggatttagtcccacatcggatagataggattcttgaaaagaggttataaagaggaggcactcctcaccgtacaagctggttttgtaaggatgagttag 12287947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 13978476 - 13978533
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcctaattgcgacatttg 316  Q
    ||||||||||||||||||| |||||  ||| |  ||||||||| ||||||||||||||    
T  13978476 ttgttggaaattccgctttcattgcaatcctccgctagccgcccaattgcgacatttg 13978533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 438
Target Start/End: Complemental strand, 27958149 - 27958056
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgag 438  Q
    |||||||||||| ||| | ||| | | || |||| | ||||||||||||| |||||||||| |||||  | |||| | ||||||||||||||||    
T  27958149 ggatttagtcccgcattagatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtaaggatgag 27958056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 29228450 - 29228547
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||| ||||||||  ||| | | || |||| | ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  29228450 ggatttagacccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttag 29228547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 33342374 - 33342281
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||| ||| |  |||||||| | |||||| |||||| |||||| |   ||||| || |||| | ||||||||||||||||||||||    
T  33342374 agtcccacatcagatagatgagactcttgagaagagtatataaagaggaggtaaacctcaccttacaagccggttttgtaaggatgagttagac 33342281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 35926434 - 35926377
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    ||||||||||||||| || |||||||||||| ||||| ||||| ||||||||| ||||    
T  35926434 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttg 35926377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 10017420 - 10017364
Alignment:
Q  355 ccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||||| ||| | ||||||||| ||||||||||||||| |||| ||||| |||||    
T  10017420 ccacatcagatagataagactcttgataagagtttataaagaggaagcactcctcac 10017364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 13357023 - 13356919
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaa-ggaggcactactcacttttcaagtcagttttgtaaggatgagt 439  Q
    |||||||||||||| ||||||   || | | ||| ||| ||||||||||||||||| ||||||||| || || || |||| | |||||||| | ||||||    
T  13357023 gggtggatttagtctcacatcggttagatatgacgcttgataagagtttataaaaaaggaggcactcctaaccttacaagccggttttgtaggaatgagt 13356924  T
Q  440 tagac 444  Q
    |||||    
T  13356923 tagac 13356919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 35892001 - 35892089
Alignment:
Q  323 cttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    |||||| ||| |||||  ||||| ||||||||| ||||  | || | || |||||| ||||||||||||||| |||||||||| |||||    
T  35892001 cttgtgttggctttgagggggtgaatttagtcctacattgattagataaaactcttgataagagtttataaagaggaggcactcctcac 35892089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 45395560 - 45395620
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcac 411  Q
    ||||||| |||| ||| | ||||||||| ||||||||||||||  |||||||||| |||||    
T  45395560 agtcccatatcagatagataagactcttgataagagtttataatgaggaggcactcctcac 45395620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 43169223 - 43169341
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| ||||||| |||    
T  43169223 ttgtgttggctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcacctttcaagccag 43169322  T
Q  424 ttttgtaaggatgagttag 442  Q
    ||||||||||| |||||||    
T  43169323 ttttgtaaggaagagttag 43169341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 23054324 - 23054425
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||| ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  23054324 gggtggatttagtcccacatcagatagatataactcttgagaagagtttataaagaggaggcactcctcaccttacaagacggttttgtaaggatgagtt 23054423  T
Q  441 ag 442  Q
    ||    
T  23054424 ag 23054425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 444
Target Start/End: Complemental strand, 28193677 - 28193578
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||||||||| ||| | | || |||| | |||| |||||||| |||||||||| |||||  | |||||||||||||||||||||||||||||    
T  28193677 ggatttagtcccacatcagatagataggattcttgagaagattttataaagaggaggcactcctcaccgtacaagtcagttttgtaaggatgagttagac 28193578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 3976594 - 3976476
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | || | |||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  3976594 ttgtgttggctttgagggggtggatttagtcccacatcggatagataatattcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 3976495  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  3976494 ttttgtaaggatgagttag 3976476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 21214324 - 21214206
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||| | ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  21214324 ttgtgttggctttgagggggtggatttagtcccacattagatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 21214225  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  21214224 ttttgtaaggatgagttag 21214206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 43195765 - 43195883
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||| ||||||||||||||||| ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  43195765 ttgtgttggctttgagggggtagatttagtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 43195864  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||||||||    
T  43195865 ttttgtaaggatgagttag 43195883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 343 - 442
Target Start/End: Complemental strand, 10849595 - 10849496
Alignment:
Q  343 gtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||| |||| ||| ||| | | | ||||| ||||||||||||||| |||||||||| ||||| || |||||  ||||||||||||||||||||    
T  10849595 gtggatttagttccacttcagatagatagggctcttgataagagtttataaagaggaggcactcctcaccttacaagttggttttgtaaggatgagttag 10849496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 438
Target Start/End: Complemental strand, 18901987 - 18901873
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  |||||||||||||||||||||  ||| | ||||||||| | ||||||||||||| ||||||||||  |||| || |||| | |    
T  18901987 ttgtgttggctttgagggggtggatttagtcccacatcggatagataagactcttgaaaagagtttataaagaggaggcactcttcaccttacaagcctg 18901888  T
Q  424 ttttgtaaggatgag 438  Q
    ||||||||| |||||    
T  18901887 ttttgtaagaatgag 18901873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 442
Target Start/End: Original strand, 25441697 - 25441795
Alignment:
Q  344 tggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||||||||| ||| | |  |||||| | ||||||||||||| ||| |||||| ||||| || |||| | ||||||||||||||||||||    
T  25441697 tggatttagtcccacatcagatagatagtactcttgagaagagtttataaagagggggcactcctcaccttacaagccggttttgtaaggatgagttag 25441795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 3977109 - 3977008
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||  || |||| | ||||||||||||||||||    
T  3977109 gggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaaattacaagccggttttgtaaggatgagtt 3977010  T
Q  441 ag 442  Q
    ||    
T  3977009 ag 3977008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 11969050 - 11969151
Alignment:
Q  341 gggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||||||||||| ||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | ||||||||||||||||||    
T  11969050 gggtggatttagtcccacgtcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtt 11969149  T
Q  441 ag 442  Q
    ||    
T  11969150 ag 11969151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 444
Target Start/End: Complemental strand, 6183489 - 6183369
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||| |||||||||  ||| | |  |||||| | ||||||||||||| ||||| |||| ||||| || |||| | |    
T  6183489 ttgtgttggctttgagggggtggatttaatcccacatcggatagatagtactcttgagaagagtttataaagaggagacacttctcaccttacaagccgg 6183390  T
Q  424 ttttgtaaggatgagttagac 444  Q
    |||||||||||||||||||||    
T  6183389 ttttgtaaggatgagttagac 6183369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 440
Target Start/End: Complemental strand, 21214008 - 21213892
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||||||||   ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | |    
T  21214008 ttgtgttggctttgagggggtggatttagtcccacattggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccgg 21213909  T
Q  424 ttttgtaaggatgagtt 440  Q
    |||||||||||||||||    
T  21213908 ttttgtaaggatgagtt 21213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 20999085 - 20998994
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  20999085 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 20998994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 32667191 - 32667282
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| ||| | ||||||||| ||||||||||||| | |||||||| | || || || |||| | ||||||||||||||||||||    
T  32667191 agtcccacatcagatagataagactcttgataagagtttatatagaggaggcaatccttaccttacaagccggttttgtaaggatgagttag 32667282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 883697 - 883607
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | |||||||||||||||||||    
T  883697 agtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 883607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 442
Target Start/End: Complemental strand, 42768437 - 42768339
Alignment:
Q  342 ggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||| |||||||||||||||  ||| | |  |||||| | ||||||||||||| |||||||||| ||||| || |||| | |||||||||||||||||||    
T  42768437 ggtgaatttagtcccacatcggatagata--actcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtta 42768340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 8044642 - 8044550
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaa-aggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| ||||| ||| | ||||||||| |||||||||||||||| |||||||||| ||||| ||   |  ||||||||||||||||||||||    
T  8044642 agtcccgcatcagatagataagactcttgataagagtttataaaagaggaggcactcctcaccttatgaaccagttttgtaaggatgagttag 8044550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 444
Target Start/End: Complemental strand, 27545211 - 27545119
Alignment:
Q  352 gtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||  | ||||||||||||||||||||||    
T  27545211 gtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaaaccggttttgtaaggatgagttagac 27545119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 444
Target Start/End: Complemental strand, 10862160 - 10862061
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| ||||||||||  ||||  | |||| | ||||||||||||||||||||||    
T  10862160 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcatcaccgtacaagccggttttgtaaggatgagttagac 10862061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 17727412 - 17727503
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| || ||||| | ||||| || |||| | ||||||||||||||||||||    
T  17727412 agtcccacatcggatagataagactcttgagaagagtttataaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttag 17727503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 34775365 - 34775456
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | |||| |||||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  34775365 agtcccacatcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 34775456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 38760392 - 38760322
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||| ||||||||||||||| ||||||||||  |||| || |||| | ||||||||| ||||||||||    
T  38760392 gactcttgataagagtttataaagaggaggcactcgtcaccttacaagccggttttgtaacgatgagttag 38760322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 16006985 - 16007078
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||  ||| | ||||||||| | |||||| |||||| |||||| | | ||||| || |||| | ||||||||||||||||||||||    
T  16006985 agtcccacatcggatagacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaagccggttttgtaaggatgagttagac 16007078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 444
Target Start/End: Original strand, 10429776 - 10429840
Alignment:
Q  380 ataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||||||||| ||||| |||| ||||  || |||| | ||||||||||||||||||||||    
T  10429776 ataagagtttataaagaggagacactcctcatcttacaagccggttttgtaaggatgagttagac 10429840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 17325173 - 17325269
Alignment:
Q  346 gatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||||||  ||| | | || |||| | |||| |||||||| ||||||||||  ||||| | |||| | ||||||||||||||||||||    
T  17325173 gatttagtcccacatctgatagataggattcttaagaagaatttataaagaggaggcactcttcactgtacaagccggttttgtaaggatgagttag 17325269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 444
Target Start/End: Original strand, 28895564 - 28895627
Alignment:
Q  380 ataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||||||||||||||||| || |||| ||||| || |||| | ||||||||||||||||||||||    
T  28895564 ataagagtttataaaaag-agacactcctcaccttacaagccggttttgtaaggatgagttagac 28895627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 443
Target Start/End: Original strand, 29684019 - 29684111
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttaga 443  Q
    |||||| ||||| ||| | ||||||||| | |||||| |||||| |||||||| | ||||| || |||| | ||||||||||||| |||||||    
T  29684019 agtcccgcatcagatagacaagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggataagttaga 29684111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 33277620 - 33277556
Alignment:
Q  380 ataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    |||| |||||||||||| ||| || | ||||| || |||||||||||||||| ||||||||||||    
T  33277620 ataaaagtttataaaaatgagtcaattctcaccttacaagtcagttttgtaaagatgagttagac 33277556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 3435582 - 3435491
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||| | |||||||| | ||||| || |||  | ||||||||||||||||||||    
T  3435582 agtcccacatcggatagataagactcttgagaagagtttatacagaggaggcaatcctcaccttacaaaccggttttgtaaggatgagttag 3435491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 3977219 - 3977172
Alignment:
Q  257 ttttgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    |||||||||||||||||| || |||||||||||| ||||| |||||||    
T  3977219 ttttgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 3977172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 438
Target Start/End: Original strand, 12431906 - 12431993
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgag 438  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| ||||| || | ||||| || |||| | ||||||||||||||||    
T  12431906 agtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaaggatgag 12431993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 19860045 - 19860136
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | | ||| || |||| | ||||||||||||||| ||||    
T  19860045 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatccacaccttacaagccggttttgtaaggatgatttag 19860136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 30156248 - 30156307
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||||| ||||| || |||| | ||||||||||||| ||||||    
T  30156248 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggataagttag 30156307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 30160367 - 30160426
Alignment:
Q  383 agagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||| |||||||||| || || || |||| | ||||||||||||||||||||    
T  30160367 agagtttataaagaggaggcactccttaccttacaagccggttttgtaaggatgagttag 30160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 31761358 - 31761429
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    ||||||||| ||||||||||||| | |||||||| | ||||| || |||| |  ||||||||||||||||||    
T  31761358 aagactcttaataagagtttatatagaggaggcaatcctcaccttacaagccgattttgtaaggatgagtta 31761429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 440
Target Start/End: Complemental strand, 7257685 - 7257615
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    ||||||||| | || |||||||||| |||| ||| | ||||| || |||||| ||||||||||||||||||    
T  7257685 aagactcttgagaatagtttataaagaggatgcaatcctcaccttacaagtcggttttgtaaggatgagtt 7257615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 7877825 - 7877943
Alignment:
Q  324 ttgtgctggttttgaaagggtggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcag 423  Q
    ||||| ||| |||||  ||||||||||||||| |||||  ||| | |  |||||  | ||||||||||||| ||||| |||| ||||| || |||| | |    
T  7877825 ttgtgttggctttgagggggtggatttagtcctacatcggatagatagcactctcgagaagagtttataaagaggagacactcctcaccttacaagccgg 7877924  T
Q  424 ttttgtaaggatgagttag 442  Q
    |||||||||||||| ||||    
T  7877925 ttttgtaaggatgaattag 7877943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 442
Target Start/End: Complemental strand, 39596805 - 39596711
Alignment:
Q  348 tttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||||||||   |||| |  |||||| ||||||||||||||| |||||||||| ||| | || |||  | ||||||| ||||||||||||    
T  39596805 tttagtcccacatcggctatatagaactcttgataagagtttataaagaggaggcactcctcgccttacaatccggttttgtgaggatgagttag 39596711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 45420697 - 45420767
Alignment:
Q  372 gactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||| |||||||||||||||||| | |||||||| ||||| |  || ||| ||||||||||||| ||||||    
T  45420697 gactttttataagagtttataaataagaggcactcctcacctaacatgtcggttttgtaaggattagttag 45420767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 304
Target Start/End: Original strand, 7877734 - 7877779
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||||||| |||||||||||  ||||| |||||||    
T  7877734 ttgttggaaattccgctttaattgcggtccgtccctagtcgcctaa 7877779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 442
Target Start/End: Complemental strand, 10542137 - 10542068
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| ||||||||||||||| ||||| |||| ||||  || ||||   ||||||||||||||||||||    
T  10542137 actcttgataagagtttataaagaggagacactcctcatcttacaagctggttttgtaaggatgagttag 10542068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 10849705 - 10849668
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctag 296  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  10849705 ttgttggaaattccgcctttattgcggtccgcccctag 10849668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 10862308 - 10862405
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | |||| | |||| ||||||||||||| ||||| ||||  ||||  | |||| ||||||||||| | ||||||||    
T  10862308 ggatttagtcccacatcggatagataagattttttagaagagtttataaagaggagacactcatcaccgtacaagccagttttgtaaaggtgagttag 10862405  T

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Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 15962259 - 15962162
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | || |||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  15962259 ggatttagtcccacatcggatagataggaatcttgagaatagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttag 15962162  T

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Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 304
Target Start/End: Original strand, 25441586 - 25441631
Alignment:
Q  259 ttgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    |||||||||||||| | ||||||||||||||| ||||| |||||||    
T  25441586 ttgttggaaattccacctttattgcggtccgcccctagtcgcctaa 25441631  T

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Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 33532838 - 33532741
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || |||| | ||||||||||||| |||||||||| |||||  | |||| | |||||||| || ||||||||    
T  33532838 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggttgagttag 33532741  T

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Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 39420699 - 39420796
Alignment:
Q  345 ggatttagtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||||||||  ||| | | || | || | ||||||||||||| |||||||||| |||||  | |||| | |||||||| |||||||||||    
T  39420699 ggatttagtcccacatcggatagataggaattttgagaagagtttataaagaggaggcactcctcacagtacaagccggttttgtacggatgagttag 39420796  T

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Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 42768553 - 42768488
Alignment:
Q  252 aatatttttgttggaaattccgcttttattgcggtccgctcctagccgcct-aattgcgacatttg 316  Q
    |||| |||||||||||||||||| || |||||||| ||| ||||| ||||| ||||||||| ||||    
T  42768553 aatagttttgttggaaattccgccttaattgcggttcgcccctagtcgcctaaattgcgacctttg 42768488  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 883877 - 883949
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | |||||||||||||   |||||| | ||||| || |||| | ||||||||||||||||||||    
T  883877 aagactcttgagaagagtttataaaggagaggcaatcctcaccttacaagccggttttgtaaggatgagttag 883949  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 441
Target Start/End: Complemental strand, 2333420 - 2333364
Alignment:
Q  385 agtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    ||||||||||||| || |||| ||||| || |||| ||||||||||||| |||||||    
T  2333420 agtttataaaaagaagacactcctcaccttacaagccagttttgtaaggttgagtta 2333364  T

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Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 3976900 - 3976848
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgccta-attgcgac 311  Q
    |||||||||||||||||| |||||| ||||| ||||| |||||| ||||||||    
T  3976900 tgttggaaattccgctttaattgcgatccgcccctagtcgcctacattgcgac 3976848  T

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Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 441
Target Start/End: Complemental strand, 15061327 - 15061271
Alignment:
Q  385 agtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtta 441  Q
    |||||||||| |||||||||| ||||| || ||||   |||||||||||||||||||    
T  15061327 agtttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagtta 15061271  T

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Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 21214414 - 21214370
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||    
T  21214414 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 21214370  T

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Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 32667004 - 32667076
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| ||||||||||||| | |||||||| | || || || |||| | ||||||||| ||||||||||    
T  32667004 aagactcttgataagagtttatatagaggaggcaattcttaccttacaagccggttttgtaatgatgagttag 32667076  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 440
Target Start/End: Original strand, 32975260 - 32975348
Alignment:
Q  352 gtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagtt 440  Q
    |||||||||  |||| | ||||||||| | |||| |||||||| ||||  || | ||||| || |||| ||||||||||||||||||||    
T  32975260 gtcccacattgaatagataagactcttgagaagaatttataaagaggaaacaatcctcaccttacaagccagttttgtaaggatgagtt 32975348  T

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Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 33985865 - 33985776
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||  ||||| |||||||| | ||||| || |||| | ||||||||||||||||||||    
T  33985865 agtcccacatcggatagataagactcttgagaagagt--ataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 33985776  T

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Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 43169133 - 43169177
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||    
T  43169133 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 43169177  T

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Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 43195675 - 43195719
Alignment:
Q  260 tgttggaaattccgcttttattgcggtccgctcctagccgcctaa 304  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||    
T  43195675 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaa 43195719  T

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Target: scaffold0989 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 3043 - 2952
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | |||||||| ||||   ||||||||||||||||||||    
T  3043 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcactttacaagctggttttgtaaggatgagttag 2952  T

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Target: scaffold0054 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 21359 - 21268
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||||  ||||||||||||||||||||    
T  21359 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagttggttttgtaaggatgagttag 21268  T

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Target: scaffold1138 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 442
Target Start/End: Complemental strand, 2153 - 2084
Alignment:
Q  373 actctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||| ||||||||||||| | |||||||| | ||||| || |||| ||||||||||||||||||||||    
T  2153 actcttgataagagtttatatagaggaggcaatcctcaccttacaagccagttttgtaaggatgagttag 2084  T

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Target: scaffold1138; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 1950 - 1876
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagac 444  Q
    ||||||||| |||||||||||||   ||||||||||  |||| || |||| | |||||||||| |||||||||||    
T  1950 aagactcttgataagagtttataccgaggaggcactcttcaccttacaagccggttttgtaagcatgagttagac 1876  T

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Target: scaffold0434 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 466
Target Start/End: Original strand, 13315 - 13430
Alignment:
Q  352 gtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttagactacg-at 450  Q
    ||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||| |||||||||||| |  || ||    
T  13315 gtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtgaggatgagttaggccccgaat 13414  T
Q  451 ttgaacatggtatcag 466  Q
    || |||||||||||||    
T  13415 ttcaacatggtatcag 13430  T

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Target: scaffold0434; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 13540 - 13612
Alignment:
Q  370 aagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||  ||||||||||||    
T  13540 aagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgcgaggatgagttag 13612  T

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Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 76860 - 76951
Alignment:
Q  351 agtcccacatcaaatataaaagactctttataagagtttataaaaaggaggcactactcacttttcaagtcagttttgtaaggatgagttag 442  Q
    |||||||||||  ||| | ||||||||| | ||||||||||||| |||||||| | ||||| || |||| | ||||||||| ||||||||||    
T  76860 agtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaagatgagttag 76951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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