View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18077_high_47 (Length: 250)

Name: NF18077_high_47
Description: NF18077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18077_high_47
NF18077_high_47
[»] chr5 (54 HSPs)
chr5 (78-215)||(1349671-1349805)
chr5 (78-215)||(19134775-19134906)
chr5 (154-215)||(35039748-35039809)
chr5 (82-215)||(19135031-19135160)
chr5 (126-215)||(35040394-35040484)
chr5 (142-215)||(4727860-4727934)
chr5 (127-213)||(5249367-5249453)
chr5 (142-215)||(5246529-5246602)
chr5 (142-215)||(35041000-35041073)
chr5 (142-213)||(35781386-35781457)
chr5 (78-197)||(43583006-43583114)
chr5 (126-215)||(6429477-6429567)
chr5 (78-215)||(40591330-40591458)
chr5 (214-250)||(27503376-27503412)
chr5 (155-215)||(28794017-28794077)
chr5 (127-215)||(34383394-34383482)
chr5 (215-250)||(13957668-13957703)
chr5 (215-250)||(42247920-42247955)
chr5 (216-250)||(9424730-9424764)
chr5 (78-116)||(17367517-17367555)
chr5 (78-189)||(25458472-25458577)
chr5 (216-250)||(35626037-35626071)
chr5 (216-250)||(36365583-36365617)
chr5 (157-215)||(38184307-38184364)
chr5 (157-215)||(38213993-38214050)
chr5 (217-250)||(6973063-6973096)
chr5 (170-215)||(18585695-18585740)
chr5 (214-250)||(4149691-4149727)
chr5 (127-187)||(12545876-12545936)
chr5 (214-250)||(19295727-19295763)
chr5 (214-250)||(24253379-24253415)
chr5 (214-250)||(25831518-25831554)
chr5 (218-250)||(38015652-38015684)
chr5 (214-250)||(42658800-42658836)
chr5 (214-250)||(43262332-43262368)
chr5 (214-250)||(43326528-43326564)
chr5 (215-250)||(3466830-3466865)
chr5 (215-250)||(5137713-5137748)
chr5 (215-250)||(5497271-5497306)
chr5 (211-250)||(36472422-36472461)
chr5 (216-250)||(5184971-5185005)
chr5 (220-250)||(9171163-9171193)
chr5 (214-248)||(12558169-12558203)
chr5 (216-250)||(23195386-23195420)
chr5 (216-250)||(33617584-33617618)
chr5 (127-215)||(38494512-38494602)
chr5 (216-250)||(40886176-40886210)
chr5 (214-247)||(739856-739889)
chr5 (214-250)||(6901796-6901832)
chr5 (218-250)||(9374640-9374672)
chr5 (218-250)||(15398631-15398663)
chr5 (218-250)||(18479817-18479849)
chr5 (155-215)||(35040170-35040230)
chr5 (214-250)||(40110231-40110267)
[»] chr3 (83 HSPs)
chr3 (78-215)||(54981903-54982034)
chr3 (126-215)||(54356285-54356374)
chr3 (78-215)||(8708034-8708166)
chr3 (78-215)||(9059921-9060053)
chr3 (76-215)||(21388358-21388491)
chr3 (78-216)||(7433541-7433672)
chr3 (126-215)||(12101077-12101166)
chr3 (78-215)||(3942515-3942649)
chr3 (142-215)||(10333117-10333190)
chr3 (126-215)||(44077782-44077873)
chr3 (78-215)||(47567576-47567708)
chr3 (78-213)||(54143011-54143140)
chr3 (78-215)||(11633080-11633209)
chr3 (82-184)||(23027534-23027630)
chr3 (141-203)||(21459642-21459704)
chr3 (126-215)||(10332667-10332755)
chr3 (78-215)||(24842422-24842552)
chr3 (78-187)||(34794410-34794513)
chr3 (78-189)||(46515067-46515173)
chr3 (128-215)||(10297191-10297279)
chr3 (211-250)||(51415963-51416002)
chr3 (78-215)||(30498379-30498509)
chr3 (142-212)||(40285041-40285111)
chr3 (142-208)||(53877664-53877730)
chr3 (142-215)||(54981604-54981677)
chr3 (214-250)||(34279859-34279895)
chr3 (214-250)||(51224175-51224211)
chr3 (214-250)||(54707358-54707394)
chr3 (156-215)||(24485606-24485665)
chr3 (215-250)||(25641644-25641679)
chr3 (215-250)||(28048541-28048576)
chr3 (156-215)||(33832814-33832873)
chr3 (211-250)||(40131108-40131147)
chr3 (216-250)||(20754542-20754576)
chr3 (216-250)||(41635938-41635972)
chr3 (216-250)||(42589829-42589863)
chr3 (126-188)||(45586143-45586205)
chr3 (216-250)||(47809746-47809780)
chr3 (142-215)||(10297429-10297502)
chr3 (213-250)||(17665662-17665699)
chr3 (155-215)||(26167898-26167961)
chr3 (217-250)||(38156770-38156803)
chr3 (214-250)||(5560181-5560217)
chr3 (142-186)||(10317043-10317087)
chr3 (214-250)||(24100280-24100316)
chr3 (214-250)||(29625976-29626012)
chr3 (218-250)||(31286931-31286963)
chr3 (214-250)||(32234546-32234582)
chr3 (214-250)||(37313396-37313432)
chr3 (214-246)||(37324538-37324570)
chr3 (214-250)||(41464349-41464385)
chr3 (214-250)||(43125828-43125864)
chr3 (214-250)||(49130575-49130611)
chr3 (214-250)||(51102527-51102563)
chr3 (210-250)||(54159137-54159177)
chr3 (215-250)||(22399095-22399130)
chr3 (215-250)||(42291840-42291875)
chr3 (215-250)||(47511078-47511113)
chr3 (160-215)||(47567774-47567829)
chr3 (215-250)||(49330035-49330070)
chr3 (216-250)||(2665999-2666033)
chr3 (216-250)||(7755455-7755489)
chr3 (78-116)||(10334295-10334333)
chr3 (216-250)||(39053393-39053427)
chr3 (216-250)||(39141264-39141298)
chr3 (216-250)||(44806683-44806717)
chr3 (216-250)||(47257792-47257826)
chr3 (216-250)||(48726136-48726170)
chr3 (216-250)||(54401186-54401220)
chr3 (216-250)||(55000316-55000350)
chr3 (217-250)||(27067127-27067160)
chr3 (155-215)||(42583609-42583670)
chr3 (217-250)||(51452899-51452932)
chr3 (127-215)||(2788434-2788522)
chr3 (214-250)||(7855263-7855299)
chr3 (214-250)||(25353551-25353587)
chr3 (214-250)||(37028720-37028756)
chr3 (216-248)||(40643799-40643831)
chr3 (218-250)||(40804659-40804691)
chr3 (214-250)||(48546978-48547014)
chr3 (214-250)||(52638839-52638875)
chr3 (216-248)||(53943738-53943770)
chr3 (214-250)||(55453393-55453429)
[»] scaffold0016 (2 HSPs)
scaffold0016 (78-215)||(106019-106149)
scaffold0016 (78-215)||(205261-205391)
[»] chr4 (96 HSPs)
chr4 (78-215)||(54175850-54175981)
chr4 (78-215)||(7238838-7238968)
chr4 (82-215)||(41692449-41692576)
chr4 (78-215)||(19298461-19298595)
chr4 (78-212)||(44886190-44886319)
chr4 (125-194)||(41104035-41104104)
chr4 (126-215)||(49897342-49897431)
chr4 (129-215)||(50715691-50715778)
chr4 (78-215)||(11125977-11126108)
chr4 (126-215)||(12928566-12928656)
chr4 (126-212)||(39136045-39136131)
chr4 (161-215)||(54806864-54806918)
chr4 (142-215)||(2494082-2494155)
chr4 (126-215)||(4780642-4780731)
chr4 (78-189)||(6046362-6046469)
chr4 (158-215)||(53130875-53130932)
chr4 (128-215)||(29100838-29100928)
chr4 (127-215)||(36889662-36889750)
chr4 (156-215)||(11125268-11125327)
chr4 (142-189)||(33802977-33803024)
chr4 (142-215)||(660184-660256)
chr4 (92-189)||(9519061-9519151)
chr4 (214-250)||(11972267-11972303)
chr4 (135-215)||(29618255-29618335)
chr4 (214-250)||(37239228-37239264)
chr4 (79-187)||(43495876-43495978)
chr4 (216-250)||(15060427-15060461)
chr4 (216-250)||(27873686-27873720)
chr4 (216-250)||(34552318-34552352)
chr4 (214-248)||(54216310-54216344)
chr4 (217-250)||(5117576-5117609)
chr4 (145-194)||(29993417-29993466)
chr4 (217-250)||(34276547-34276580)
chr4 (211-248)||(50233994-50234031)
chr4 (213-250)||(54805767-54805804)
chr4 (214-250)||(3293161-3293197)
chr4 (218-250)||(20351980-20352012)
chr4 (214-250)||(29478357-29478393)
chr4 (216-248)||(33289702-33289734)
chr4 (214-250)||(41632155-41632191)
chr4 (214-250)||(41702608-41702644)
chr4 (214-250)||(45633917-45633953)
chr4 (214-250)||(47344653-47344689)
chr4 (214-250)||(51363004-51363040)
chr4 (214-250)||(53461965-53462001)
chr4 (215-250)||(14017523-14017558)
chr4 (215-250)||(17555635-17555670)
chr4 (215-250)||(23437590-23437625)
chr4 (161-215)||(27838986-27839041)
chr4 (211-250)||(34835171-34835210)
chr4 (215-250)||(39077543-39077578)
chr4 (158-189)||(42882083-42882114)
chr4 (215-250)||(49881212-49881247)
chr4 (215-250)||(54216874-54216909)
chr4 (216-250)||(2243457-2243491)
chr4 (216-250)||(9998069-9998103)
chr4 (216-250)||(29777406-29777440)
chr4 (216-250)||(31070222-31070256)
chr4 (216-250)||(31881452-31881486)
chr4 (216-250)||(36532969-36533003)
chr4 (158-208)||(40956925-40956975)
chr4 (216-250)||(41949381-41949415)
chr4 (216-250)||(43471844-43471878)
chr4 (216-250)||(46708879-46708913)
chr4 (216-250)||(48313556-48313590)
chr4 (216-250)||(50457959-50457993)
chr4 (216-250)||(52688348-52688382)
chr4 (216-250)||(53854578-53854612)
chr4 (216-250)||(55056408-55056442)
chr4 (217-250)||(146578-146611)
chr4 (214-247)||(3170623-3170656)
chr4 (217-250)||(6285307-6285340)
chr4 (128-188)||(7770217-7770278)
chr4 (142-187)||(13222225-13222270)
chr4 (217-250)||(18462162-18462195)
chr4 (213-250)||(21366758-21366795)
chr4 (142-195)||(24739044-24739097)
chr4 (217-250)||(47811906-47811939)
chr4 (217-250)||(54715035-54715068)
chr4 (214-250)||(2826830-2826866)
chr4 (127-215)||(5028964-5029052)
chr4 (218-250)||(6019929-6019961)
chr4 (218-250)||(22468919-22468951)
chr4 (218-250)||(22618661-22618693)
chr4 (214-250)||(22620590-22620626)
chr4 (214-250)||(26091407-26091443)
chr4 (214-250)||(31532284-31532320)
chr4 (216-248)||(41560327-41560359)
chr4 (214-250)||(42033172-42033208)
chr4 (214-250)||(42085204-42085240)
chr4 (218-250)||(42222292-42222324)
chr4 (218-250)||(42557583-42557615)
chr4 (216-248)||(42765992-42766024)
chr4 (218-250)||(43890929-43890961)
chr4 (214-250)||(44984758-44984794)
chr4 (214-250)||(49014095-49014131)
[»] chr1 (90 HSPs)
chr1 (78-215)||(43325903-43326034)
chr1 (78-215)||(49243793-49243924)
chr1 (82-215)||(17054241-17054368)
chr1 (78-196)||(24705397-24705509)
chr1 (78-215)||(6844477-6844608)
chr1 (78-212)||(47795005-47795131)
chr1 (126-205)||(42834931-42835010)
chr1 (95-215)||(43114759-43114877)
chr1 (128-215)||(47795424-47795511)
chr1 (78-215)||(24686207-24686337)
chr1 (78-197)||(39842797-39842911)
chr1 (79-215)||(47796302-47796434)
chr1 (142-215)||(6318923-6318996)
chr1 (78-215)||(11981727-11981856)
chr1 (126-215)||(47795950-47796039)
chr1 (84-215)||(43114911-43115036)
chr1 (128-215)||(48738509-48738596)
chr1 (142-211)||(33674998-33675067)
chr1 (144-197)||(47794817-47794870)
chr1 (78-186)||(6941401-6941503)
chr1 (78-180)||(11981163-11981259)
chr1 (78-197)||(33241111-33241224)
chr1 (144-211)||(40793031-40793098)
chr1 (142-189)||(45296774-45296821)
chr1 (78-189)||(8795322-8795428)
chr1 (78-197)||(47793071-47793185)
chr1 (78-215)||(49480187-49480318)
chr1 (214-250)||(3611133-3611169)
chr1 (214-250)||(26472317-26472353)
chr1 (214-250)||(29770667-29770703)
chr1 (214-250)||(42234837-42234873)
chr1 (78-197)||(45378370-45378484)
chr1 (214-250)||(51057068-51057104)
chr1 (78-197)||(12016876-12016989)
chr1 (211-250)||(25058682-25058721)
chr1 (142-188)||(10066475-10066521)
chr1 (78-116)||(21447445-21447483)
chr1 (216-250)||(41467770-41467804)
chr1 (79-215)||(42429608-42429740)
chr1 (212-250)||(44661965-44662003)
chr1 (78-187)||(52404117-52404219)
chr1 (217-250)||(6626162-6626195)
chr1 (213-250)||(10928063-10928100)
chr1 (217-250)||(13281700-13281733)
chr1 (213-250)||(23984751-23984788)
chr1 (217-250)||(34752452-34752485)
chr1 (214-250)||(2657300-2657336)
chr1 (214-250)||(6327696-6327732)
chr1 (137-189)||(10105981-10106033)
chr1 (214-250)||(24245174-24245210)
chr1 (214-250)||(26277174-26277210)
chr1 (214-250)||(27983736-27983772)
chr1 (214-250)||(33073208-33073244)
chr1 (214-250)||(38332008-38332044)
chr1 (144-215)||(42834615-42834687)
chr1 (214-250)||(46616546-46616582)
chr1 (214-250)||(48373501-48373537)
chr1 (218-250)||(50774218-50774250)
chr1 (215-250)||(4243628-4243663)
chr1 (215-250)||(31307999-31308034)
chr1 (219-250)||(32448650-32448681)
chr1 (215-250)||(33112966-33113001)
chr1 (215-250)||(35692813-35692848)
chr1 (214-249)||(36030736-36030771)
chr1 (215-250)||(45538151-45538186)
chr1 (214-248)||(2556997-2557031)
chr1 (216-250)||(4156214-4156248)
chr1 (216-250)||(5980067-5980101)
chr1 (216-250)||(5981169-5981203)
chr1 (78-116)||(10338233-10338271)
chr1 (216-250)||(17995100-17995134)
chr1 (216-250)||(23221078-23221112)
chr1 (214-248)||(23994845-23994879)
chr1 (216-250)||(24885500-24885534)
chr1 (216-250)||(31040708-31040742)
chr1 (213-247)||(36003126-36003160)
chr1 (218-248)||(44544186-44544216)
chr1 (142-215)||(45807995-45808069)
chr1 (216-250)||(46967190-46967224)
chr1 (214-248)||(47671583-47671617)
chr1 (216-250)||(49254124-49254158)
chr1 (215-248)||(3285400-3285433)
chr1 (146-187)||(26271976-26272017)
chr1 (217-250)||(26525038-26525071)
chr1 (215-248)||(26794302-26794335)
chr1 (217-250)||(46428391-46428424)
chr1 (217-250)||(47383881-47383914)
chr1 (217-250)||(51403156-51403189)
chr1 (218-250)||(4953053-4953085)
chr1 (216-248)||(35273595-35273627)
[»] chr7 (84 HSPs)
chr7 (75-159)||(46898193-46898277)
chr7 (155-215)||(46897955-46898015)
chr7 (85-215)||(30121871-30121995)
chr7 (142-215)||(47222543-47222617)
chr7 (127-215)||(30121286-30121374)
chr7 (78-215)||(35526492-35526626)
chr7 (145-215)||(40261924-40261994)
chr7 (78-215)||(5800989-5801122)
chr7 (128-215)||(14312450-14312537)
chr7 (144-215)||(38319959-38320030)
chr7 (78-215)||(26246573-26246705)
chr7 (125-215)||(35223801-35223890)
chr7 (142-215)||(21696487-21696559)
chr7 (78-215)||(24162116-24162252)
chr7 (126-203)||(24688776-24688853)
chr7 (78-210)||(26970742-26970867)
chr7 (128-215)||(26970406-26970493)
chr7 (127-215)||(10283290-10283378)
chr7 (143-215)||(24689354-24689428)
chr7 (142-211)||(23640761-23640830)
chr7 (158-215)||(26175462-26175519)
chr7 (209-250)||(32556744-32556785)
chr7 (127-212)||(33857986-33858071)
chr7 (214-250)||(25894066-25894102)
chr7 (214-250)||(46817559-46817595)
chr7 (79-208)||(21696741-21696863)
chr7 (128-211)||(23808924-23809007)
chr7 (215-250)||(24228540-24228575)
chr7 (215-250)||(36816983-36817018)
chr7 (78-116)||(10282006-10282044)
chr7 (83-189)||(11486412-11486512)
chr7 (216-250)||(24923162-24923196)
chr7 (216-250)||(26579866-26579900)
chr7 (216-250)||(29610635-29610669)
chr7 (216-250)||(35752172-35752206)
chr7 (216-250)||(39323616-39323650)
chr7 (216-250)||(47906897-47906931)
chr7 (216-250)||(48085858-48085892)
chr7 (214-247)||(25037649-25037682)
chr7 (215-248)||(44659843-44659876)
chr7 (144-188)||(4594478-4594522)
chr7 (214-250)||(5712166-5712202)
chr7 (214-250)||(22979796-22979832)
chr7 (214-250)||(33332787-33332823)
chr7 (214-250)||(35484634-35484670)
chr7 (126-186)||(35525952-35526012)
chr7 (218-250)||(39866667-39866699)
chr7 (214-250)||(44003508-44003544)
chr7 (214-250)||(45063504-45063540)
chr7 (214-250)||(46913107-46913143)
chr7 (214-250)||(47740480-47740516)
chr7 (214-250)||(48609826-48609862)
chr7 (215-250)||(7876466-7876501)
chr7 (215-250)||(33839864-33839899)
chr7 (215-250)||(35823289-35823324)
chr7 (215-250)||(45482657-45482692)
chr7 (215-250)||(46898154-46898189)
chr7 (216-250)||(498326-498360)
chr7 (216-250)||(10028488-10028522)
chr7 (214-248)||(19563445-19563479)
chr7 (158-212)||(26151189-26151243)
chr7 (216-250)||(26941670-26941704)
chr7 (129-203)||(29854704-29854778)
chr7 (214-248)||(33695972-33696006)
chr7 (216-250)||(35328218-35328252)
chr7 (216-250)||(35767481-35767515)
chr7 (216-250)||(39453613-39453647)
chr7 (214-248)||(42272149-42272183)
chr7 (216-250)||(43489218-43489252)
chr7 (158-215)||(10282501-10282558)
chr7 (215-248)||(27018115-27018148)
chr7 (217-250)||(29098752-29098785)
chr7 (159-216)||(37986005-37986062)
chr7 (158-190)||(1644573-1644605)
chr7 (214-250)||(2341811-2341847)
chr7 (144-212)||(11750058-11750126)
chr7 (218-250)||(20165963-20165995)
chr7 (158-186)||(24689146-24689174)
chr7 (216-248)||(31586848-31586880)
chr7 (218-250)||(37127939-37127971)
chr7 (216-248)||(40670563-40670595)
chr7 (128-215)||(45447567-45447657)
chr7 (214-250)||(45690246-45690282)
chr7 (218-250)||(49171511-49171543)
[»] chr2 (67 HSPs)
chr2 (78-215)||(42676481-42676613)
chr2 (78-215)||(30668860-30668991)
chr2 (78-215)||(21479422-21479552)
chr2 (78-215)||(39844156-39844289)
chr2 (128-215)||(40662740-40662827)
chr2 (82-215)||(14787217-14787344)
chr2 (78-215)||(30666277-30666408)
chr2 (142-211)||(43968563-43968632)
chr2 (78-215)||(30620569-30620699)
chr2 (78-215)||(30623190-30623320)
chr2 (126-215)||(15458962-15459051)
chr2 (142-215)||(30632219-30632292)
chr2 (155-215)||(7495600-7495660)
chr2 (135-188)||(43004941-43004994)
chr2 (82-208)||(20612717-20612836)
chr2 (156-215)||(43968226-43968285)
chr2 (209-250)||(2000475-2000516)
chr2 (78-187)||(3256148-3256251)
chr2 (213-250)||(12333633-12333670)
chr2 (146-215)||(36950336-36950405)
chr2 (214-250)||(2688867-2688903)
chr2 (210-250)||(27400395-27400435)
chr2 (144-215)||(7074897-7074968)
chr2 (125-215)||(1826772-1826862)
chr2 (142-215)||(9420273-9420347)
chr2 (165-215)||(21479225-21479275)
chr2 (216-250)||(28641430-28641464)
chr2 (214-248)||(40544216-40544250)
chr2 (216-250)||(40635216-40635250)
chr2 (216-250)||(43356097-43356131)
chr2 (217-250)||(145281-145314)
chr2 (158-215)||(3197007-3197064)
chr2 (213-250)||(35158188-35158225)
chr2 (214-250)||(6594607-6594643)
chr2 (214-250)||(12814610-12814646)
chr2 (214-250)||(26710341-26710377)
chr2 (218-250)||(27331298-27331330)
chr2 (214-250)||(32608376-32608412)
chr2 (214-250)||(39103043-39103079)
chr2 (218-250)||(39301335-39301367)
chr2 (214-250)||(40735460-40735496)
chr2 (215-250)||(10424592-10424627)
chr2 (215-250)||(13815367-13815402)
chr2 (215-250)||(21735038-21735073)
chr2 (215-250)||(27765000-27765035)
chr2 (215-250)||(28019970-28020005)
chr2 (142-189)||(45654973-45655020)
chr2 (216-250)||(746464-746498)
chr2 (216-250)||(2325038-2325072)
chr2 (216-250)||(4034590-4034624)
chr2 (216-250)||(4258488-4258522)
chr2 (217-247)||(8056625-8056655)
chr2 (216-250)||(12730059-12730093)
chr2 (216-250)||(27024413-27024447)
chr2 (216-250)||(27651183-27651217)
chr2 (214-248)||(28566838-28566872)
chr2 (216-250)||(29687039-29687073)
chr2 (217-250)||(7892837-7892870)
chr2 (213-250)||(23901774-23901811)
chr2 (217-250)||(38997100-38997133)
chr2 (218-250)||(3266296-3266328)
chr2 (214-250)||(15925076-15925112)
chr2 (214-250)||(17600832-17600868)
chr2 (143-187)||(31667564-31667608)
chr2 (218-250)||(32327361-32327393)
chr2 (216-248)||(43899110-43899142)
chr2 (216-248)||(45370988-45371020)
[»] chr8 (67 HSPs)
chr8 (79-215)||(1030396-1030528)
chr8 (78-215)||(35308082-35308215)
chr8 (146-215)||(13916548-13916617)
chr8 (78-215)||(5765311-5765448)
chr8 (127-215)||(6007687-6007775)
chr8 (127-215)||(27963970-27964058)
chr8 (142-215)||(27881328-27881401)
chr8 (142-215)||(27917551-27917624)
chr8 (142-215)||(28021509-28021582)
chr8 (142-215)||(40737441-40737514)
chr8 (128-215)||(5424786-5424874)
chr8 (128-215)||(5424478-5424565)
chr8 (125-215)||(17575213-17575304)
chr8 (156-215)||(27964830-27964889)
chr8 (82-187)||(1153646-1153744)
chr8 (78-215)||(17073302-17073433)
chr8 (78-215)||(17574837-17574968)
chr8 (158-215)||(342700-342757)
chr8 (125-215)||(40796166-40796258)
chr8 (128-215)||(17072969-17073057)
chr8 (128-215)||(5764896-5764983)
chr8 (127-189)||(8377046-8377108)
chr8 (142-215)||(15199745-15199818)
chr8 (143-212)||(28152484-28152553)
chr8 (145-215)||(28828037-28828109)
chr8 (214-250)||(27243277-27243313)
chr8 (214-250)||(27254852-27254888)
chr8 (210-250)||(32984226-32984266)
chr8 (158-197)||(1580312-1580351)
chr8 (215-250)||(2379138-2379173)
chr8 (156-215)||(27882195-27882254)
chr8 (156-215)||(28022375-28022434)
chr8 (216-250)||(9713688-9713722)
chr8 (210-248)||(25248032-25248070)
chr8 (78-215)||(27882395-27882527)
chr8 (78-215)||(28022575-28022707)
chr8 (216-250)||(31940314-31940348)
chr8 (213-250)||(41653891-41653928)
chr8 (218-250)||(117467-117499)
chr8 (214-250)||(5946044-5946080)
chr8 (214-250)||(10378306-10378342)
chr8 (127-215)||(32693537-32693625)
chr8 (214-250)||(37419937-37419973)
chr8 (215-250)||(3490537-3490572)
chr8 (215-250)||(22878389-22878424)
chr8 (215-250)||(41862218-41862253)
chr8 (215-250)||(45236714-45236749)
chr8 (216-250)||(4447433-4447467)
chr8 (216-250)||(6365985-6366019)
chr8 (216-250)||(12032951-12032985)
chr8 (78-116)||(27965031-27965069)
chr8 (216-250)||(37301474-37301508)
chr8 (216-250)||(37956420-37956454)
chr8 (216-250)||(41843252-41843286)
chr8 (216-250)||(43328706-43328740)
chr8 (217-250)||(2275913-2275946)
chr8 (162-215)||(6008044-6008097)
chr8 (159-196)||(24981542-24981579)
chr8 (158-187)||(32855173-32855202)
chr8 (210-239)||(36804094-36804123)
chr8 (217-250)||(39915961-39915994)
chr8 (217-250)||(40435302-40435335)
chr8 (217-250)||(40458910-40458943)
chr8 (218-250)||(2714550-2714582)
chr8 (218-250)||(17718871-17718903)
chr8 (218-250)||(31831104-31831136)
chr8 (218-250)||(33622603-33622635)
[»] chr6 (34 HSPs)
chr6 (128-215)||(21980923-21981010)
chr6 (126-215)||(2258689-2258778)
chr6 (78-190)||(26209163-26209269)
chr6 (93-212)||(7204759-7204872)
chr6 (125-179)||(7858507-7858561)
chr6 (214-250)||(13329378-13329414)
chr6 (214-250)||(28948983-28949019)
chr6 (79-203)||(9740531-9740646)
chr6 (146-215)||(10780177-10780246)
chr6 (142-215)||(33438680-33438752)
chr6 (214-250)||(1970708-1970744)
chr6 (218-250)||(3291009-3291041)
chr6 (78-186)||(3306922-3307024)
chr6 (214-250)||(8615237-8615273)
chr6 (214-250)||(16703363-16703399)
chr6 (214-250)||(22551210-22551246)
chr6 (215-250)||(599890-599925)
chr6 (211-250)||(960053-960092)
chr6 (215-250)||(19415682-19415717)
chr6 (215-250)||(28947085-28947120)
chr6 (210-248)||(3786742-3786780)
chr6 (216-250)||(5882505-5882539)
chr6 (216-250)||(15965432-15965466)
chr6 (216-250)||(19281204-19281238)
chr6 (146-212)||(26001257-26001323)
chr6 (216-250)||(26377353-26377387)
chr6 (216-250)||(30467752-30467786)
chr6 (215-248)||(929657-929690)
chr6 (142-187)||(5679070-5679115)
chr6 (218-250)||(2892189-2892221)
chr6 (214-250)||(11743093-11743129)
chr6 (216-248)||(24168090-24168122)
chr6 (218-250)||(30743597-30743629)
chr6 (158-194)||(32952541-32952577)
[»] scaffold0224 (2 HSPs)
scaffold0224 (126-205)||(22012-22091)
scaffold0224 (144-215)||(21696-21768)
[»] scaffold0024 (1 HSPs)
scaffold0024 (78-215)||(150138-150268)
[»] scaffold0721 (1 HSPs)
scaffold0721 (216-250)||(7089-7123)
[»] scaffold0376 (1 HSPs)
scaffold0376 (155-190)||(1955-1990)
[»] scaffold0271 (1 HSPs)
scaffold0271 (216-250)||(17905-17939)
[»] scaffold0267 (1 HSPs)
scaffold0267 (128-215)||(3246-3337)
[»] scaffold0155 (1 HSPs)
scaffold0155 (216-250)||(2581-2615)
[»] scaffold0100 (1 HSPs)
scaffold0100 (216-250)||(32560-32594)
[»] scaffold0092 (1 HSPs)
scaffold0092 (216-250)||(39705-39739)
[»] scaffold0035 (1 HSPs)
scaffold0035 (216-250)||(75393-75427)
[»] scaffold2003 (1 HSPs)
scaffold2003 (214-250)||(99-135)
[»] scaffold0394 (1 HSPs)
scaffold0394 (218-250)||(3089-3121)
[»] scaffold0076 (1 HSPs)
scaffold0076 (216-248)||(13913-13945)


Alignment Details
Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 1349805 - 1349671
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||||||||||   |||| | |||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  1349805 cttcaaatgagaagctgttaagagcagcttctcaaaaaa---tagatttttttttttagaggagagagaaaatatgatttaaaagattgaactaattttg 1349709  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| |||||| ||||| |||||||||||    
T  1349708 taacaaaaaatcccttttatatagttgtatccaaacaa 1349671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 19134906 - 19134775
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||||||||||   ||||   |||||||||||| | |||||||||||  |||||||||||||||||||||||    
T  19134906 cttcaaatgagaagctgttaagagcagcttctcaaaaaa---taga---ttttttgtagaggagagagaaaatattgtttaaaagattgaactaattttg 19134813  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| |||||| || || |||||||||||    
T  19134812 taacaaaaaatcccttttatataattgtatccaaacaa 19134775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 35039748 - 35039809
Alignment:
Q  154 ttttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  35039748 ttttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgtatccaaacaa 35039809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 19135160 - 19135031
Alignment:
Q  82 aaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaac 181  Q
    ||||||||| |||||||||  ||||||||||||||   ||||   |||||| ||||| | |||||||||||  |||||||||||||||||||||||||||    
T  19135160 aaatgagaagctgttaagaacagcttctcaaaaaa---taga---ttttttatagaggagagagaaaatatggtttaaaagattgaactaattttgtaac 19135067  T
Q  182 aa--aaaatcctttttatctagttatatccaaacaa 215  Q
    ||  ||||||  |||||| ||||| |||||||||||    
T  19135066 aaaaaaaatctcttttatatagttgtatccaaacaa 19135031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 35040394 - 35040484
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaa-tcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| |  ||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||    
T  35040394 attttttttagaggagggagaaaatatgatttaaaagattgaactaattttgtaacaaaaaattcccttttatatagttgtatccaaacaa 35040484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 4727860 - 4727934
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaa-aaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||| ||||||||| |||||||||||||||||||| |||||| |||||| ||||| ||| |||||||    
T  4727860 agagaaaatataatttaaaagaatgaactaattttgtaacaaacaaatcccttttatatagttgtattcaaacaa 4727934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 5249453 - 5249367
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaac 213  Q
    |||||| ||||| | ||| |||||||  ||||||||||||||||||||||| |||||||||||| |||||| ||||| ||| |||||    
T  5249453 ttttttttagagtagagaaaaaatatgatttaaaagattgaactaattttgcaacaaaaaatcccttttatatagttgtattcaaac 5249367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 5246602 - 5246529
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||   |||||||||||||||||||||||||| ||||||||  |||||| ||||| |||||||||||    
T  5246602 agagaaaataaggtttaaaagattgaactaattttgtaaaaaaaaatctcttttatatagttgtatccaaacaa 5246529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 35041073 - 35041000
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||   ||||| ||||| ||||| |||||    
T  35041073 agagaaaatattttttaaaagattgaactaattttgtaacataaaatctcatttatatagttgtatcctaacaa 35041000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 35781457 - 35781386
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaac 213  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||   |||||| ||||| |||||||||    
T  35781457 agagaaaatatgatttaaaagattaaactaattttgtaacaaaaaatatattttatatagttgtatccaaac 35781386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 43583114 - 43583006
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||| ||||| ||||| ||||||||||   ||||||    ||||| |||||    ||||||||||  || ||||||||||||||||||||    
T  43583114 cttcaaatgagaaattgttatgagtaacttctcaaaa---tataga----tttttttagag----gagaaaatatgattcaaaagattgaactaattttg 43583026  T
Q  178 taacaaaaaatcctttttat 197  Q
    ||||||||||||| ||||||    
T  43583025 taacaaaaaatcccttttat 43583006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 6429477 - 6429567
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaa-atcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| | |||||||||||   | ||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||| |||||    
T  6429477 attttttttagaggagagagaaaatatggatcaaaagattgaactaattttgtaacaaaaatatcgtttttatatagttgtatcctaacaa 6429567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 40591458 - 40591330
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| |||||||||||||| |       ||||||| |||||   |||||||||||  ||||||| |||| ||||||||||    
T  40591458 cttcaaatgagaagctgttaagagcagcttctcaaaaaattg------attttttttagag---agagaaaatatggtttaaaaaattgtactaattttg 40591368  T
Q  178 taacaa-aaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||||| |||||  ||||| |||||||||||    
T  40591367 taacaaaaaaatccctttta-atagttgtatccaaacaa 40591330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 27503376 - 27503412
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  27503376 aaggttttttctaaattacctttgaagaatggtgggt 27503412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 28794077 - 28794017
Alignment:
Q  155 tttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||| |||||||||||| ||||||||  ||||| ||||| |||||||||||    
T  28794077 tttaaaagattgaaataattttgtaacgaaaaatcccgtttatatagttgtatccaaacaa 28794017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 34383482 - 34383394
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||| | ||||||||||    ||||||||||||| | |||||||||||||| |||| |||||| ||||| |||||||||||    
T  34383482 ttttttttagaggagagagaaaataaggcttaaaagattgaattgattttgtaacaaaatatcccttttatatagttgtatccaaacaa 34383394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 13957668 - 13957703
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  13957668 aggttttttctaaattacctttgaagaatggtgggt 13957703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 42247955 - 42247920
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  42247955 aggttttttctaaattacctttgaagaatggtgggt 42247920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 9424764 - 9424730
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  9424764 ggttttttctaaattacctttgaagaatggtgggt 9424730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 17367517 - 17367555
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaa 116  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  17367517 cttcaaatgagaagctgttaagagtagcttctcaaaaaa 17367555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 25458472 - 25458577
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||  ||||||  ||||||||| ||||||   |||| ||||||||  |||| | |||||||||||   | ||||||||||||||||||||    
T  25458472 cttcaaatgagaagttgttaatggtagcttctaaaaaaa---taga-tatttttt--agaggagagagaaaatatggatcaaaagattgaactaattttg 25458565  T
Q  178 taacaaaaaatc 189  Q
    ||||||||||||    
T  25458566 taacaaaaaatc 25458577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 35626037 - 35626071
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  35626037 ggttttttctaaattacctttgaagaatggtgggt 35626071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 36365617 - 36365583
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  36365617 ggttttttctaaattacctttgaagaatggtgggt 36365583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 38184364 - 38184307
Alignment:
Q  157 taaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||||| || ||||||||    
T  38184364 taaaagattgaagtaattttgtaacaaaaaatcc-ttttatatagttgtacccaaacaa 38184307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 38213993 - 38214050
Alignment:
Q  157 taaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||||| || ||||||||    
T  38213993 taaaagattgaagtaattttgtaacaaaaaatcc-ttttatatagttgtacccaaacaa 38214050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 6973063 - 6973096
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  6973063 gttttttctaaattacctttgaagaatggtgggt 6973096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 18585740 - 18585695
Alignment:
Q  170 taattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||||||| ||||||| ||||| |||||||||||    
T  18585740 taattttgtaacaaaaaatcgtttttatatagttgtatccaaacaa 18585695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 4149691 - 4149727
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  4149691 aaggttttttctatattacctttgaagaatggtgggt 4149727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 12545876 - 12545936
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaa 187  Q
    |||||| ||||| | |||||||||||| ||||||| |||||||||| ||||||| ||||||    
T  12545876 ttttttttagaggagagagaaaatataatttaaaatattgaactaaatttgtaataaaaaa 12545936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 19295727 - 19295763
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||| ||||||||||    
T  19295727 aaggttttttctaaattacctttgaaaaatggtgggt 19295763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 24253379 - 24253415
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24253379 aaggttttttctagattacctttgaagaatggtgggt 24253415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 25831518 - 25831554
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  25831518 aaggttttttctagattacctttgaagaatggtgggt 25831554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 38015684 - 38015652
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||    
T  38015684 ttttttctaaattacctttgaagaatggtgggt 38015652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 42658836 - 42658800
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||||    
T  42658836 aaggttttttcaaaattacctttgaagaatggtgggt 42658800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 43262368 - 43262332
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43262368 aaggttttttctatattacctttgaagaatggtgggt 43262332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 43326564 - 43326528
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43326564 aaggttttttctagattacctttgaagaatggtgggt 43326528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 3466865 - 3466830
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  3466865 aggttttttctagattacctttgaagaatggtgggt 3466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 5137713 - 5137748
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  5137713 aggttttttctagattacctttgaagaatggtgggt 5137748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 5497271 - 5497306
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||| ||||||||||||||||||    
T  5497271 aggttttttctaaattatctttgaagaatggtgggt 5497306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 250
Target Start/End: Complemental strand, 36472461 - 36472422
Alignment:
Q  211 aacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  36472461 aacaaggttttttctagattacctttgaaaaatggtgggt 36472422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 5184971 - 5185005
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  5184971 ggttttttctagattacctttgaagaatggtgggt 5185005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 250
Target Start/End: Complemental strand, 9171193 - 9171163
Alignment:
Q  220 ttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||    
T  9171193 ttttctaaattacctttgaagaatggtgggt 9171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 12558203 - 12558169
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||| |||||||||||||||||||||    
T  12558203 aaggttttttctagattacctttgaagaatggtgg 12558169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 23195420 - 23195386
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||| |||||||||||||    
T  23195420 ggttttttctaaattacctttaaagaatggtgggt 23195386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 33617584 - 33617618
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||| ||||||||||    
T  33617584 ggttttttctaaattacctttgaaaaatggtgggt 33617618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 38494602 - 38494512
Alignment:
Q  127 ttttttgtagagcaaagagaaaat-atattttaaaagattgaactaattttgtaacaa-aaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||| ||||||||||| | || | |||||||| ||||| ||||||||||| ||||||| |||||| ||| | |||||||||||    
T  38494602 ttttttttagagaaaagagaaaattaaatgtcaaaagattaaactagttttgtaacaaaaaaatcccttttatatagatgtatccaaacaa 38494512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 40886210 - 40886176
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  40886210 ggttttttctagattacctttgaagaatggtgggt 40886176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 739889 - 739856
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtg 247  Q
    ||||||||||||| ||||||||||||||||||||    
T  739889 aaggttttttctagattacctttgaagaatggtg 739856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 6901796 - 6901832
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  6901796 aaggttttttctagattatctttgaagaatggtgggt 6901832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 9374672 - 9374640
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||| ||||||||||    
T  9374672 ttttttctaaattacctttgaaaaatggtgggt 9374640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 15398663 - 15398631
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  15398663 ttttttctagattacctttgaagaatggtgggt 15398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 18479849 - 18479817
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  18479849 ttttttctagattacctttgaagaatggtgggt 18479817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 35040230 - 35040170
Alignment:
Q  155 tttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| |||||||||| ||||||||||||||| | |||||| | |||  ||||||||||    
T  35040230 tttaaaatattgaactaaatttgtaacaaaaaattccttttatatggttgaatccaaacaa 35040170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 40110231 - 40110267
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  40110231 aaggttttttctatattacatttgaagaatggtgggt 40110267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 54982034 - 54981903
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||||||||||  |      ||||||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  54982034 cttcaaatgagaagctgttaagagcagcttctcaaaaaataa------attttttttagaggagagagaaaatatattttaaaagattgaactaattttg 54981941  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| |||||| ||||| |||| ||||||    
T  54981940 taacaaaaaatccgttttatatagttgtatcaaaacaa 54981903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 54356374 - 54356285
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| | |||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  54356374 attttttttagaggagagagaaaatatgatttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttatatccaaacaa 54356285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 8708166 - 8708034
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||||||||||   |||| | ||||||  |||| | |||||||||||  |||||||||||||||||||||||    
T  8708166 cttcaaatgagaagctgttaagagcagcttctcaaaaaa---tagattttttttt--agaggagagagaaaatatgatttaaaagattgaactaattttg 8708072  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||   |||||| ||||| |||| ||||||    
T  8708071 taacaaaaaatttcttttatatagttgtatcaaaacaa 8708034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 9060053 - 9059921
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||||||||||   |||| | ||||||  |||| | |||||||||||  |||||||||||||||||||||||    
T  9060053 cttcaaatgagaagctgttaagagcagcttctcaaaaaa---tagattttttttt--agaggagagagaaaatatgatttaaaagattgaactaattttg 9059959  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||   |||||| ||||| |||| ||||||    
T  9059958 taacaaaaaatttcttttatatagttgtatcaaaacaa 9059921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 76 - 215
Target Start/End: Original strand, 21388358 - 21388491
Alignment:
Q  76 atcttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattt 175  Q
    ||||| ||||||||| |||||||||| | ||||||||||||      |  ||||||| ||||| | |||||||||||  |||||||||||||||||||||    
T  21388358 atctttaaatgagaagctgttaagagcaacttctcaaaaaa------aagattttttttagaggagagagaaaatattgtttaaaagattgaactaattt 21388451  T
Q  176 tgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    | ||||||||||||| |||||| ||||| |||||||||||    
T  21388452 tataacaaaaaatcccttttatatagttgtatccaaacaa 21388491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 216
Target Start/End: Original strand, 7433541 - 7433672
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| |||||| |||||||   ||    ||||||  ||||| |||||||||||||  ||||||||||| |||||||||||    
T  7433541 cttcaaatgagaagctgttaagagaagcttcgcaaaaaa---ta----atttttcttagagaaaagagaaaatatgatttaaaagattaaactaattttg 7433633  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaag 216  Q
    ||||||||||| | |||||| ||||| ||||||||||||    
T  7433634 taacaaaaaattcattttatatagttgtatccaaacaag 7433672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 12101166 - 12101077
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| | |||||||||||  ||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||    
T  12101166 attttttttagagaagagagaaaatattgtttaaaagattgaactaattttgtaacaaaacatctcttttatatagttatatccaaacaa 12101077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 3942515 - 3942649
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaag-attgaactaatttt 176  Q
    |||||||||| || |||||||||| ||||||||||||||   |||| | |||||| || || | ||||||||||| |||| |||| ||||||||||||||    
T  3942515 cttcaaatgaaaagctgttaagagcagcttctcaaaaaa---tagattttttttt-tatagtagagagaaaatatttttttaaaggattgaactaatttt 3942610  T
Q  177 gtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||| |||||| ||||| ||| |||||||    
T  3942611 gtaacaaaaaatcccttttatatagttgtattcaaacaa 3942649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 10333190 - 10333117
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||    
T  10333190 agagaaaatattgtttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgtatctaaacaa 10333117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 44077782 - 44077873
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaac--aaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| | |||||||||||| |||||||||||||||||||||||||||  ||||||| | |||||| ||||| |||||||||||    
T  44077782 attttttttagagaagagagaaaatataatttaaaagattgaactaattttgtaacaaaaaaaatacattttatatagttgtatccaaacaa 44077873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 47567576 - 47567708
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||| ||  ||||||||| ||||||| ||||||  |||||   |||||| ||||| | |||||||||||   ||||||||||||||||| ||||    
T  47567576 cttcaaatgaaaagttgttaagagcagcttctaaaaaaa--ataga---ttttttttagaggagagagaaaatattgcttaaaagattgaactaactttg 47567670  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| |||||| ||||  |||||||||||    
T  47567671 taacaaaaaatcccttttatatagtagtatccaaacaa 47567708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 54143140 - 54143011
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||| | ||| ||||||||||   ||   |||||| | ||||| | |||||||||||  ||||||| |||||||||||||||    
T  54143140 cttcaaatgagaagctgttaagcgcagcctctcaaaaaa---ta---tattttgtttagaggagagagaaaatattgtttaaaaaattgaactaattttg 54143047  T
Q  178 taacaaaaaatcctttttatctagttatatccaaac 213  Q
    ||||||||||||| |||||| ||||  |||||||||    
T  54143046 taacaaaaaatccattttatatagtcgtatccaaac 54143011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 11633209 - 11633080
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||| ||  ||||||||| ||||||||||||||   ||||   |||||| ||||| |  ||||||||||  |||||||||||||||||||||||    
T  11633209 cttcaaatgaaaagttgttaagagcagcttctcaaaaaa---taga---ttttttttagagga--gagaaaatatgatttaaaagattgaactaattttg 11633118  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||| ||||||||  |||||| ||||| |||||||||||    
T  11633117 taataaaaaatctcttttatatagttgtatccaaacaa 11633080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 23027534 - 23027630
Alignment:
Q  82 aaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaac 181  Q
    |||||||||||||||||||| ||||||||||||||   ||||   |||| | ||||| | |||||||||||  |||||||||||||||||||||||||||    
T  23027534 aaatgagaaactgttaagagcagcttctcaaaaaa---taga---ttttctttagaggagagagaaaatatgatttaaaagattgaactaattttgtaac 23027627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 21459704 - 21459642
Alignment:
Q  141 aagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagtt 203  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||| | |||||| |||||    
T  21459704 aagagaaaatatgttttaaaagattaaactaattttgtaacaaaaaattccttttatatagtt 21459642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 10332667 - 10332755
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| | |||||||||||  ||| ||| ||||||||||||||||||| |||||||| |||||| ||||| |||||||||||    
T  10332667 attttttttagaggagagagaaaatattattttaaacattgaactaattttgtaac-aaaaatcccttttatatagttgtatccaaacaa 10332755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 24842422 - 24842552
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||  ||||||||| | ||||||||||||   ||||   |||||| ||||| |  ||||||||||  ||||||| |||||||||||||||    
T  24842422 cttcaaatgagaagttgttaagagcatcttctcaaaaaa---taga---ttttttttagaggagggagaaaatatgatttaaaatattgaactaattttg 24842515  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||| |  |||||| ||||| |||||||||||    
T  24842516 taacaaaaaa-ctcttttatatagttgtatccaaacaa 24842552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 34794410 - 34794513
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||| | ||||||| ||||||||||||||   ||||   |||||| ||||| | ||||||||||| ||||||||||||||||| || |||    
T  34794410 cttcaaatgagaaaatattaagagcagcttctcaaaaaa---taga---ttttttttagaggagagagaaaatattttttaaaagattgaactcatcttg 34794503  T
Q  178 taacaaaaaa 187  Q
    ||| ||||||    
T  34794504 taaaaaaaaa 34794513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 46515173 - 46515067
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||  ||||||||  ||||||||||||||   |||| |||||||| ||||| | |||||||||||  ||||||| |||||||||||||||    
T  46515173 cttcaaatgagaagttgttaagaacagcttctcaaaaaa---taga-tatttttt-tagaggagagagaaaatatggtttaaaatattgaactaattttg 46515079  T
Q  178 taacaaaaaatc 189  Q
    || |||||||||    
T  46515078 tatcaaaaaatc 46515067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 10297191 - 10297279
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttt-tatctagttatatccaaacaa 215  Q
    ||||| ||||| | |||||||||||  |||||||||||||||||||||||||||| |||  |||||| ||| ||||| |||||||||||    
T  10297191 tttttttagaggagagagaaaatattatttaaaagattgaactaattttgtaacagaaatcccttttatatatagttgtatccaaacaa 10297279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 51415963 - 51416002
Alignment:
Q  211 aacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  51415963 aacaaggttttttctaaattacctttgaagaatggtgggt 51416002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 30498379 - 30498509
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||  |||||||||||||||||||||||   ||| | |||||    ||||| | ||||||||||||  | |||| ||||||||||||||     
T  30498379 cttcaaatgagaagttgttaagagtagcttctcaaaaa---ataaattattt----tagaggagagagaaaatatagatcaaaatattgaactaatttta 30498471  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||||  |||||| ||||| |||| ||||||    
T  30498472 taacagaaaatctcttttatatagttgtatcaaaacaa 30498509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 40285041 - 40285111
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaa 212  Q
    |||||||||||  ||||||| |||||| ||||||||||||||||||| | |||||| ||||| ||||||||    
T  40285041 agagaaaatatgatttaaaatattgaattaattttgtaacaaaaaattccttttatatagttgtatccaaa 40285111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 53877730 - 53877664
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatc 208  Q
    |||||||||||  |||||||||||||||| |||||| |||||| ||||| |||||| ||||||||||    
T  53877730 agagaaaatatgatttaaaagattgaactgattttgcaacaaataatcccttttatatagttatatc 53877664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 54981604 - 54981677
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||| ||||||||||||||||||||||| ||  ||||||| ||||||| || || |||| ||||||    
T  54981604 agagaaaatataatttaaaagattgaactaattttgcaatgaaaaatcatttttatataattgtatcaaaacaa 54981677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 34279895 - 34279859
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  34279895 aaggttttttctaaattacctttgaagaatggtgggt 34279859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 51224211 - 51224175
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  51224211 aaggttttttctaaattacctttgaagaatggtgggt 51224175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 54707394 - 54707358
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  54707394 aaggttttttctaaattacctttgaagaatggtgggt 54707358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 24485606 - 24485665
Alignment:
Q  156 ttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||| ||||||||||||||| |  |||||| ||||| |||||||||||    
T  24485606 ttaaaagattgaactagttttgtaacaaaaaacctattttatatagttgtatccaaacaa 24485665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 25641644 - 25641679
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  25641644 aggttttttctaaattacctttgaagaatggtgggt 25641679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 28048576 - 28048541
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  28048576 aggttttttctaaattacctttgaagaatggtgggt 28048541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 33832873 - 33832814
Alignment:
Q  156 ttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| ||||||||| ||||||||||  |||||| ||||| |||||||||||    
T  33832873 ttaaaagattgaattaattttgtgacaaaaaatctcttttatatagttgtatccaaacaa 33832814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 250
Target Start/End: Complemental strand, 40131147 - 40131108
Alignment:
Q  211 aacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  40131147 aacaaggttttttctagattacctttgaagaatggtgggt 40131108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 20754576 - 20754542
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  20754576 ggttttttctaaattacctttgaagaatggtgggt 20754542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 41635972 - 41635938
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  41635972 ggttttttctaaattacctttgaagaatggtgggt 41635938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 42589829 - 42589863
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  42589829 ggttttttctaaattacctttgaagaatggtgggt 42589863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 45586205 - 45586143
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaat 188  Q
    ||||||| ||||| | || ||||||||  || |||||||||||||||||||||||||||||||    
T  45586205 attttttttagaggagagtgaaaatatggttcaaaagattgaactaattttgtaacaaaaaat 45586143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 47809780 - 47809746
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  47809780 ggttttttctaaattacctttgaagaatggtgggt 47809746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 10297502 - 10297429
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||  ||| ||| |||||||||||||||||||||||||||  |||||| || || |||| ||||||    
T  10297502 agagaaaatatggttttaaaaattgaactaattttgtaacaaaaaatctcttttatatatttgtatcaaaacaa 10297429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 17665699 - 17665662
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||| |||||||||||||||    
T  17665699 caaggttttttctaaattacctatgaagaatggtgggt 17665662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 26167898 - 26167961
Alignment:
Q  155 tttaaaagattgaactaattttgtaac---aaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||||||||||||||   ||||||||  |||||| ||||| |||||||||||    
T  26167898 tttaaaagattgaactaattttgtaacaaaaaaaaatctcttttatatagttgtatccaaacaa 26167961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 38156803 - 38156770
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  38156803 gttttttctaaattacctttgaagaatggtgggt 38156770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 5560217 - 5560181
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  5560217 aaggttttttctagattacctttgaagaatggtgggt 5560181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 10317043 - 10317087
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaa 186  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||    
T  10317043 agagaaaatattatttaaaagattaaactaattttgtaacaaaaa 10317087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 24100280 - 24100316
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24100280 aaggttttttctagattacctttgaagaatggtgggt 24100316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 29626012 - 29625976
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29626012 aaggttttttctagattacctttgaagaatggtgggt 29625976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 31286963 - 31286931
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||    
T  31286963 ttttttctaaattacctttgaagaatggtgggt 31286931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 32234582 - 32234546
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  32234582 aaggttttttctagattacctttgaagaatggtgggt 32234546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 37313396 - 37313432
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37313396 aaggttttttctagattacctttgaagaatggtgggt 37313432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 37324538 - 37324570
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggt 246  Q
    |||||||||||||||||||||||||||||||||    
T  37324538 aaggttttttctaaattacctttgaagaatggt 37324570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 41464349 - 41464385
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41464349 aaggttttttctagattacctttgaagaatggtgggt 41464385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 43125828 - 43125864
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43125828 aaggttttttctagattacctttgaagaatggtgggt 43125864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 49130575 - 49130611
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||| ||||||||||    
T  49130575 aaggttttttctaaattacctttgaaaaatggtgggt 49130611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 51102563 - 51102527
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  51102563 aaggttttttctagattacctttgaagaatggtgggt 51102527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 54159177 - 54159137
Alignment:
Q  210 aaacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  54159177 aaacaaggttttttctagattacttttgaagaatggtgggt 54159137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 22399095 - 22399130
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  22399095 aggttttttctagattacctttgaagaatggtgggt 22399130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 42291840 - 42291875
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  42291840 aggttttttctagattacctttgaagaatggtgggt 42291875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 47511113 - 47511078
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||| ||||||||||    
T  47511113 aggttttttctaaattacctttgaaaaatggtgggt 47511078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 47567774 - 47567829
Alignment:
Q  160 aagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| |||||| ||||||||||||||||| |||||| ||||  |||||||||||    
T  47567774 aagattaaactaactttgtaacaaaaaatcccttttatatagtagtatccaaacaa 47567829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 49330035 - 49330070
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  49330035 aggttttttctagattacctttgaagaatggtgggt 49330070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 2665999 - 2666033
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  2665999 ggttttttctagattacctttgaagaatggtgggt 2666033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 7755489 - 7755455
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  7755489 ggttttttctagattacctttgaagaatggtgggt 7755455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 10334333 - 10334295
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaa 116  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  10334333 cttcaaatgagaagctgttaagagcagcttctcaaaaaa 10334295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 39053393 - 39053427
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  39053393 ggttttttctagattacctttgaagaatggtgggt 39053427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 39141298 - 39141264
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||| |||||||||||||||||    
T  39141298 ggttttttctaaattacttttgaagaatggtgggt 39141264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 44806683 - 44806717
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  44806683 ggttttttctagattacctttgaagaatggtgggt 44806717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 47257792 - 47257826
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  47257792 ggttttttctagattacctttgaagaatggtgggt 47257826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 48726170 - 48726136
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||| |||||||||||||    
T  48726170 ggttttttctaaattacctttaaagaatggtgggt 48726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 54401186 - 54401220
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||| ||||||||||||||||||||||||||    
T  54401186 ggttttttttaaattacctttgaagaatggtgggt 54401220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 55000350 - 55000316
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||| ||||||||||||||    
T  55000350 ggttttttctaaattaccttagaagaatggtgggt 55000316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 27067160 - 27067127
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  27067160 gttttttctagattacctttgaagaatggtgggt 27067127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 42583670 - 42583609
Alignment:
Q  155 tttaaaagattgaactaa-ttttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||||| |||| ||||||||||||  |||||| ||||| ||| |||||||    
T  42583670 tttaaaagattgaactaatttttataacaaaaaatctcttttatatagttgtattcaaacaa 42583609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 51452932 - 51452899
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  51452932 gttttttctagattacctttgaagaatggtgggt 51452899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 2788434 - 2788522
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||   ||||||||||  | ||||||||| ||  |||||||| |||||||||||  |||||  ||||| |||||||||||    
T  2788434 ttttttgtagaggggagagaaaataagtattaaaagatggagataattttgaaacaaaaaatcacttttacatagttgtatccaaacaa 2788522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 7855299 - 7855263
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  7855299 aaggttttttctagattacttttgaagaatggtgggt 7855263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 25353551 - 25353587
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  25353551 aaggttttttctagattacctttgaaaaatggtgggt 25353587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 37028720 - 37028756
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||| |||||||||||||    
T  37028720 aaggttttttttaaattacctttaaagaatggtgggt 37028756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 40643799 - 40643831
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||||||| ||||||||||||||||    
T  40643799 ggttttttctaaattatctttgaagaatggtgg 40643831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 40804691 - 40804659
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  40804691 ttttttctagattacctttgaagaatggtgggt 40804659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 48547014 - 48546978
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  48547014 aaggttttttctagattatctttgaagaatggtgggt 48546978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 52638839 - 52638875
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  52638839 aaggttttttctagattacctttaaagaatggtgggt 52638875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 53943770 - 53943738
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||| |||||||||||||||||||||    
T  53943770 ggttttttctagattacctttgaagaatggtgg 53943738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 55453429 - 55453393
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||  ||||||||||||||||||||||    
T  55453429 aaggttttttctaggttacctttgaagaatggtgggt 55453393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 106019 - 106149
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||  | ||||||||||||   ||||    ||||||||||| | |||||||||||  |||||||||||||||||||||||    
T  106019 cttcaaatgagaagctgttaagaacaccttctcaaaaaa---taga----tttttgtagaggagagagaaaatatgatttaaaagattgaactaattttg 106111  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  106112 taacaaaaaatcctttttatatagttgtatccaaacaa 106149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 205391 - 205261
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| | |||||||| ||||||||||||||   ||||   |||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  205391 cttcaaatgagaagccgttaagagcagcttctcaaaaaa---taga---ttttttttagaggagagagaaaatattgtttaaaagattgaactaattttg 205298  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||| | |||||| ||||| |||| ||||||    
T  205297 taacaaaaaattc-ttttatatagttgtatctaaacaa 205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 54175981 - 54175850
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| | |||||||| ||||||||||||||   ||||   |||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  54175981 cttcaaatgagaagcggttaagagcagcttctcaaaaaa---taga---ttttttttagaggagagagaaaatatggtttaaaagattgaactaattttg 54175888  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| |||||| ||||| |||||||||||    
T  54175887 taacaaaaaatcccttttatatagttgtatccaaacaa 54175850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 7238838 - 7238968
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||||||| |||||| ||||||||||||||  |      ||||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  7238838 cttcaaatgagaaactgctaagagcagcttctcaaaaaataa------atttttt-tagaggagagagaaaatattgtttaaaagattgaactaattttg 7238930  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||| ||| |||||| ||||| |||||||||||    
T  7238931 taacaaaaattcccttttatatagttgtatccaaacaa 7238968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 41692576 - 41692449
Alignment:
Q  82 aaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaac 181  Q
    ||||||||| |||||||||| | ||||||||||||   ||   |||||||| ||||| | |||||||||||  |||||||||||||| ||||||||||||    
T  41692576 aaatgagaagctgttaagagcatcttctcaaaaaa---ta---tattttttttagaggagagagaaaatatgatttaaaagattgaattaattttgtaac 41692483  T
Q  182 aaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||| || || |||||||||||    
T  41692482 aaaaaatcctttttatataattgtatccaaacaa 41692449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 19298461 - 19298595
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||||||||||   |||| | ||||||  |||| | |||||||||||  |||||||||||||||||||||||    
T  19298461 cttcaaatgagaagctgttaagagcagcttctcaaaaaa---tagattttttttt--agaggagagagaaaatatgatttaaaagattgaactaattttg 19298555  T
Q  178 taac--aaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||  ||||||||| |||||| ||||| ||| |||||||    
T  19298556 taacaaaaaaaatcccttttatatagttgtattcaaacaa 19298595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 212
Target Start/End: Complemental strand, 44886319 - 44886190
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| ||||||| || ||||||||||||||   |||| |   |||||||||| | |||||||||||  |||||||||||||||||||||||    
T  44886319 cttcaaatgagaagctgttaaaagcagcttctcaaaaaa---tagaat---ttttgtagaggagagagaaaatatgatttaaaagattgaactaattttg 44886226  T
Q  178 taacaa-aaaatcctttttatctagttatatccaaa 212  Q
    |||||| ||||||| |||||| ||||| ||||||||    
T  44886225 taacaaaaaaatcccttttatatagttgtatccaaa 44886190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 41104104 - 41104035
Alignment:
Q  125 tattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttt 194  Q
    |||||||| ||||| |||||||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  41104104 tattttttttagaggaaagagaaaatatgatttaaaagattgaactaattttgtaacaaaaagtcctttt 41104035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 49897342 - 49897431
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| |  ||||||||||  |||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||    
T  49897342 attttttttagaggagggagaaaatattgtttaaaagattgaactaattttgtaacaaataatcccttttatatagttgtatccaaacaa 49897431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 50715778 - 50715691
Alignment:
Q  129 ttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaa-aaaatcctttttatctagttatatccaaacaa 215  Q
    |||| ||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| ||| | |||||||||||    
T  50715778 ttttttagaggagagagaaaatatatttaaaaagattgaactaattttgtaacaaaaaaatcccttttatataggtgtatccaaacaa 50715691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 11126108 - 11125977
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| | ||||||||||||  |||||    ||||| ||||| | ||||| ||||| ||||||||||||||||||||||||    
T  11126108 cttcaaatgagaagctgttaagagcatcttctcaaaaaa--ataga----tttttttagaggagagagataatattttttaaaagattgaactaattttg 11126015  T
Q  178 taacaaaaaatcct-ttttatctagttatatccaaacaa 215  Q
    ||| ||||||| || |||||| ||||| ||| |||||||    
T  11126014 taa-aaaaaatactcttttatgtagttgtattcaaacaa 11125977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 12928656 - 12928566
Alignment:
Q  126 attttttgtagagcaaagagaaaat-atattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| | ||||||||| | || |||||||||||||||||||||||||||||||||| ||||| | ||| | |||||||||||    
T  12928656 attttttttagaggacagagaaaatcaaatgttaaaagattgaactaattttgtaacaaaaaatcatttttttatagatgtatccaaacaa 12928566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 39136045 - 39136131
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaa 212  Q
    ||||||| ||||| | |||||||||||  |||||| |||||||||||| ||||||||||||||  ||||||| ||||| ||||||||    
T  39136045 attttttttagaggagagagaaaatatgatttaaacgattgaactaatattgtaacaaaaaattatttttatatagttgtatccaaa 39136131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 54806864 - 54806918
Alignment:
Q  161 agattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  54806864 agattgaactaattttataacaaaaaatccattttatatagttatatccaaacaa 54806918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 2494082 - 2494155
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||  ||||||| |||||| ||||||||||||||||||||  |||||| ||||| |||||||||||    
T  2494082 agagaaaatatgatttaaaatattgaattaattttgtaacaaaaaatctcttttatatagttgtatccaaacaa 2494155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 4780642 - 4780731
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| | ||| | |||||  |||||||||||||||||||||||||| ||||||||  |||||| ||||| |||||||||||    
T  4780642 attttttttagaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaa 4780731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 6046362 - 6046469
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| |||||||||||||   ||||| | |||||   |||| ||||||||||||   ||| ||||||||||||||||||     
T  6046362 cttcaaatgagaagctgttaagagcagcttctcaaaaa---atagattttttttaaaagag-aaagagaaaataatgtttgaaagattgaactaatttta 6046457  T
Q  178 taacaaaaaatc 189  Q
    ||||||||||||    
T  6046458 taacaaaaaatc 6046469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 53130875 - 53130932
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||    
T  53130875 aaaagattgaactaattttgtaacaaaaaatctcttttatatagttgtatccaaacaa 53130932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 29100928 - 29100838
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgta---acaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | |||||||||||| |||||||||||||||||||||||||   | |||||||  ||||||| ||||| |||||||||||    
T  29100928 tttttttagaggagagagaaaatataatttaaaagattgaactaattttgtaaacaaaaaaaattatttttatatagttgtatccaaacaa 29100838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 36889662 - 36889750
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||| | |||||||| | |  |||||||||||||||||||||||||||||||||| |||||||   ||| |||||||||||    
T  36889662 ttttttttagaggagagagaaaacaaaggttaaaagattgaactaattttgtaacaaaaaatcatttttataccgttgtatccaaacaa 36889750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 11125327 - 11125268
Alignment:
Q  156 ttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||||||||||||| || |||||||| |||||| ||||| |||||||||||    
T  11125327 ttaaaagattgaactaattttgttactaaaaatcccttttatatagttgtatccaaacaa 11125268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 33802977 - 33803024
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatc 189  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  33802977 agagaaaatatgtattaaaagattgaactaattttgtaacaaaaaatc 33803024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 660256 - 660184
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||| |||||||||||| |||||||||||||| | ||||||| |||||| ||||| ||| |||||||    
T  660256 agagaaaatattttttaaaagattaaactaattttgtaa-ataaaatcccttttatgtagttgtattcaaacaa 660184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 9519151 - 9519061
Alignment:
Q  92 ctgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatc 189  Q
    |||||||||| ||||||||||||||   |||| |||||||   |||| | || ||||||||  |||||||||||||||||||||||||||||||||||    
T  9519151 ctgttaagagcagcttctcaaaaaa---taga-tattttt---agaggagagggaaaatatgatttaaaagattgaactaattttgtaacaaaaaatc 9519061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 11972303 - 11972267
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  11972303 aaggttttttctaaattacctttgaagaatggtgggt 11972267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 29618335 - 29618255
Alignment:
Q  135 agagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||| ||||||||||||  ||| |||||||| |||||||||||||| || ||||| ||||||| ||||| |||| ||||||    
T  29618335 agaggaaagagaaaataggtttcaaaagattaaactaattttgtaataacaaatcttttttatatagttgtatctaaacaa 29618255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 37239264 - 37239228
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  37239264 aaggttttttctaaattacctttgaagaatggtgggt 37239228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 43495978 - 43495876
Alignment:
Q  79 ttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgt 178  Q
    ||||||| |||| |||||||||| |||||||||||||    ||||   | |||| ||||| | ||||||||||| |||||||||||| ||||||||||||    
T  43495978 ttcaaataagaagctgttaagagcagcttctcaaaaat---taga---tcttttttagaggagagagaaaatatgttttaaaagattaaactaattttgt 43495885  T
Q  179 aacaaaaaa 187  Q
    || ||||||    
T  43495884 aataaaaaa 43495876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 15060461 - 15060427
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  15060461 ggttttttctaaattacctttgaagaatggtgggt 15060427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 27873720 - 27873686
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  27873720 ggttttttctaaattacctttgaagaatggtgggt 27873686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 34552318 - 34552352
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  34552318 ggttttttctaaattacctttgaagaatggtgggt 34552352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 54216310 - 54216344
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||||||||||||||||||||||||||    
T  54216310 aaggttttttctaaattacctttgaagaatggtgg 54216344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 5117609 - 5117576
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  5117609 gttttttctaaattacctttgaagaatggtgggt 5117576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 29993417 - 29993466
Alignment:
Q  145 gaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttt 194  Q
    |||||||  ||| |||||||||||||||||||||||||||||||| ||||    
T  29993417 gaaaataagtttcaaaagattgaactaattttgtaacaaaaaatcatttt 29993466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 34276547 - 34276580
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  34276547 gttttttctaaattacctttgaagaatggtgggt 34276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 50233994 - 50234031
Alignment:
Q  211 aacaaggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||||||| |||||||||||||||||||||    
T  50233994 aacaaggttttttctagattacctttgaagaatggtgg 50234031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 54805804 - 54805767
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||| |||||||||||||||||||||||    
T  54805804 caaggttttttctagattacctttgaagaatggtgggt 54805767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 3293197 - 3293161
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||| ||||||||||    
T  3293197 aaggttttttctaaattacctttgaaaaatggtgggt 3293161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 20352012 - 20351980
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||    
T  20352012 ttttttctaaattacctttgaagaatggtgggt 20351980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 29478357 - 29478393
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29478357 aaggttttttctagattacctttgaagaatggtgggt 29478393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 33289702 - 33289734
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||||||||||||||||||||||||    
T  33289702 ggttttttctaaattacctttgaagaatggtgg 33289734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 41632191 - 41632155
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41632191 aaggttttttctagattacctttgaagaatggtgggt 41632155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 41702644 - 41702608
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41702644 aaggttttttctagattacctttgaagaatggtgggt 41702608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 45633953 - 45633917
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| ||||||||||||||||||||||||||    
T  45633953 aaggttttttttaaattacctttgaagaatggtgggt 45633917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 47344653 - 47344689
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  47344653 aaggttttttctagattacctttgaagaatggtgggt 47344689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 51363004 - 51363040
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  51363004 aaggttttttctagattacctttgaagaatggtgggt 51363040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 53462001 - 53461965
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||| |||||||||||||||    
T  53462001 aaggttttttctaaattacctatgaagaatggtgggt 53461965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 14017558 - 14017523
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  14017558 aggttttttctagattacctttgaagaatggtgggt 14017523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 17555670 - 17555635
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  17555670 aggttttttctagattacctttgaagaatggtgggt 17555635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 23437590 - 23437625
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  23437590 aggttttttctagattacctttgaagaatggtgggt 23437625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 27838986 - 27839041
Alignment:
Q  161 agattgaactaattttgtaac-aaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||||||||||| ||||||||| |||| | ||||| |||||||||||    
T  27838986 agattgaactaattttgtaacaaaaaaatcccttttgtatagttgtatccaaacaa 27839041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 34835171 - 34835210
Alignment:
Q  211 aacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  34835171 aacaaggttttttctagattacctttgaaaaatggtgggt 34835210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 39077543 - 39077578
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  39077543 aggttttttctagattacctttgaagaatggtgggt 39077578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 189
Target Start/End: Complemental strand, 42882114 - 42882083
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatc 189  Q
    ||||||||||||||||||||||||||||||||    
T  42882114 aaaagattgaactaattttgtaacaaaaaatc 42882083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 49881247 - 49881212
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  49881247 aggttttttctagattacctttgaagaatggtgggt 49881212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 54216909 - 54216874
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||| ||||||||||    
T  54216909 aggttttttctaaattacctttgaaaaatggtgggt 54216874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 2243457 - 2243491
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  2243457 ggttttttctagattacctttgaagaatggtgggt 2243491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 9998103 - 9998069
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||| ||||||||||    
T  9998103 ggttttttctaaattacctttgaaaaatggtgggt 9998069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 29777440 - 29777406
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  29777440 ggttttttctagattacctttgaagaatggtgggt 29777406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 31070256 - 31070222
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  31070256 ggttttttctagattacctttgaagaatggtgggt 31070222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 31881486 - 31881452
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||| |||||||||||||||    
T  31881486 ggttttttctaaattacctatgaagaatggtgggt 31881452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 36533003 - 36532969
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||| |||||    
T  36533003 ggttttttctaaattacctttgaagaatgatgggt 36532969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 40956975 - 40956925
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatc 208  Q
    ||||||| ||| ||||||||||||||||||||  |||||| ||||||||||    
T  40956975 aaaagatggaagtaattttgtaacaaaaaatctattttatatagttatatc 40956925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 41949381 - 41949415
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  41949381 ggttttttctagattacctttgaagaatggtgggt 41949415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 43471878 - 43471844
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  43471878 ggttttttctagattacctttgaagaatggtgggt 43471844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 46708913 - 46708879
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||| ||||||||||||||||||||||||||||||    
T  46708913 ggttatttctaaattacctttgaagaatggtgggt 46708879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 48313556 - 48313590
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  48313556 ggttttttctagattacctttgaagaatggtgggt 48313590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 50457993 - 50457959
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  50457993 ggttttttctagattacctttgaagaatggtgggt 50457959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 52688348 - 52688382
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||| ||||||||||||||    
T  52688348 ggttttttctaaattaccttagaagaatggtgggt 52688382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 53854612 - 53854578
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  53854612 ggttttttctagattacctttgaagaatggtgggt 53854578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 55056442 - 55056408
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  55056442 ggttttttctagattacctttgaagaatggtgggt 55056408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 146611 - 146578
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  146611 gttttttctagattacctttgaagaatggtgggt 146578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 3170623 - 3170656
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtg 247  Q
    ||||||||||||| ||||||||||||||||||||    
T  3170623 aaggttttttctagattacctttgaagaatggtg 3170656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 6285307 - 6285340
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  6285307 gttttttctatattacctttgaagaatggtgggt 6285340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 7770217 - 7770278
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaaga-ttgaactaattttgtaacaaaaaat 188  Q
    ||||| ||||| |||||||||||||   |||||||| ||||||||||||| |||||||||||    
T  7770217 tttttttagagaaaagagaaaatatggattaaaagaattgaactaattttataacaaaaaat 7770278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 13222270 - 13222225
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaa 187  Q
    |||||||||||   | ||||||||||||||||||||||||||||||    
T  13222270 agagaaaatatggatcaaaagattgaactaattttgtaacaaaaaa 13222225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 18462195 - 18462162
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  18462195 gttttttctagattacctttgaagaatggtgggt 18462162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 21366795 - 21366758
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  21366795 caagggtttttctagattacctttgaagaatggtgggt 21366758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 24739044 - 24739097
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatccttttt 195  Q
    ||||| |||||  ||||||| |||||||||||||||||| ||||||||| ||||    
T  24739044 agagataatatggtttaaaaaattgaactaattttgtaataaaaaatccctttt 24739097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 47811906 - 47811939
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||| ||||||||||    
T  47811906 gttttttctaaattacctttgaaaaatggtgggt 47811939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 54715035 - 54715068
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||| ||||||||||    
T  54715035 gttttttctaaattacctttgaaaaatggtgggt 54715068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 2826866 - 2826830
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  2826866 aaggttttttctagattccctttgaagaatggtgggt 2826830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 5028964 - 5029052
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaa--aaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||| | |||||||||||  |||||  |||||||||||||||| |||||  ||||||| || ||| ||||| |||||||||||    
T  5028964 ttttttttagaggagagagaaaatatgatttaa--gattgaactaattttggaacaaataaaatcccttgtatatagttgtatccaaacaa 5029052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 6019929 - 6019961
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  6019929 ttttttctagattacctttgaagaatggtgggt 6019961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 22468951 - 22468919
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  22468951 ttttttctagattacctttgaagaatggtgggt 22468919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 22618693 - 22618661
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  22618693 ttttttctagattacctttgaagaatggtgggt 22618661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 22620590 - 22620626
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||| |||||||||||| |||||    
T  22620590 aaggttttttctaaattatctttgaagaatgatgggt 22620626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 26091443 - 26091407
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  26091443 aaggttttttctaaattatcttggaagaatggtgggt 26091407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 31532320 - 31532284
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  31532320 aaggttttttctagattacctttgaagaatgatgggt 31532284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 41560327 - 41560359
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||| ||||||||||||||||||||||||    
T  41560327 ggttttttttaaattacctttgaagaatggtgg 41560359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 42033172 - 42033208
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| || |||||||||||||||||||||||    
T  42033172 aaggttttttttagattacctttgaagaatggtgggt 42033208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 42085204 - 42085240
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  42085204 aaggttttttctagattacctttaaagaatggtgggt 42085240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 42222292 - 42222324
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  42222292 ttttttctagattacctttgaagaatggtgggt 42222324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 42557583 - 42557615
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  42557583 ttttttctagattacctttgaagaatggtgggt 42557615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 42766024 - 42765992
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||| |||||||||||||||||||||    
T  42766024 ggttttttctagattacctttgaagaatggtgg 42765992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 43890929 - 43890961
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||| ||||||||||    
T  43890929 ttttttctaaattacctttgaaaaatggtgggt 43890961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 44984758 - 44984794
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  44984758 aagggtttttctaaattacctttgaaaaatggtgggt 44984794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 49014095 - 49014131
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  49014095 aaggttttttttaaatcacctttgaagaatggtgggt 49014131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 43325903 - 43326034
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||||||||||||| ||||||| ||||||   ||||   |||||| ||||| | ||||||||||| |||||||||||| |||||||||||    
T  43325903 cttcaaatgagaaactgttaagagcagcttcttaaaaaa---taga---ttttttttagaggagagagaaaatatgttttaaaagattaaactaattttg 43325996  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| |||||| || || |||||||||||    
T  43325997 taacaaaaaatcccttttatataattgtatccaaacaa 43326034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 49243924 - 49243793
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||| ||| ||||||||||||||   ||||   |||||| ||||  | ||||||||||| ||||||||||||||||||||||||    
T  49243924 cttcaaatgagaagctgttaggagcagcttctcaaaaaa---taga---ttttttttagatgagagagaaaatatcttttaaaagattgaactaattttg 49243831  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| |||||| ||||| |||||||||||    
T  49243830 taacaaaaaatcccttttatatagttgtatccaaacaa 49243793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 17054368 - 17054241
Alignment:
Q  82 aaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaac 181  Q
    ||||||||| |||||||||| ||||||||||||||   ||   |||||||| ||||| | |||||||||||  |||||||||||||||||||||||||||    
T  17054368 aaatgagaagctgttaagagcagcttctcaaaaaa---ta---tattttttttagaggagagagaaaatattgtttaaaagattgaactaattttgtaac 17054275  T
Q  182 aaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| | |||||| ||||| |||| ||||||    
T  17054274 aaaaaattcattttatatagttgtatcgaaacaa 17054241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 24705509 - 24705397
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| || |||||||||||   || | ||||||||  |||| | ||||||||||||||||||||||||||||||||||||    
T  24705509 cttcaaatgagaagctgttaagagcagtttctcaaaaaa---taaa-tatttttt--agaggagagagaaaatatattttaaaagattgaactaattttg 24705416  T
Q  178 taacaaaaaatccttttta 196  Q
    ||||||||||||| |||||    
T  24705415 taacaaaaaatccctttta 24705397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 6844608 - 6844477
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||  ||||||||||||||   ||   |||||||| ||||| | |||||||||||  ||||||||||| |||||||||||    
T  6844608 cttcaaatgagaagctgttaagataagcttctcaaaaaa---ta---tattttttttagaggagagagaaaatattatttaaaagattaaactaattttg 6844515  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||  |||||| |||||  ||||||||||    
T  6844514 taacaaaaaatctcttttatatagttgcatccaaacaa 6844477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 47795005 - 47795131
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||||||||||        || ||||| ||||| | |||||||||||  |||||||| ||||||||||||||    
T  47795005 cttcaaatgagaagctgttaagagcagcttctcaaaaaa--------tagtttttttagaggagagagaaaatatgatttaaaagtttgaactaattttg 47795096  T
Q  178 taacaaaaaatcctttttatctagttatatccaaa 212  Q
    ||||||||||||| |||||| || || ||||||||    
T  47795097 taacaaaaaatccattttatatatttgtatccaaa 47795131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 42835010 - 42834931
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttat 205  Q
    ||||||| ||||| | ||||||||||||  ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  42835010 attttttttagaggagagagaaaatatagattaaaagattgaactaattttgtaacaaaaaatcccttttatatagttat 42834931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 43114877 - 43114759
Alignment:
Q  95 ttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaac-aaaaaatccttt 193  Q
    |||||||||| |||||||||||   |||| | |||||| ||||| |||||||||||||   | |||||||||||||||||||| ||| ||||||||  ||    
T  43114877 ttaagagtagattctcaaaaaa---tagatttttttttatagagaaaagagaaaatatgggtcaaaagattgaactaattttgcaacaaaaaaatctctt 43114781  T
Q  194 ttatctagttatatccaaacaa 215  Q
    |||| |||||||||||||||||    
T  43114780 ttatatagttatatccaaacaa 43114759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 47795424 - 47795511
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||  |||| ||||||    
T  47795424 tttttttagaggagagagaaaatataatttaaaagattgagctaattttgtaacaaaaaatcccttttatatagtcgtatcaaaacaa 47795511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 24686337 - 24686207
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| | ||||||||||||   ||||    |||||  |||| | |||||||||||   ||||||||||||||||||||||    
T  24686337 cttcaaatgagaagctgttaagagcaacttctcaaaaaa---taga----ttttttaagaggagagagaaaatatggattaaaagattgaactaattttg 24686245  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||  |||||| ||| | |||||||||||    
T  24686244 taacaaaaaatcgcttttatatagctgtatccaaacaa 24686207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 39842911 - 39842797
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| || || |||| ||||||||||||||   |||| | ||||||  |||| | |||||||||||  ||||||||||||||||||||||     
T  39842911 cttcaaatgagaagctattgagagcagcttctcaaaaaa---tagattttttttt--agaggagagagaaaatatgatttaaaagattgaactaattttc 39842817  T
Q  178 taacaaaaaatcctttttat 197  Q
    ||||||||||||| ||||||    
T  39842816 taacaaaaaatcccttttat 39842797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 215
Target Start/End: Complemental strand, 47796434 - 47796302
Alignment:
Q  79 ttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgt 178  Q
    |||||||||||| |||||||||| |||||||||||||| ||||   ||| |||| ||||  | |||||||||||  |||||||||| |||||||||||||    
T  47796434 ttcaaatgagaagctgttaagagcagcttctcaaaaaa-tata---tatattttttagacgagagagaaaatattctttaaaagatagaactaattttgt 47796339  T
Q  179 aacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    || |||||||   |||||| ||||| |||| ||||||    
T  47796338 aataaaaaatttcttttatatagttgtatctaaacaa 47796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 6318996 - 6318923
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||||    
T  6318996 agagaaaatatggattaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgcatccaaacaa 6318923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 11981856 - 11981727
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||| ||||||   ||||   |||||| ||||| | | | |||||||  |||||||||||||||||||||||    
T  11981856 cttcaaatgagaagctgttaagagcagcttctaaaaaaa---taga---ttttttttagagtagaaa-aaaatattgtttaaaagattgaactaattttg 11981764  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||||| |||||| ||||| |||||||||||    
T  11981763 taaca-aaaatcccttttatatagttgtatccaaacaa 11981727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 47796039 - 47795950
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| | |||||||||||| ||||||||||||| |||||||||||||||||||| | |||||| ||||  |||| ||||||    
T  47796039 attttttttagaggagagagaaaatataatttaaaagattgagctaattttgtaacaaaaaattccttttatatagtcgtatcaaaacaa 47795950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 215
Target Start/End: Original strand, 43114911 - 43115036
Alignment:
Q  84 atgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaa 183  Q
    ||||||| ||||| |||| ||||||||||||||   ||||   |||||| ||||| | ||||||||||||  || ||||||| |||||||||||||||||    
T  43114911 atgagaagctgttgagagcagcttctcaaaaaa---taga---ttttttttagaggagagagaaaatatagatttaaagattaaactaattttgtaacaa 43115004  T
Q  184 aaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||  |||||| ||| | |||||||||||    
T  43115005 aaaatcgattttatatagctgtatccaaacaa 43115036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 48738596 - 48738509
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | |||||||||||  |||||||||||||||||||||||||||||||||||  ||||||  |||| |||| ||||||    
T  48738596 tttttttagaggagagagaaaatattgtttaaaagattgaactaattttgtaacaaaaaatcacttttatacagttgtatctaaacaa 48738509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 33675067 - 33674998
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaa 211  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||  |||||| ||||| |||||||    
T  33675067 agagaaaatattgtttaaaagattgaattaattttgtaacaaaaaatctcttttatatagttgtatccaa 33674998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 47794817 - 47794870
Alignment:
Q  144 agaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttat 197  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  47794817 agaaaatatggtttaaaagattgaactaattttgtaacaaaaaatcccttttat 47794870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 6941503 - 6941401
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| ||||||| || ||||||||||||||   ||   |||||||| ||||| | ||| ||||||| ||||||||||||||| | ||||||    
T  6941503 cttcaaatgagaagctgttaaaagcagcttctcaaaaaa---ta---tattttttttagaggagagaaaaaatattttttaaaagattgaagttattttg 6941410  T
Q  178 taacaaaaa 186  Q
    |||||||||    
T  6941409 taacaaaaa 6941401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 11981259 - 11981163
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||||| ||||||||||||       | ||||||| ||||| | |||||||||| || |||||||||||||||| |||||    
T  11981259 cttcaaatgagaagctgttaagagtaacttctcaaaaaat------ggattttttttagaggagagagaaaataaatgttaaaagattgaactagttttg 11981166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 33241224 - 33241111
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||| |||| |||||||||| |||||||||||||    ||||   |||||| ||||| |  ||||||||||| ||||||| |||||||||| ||||    
T  33241224 cttcaaattagaagctgttaagagcagcttctcaaaaac---taga---ttttttttagaggagggagaaaatataatttaaaatattgaactaaatttg 33241131  T
Q  178 taacaaaaaatcctttttat 197  Q
    ||||||| ||||| ||||||    
T  33241130 taacaaagaatcccttttat 33241111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 40793098 - 40793031
Alignment:
Q  144 agaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaa 211  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||  | |||| ||||| |||||||    
T  40793098 agaaaatatgttttaaaagattgaactaattttgtaacgaaaaatctctcttatgtagttgtatccaa 40793031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 45296774 - 45296821
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatc 189  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  45296774 agagaaaatatagtttaaaagattgaactaattttgtaataaaaaatc 45296821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 8795322 - 8795428
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| | ||||| ||||||   |||| | ||||||  |||| | ||||||| || || |||||| |||||||||||||||    
T  8795322 cttcaaatgagaagctgttaagagcaacttctaaaaaaa---tagattttttttt--agaggagagagaaattaaatgttaaaatattgaactaattttg 8795416  T
Q  178 taacaaaaaatc 189  Q
    ||||||||||||    
T  8795417 taacaaaaaatc 8795428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 47793071 - 47793185
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatat-attttaaaagattgaactaatttt 176  Q
    |||||||||||||  ||||||||| ||||||||||||||   ||||   |||||| ||||| | ||||||||||| ||||||||| ||| ||||||||||    
T  47793071 cttcaaatgagaagttgttaagagcagcttctcaaaaaa---taga---ttttttttagaggagagagaaaatatgattttaaaa-attaaactaatttt 47793163  T
Q  177 gtaac-aaaaaatcctttttat 197  Q
    ||||| ||||||||| ||||||    
T  47793164 gtaacgaaaaaatcccttttat 47793185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 49480187 - 49480318
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||| ||||| ||||| |||| ||||||||||||||   ||   | |||||| ||||| | || ||||||||  ||| |||||||||||||||||||    
T  49480187 cttcaaacgagaagctgttgagagcagcttctcaaaaaa---ta---ttttttttttagaggagagcgaaaatatcattttaaagattgaactaattttg 49480280  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||| | |||||  ||||| |||| ||||||    
T  49480281 taacaaaaaattccttttacatagttgtatcaaaacaa 49480318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 3611133 - 3611169
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  3611133 aaggttttttctaaattacctttgaagaatggtgggt 3611169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 26472353 - 26472317
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  26472353 aaggttttttctaaattacctttgaagaatggtgggt 26472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 29770667 - 29770703
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  29770667 aaggttttttctaaattacctttgaagaatggtgggt 29770703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 42234837 - 42234873
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  42234837 aaggttttttctaaattacctttgaagaatggtgggt 42234873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 45378484 - 45378370
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaat-atattttaaaagattgaactaatttt 176  Q
    ||||||||||||| ||||| |||| ||||||||||||||   ||||   |||||| || ||  |||||||||| | || | |||||||||||||| ||||    
T  45378484 cttcaaatgagaagctgttcagagcagcttctcaaaaaa---taga---ttttttttaaagggaagagaaaattaaatgtcaaaagattgaactagtttt 45378391  T
Q  177 gtaacaaaaaatcctttttat 197  Q
    |||||||||||||| ||||||    
T  45378390 gtaacaaaaaatcccttttat 45378370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 51057068 - 51057104
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  51057068 aaggttttttctaaattacctttgaagaatggtgggt 51057104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 12016989 - 12016876
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||| | ||||||   ||||   |||||| ||||| | ||| |||||||   |||||||||||||||||||||     
T  12016989 cttcaaatgagaagctgttaagagaagcttataaaaaaa---taga---ttttttttagaggagagaaaaaatatggattaaaagattgaactaatttta 12016896  T
Q  178 taacaaaaaatcctttttat 197  Q
    ||||||||||| | ||||||    
T  12016895 taacaaaaaattccttttat 12016876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 25058682 - 25058721
Alignment:
Q  211 aacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  25058682 aacaaggttttttctagattacctttgaagaatggtgggt 25058721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 10066521 - 10066475
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaat 188  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||    
T  10066521 agagaaaatatattttaatagattaaactaattttgtgacaaaaaat 10066475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 21447445 - 21447483
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaa 116  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  21447445 cttcaaatgagaagctgttaagagtagcttctcaaaaaa 21447483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 41467804 - 41467770
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  41467804 ggttttttctaaattacctttgaagaatggtgggt 41467770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 215
Target Start/End: Complemental strand, 42429740 - 42429608
Alignment:
Q  79 ttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaat-atattttaaaagattgaactaattttg 177  Q
    |||||||||||| |||||||||| |||||||||||||   ||||| ||||||   ||||| | ||||||||| | || | ||||||||||| |  |||||    
T  42429740 ttcaaatgagaagctgttaagagcagcttctcaaaaa---atagattatttt---tagaggagagagaaaatcaaatatcaaaagattgaatttgttttg 42429647  T
Q  178 taac-aaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||| ||||||||| |||||| ||| | |||||||||||    
T  42429646 taacaaaaaaatcccttttatatagatgtatccaaacaa 42429608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 250
Target Start/End: Original strand, 44661965 - 44662003
Alignment:
Q  212 acaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  44661965 acaaggttttttctagattacctttgaagaatggtgggt 44662003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 52404117 - 52404219
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| || || |||| ||||||||||||||   ||    ||||||| ||||| | |||||||||||  |||||||| |||||||||||||     
T  52404117 cttcaaatgagaagctcttgagagcagcttctcaaaaaa---ta----attttttttagaggagagagaaaatatgatttaaaagtttgaactaatttta 52404209  T
Q  178 taacaaaaaa 187  Q
    ||||||||||    
T  52404210 taacaaaaaa 52404219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 6626195 - 6626162
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  6626195 gttttttctaaattacctttgaagaatggtgggt 6626162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 10928063 - 10928100
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  10928063 caaggttttttctaaattacctttgaaaaatggtgggt 10928100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 13281733 - 13281700
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  13281733 gttttttctaaattacctttgaagaatggtgggt 13281700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 23984751 - 23984788
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23984751 caaggttttttctagattacctttgaagaatggtgggt 23984788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 34752485 - 34752452
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  34752485 gttttttctaaattacctttgaagaatggtgggt 34752452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 2657300 - 2657336
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| ||||||||||||||||||||||||||    
T  2657300 aaggttttttttaaattacctttgaagaatggtgggt 2657336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 6327732 - 6327696
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  6327732 aaggttttttctagattacctttgaagaatggtgggt 6327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 10105981 - 10106033
Alignment:
Q  137 agcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatc 189  Q
    |||||||||||||||    ||||| ||||||||||||||||||||||||||||    
T  10105981 agcaaagagaaaatacggattaaatgattgaactaattttgtaacaaaaaatc 10106033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 24245210 - 24245174
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24245210 aaggttttttctagattacctttgaagaatggtgggt 24245174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 26277174 - 26277210
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26277174 aaggttttttctagattacctttgaagaatggtgggt 26277210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 27983772 - 27983736
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27983772 aaggttttttctagattacctttgaagaatggtgggt 27983736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 33073208 - 33073244
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33073208 aaggttttttctaaattacctttgaaaaatggtgggt 33073244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 38332044 - 38332008
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38332044 aaggttttttctagattacctttgaagaatggtgggt 38332008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 42834615 - 42834687
Alignment:
Q  144 agaaaatatattttaaaagattgaactaattttgtaac-aaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||  |||||||||||||||||||||||| || ||||||||| |||||| ||| | |||| ||||||    
T  42834615 agaaaatattgtttaaaagattgaactaattttgtcacaaaaaaatccattttatatagctgtatctaaacaa 42834687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 46616546 - 46616582
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  46616546 aaggttttttctagattacctttgaagaatggtgggt 46616582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 48373501 - 48373537
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  48373501 aaggttttttctagattacctttgaagaatggtgggt 48373537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 50774218 - 50774250
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||    
T  50774218 ttttttctaaattacctttgaagaatggtgggt 50774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 4243663 - 4243628
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||| ||||||||||    
T  4243663 aggttttttctaaattacctttgaataatggtgggt 4243628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 31307999 - 31308034
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  31307999 aggttttttctagattacctttgaagaatggtgggt 31308034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 219 - 250
Target Start/End: Original strand, 32448650 - 32448681
Alignment:
Q  219 tttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||    
T  32448650 tttttctaaattacctttgaagaatggtgggt 32448681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 33113001 - 33112966
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  33113001 aggttttttctagattacctttgaagaatggtgggt 33112966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 35692848 - 35692813
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  35692848 aggttttttctagattacctttgaagaatggtgggt 35692813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 249
Target Start/End: Complemental strand, 36030771 - 36030736
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtggg 249  Q
    ||||||||||||||||||||||| ||||||||||||    
T  36030771 aaggttttttctaaattacctttaaagaatggtggg 36030736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 45538151 - 45538186
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  45538151 aggttttttctagattacctttgaagaatggtgggt 45538186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 2557031 - 2556997
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||| |||||||||||||||||||||    
T  2557031 aaggttttttctagattacctttgaagaatggtgg 2556997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 4156248 - 4156214
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  4156248 ggttttttctagattacctttgaagaatggtgggt 4156214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 5980067 - 5980101
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  5980067 ggttttttctagattacctttgaagaatggtgggt 5980101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 5981169 - 5981203
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  5981169 ggttttttctagattacctttgaagaatggtgggt 5981203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 10338233 - 10338271
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaa 116  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  10338233 cttcaaatgagaagctgttaagagcagcttctcaaaaaa 10338271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 17995134 - 17995100
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  17995134 ggttttttctagattacctttgaagaatggtgggt 17995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 23221112 - 23221078
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  23221112 ggttttttctagattacctttgaagaatggtgggt 23221078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 23994845 - 23994879
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||| |||||||||||||||||||||    
T  23994845 aaggttttttctagattacctttgaagaatggtgg 23994879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 24885500 - 24885534
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  24885500 ggttttttctagattacctttgaagaatggtgggt 24885534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 31040708 - 31040742
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  31040708 ggttttttctagattacctttgaagaatggtgggt 31040742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 36003126 - 36003160
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtg 247  Q
    |||| ||||||||||||||||||||||||||||||    
T  36003126 caagtttttttctaaattacctttgaagaatggtg 36003160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 44544216 - 44544186
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||||||||||||||||||||||    
T  44544216 ttttttctaaattacctttgaagaatggtgg 44544186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 45808069 - 45807995
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaa-caaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||  |||||||| |||||||||||||||||  ||||||||  |||||| ||| | |||||||||||    
T  45808069 agagaaaatattgtttaaaaggttgaactaattttgtaataaaaaaatctcttttatataggtgtatccaaacaa 45807995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 46967224 - 46967190
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  46967224 ggttttttctagattacctttgaagaatggtgggt 46967190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 47671583 - 47671617
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||| |||||||||||||||||||||    
T  47671583 aaggttttttctagattacctttgaagaatggtgg 47671617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 49254158 - 49254124
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  49254158 ggttttttctagattacctttgaagaatggtgggt 49254124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 3285400 - 3285433
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||| |||||||||||||||||||||    
T  3285400 aggttttttctagattacctttgaagaatggtgg 3285433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 26272017 - 26271976
Alignment:
Q  146 aaaatatattttaaaagattgaactaattttgtaacaaaaaa 187  Q
    |||||||  |||||||||||||||||||||||||| ||||||    
T  26272017 aaaatatggtttaaaagattgaactaattttgtaataaaaaa 26271976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 26525071 - 26525038
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  26525071 gttttttctagattacctttgaagaatggtgggt 26525038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 26794302 - 26794335
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||| ||||||||||||||||||||||||    
T  26794302 aggttttttttaaattacctttgaagaatggtgg 26794335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 46428424 - 46428391
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||| ||||||||||    
T  46428424 gttttttctaaattacctttgaaaaatggtgggt 46428391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 47383914 - 47383881
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  47383914 gttttttctatattacctttgaagaatggtgggt 47383881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 51403189 - 51403156
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  51403189 gttttttctagattacctttgaagaatggtgggt 51403156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 4953053 - 4953085
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||| ||||||||||||||||||||||||||||    
T  4953053 ttttctctaaattacctttgaagaatggtgggt 4953085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 35273595 - 35273627
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||||||| ||||||||||||||||    
T  35273595 ggttttttctaaattatctttgaagaatggtgg 35273627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 46898277 - 46898193
Alignment:
Q  75 catcttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaa 159  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||| | ||||||||||||||||||    
T  46898277 catcttcaaatgagaagctgttaagagtagcttctcaaaaaaatatggagtattttttttagaggagagagaaaatatattttaa 46898193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 46898015 - 46897955
Alignment:
Q  155 tttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46898015 tttaaaagattgaactaattttgtaacaaaaaatcccttttatctagttatatccaaacaa 46897955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 215
Target Start/End: Original strand, 30121871 - 30121995
Alignment:
Q  85 tgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaa 184  Q
    |||||| |||||||||| ||||||||||||||   ||||   |||||| ||||| |  ||||||||||   |||||||||||||||||||||||||||||    
T  30121871 tgagaagctgttaagagcagcttctcaaaaaa---taga---ttttttttagaggagggagaaaatatggattaaaagattgaactaattttgtaacaaa 30121964  T
Q  185 aaatcctttttatctagttatatccaaacaa 215  Q
    |||| |||||||| ||||| |||||||||||    
T  30121965 aaattctttttatatagttgtatccaaacaa 30121995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 47222543 - 47222617
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatc-ctttttatctagttatatccaaacaa 215  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  47222543 agagaaaatatggtttaaaagattgaactaattttgtaacaaaaaatctctttttatatagttatatccaaacaa 47222617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 30121374 - 30121286
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||| | |||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||| ||| |||||||    
T  30121374 ttttttttagaggagagagaaaatataatttaaaagattgaactaattttgtaacaaaaaattccttttatatagttgtattcaaacaa 30121286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 35526626 - 35526492
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| ||||||| || ||||||||||||||   ||||   |||||| ||||| |  ||||||||||| ||||||||||| |||||||||||    
T  35526626 cttcaaatgagaagctgttaaaagcagcttctcaaaaaa---taga---ttttttttagaggagcgagaaaatataatttaaaagattaaactaattttg 35526533  T
Q  178 taacaa---aaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||   ||||||| |||||| ||||| |||||||||||    
T  35526532 taacaaaaaaaaatcccttttatatagttgtatccaaacaa 35526492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 40261994 - 40261924
Alignment:
Q  145 gaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||    
T  40261994 gaaaatatgttttaaaatattgaactaattttgtaacaaaaaaccctttttatatagttgtatccaaacaa 40261924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 5800989 - 5801122
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||     |||||| ||||| | ||  |||||| | ||||||| |||||||||||||||    
T  5800989 cttcaaatgagaagctgttaagagtagcttctcaaaaaa-tata----tttttttttagaggagaggaaaaatacaatttaaaatattgaactaattttg 5801083  T
Q  178 taac-aaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||| ||||||||  |||||| ||||| |||||||||||    
T  5801084 taacaaaaaaatctcttttatatagttgtatccaaacaa 5801122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 14312450 - 14312537
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | |||||||||| | |||||||||||||||| || ||||||||||||||||||||||| ||||| |||| ||||||    
T  14312450 tttttttagaggagagagaaaatagagtttaaaagattgaacttatattgtaacaaaaaatcctttttatatagttgtatctaaacaa 14312537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 38320030 - 38319959
Alignment:
Q  144 agaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||  |||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||    
T  38320030 agaaaatatggtttaaaagattgaactaattttgtaacaaaaaatctcttttatatagttgtatccaaacaa 38319959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 26246573 - 26246705
Alignment:
Q  78 cttcaaatgagaaac-tgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaatttt 176  Q
    ||||||||||||| | ||||||||| ||||||||||||||   ||||   |||||| ||||| | ||||||||||   ||||||||||| ||||||||||    
T  26246573 cttcaaatgagaagcctgttaagagaagcttctcaaaaaa---taga---ttttttttagaggagagagaaaatagggtttaaaagattaaactaatttt 26246666  T
Q  177 gtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||  ||||||  |||| |||||||||||    
T  26246667 gtaacaaaaaatctcttttataaagttgtatccaaacaa 26246705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 35223890 - 35223801
Alignment:
Q  125 tattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||| ||||| | |||||||||||| || |||| ||||||||||||| || ||||||||||| |||||| |||||||||||||||||    
T  35223890 tattttttttagaggagagagaaaatatagttcaaaa-attgaactaatttggtgacaaaaaatccattttatatagttatatccaaacaa 35223801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 21696559 - 21696487
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||  || ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  21696559 agagaaaatatgattcaaaagattgaactaattttgtaacaaaaaatcc-ttttatatagttgtatccaaacaa 21696487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 24162116 - 24162252
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| |||||||||||||| || |   | |||||| || || | |||||||  ||  |||||||||||||||||||||||    
T  24162116 cttcaaatgagaagctgttaagagcagcttctcaaaaaa-tagatttttttttttttaaaggagagagaaacaattgtttaaaagattgaactaattttg 24162214  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||  |||||| ||| |  ||||||||||    
T  24162215 taacaaaaaatctcttttatatagatgcatccaaacaa 24162252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 24688776 - 24688853
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagtt 203  Q
    ||||||| ||||| | |||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  24688776 attttttttagaggagagagaaaatatggtttaaaagattgaactaatttggtaacaaaaaatcatttttatatagtt 24688853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 210
Target Start/End: Complemental strand, 26970867 - 26970742
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||| ||| || ||||||||||| ||||      ||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  26970867 cttcaaatgagaagctgttaggagcagattctcaaaaaa-tata------tttttttagaggagagagaaaatattgtttaaaagattgaactaattttg 26970775  T
Q  178 taacaaaaaatcctttttatctagttatatcca 210  Q
    ||||||||| ||| |||||| || || ||||||    
T  26970774 taacaaaaagtcccttttatataattgtatcca 26970742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 26970406 - 26970493
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | ||| |||||||  ||||||| ||||||||||||||||||||||||||| |||| || ||||| |||||||||||    
T  26970406 tttttttagaggagagataaaatatgatttaaaacattgaactaattttgtaacaaaaaatcattttcatatagttgtatccaaacaa 26970493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 10283290 - 10283378
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||| | |||| ||||||  |||||| ||||||||||||||||||||||||||||| |||||| ||| | |||| ||||||    
T  10283290 ttttttttagaggagagaggaaatatggtttaaacgattgaactaattttgtaacaaaaaatcccttttatatagctgtatcgaaacaa 10283378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 24689428 - 24689354
Alignment:
Q  143 gagaaaatatattttaaaagattgaactaattttgtaacaa--aaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||  |||||||||||||||||||||||||||||  ||||||  |||||| ||||| |||||||||||    
T  24689428 gagaaaatattatttaaaagattgaactaattttgtaacaaaaaaaatctcttttatatagttgtatccaaacaa 24689354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 23640761 - 23640830
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaa 211  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||  ||||||  |||| |||||||    
T  23640761 agagaaaatatagattaaaagattgaactaattttgtaaaaaaaaatctcttttatagagttgtatccaa 23640830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 26175462 - 26175519
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||| |||||||||||||||||||||| | |||||| |||||| ||||||||||    
T  26175462 aaaagatttaactaattttgtaacaaaaaattcattttatatagttacatccaaacaa 26175519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 32556785 - 32556744
Alignment:
Q  209 caaacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  32556785 caaactaggttttttctaaattacctttgaagaatggtgggt 32556744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 33857986 - 33858071
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaa 212  Q
    |||||| ||||||| ||| |||||||  || |||||||| |||||||||| ||||||||||||  |||||| ||||| ||||||||    
T  33857986 ttttttttagagcagagataaaatatgattcaaaagattaaactaattttttaacaaaaaatctcttttatatagttgtatccaaa 33858071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 25894102 - 25894066
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  25894102 aaggttttttctaaattacctttgaagaatggtgggt 25894066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 46817595 - 46817559
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  46817595 aaggttttttctaaattacctttgaagaatggtgggt 46817559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 21696741 - 21696863
Alignment:
Q  79 ttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgt 178  Q
    ||||||||| || || ||||||| |||||||||||||| ||||       |||| | ||| |||| ||||||||  ||||||||||||  ||||||||||    
T  21696741 ttcaaatgaaaagctattaagagcagcttctcaaaaaaatata-------tttttttgaggaaagggaaaatatggtttaaaagattgttctaattttgt 21696833  T
Q  179 aacaaaaaatcctttttatctagttatatc 208  Q
    |||||||||||  |||||| ||||| ||||    
T  21696834 aacaaaaaatctcttttatatagttgtatc 21696863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 23808924 - 23809007
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaa 211  Q
    ||||| ||||| |||||||||||||  ||||||| ||  || |||||||||||| |||||||| |||||| ||||| |||||||    
T  23808924 tttttttagaggaaagagaaaatatggtttaaaaaatctaattaattttgtaacgaaaaatcccttttatatagttgtatccaa 23809007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 24228540 - 24228575
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  24228540 aggttttttctaaattacctttgaagaatggtgggt 24228575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 36817018 - 36816983
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  36817018 aggttttttctaaattacctttgaagaatggtgggt 36816983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 10282006 - 10282044
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaa 116  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  10282006 cttcaaatgagaagctgttaagagtagcttctcaaaaaa 10282044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 11486512 - 11486412
Alignment:
Q  83 aatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaaca 182  Q
    |||||||| |||||| ||||||||||| ||||||   ||||   |||||| ||||| | ||||||||||   ||||||| |||||||||||||||||| |    
T  11486512 aatgagaagctgttatgagtagcttctaaaaaaa---taga---ttttttttagaggagagagaaaataccatttaaaaaattgaactaattttgtaaaa 11486419  T
Q  183 aaaaatc 189  Q
    |||||||    
T  11486418 aaaaatc 11486412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 24923196 - 24923162
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  24923196 ggttttttctaaattacctttgaagaatggtgggt 24923162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 26579900 - 26579866
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  26579900 ggttttttctaaattacctttgaagaatggtgggt 26579866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 29610635 - 29610669
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  29610635 ggttttttctaaattacctttgaagaatggtgggt 29610669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 35752206 - 35752172
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  35752206 ggttttttctaaattacctttgaagaatggtgggt 35752172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 39323616 - 39323650
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  39323616 ggttttttctaaattacctttgaagaatggtgggt 39323650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 47906931 - 47906897
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  47906931 ggttttttctaaattacctttgaagaatggtgggt 47906897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 48085858 - 48085892
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  48085858 ggttttttctaaattacctttgaagaatggtgggt 48085892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 25037682 - 25037649
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtg 247  Q
    ||||||||||||||||||||||||||||||||||    
T  25037682 aaggttttttctaaattacctttgaagaatggtg 25037649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 44659843 - 44659876
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||||||||||||||||||||||||    
T  44659843 aggttttttctaaattacctttgaagaatggtgg 44659876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 4594478 - 4594522
Alignment:
Q  144 agaaaatatattttaaaagattgaactaattttgtaacaaaaaat 188  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||    
T  4594478 agaaaatatggtttaaaagattgaactaatttagtaacaaaaaat 4594522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 5712166 - 5712202
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5712166 aaggttttttctaaattacctttgaagaatagtgggt 5712202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 22979832 - 22979796
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22979832 aaggttttttctagattacctttgaagaatggtgggt 22979796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 33332787 - 33332823
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  33332787 aaggttttttctagattacctttgaagaatggtgggt 33332823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 35484634 - 35484670
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||| ||||||||||||||||||    
T  35484634 aaggttttttctaaattatctttgaagaatggtgggt 35484670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 35526012 - 35525952
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaa 186  Q
    ||||||||||||  |  |||||||||   ||||||||||||||||||||||||||||||||    
T  35526012 attttttgtagaaaagggagaaaatagtgtttaaaagattgaactaattttgtaacaaaaa 35525952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 39866667 - 39866699
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||    
T  39866667 ttttttctaaattacctttgaagaatggtgggt 39866699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 44003544 - 44003508
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||| ||||||||||    
T  44003544 aaggttttttctaaattacctttgaaaaatggtgggt 44003508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 45063540 - 45063504
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  45063540 aaggttttttctagattacctttgaagaatggtgggt 45063504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 46913107 - 46913143
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  46913107 aaggttttttctagattacctttgaagaatggtgggt 46913143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 47740516 - 47740480
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  47740516 aaggttttttctagattacctttgaagaatggtgggt 47740480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 48609862 - 48609826
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  48609862 aaggttttttctagattacctttgaagaatggtgggt 48609826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 7876501 - 7876466
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||| ||||||||||||||||||||||||||||||    
T  7876501 aggttgtttctaaattacctttgaagaatggtgggt 7876466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 33839899 - 33839864
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  33839899 aggttttttctagattacctttgaagaatggtgggt 33839864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 35823289 - 35823324
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35823289 aggttttttctaaattaccttagaagaatggtgggt 35823324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 45482657 - 45482692
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  45482657 aggttttttctagattacctttgaagaatggtgggt 45482692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 46898189 - 46898154
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||| ||||||||||    
T  46898189 aggttttttctaaattacctttgaaaaatggtgggt 46898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 498360 - 498326
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||| ||||||||||||||||||||||||||    
T  498360 ggttttttataaattacctttgaagaatggtgggt 498326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 10028488 - 10028522
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  10028488 ggttttttctagattacctttgaagaatggtgggt 10028522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 19563445 - 19563479
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||| |||||||||||||||||||||    
T  19563445 aaggttttttctagattacctttgaagaatggtgg 19563479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 26151189 - 26151243
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaa 212  Q
    |||||||||||||||||| |||||||||||||  |||||| ||| | ||||||||    
T  26151189 aaaagattgaactaatttagtaacaaaaaatctcttttatatagatgtatccaaa 26151243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 26941704 - 26941670
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||| ||||||||||||||||||||||||||    
T  26941704 ggttttttataaattacctttgaagaatggtgggt 26941670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 29854778 - 29854704
Alignment:
Q  129 ttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagtt 203  Q
    |||| ||||| | |||||||||||  || |||| ||||||||||||||||||| |||||||  |||||| |||||    
T  29854778 ttttttagaggagagagaaaatatggttcaaaatattgaactaattttgtaacgaaaaatctcttttatatagtt 29854704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 33696006 - 33695972
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||| |||||||||||||||||||||    
T  33696006 aaggttttttctagattacctttgaagaatggtgg 33695972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 35328252 - 35328218
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||| |||||||||||||||    
T  35328252 ggttttttctaaattacctatgaagaatggtgggt 35328218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 35767481 - 35767515
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  35767481 ggttttttctagattacctttgaagaatggtgggt 35767515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 39453647 - 39453613
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||| |||||||||||||||||    
T  39453647 ggttttttctaaattacttttgaagaatggtgggt 39453613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 42272149 - 42272183
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||| |||||||||||||||||||||    
T  42272149 aaggttttttctagattacctttgaagaatggtgg 42272183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 43489218 - 43489252
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||| ||||||||||    
T  43489218 ggttttttctaaattacctttgaataatggtgggt 43489252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 10282501 - 10282558
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||| |||||||||||||||| ||||||||| | |||||| ||||  |||||||||||    
T  10282501 aaaatattgaactaattttgttacaaaaaataccttttatatagtagtatccaaacaa 10282558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 27018115 - 27018148
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||| |||||||||||||||||||||    
T  27018115 aggttttttctagattacctttgaagaatggtgg 27018148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 29098752 - 29098785
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||| |||||||||||||||||    
T  29098752 gttttttctaaattacatttgaagaatggtgggt 29098785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 37986005 - 37986062
Alignment:
Q  159 aaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaag 216  Q
    |||||||||||||| ||| || |||||||||| |||||| ||||| ||||| ||||||    
T  37986005 aaagattgaactaaatttttatcaaaaaatcccttttatatagttgtatccgaacaag 37986062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 1644605 - 1644573
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcc 190  Q
    |||| ||||||||||||||||||||||||||||    
T  1644605 aaaatattgaactaattttgtaacaaaaaatcc 1644573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 2341847 - 2341811
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| || |||||||||||||||||||||||    
T  2341847 aaggttttttttagattacctttgaagaatggtgggt 2341811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 11750126 - 11750058
Alignment:
Q  144 agaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaa 212  Q
    |||||||| || | ||||||||||| ||||||||||| ||||||  | |||||| ||||| ||||||||    
T  11750126 agaaaataaatgtcaaaagattgaagtaattttgtaataaaaaaatcattttatatagttgtatccaaa 11750058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 20165995 - 20165963
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  20165995 ttttttctagattacctttgaagaatggtgggt 20165963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 24689146 - 24689174
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaa 186  Q
    |||||||||||||||||||||||||||||    
T  24689146 aaaagattgaactaattttgtaacaaaaa 24689174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 31586848 - 31586880
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||| |||||||||||||||||||||    
T  31586848 ggttttttctagattacctttgaagaatggtgg 31586880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 37127939 - 37127971
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||| ||||||||||||||||||||||||||    
T  37127939 ttttttttaaattacctttgaagaatggtgggt 37127971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 40670563 - 40670595
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||| |||||||||||||||||||||    
T  40670563 ggttttttctagattacctttgaagaatggtgg 40670595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 45447567 - 45447657
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgt---aacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| || ||||||||||  ||| ||| ||||||||||||||||   || ||||||||  |||||| ||||| |||||||||||    
T  45447567 tttttttagaggaaggagaaaatatggttttaaaaattgaactaattttgtaaaaaaaaaaaatctcttttatttagttgtatccaaacaa 45447657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 45690282 - 45690246
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  45690282 aagggtttttctaaattacctttgaaaaatggtgggt 45690246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 49171543 - 49171511
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  49171543 ttttttctagattacctttgaagaatggtgggt 49171511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 42676613 - 42676481
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||| ||||| ||||||||||||||   |||| | ||||||  |||| | |||||||||||  |||||||||||||||||||||||    
T  42676613 cttcaaatgagaagctgtcaagagcagcttctcaaaaaa---tagattttttttt--agaggatagagaaaatatgatttaaaagattgaactaattttg 42676519  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| |||||| ||||| ||| |||||||    
T  42676518 taacaaaaaatcccttttatatagttgtatgcaaacaa 42676481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 30668991 - 30668860
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| || ||||||| | ||||||||||||   ||   |||||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  30668991 cttcaaatgagaagctattaagagcaacttctcaaaaaa---ta---tattttttttagaggagagagaaaatatgatttaaaagattgaactaattttg 30668898  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||| | ||||| || || |||||||||||    
T  30668897 taacaaaaaatcatgtttatataattgtatccaaacaa 30668860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 21479552 - 21479422
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||  ||||||||||||||   ||||   |||||| ||||| | ||||||  |||||||||||| |||||||||||||||    
T  21479552 cttcaaatgagaagctgttaagaccagcttctcaaaaaa---taga---ttttttttagaggagagagaa--tatattttaaaaaattgaactaattttg 21479461  T
Q  178 taac-aaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||| ||||||||| |||||| ||||| |||||||||||    
T  21479460 taacgaaaaaatcccttttatatagttgtatccaaacaa 21479422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 39844156 - 39844289
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||| ||| ||| |||||| ||||||||||||||   |||  | |||||| ||||| | |||||||||||  ||||| |||||||||||||||||    
T  39844156 cttcaaatgtgaagctggtaagagcagcttctcaaaaaa---tagtttttttttt-tagaggagagagaaaatattgtttaatagattgaactaattttg 39844251  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||||| |||||| ||||| |||||||||||    
T  39844252 taacagaaaatcccttttatatagttgtatccaaacaa 39844289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 40662740 - 40662827
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | |||||||||||  ||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  40662740 tttttttagaggagagagaaaatatgatttaaaaaattgaactaattttgtaacaaaaaatcccttttatatagttgtatccaaacaa 40662827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 14787344 - 14787217
Alignment:
Q  82 aaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaac 181  Q
    ||||||||| |||||||||| | ||||||||||||   ||||   |||||| ||||| | |||||||||||  |||||||||||||| ||||||||||||    
T  14787344 aaatgagaagctgttaagagcaacttctcaaaaaa---taga---ttttttttagaggagagagaaaatattgtttaaaagattgaattaattttgtaac 14787251  T
Q  182 aaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||  |||||  ||||| |||||||||||    
T  14787250 aaaaaatctcttttagatagttgtatccaaacaa 14787217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 30666408 - 30666277
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| ||||||| || ||||||||||||||   ||   |||||||| ||||  | |||||||||||  ||||||||||||||| |||||||    
T  30666408 cttcaaatgagaagctgttaaaagcagcttctcaaaaaa---ta---tattttttttagatgagagagaaaatatgatttaaaagattgaacaaattttg 30666315  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| |||||| || || ||| |||||||    
T  30666314 taacaaaaaatcccttttatatatttgtattcaaacaa 30666277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 43968563 - 43968632
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaa 211  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  43968563 agagaaaatatgatttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgtatccaa 43968632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 30620699 - 30620569
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||  ||||||||| | |||||||||||| ||||      ||||| ||||| | |||||||||||  | |||||||||||||||||||||    
T  30620699 cttcaaatgagaagttgttaagagcaacttctcaaaaaa-tata------tttttttagaggagagagaaaatatgatataaaagattgaactaattttg 30620607  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||| ||||||| ||||||| ||||| |||| ||||||    
T  30620606 taaccaaaaatcatttttatatagttgtatcgaaacaa 30620569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 30623320 - 30623190
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||  ||||||||| | |||||||||||| ||||      ||||| ||||| | |||||||||||  | |||||||||||||||||||||    
T  30623320 cttcaaatgagaagttgttaagagcaacttctcaaaaaa-tata------tttttttagaggagagagaaaatatgatataaaagattgaactaattttg 30623228  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||| ||||||| ||||||| ||||| |||| ||||||    
T  30623227 taaccaaaaatcatttttatatagttgtatcgaaacaa 30623190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 15459051 - 15458962
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| |||||||||||||  ||| ||  |||||||||||||||||||||||||||  |||||| ||||| |||||||||||    
T  15459051 attttttttagaggaaagagaaaatatggttttaagtattgaactaattttgtaacaaaaaatcacttttatatagttgtatccaaacaa 15458962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 30632292 - 30632219
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||  |||||| ||||| |||||||||||    
T  30632292 agagaaaatatgatttaaaagattgaattaattttgtaacaaaaaatctcttttatatagttgtatccaaacaa 30632219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 7495660 - 7495600
Alignment:
Q  155 tttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||    
T  7495660 tttaaaagattgaacaaattttgtaacaaaaaatcccttttatatagttgtatccaaacaa 7495600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 43004994 - 43004941
Alignment:
Q  135 agagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaat 188  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  43004994 agaggaaagagaaaatatgatttaaaagattgaactaattttgtaacaaaaaat 43004941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 20612836 - 20612717
Alignment:
Q  82 aaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaac 181  Q
    ||||||||| |||||||||| ||||||||||||||   ||||    ||||| || || | ||| |||||||  ||||||||||| ||||||||||| |||    
T  20612836 aaatgagaatctgttaagagcagcttctcaaaaaa---taga----tttttttaaaggagagaaaaaatatggtttaaaagattaaactaattttgaaac 20612744  T
Q  182 aaaaaatcctttttatctagttatatc 208  Q
    ||||||||| |||||| ||||| ||||    
T  20612743 aaaaaatcccttttatatagttgtatc 20612717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 43968226 - 43968285
Alignment:
Q  156 ttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||||||||||||||||||||||||  |||||| | ||| |||||||||||    
T  43968226 ttaaaagattgaactaattttgtaacaaaaaatctcttttatatcgttgtatccaaacaa 43968285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 2000516 - 2000475
Alignment:
Q  209 caaacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  2000516 caaataaggttttttctaaattacctttgaagaatggtgggt 2000475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 3256251 - 3256148
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||| ||||||   ||||   |||||| || || | |||||||||||  ||||||||||||||| ||||||     
T  3256251 cttcaaatgagaagctgttaagagcagcttcttaaaaaa---taga---ttttttttataggagagagaaaatatgatttaaaagattgaaccaattttt 3256158  T
Q  178 taacaaaaaa 187  Q
    ||||||||||    
T  3256157 taacaaaaaa 3256148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 12333670 - 12333633
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12333670 caaggttttttctaaattacctttgaagaatggtgggt 12333633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 36950336 - 36950405
Alignment:
Q  146 aaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||  ||||||| ||| |||||||||||||||||||||||| |||||| |||||  ||||||||||    
T  36950336 aaaatattgtttaaaaaattaaactaattttgtaacaaaaaatccattttatatagttgaatccaaacaa 36950405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 2688903 - 2688867
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  2688903 aaggttttttctaaattacctttgaagaatggtgggt 2688867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 27400395 - 27400435
Alignment:
Q  210 aaacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27400395 aaacaaggttttttctagattacctttgaagaatggtgggt 27400435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 7074897 - 7074968
Alignment:
Q  144 agaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||  ||||||| ||| ||||||||||||| ||||||||| ||||||| ||||| ||||| |||||    
T  7074897 agaaaatatgatttaaaaaatttaactaattttgtatcaaaaaatcatttttatatagttgtatcctaacaa 7074968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 1826862 - 1826772
Alignment:
Q  125 tattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||| ||||| | |||||||||||   || |||||||||||||||||||||| ||||||||  |||||| ||| |  ||||||||||    
T  1826862 tattttttttagaggagagagaaaatatgaatttaaagattgaactaattttgtaataaaaaatcgcttttatatagctggatccaaacaa 1826772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 9420347 - 9420273
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaa-aaaatcctttttatctagttatatccaaacaa 215  Q
    |||| ||||||  ||||||| ||| ||||||||||||||||| ||||||| |||||| ||||| |||||||||||    
T  9420347 agaggaaatatggtttaaaatattaaactaattttgtaacaaaaaaatccattttatatagttgtatccaaacaa 9420273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 21479275 - 21479225
Alignment:
Q  165 tgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||||||||||| | |||||| ||||| |||||||||||    
T  21479275 tgaactaattttgtaacaaaaaatgccttttatgtagttgtatccaaacaa 21479225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 28641464 - 28641430
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  28641464 ggttttttctaaattacctttgaagaatggtgggt 28641430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 40544250 - 40544216
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||||||||||||||||||||||||||    
T  40544250 aaggttttttctaaattacctttgaagaatggtgg 40544216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 40635216 - 40635250
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  40635216 ggttttttctaaattacctttgaagaatggtgggt 40635250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 43356097 - 43356131
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  43356097 ggttttttctaaattacctttgaagaatggtgggt 43356131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 145281 - 145314
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  145281 gttttttctaaattacctttgaagaatggtgggt 145314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 3197064 - 3197007
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||    
T  3197064 aaaagattgaactaattttgtaacaaaaaatcacttttatatagctgtatcaaaacaa 3197007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 35158225 - 35158188
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||| |||||||||||||||||||||||||||||||||    
T  35158225 caagattttttctaaattacctttgaagaatggtgggt 35158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 6594643 - 6594607
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  6594643 aaggttttttctagattacctttgaagaatggtgggt 6594607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 12814610 - 12814646
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  12814610 aaggttttttctagattacctttgaagaatggtgggt 12814646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 26710341 - 26710377
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26710341 aaggttttttctagattacctttgaagaatggtgggt 26710377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 27331298 - 27331330
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||    
T  27331298 ttttttctaaattacctttgaagaatggtgggt 27331330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 32608376 - 32608412
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  32608376 aaggttttttctagattacctttgaagaatggtgggt 32608412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 39103043 - 39103079
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||| ||||||||||    
T  39103043 aaggttttttctaaattacctttgaaaaatggtgggt 39103079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 39301367 - 39301335
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||    
T  39301367 ttttttctaaattacctttgaagaatggtgggt 39301335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 40735460 - 40735496
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40735460 aaggttttttctagattacctttgaagaatggtgggt 40735496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 10424592 - 10424627
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  10424592 aggttttttctagattacctttgaagaatggtgggt 10424627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 13815402 - 13815367
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  13815402 aggttttttctagattacctttgaagaatggtgggt 13815367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 21735073 - 21735038
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||| ||||||||||    
T  21735073 aggttttttctaaattacctttgaaaaatggtgggt 21735038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 27765035 - 27765000
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||| |||||||||||||||||    
T  27765035 aggttttttctaaattacatttgaagaatggtgggt 27765000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 28020005 - 28019970
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  28020005 aggttttttctagattacctttgaagaatggtgggt 28019970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 45655020 - 45654973
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatc 189  Q
    |||||||||| | || |||| |||||||||||||||||||||||||||    
T  45655020 agagaaaatacaattcaaaaaattgaactaattttgtaacaaaaaatc 45654973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 746464 - 746498
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  746464 ggttttttctagattacctttgaagaatggtgggt 746498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 2325072 - 2325038
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  2325072 ggttttttctagattacctttgaagaatggtgggt 2325038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 4034590 - 4034624
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  4034590 ggttttttctagattacctttgaagaatggtgggt 4034624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 4258488 - 4258522
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||| ||||||||||||||||||    
T  4258488 ggttttttctaaattatctttgaagaatggtgggt 4258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 8056625 - 8056655
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtg 247  Q
    |||||||||||||||||||||||||||||||    
T  8056625 gttttttctaaattacctttgaagaatggtg 8056655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 12730059 - 12730093
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||| |||||    
T  12730059 ggttttttctaaattacctttgaagaatgatgggt 12730093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 27024413 - 27024447
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  27024413 ggttttttctagattacctttgaagaatggtgggt 27024447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 27651217 - 27651183
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  27651217 ggttttttctagattacctttgaagaatggtgggt 27651183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 28566872 - 28566838
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||||||||| |||||||||||||||    
T  28566872 aaggttttttctaaattacttttgaagaatggtgg 28566838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 29687039 - 29687073
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||| ||||||||||||||||||    
T  29687039 ggttttttctaaattatctttgaagaatggtgggt 29687073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 7892870 - 7892837
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  7892870 gttttttctagattacctttgaagaatggtgggt 7892837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 23901774 - 23901811
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  23901774 caagggtttttctagattacctttgaagaatggtgggt 23901811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 38997100 - 38997133
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  38997100 gttttttctagattacctttgaagaatggtgggt 38997133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 3266296 - 3266328
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||| |||||||||||||||||    
T  3266296 ttttttctaaattacatttgaagaatggtgggt 3266328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 15925076 - 15925112
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  15925076 aaggttttttctagattacctttcaagaatggtgggt 15925112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 17600832 - 17600868
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  17600832 aaggttttttctagattacctttgaaaaatggtgggt 17600868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 31667608 - 31667564
Alignment:
Q  143 gagaaaatatattttaaaagattgaactaattttgtaacaaaaaa 187  Q
    ||||||||||  |||||||||||||||||||| ||||| ||||||    
T  31667608 gagaaaatatggtttaaaagattgaactaattctgtaaaaaaaaa 31667564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 32327361 - 32327393
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  32327361 ttttttctagattacctttgaagaatggtgggt 32327393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 43899142 - 43899110
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||||||||||||||| ||||||||    
T  43899142 ggttttttctaaattacctttgaaaaatggtgg 43899110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 45370988 - 45371020
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||| |||||||||||||||||||||    
T  45370988 ggttttttctagattacctttgaagaatggtgg 45371020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 215
Target Start/End: Complemental strand, 1030528 - 1030396
Alignment:
Q  79 ttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgt 178  Q
    |||||||||||| |||||||||| ||||||||||||||   |||| | |||||| ||||| | ||||||||||    |||||||||||||||||||||||    
T  1030528 ttcaaatgagaagctgttaagagcagcttctcaaaaaa---tagattttttttt-tagaggagagagaaaataagagttaaaagattgaactaattttgt 1030433  T
Q  179 aacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||  |||||| ||||| |||||||||||    
T  1030432 aacaaaaaatcacttttatatagttgtatccaaacaa 1030396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 35308082 - 35308215
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    |||||||||||||  ||||||||| ||||||||||||||   ||||   |||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  35308082 cttcaaatgagaagttgttaagagcagcttctcaaaaaa---taga---ttttttttagaggagagagaaaatatgatttaaaagattgaactaattttg 35308175  T
Q  178 taac--aaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||  ||||||||| |||||| ||||| |||||||||||    
T  35308176 taacaaaaaaaatcccttttatatagttgtatccaaacaa 35308215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 13916617 - 13916548
Alignment:
Q  146 aaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  13916617 aaaatatgttttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgtatccaaacaa 13916548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 5765311 - 5765448
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||||| ||||   |||  | |||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  5765311 cttcaaatgagaagctgttaagagcagcttctcagaaaa---tagttttttttttttagaggagagagaaaatattttttaaaagattgaactaattttg 5765407  T
Q  178 taac---aaaaaatcctttttatctagttatatccaaacaa 215  Q
     |||   ||||||||| |||||| ||||| |||| ||||||    
T  5765408 caacaaaaaaaaatccattttatatagttttatctaaacaa 5765448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 6007775 - 6007687
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||| | |||||||||||  ||||||||||||||||||||||| |||||||||||| |||||| ||||| ||| |||||||    
T  6007775 ttttttttagaggagagagaaaatatgatttaaaagattgaactaattttgcaacaaaaaatcccttttatatagttgtattcaaacaa 6007687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 27964058 - 27963970
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||| | |||||||||||| |||||||| |||||||||||||||||||||||||   |||||| ||||| |||||||||||    
T  27964058 ttttttttagaggagagagaaaatataatttaaaaggttgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaa 27963970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 27881401 - 27881328
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||   |||||| ||||| |||||||||||    
T  27881401 agagaaaatataatttaaaaggttgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaa 27881328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 27917624 - 27917551
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||   |||||| ||||| |||||||||||    
T  27917624 agagaaaatataatttaaaaggttgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaa 27917551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 28021582 - 28021509
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||   |||||| ||||| |||||||||||    
T  28021582 agagaaaatataatttaaaaggttgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaa 28021509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 40737514 - 40737441
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||   |||||| ||||| |||||||||||    
T  40737514 agagaaaatattttttaagagattgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaa 40737441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 5424874 - 5424786
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaa-aaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | || ||||||||  ||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||||    
T  5424874 tttttttagaggagagtgaaaatatgctttaaaagattgaactaattttgtaacaaaaaaatcccttttatatagttgtatccaaacaa 5424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 5424478 - 5424565
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | |||||||||||  ||||||||||||||| |||||||||||||||| ||  |||||| ||||| |||||||||||    
T  5424478 tttttttagaggatagagaaaatatggtttaaaagattgaacaaattttgtaacaaaaagtctcttttatatagttgtatccaaacaa 5424565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 17575304 - 17575213
Alignment:
Q  125 tattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaa-caaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||| |||| | |||||||||||  ||||||||||||||||||||||||||  ||||||||  |||||| ||||| |||||||||||    
T  17575304 tattttttgcagaggacagagaaaatatgatttaaaagattgaactaattttgtaataaaaaaatctcttttatatagttgtatccaaacaa 17575213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 27964889 - 27964830
Alignment:
Q  156 ttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||| |||||||||||    
T  27964889 ttaaaagattgaactagttttgtaacaaaaaatcccttttatatagttgtatccaaacaa 27964830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 1153646 - 1153744
Alignment:
Q  82 aaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaac 181  Q
    ||||||||| |||||||||| |||| |||||||||   ||||    ||||| ||||| | |||||||||||  |||||||||||||||||||||||||||    
T  1153646 aaatgagaagctgttaagagcagctactcaaaaaa---taga----tttttttagaggagagagaaaatatgatttaaaagattgaactaattttgtaac 1153738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 17073433 - 17073302
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||  ||||||||||  |      ||||| | ||||| | |||||||||||  |||||||||||||||||||||||    
T  17073433 cttcaaatgagaagctgttaagagcagtatctcaaaaaataa------attttgtttagaggagagagaaaatattgtttaaaagattgaactaattttg 17073340  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||| | |||||    |||||||||||||||    
T  17073339 taacaaaaaattcattttacacggttatatccaaacaa 17073302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 17574837 - 17574968
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||  ||||||||||  |      ||||| | ||||| | |||||||||||  |||||||||||||||||||||||    
T  17574837 cttcaaatgagaagctgttaagagcagtatctcaaaaaataa------attttgtttagaggagagagaaaatattgtttaaaagattgaactaattttg 17574930  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||| | |||||    |||||||||||||||    
T  17574931 taacaaaaaattcattttacacggttatatccaaacaa 17574968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 342700 - 342757
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||    
T  342700 aaaagattgaactaattttgtaacaaaaaatctcttttatatagttgtatccaaacaa 342757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 40796166 - 40796258
Alignment:
Q  125 tattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaa--tcctttttatctagttatatccaaacaa 215  Q
    |||||||| ||||| | |||||||||||  |||||||||||||||||||||||||| ||||||  || ||||||| ||| | |||||||||||    
T  40796166 tattttttttagaggagagagaaaatatggtttaaaagattgaactaattttgtaaaaaaaaaattcatttttatatagctgtatccaaacaa 40796258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 17072969 - 17073057
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaa-caaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| |||| | |||||||||||  ||||||||||||||||||||||||||  ||||||||  |||||| ||||| |||||||||||    
T  17072969 tttttgcagaggacagagaaaatatgatttaaaagattgaactaattttgtaataaaaaaatctcttttatatagttgtatccaaacaa 17073057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 5764983 - 5764896
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | |||||||||||   |||||| |||||| ||| ||||||||||||||||| |||||| ||||| |||||||||||    
T  5764983 tttttttagaggagagagaaaatattgcttaaaatattgaagtaactttgtaacaaaaaatcccttttatatagttgtatccaaacaa 5764896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 8377108 - 8377046
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatc 189  Q
    |||||||||||  |||||||||||||  || ||||||||||||||||||| ||||||||||||    
T  8377108 ttttttgtagaagaaagagaaaatatggttcaaaagattgaactaattttataacaaaaaatc 8377046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 15199818 - 15199745
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||  |||||||||||||||||||||||||| ||||||  | |||||| ||||| ||| |||||||    
T  15199818 agagaaaatattatttaaaagattgaactaattttgtaataaaaaactccttttatatagttgtattcaaacaa 15199745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 28152553 - 28152484
Alignment:
Q  143 gagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaa 212  Q
    ||||||||| || | ||||||||||||||||||||||||||| ||||  |||||| ||||| ||||||||    
T  28152553 gagaaaataaatatcaaaagattgaactaattttgtaacaaataatctattttatatagttgtatccaaa 28152484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 28828037 - 28828109
Alignment:
Q  145 gaaaatatattttaaaagattgaactaattttgtaac--aaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||  |||||||||||||||||| ||||||||  ||||||||| |||||| ||||| |||||||||||    
T  28828037 gaaaatatgatttaaaagattgaactaactttgtaacgaaaaaaatcccttttatatagttgtatccaaacaa 28828109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 27243313 - 27243277
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  27243313 aaggttttttctaaattacctttgaagaatggtgggt 27243277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 27254888 - 27254852
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  27254888 aaggttttttctaaattacctttgaagaatggtgggt 27254852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 32984266 - 32984226
Alignment:
Q  210 aaacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  32984266 aaacaaggttttttctagattacctttgaagaatggtgggt 32984226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 1580351 - 1580312
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcctttttat 197  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  1580351 aaaagattgaactaattttgtaacaaaaaatccattttat 1580312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 2379138 - 2379173
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  2379138 aggttttttctaaattacctttgaagaatggtgggt 2379173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 27882254 - 27882195
Alignment:
Q  156 ttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| || |||||||||||||||||  |||||| ||||| |||||||||||    
T  27882254 ttaaaagattgaattagttttgtaacaaaaaatctcttttatatagttgtatccaaacaa 27882195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 28022434 - 28022375
Alignment:
Q  156 ttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||||||||| || |||||||||||||||||  |||||| ||||| |||||||||||    
T  28022434 ttaaaagattgaattagttttgtaacaaaaaatctcttttatatagttgtatccaaacaa 28022375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 9713688 - 9713722
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  9713688 ggttttttctaaattacctttgaagaatggtgggt 9713722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 25248032 - 25248070
Alignment:
Q  210 aaacaaggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  25248032 aaacaaggttttttctagattacctttgaagaatggtgg 25248070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 27882395 - 27882527
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| ||||| ||||||||||||||||||   ||||   ||||||| ||||| | ||||||||| |   |  |||||||||||||||||||    
T  27882395 cttcaaatgagaagctgttgagagtagcttctcaaaaa---atag---attttttttagaggagagagaaaatgtggatctaaagattgaactaattttg 27882488  T
Q  178 taacaa-aaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||||  |||||| ||| | | |||||||||    
T  27882489 taacaataaaatcgcttttatatagctgtttccaaacaa 27882527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 28022575 - 28022707
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| ||||| ||||||||||||||||||   ||||   ||||||| ||||| | ||||||||| |   |  |||||||||||||||||||    
T  28022575 cttcaaatgagaagctgttgagagtagcttctcaaaaa---atag---attttttttagaggagagagaaaatgtggatctaaagattgaactaattttg 28022668  T
Q  178 taacaa-aaaatcctttttatctagttatatccaaacaa 215  Q
    |||||| ||||||  |||||| ||| | | |||||||||    
T  28022669 taacaataaaatcgcttttatatagctgtttccaaacaa 28022707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 31940314 - 31940348
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  31940314 ggttttttctaaattacctttgaagaatggtgggt 31940348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 41653891 - 41653928
Alignment:
Q  213 caaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||| |||||||||||||||||||||||    
T  41653891 caaggttttttctagattacctttgaagaatggtgggt 41653928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 117499 - 117467
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||    
T  117499 ttttttctaaattacctttgaagaatggtgggt 117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 5946044 - 5946080
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  5946044 aaggttttttctagattacctttgaagaatggtgggt 5946080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 10378306 - 10378342
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10378306 aaggttttttctaaattacctttgaaaaatggtgggt 10378342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 32693537 - 32693625
Alignment:
Q  127 ttttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||| | |||||||||||  |  ||| ||||||||||||||| | ||||||||| |  ||||| |||||||||| ||||||    
T  32693537 ttttttgtagaggagagagaaaatatggtacaaatgattgaactaattttcttacaaaaaattccgtttatatagttatatcaaaacaa 32693625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 37419937 - 37419973
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37419937 aaggttttttctagattacctttgaagaatggtgggt 37419973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 3490572 - 3490537
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3490572 aggttttttctaaattacctttgaaaaatggtgggt 3490537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 22878389 - 22878424
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  22878389 aggttttttctagattacctttgaagaatggtgggt 22878424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 41862218 - 41862253
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  41862218 aggttttttctagattacctttgaagaatggtgggt 41862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 45236749 - 45236714
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  45236749 aggttttttctagattacctttgaagaatggtgggt 45236714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 4447467 - 4447433
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||| ||||||||||    
T  4447467 ggttttttctaaattacctttgaaaaatggtgggt 4447433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 6365985 - 6366019
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  6365985 ggttttttctagattacctttgaagaatggtgggt 6366019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 12032951 - 12032985
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  12032951 ggttttttctagattacctttgaagaatggtgggt 12032985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 27965031 - 27965069
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaa 116  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  27965031 cttcaaatgagaagctgttgagagtagcttctcaaaaaa 27965069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 37301508 - 37301474
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  37301508 ggttttttctagattacctttgaagaatggtgggt 37301474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 37956420 - 37956454
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  37956420 ggttttttctagattacctttgaagaatggtgggt 37956454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 41843252 - 41843286
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||| ||||||||||    
T  41843252 ggttttttctaaattacctttgaaaaatggtgggt 41843286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 43328706 - 43328740
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  43328706 ggttttttctagattacctttgaagaatggtgggt 43328740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 2275913 - 2275946
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  2275913 gttttttctagattacctttgaagaatggtgggt 2275946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 6008097 - 6008044
Alignment:
Q  162 gattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||||||||||||||||||| |||||| || || ||| |||||||    
T  6008097 gattgaaataattttgtaacaaaaaatcccttttatataattgtatgcaaacaa 6008044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 24981579 - 24981542
Alignment:
Q  159 aaagattgaactaattttgtaacaaaaaatccttttta 196  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  24981579 aaagattgaattaattttgtaacaaaaaatccctttta 24981542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 187
Target Start/End: Complemental strand, 32855202 - 32855173
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaa 187  Q
    ||||||||||||||||||||||||||||||    
T  32855202 aaaagattgaactaattttgtaacaaaaaa 32855173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 239
Target Start/End: Complemental strand, 36804123 - 36804094
Alignment:
Q  210 aaacaaggttttttctaaattacctttgaa 239  Q
    ||||||||||||||||||||||||||||||    
T  36804123 aaacaaggttttttctaaattacctttgaa 36804094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 39915994 - 39915961
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||||| ||||||||||||||||||    
T  39915994 gttttttctaaattatctttgaagaatggtgggt 39915961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 40435335 - 40435302
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  40435335 gttttttctagattacctttgaagaatggtgggt 40435302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 40458943 - 40458910
Alignment:
Q  217 gttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| ||||||||||||||||||||||||    
T  40458943 gttttttctcaattacctttgaagaatggtgggt 40458910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 2714550 - 2714582
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  2714550 ttttttctagattacctttgaagaatggtgggt 2714582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 17718903 - 17718871
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  17718903 ttttttctagattacctttgaagaatggtgggt 17718871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 31831136 - 31831104
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  31831136 ttttttctagattacctttgaagaatggtgggt 31831104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 33622635 - 33622603
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||| ||||||||||||||||||||||||||    
T  33622635 ttttttttaaattacctttgaagaatggtgggt 33622603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 21981010 - 21980923
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||    
T  21981010 tttttttagaggagagagaaaatattttttaaaagattgaactaattttgtaacaaaaaattccttttatatagttgtatccaaacaa 21980923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 2258689 - 2258778
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||||| ||||| | |||||||||||  |||||||||||||||||||||||||||||||||||  |||||| ||||| |||| ||||||    
T  2258689 attttttttagaggagagagaaaatatgatttaaaagattgaactaattttgtaacaaaaaatctcttttatatagttgtatcaaaacaa 2258778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 190
Target Start/End: Complemental strand, 26209269 - 26209163
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| ||||||||||||||   ||||   |||||| ||||| | |||||||||| | ||||||| ||| |||||||||||    
T  26209269 cttcaaatgagaagctgttaagagcagcttctcaaaaaa---taga---ttttttttagaggagagagaaaatagaatttaaaatattaaactaattttg 26209176  T
Q  178 taacaaaaaatcc 190  Q
    |||||||||||||    
T  26209175 taacaaaaaatcc 26209163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 212
Target Start/End: Original strand, 7204759 - 7204872
Alignment:
Q  93 tgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctt 192  Q
    ||||||||| ||||||||||||||   ||||   |||||| ||||| | ||| |||||||  |||||||||||||||||||||||||||||||||||  |    
T  7204759 tgttaagagcagcttctcaaaaaa---taga---ttttttttagaggagagaaaaaatatgatttaaaagattgaactaattttgtaacaaaaaatctct 7204852  T
Q  193 tttatctagttatatccaaa 212  Q
    ||||| ||||| ||||||||    
T  7204853 tttatatagttgtatccaaa 7204872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 7858561 - 7858507
Alignment:
Q  125 tattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgta 179  Q
    |||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||    
T  7858561 tattttttttagaggaaagagaaaatatgttttaaaagattaaactaattttgta 7858507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 13329378 - 13329414
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  13329378 aaggttttttctaaattacctttgaagaatggtgggt 13329414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 28949019 - 28948983
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  28949019 aaggttttttctaaattacctttgaagaatggtgggt 28948983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 9740531 - 9740646
Alignment:
Q  79 ttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgt 178  Q
    ||||||| ||||||||||||||||||||| |||||||   ||||   ||||||| ||||| ||||||||||||    | ||   ||||||||||||||||    
T  9740531 ttcaaatcagaaactgttaagagtagcttgtcaaaaa---atag---attttttttagaggaaagagaaaataagggtcaa---attgaactaattttgt 9740621  T
Q  179 aacaaaaaatcctttttatctagtt 203  Q
    |||||||||||  |||||| |||||    
T  9740622 aacaaaaaatctcttttatatagtt 9740646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 10780177 - 10780246
Alignment:
Q  146 aaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||  ||||||||||||||||| |||| ||||||||||||  |||||| ||||| ||| |||||||    
T  10780177 aaaatatggtttaaaagattgaactagttttctaacaaaaaatctattttatatagttgtatacaaacaa 10780246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 33438752 - 33438680
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||||  |||||||||||||||||||||| |||| |||||||  |||||| ||||| ||| |||||||    
T  33438752 agagaaaatatggtttaaaagattgaactaattttttaac-aaaaatctcttttatatagttgtattcaaacaa 33438680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 1970708 - 1970744
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1970708 aaggttttttctagattacctttgaagaatggtgggt 1970744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 3291009 - 3291041
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||    
T  3291009 ttttttctaaattacctttgaagaatggtgggt 3291041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 3306922 - 3307024
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| |||||||||| |||||||||||||   ||||   ||||| | ||||  | |||||||||||   |||||||||||||||| |||||    
T  3306922 cttcaaatgagaagctgttaagagcagcttctcaaaaa---atag---attttgtttagaagagagagaaaatatgaattaaaagattgaactagttttg 3307015  T
Q  178 taacaaaaa 186  Q
    ||| |||||    
T  3307016 taaaaaaaa 3307024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 8615237 - 8615273
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8615237 aaggttttttctagattacctttgaagaatggtgggt 8615273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 16703363 - 16703399
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  16703363 aaggttttttctagattacctttgaagaatggtgggt 16703399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 22551246 - 22551210
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22551246 aaggttttttctagattacctttgaagaatggtgggt 22551210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 599890 - 599925
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  599890 aggttttttctagattacctttgaagaatggtgggt 599925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 250
Target Start/End: Complemental strand, 960092 - 960053
Alignment:
Q  211 aacaaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  960092 aacaaagttttttctagattacctttgaagaatggtgggt 960053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 19415717 - 19415682
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  19415717 aggttttttctagattacctttgaagaatggtgggt 19415682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 28947085 - 28947120
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||| |||||||||||||||||||||||    
T  28947085 aggttttttctagattacctttgaagaatggtgggt 28947120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 3786742 - 3786780
Alignment:
Q  210 aaacaaggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  3786742 aaacaatgttttttctaaattacttttgaagaatggtgg 3786780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 5882505 - 5882539
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  5882505 ggttttttctagattacctttgaagaatggtgggt 5882539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 15965432 - 15965466
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||| ||||||||||||||||||    
T  15965432 ggttttttctaaattatctttgaagaatggtgggt 15965466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 19281238 - 19281204
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  19281238 ggttttttctagattacctttgaagaatggtgggt 19281204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 26001257 - 26001323
Alignment:
Q  146 aaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttatatccaaa 212  Q
    |||||||| || |||| ||| |||||||||| ||||||||||||  |||||| ||||| ||||||||    
T  26001257 aaaatataattcaaaatattaaactaattttttaacaaaaaatctcttttatatagttgtatccaaa 26001323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 26377387 - 26377353
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||| ||||||||||||||||||    
T  26377387 ggttttttctaaattatctttgaagaatggtgggt 26377353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 30467786 - 30467752
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  30467786 ggttttttctagattacctttgaagaatggtgggt 30467752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 929657 - 929690
Alignment:
Q  215 aggttttttctaaattacctttgaagaatggtgg 248  Q
    |||||||||||| |||||||||||||||||||||    
T  929657 aggttttttctagattacctttgaagaatggtgg 929690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 5679070 - 5679115
Alignment:
Q  142 agagaaaatatattttaaaagattgaactaattttgtaacaaaaaa 187  Q
    |||||||| ||  |||||||||||||||||||||| ||||||||||    
T  5679070 agagaaaaaatggtttaaaagattgaactaattttataacaaaaaa 5679115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 2892189 - 2892221
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  2892189 ttttttctagattacctttgaagaatggtgggt 2892221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 11743129 - 11743093
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  11743129 aaggttttttctagattacccttgaagaatggtgggt 11743093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 24168090 - 24168122
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||| |||||||||||||||||||||    
T  24168090 ggttttttctagattacctttgaagaatggtgg 24168122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 30743629 - 30743597
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  30743629 ttttttctagattacctttgaagaatggtgggt 30743597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 32952577 - 32952541
Alignment:
Q  158 aaaagattgaactaattttgtaacaaaaaatcctttt 194  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  32952577 aaaagattgatctaattttgtaacaaaaaatcttttt 32952541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 22091 - 22012
Alignment:
Q  126 attttttgtagagcaaagagaaaatatattttaaaagattgaactaattttgtaacaaaaaatcctttttatctagttat 205  Q
    ||||||| ||||| | ||||||||||||  ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  22091 attttttttagaggagagagaaaatatagattaaaagattgaactaattttgtaacaaaaaatcccttttatatagttat 22012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 21696 - 21768
Alignment:
Q  144 agaaaatatattttaaaagattgaactaattttgtaac-aaaaaatcctttttatctagttatatccaaacaa 215  Q
    |||||||||  |||||||||||||||||||||||| || ||||||||| |||||| ||| | |||| ||||||    
T  21696 agaaaatattgtttaaaagattgaactaattttgtcacaaaaaaatccattttatatagctgtatctaaacaa 21768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 150138 - 150268
Alignment:
Q  78 cttcaaatgagaaactgttaagagtagcttctcaaaaaagtatagagtattttttgtagagcaaagagaaaatatattttaaaagattgaactaattttg 177  Q
    ||||||||||||| || ||||||||| |||||||||||    ||   | |||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  150138 cttcaaatgagaagctattaagagtatcttctcaaaaa----ta---ttttttttttagaggagagagaaaatatggtttaaaagattgaactaattttg 150230  T
Q  178 taacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    | | ||||||||| |||||| || ||  ||||||||||    
T  150231 ttataaaaaatcccttttatataattgcatccaaacaa 150268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0721 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 7089 - 7123
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  7089 ggttttttctaaattacctttgaagaatggtgggt 7123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 1955 - 1990
Alignment:
Q  155 tttaaaagattgaactaattttgtaacaaaaaatcc 190  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1955 tttaaaagattaaactaattttgtaacaaaaaatcc 1990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 17905 - 17939
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    |||||||||||||||||||||||| ||||||||||    
T  17905 ggttttttctaaattacctttgaaaaatggtgggt 17939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 3337 - 3246
Alignment:
Q  128 tttttgtagagcaaagagaaaatatattttaaaagattgaactaatt----ttgtaacaaaaaatcctttttatctagttatatccaaacaa 215  Q
    ||||| ||||| | |||||||||||   | |||||||||||||||||    |||||||||||||||  |||||| ||||| |||||||||||    
T  3337 tttttttagagaagagagaaaatatgagtcaaaagattgaactaattaattttgtaacaaaaaatcacttttatatagttgtatccaaacaa 3246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 2615 - 2581
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  2615 ggttttttctagattacctttgaagaatggtgggt 2581  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 32560 - 32594
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  32560 ggttttttctagattacctttgaagaatggtgggt 32594  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 39739 - 39705
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  39739 ggttttttctagattacctttgaagaatggtgggt 39705  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 75427 - 75393
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||| |||||||||||||||||||||||    
T  75427 ggttttttctagattacctttgaagaatggtgggt 75393  T

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Target: scaffold2003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 99 - 135
Alignment:
Q  214 aaggttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  99 aaggttttttctagattacctttgaaaaatggtgggt 135  T

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Target: scaffold0394 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 3089 - 3121
Alignment:
Q  218 ttttttctaaattacctttgaagaatggtgggt 250  Q
    ||||||||| |||||||||||||||||||||||    
T  3089 ttttttctagattacctttgaagaatggtgggt 3121  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 13945 - 13913
Alignment:
Q  216 ggttttttctaaattacctttgaagaatggtgg 248  Q
    ||||||||||| |||||||||||||||||||||    
T  13945 ggttttttctagattacctttgaagaatggtgg 13913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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