View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18077_low_26 (Length: 361)

Name: NF18077_low_26
Description: NF18077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18077_low_26
NF18077_low_26
[»] chr3 (47 HSPs)
chr3 (201-336)||(45594245-45594383)
chr3 (13-191)||(20512469-20512651)
chr3 (20-191)||(32303885-32304059)
chr3 (20-191)||(2988590-2988763)
chr3 (20-191)||(54933185-54933359)
chr3 (20-184)||(25722441-25722608)
chr3 (20-191)||(43169333-43169507)
chr3 (20-191)||(54261414-54261588)
chr3 (20-184)||(43687863-43688033)
chr3 (13-184)||(36541497-36541671)
chr3 (13-191)||(51381720-51381904)
chr3 (13-188)||(42007035-42007212)
chr3 (20-184)||(44645344-44645512)
chr3 (68-191)||(4391903-4392027)
chr3 (36-191)||(37225593-37225749)
chr3 (36-191)||(83295-83450)
chr3 (102-191)||(46363075-46363165)
chr3 (102-191)||(22730924-22731013)
chr3 (83-190)||(38457460-38457565)
chr3 (102-191)||(44854314-44854402)
chr3 (22-139)||(53560715-53560835)
chr3 (83-191)||(3000751-3000858)
chr3 (83-191)||(43580474-43580582)
chr3 (60-191)||(49470788-49470922)
chr3 (36-191)||(647590-647745)
chr3 (147-191)||(19552539-19552583)
chr3 (147-188)||(1341030-1341071)
chr3 (102-191)||(15514790-15514880)
chr3 (147-188)||(45095555-45095596)
chr3 (147-191)||(2568113-2568157)
chr3 (147-191)||(26965609-26965653)
chr3 (83-191)||(27027732-27027838)
chr3 (147-191)||(34059875-34059919)
chr3 (147-191)||(36771677-36771721)
chr3 (148-191)||(44648512-44648555)
chr3 (102-191)||(50420258-50420346)
chr3 (17-83)||(10351992-10352058)
chr3 (112-184)||(43600266-43600337)
chr3 (147-191)||(25061703-25061747)
chr3 (147-190)||(27483294-27483337)
chr3 (147-190)||(53716029-53716072)
chr3 (147-188)||(41287078-41287119)
chr3 (147-191)||(790095-790139)
chr3 (147-191)||(5244585-5244629)
chr3 (147-191)||(13485915-13485959)
chr3 (147-191)||(51058260-51058304)
chr3 (147-191)||(52202401-52202445)
[»] chr5 (34 HSPs)
chr5 (13-191)||(33584948-33585129)
chr5 (13-184)||(33822476-33822650)
chr5 (20-191)||(42329526-42329700)
chr5 (23-191)||(793589-793760)
chr5 (20-191)||(34171163-34171334)
chr5 (13-184)||(29653487-29653661)
chr5 (13-135)||(27652294-27652419)
chr5 (22-191)||(4833620-4833787)
chr5 (68-191)||(166679-166803)
chr5 (13-120)||(36296107-36296217)
chr5 (102-191)||(36660426-36660515)
chr5 (23-139)||(29044770-29044888)
chr5 (68-191)||(38982175-38982299)
chr5 (81-191)||(27810345-27810453)
chr5 (102-191)||(13066712-13066801)
chr5 (102-187)||(15400174-15400259)
chr5 (102-188)||(28640084-28640170)
chr5 (20-134)||(32962990-32963106)
chr5 (83-191)||(4371362-4371468)
chr5 (147-191)||(7388291-7388335)
chr5 (70-191)||(4742298-4742421)
chr5 (70-191)||(4751562-4751685)
chr5 (113-191)||(31557411-31557489)
chr5 (147-184)||(41845392-41845429)
chr5 (148-191)||(12167693-12167736)
chr5 (81-191)||(17674207-17674315)
chr5 (104-191)||(39059805-39059891)
chr5 (147-191)||(7731703-7731747)
chr5 (102-191)||(12992063-12992150)
chr5 (147-191)||(14980149-14980193)
chr5 (147-188)||(43257961-43258002)
chr5 (147-191)||(4011746-4011790)
chr5 (147-191)||(27658682-27658726)
chr5 (147-191)||(31889741-31889785)
[»] chr4 (41 HSPs)
chr4 (20-191)||(31941553-31941727)
chr4 (20-191)||(24259606-24259780)
chr4 (20-191)||(34124290-34124464)
chr4 (13-191)||(47321139-47321321)
chr4 (13-191)||(17499693-17499874)
chr4 (20-184)||(28116247-28116414)
chr4 (20-191)||(45889559-45889732)
chr4 (20-191)||(19282393-19282567)
chr4 (20-189)||(55126494-55126666)
chr4 (20-191)||(51434240-51434414)
chr4 (20-191)||(6462004-6462183)
chr4 (70-191)||(19849079-19849201)
chr4 (20-191)||(4408160-4408335)
chr4 (102-188)||(31987302-31987388)
chr4 (81-213)||(22212314-22212444)
chr4 (102-182)||(30492732-30492812)
chr4 (59-191)||(30022063-30022196)
chr4 (102-191)||(29840070-29840160)
chr4 (59-188)||(45520482-45520611)
chr4 (102-191)||(35928486-35928575)
chr4 (102-191)||(37445655-37445744)
chr4 (102-191)||(54091953-54092042)
chr4 (20-100)||(54233902-54233985)
chr4 (102-191)||(6510113-6510202)
chr4 (83-190)||(17317893-17317999)
chr4 (147-191)||(21045151-21045195)
chr4 (147-191)||(50072276-50072320)
chr4 (147-191)||(52732594-52732638)
chr4 (17-52)||(34534073-34534108)
chr4 (157-191)||(38692409-38692443)
chr4 (36-135)||(34096067-34096167)
chr4 (147-184)||(45903518-45903555)
chr4 (147-191)||(1868211-1868255)
chr4 (156-188)||(3093351-3093383)
chr4 (147-191)||(15501258-15501302)
chr4 (147-191)||(51930595-51930639)
chr4 (147-191)||(56556366-56556410)
chr4 (112-184)||(11835109-11835181)
chr4 (147-188)||(45049707-45049748)
chr4 (147-191)||(6232147-6232191)
chr4 (147-191)||(32141075-32141119)
[»] chr7 (35 HSPs)
chr7 (20-191)||(36447051-36447225)
chr7 (20-191)||(32345816-32345990)
chr7 (17-191)||(31416729-31416906)
chr7 (20-184)||(39117470-39117636)
chr7 (13-191)||(19906413-19906592)
chr7 (13-191)||(26963478-26963659)
chr7 (13-191)||(30514972-30515153)
chr7 (20-191)||(6521817-6521990)
chr7 (13-191)||(10684804-10684985)
chr7 (68-191)||(40298846-40298970)
chr7 (83-184)||(42044026-42044127)
chr7 (20-191)||(36836058-36836231)
chr7 (59-181)||(34002154-34002277)
chr7 (83-191)||(1103483-1103589)
chr7 (102-191)||(3680988-3681077)
chr7 (36-191)||(41905933-41906088)
chr7 (68-184)||(5723009-5723125)
chr7 (92-184)||(19288403-19288495)
chr7 (104-188)||(30833161-30833245)
chr7 (36-191)||(42259547-42259702)
chr7 (102-188)||(19920337-19920423)
chr7 (102-188)||(26527462-26527548)
chr7 (147-191)||(28044242-28044286)
chr7 (70-191)||(17869236-17869358)
chr7 (147-191)||(18733452-18733496)
chr7 (147-191)||(18886668-18886712)
chr7 (147-191)||(22597229-22597273)
chr7 (147-191)||(32873274-32873318)
chr7 (147-191)||(36447712-36447756)
chr7 (147-191)||(43813455-43813499)
chr7 (36-139)||(34733362-34733464)
chr7 (147-184)||(22627457-22627494)
chr7 (147-188)||(40805026-40805067)
chr7 (22-113)||(29001548-29001642)
chr7 (147-191)||(42121549-42121593)
[»] chr6 (21 HSPs)
chr6 (23-191)||(17345119-17345290)
chr6 (24-191)||(34576542-34576712)
chr6 (22-191)||(25932626-25932799)
chr6 (22-191)||(26189506-26189679)
chr6 (36-191)||(29927205-29927362)
chr6 (36-191)||(12828679-12828835)
chr6 (104-191)||(4132042-4132129)
chr6 (68-191)||(31275671-31275796)
chr6 (102-191)||(4123920-4124009)
chr6 (83-191)||(6140598-6140705)
chr6 (59-191)||(29915539-29915673)
chr6 (83-191)||(32258720-32258828)
chr6 (87-191)||(6143082-6143186)
chr6 (102-191)||(34439479-34439567)
chr6 (13-82)||(6992511-6992580)
chr6 (81-191)||(11785149-11785255)
chr6 (147-191)||(1924774-1924818)
chr6 (102-191)||(30627089-30627178)
chr6 (147-184)||(3015921-3015958)
chr6 (102-191)||(8052343-8052431)
chr6 (147-191)||(10494872-10494916)
[»] scaffold0047 (1 HSPs)
scaffold0047 (20-191)||(70435-70609)
[»] chr2 (31 HSPs)
chr2 (20-191)||(2459771-2459945)
chr2 (14-191)||(41984416-41984597)
chr2 (20-188)||(39866653-39866824)
chr2 (13-191)||(10580831-10581012)
chr2 (20-191)||(43388639-43388811)
chr2 (20-191)||(775866-776039)
chr2 (22-191)||(33093366-33093537)
chr2 (20-139)||(25332620-25332742)
chr2 (13-188)||(4566096-4566274)
chr2 (50-189)||(7743401-7743541)
chr2 (36-191)||(24775187-24775343)
chr2 (20-113)||(14698064-14698160)
chr2 (36-184)||(4840725-4840874)
chr2 (104-191)||(18374831-18374918)
chr2 (59-180)||(16316718-16316840)
chr2 (153-191)||(45372648-45372686)
chr2 (105-191)||(4536572-4536658)
chr2 (147-188)||(14378334-14378375)
chr2 (81-191)||(43344269-43344375)
chr2 (102-191)||(1360175-1360264)
chr2 (147-191)||(34225771-34225815)
chr2 (147-191)||(45148062-45148106)
chr2 (36-184)||(36360373-36360520)
chr2 (83-165)||(37106886-37106966)
chr2 (147-191)||(29795300-29795344)
chr2 (147-190)||(4766298-4766341)
chr2 (20-54)||(38809835-38809869)
chr2 (147-185)||(40987381-40987419)
chr2 (102-191)||(6591963-6592053)
chr2 (81-170)||(43460792-43460879)
chr2 (147-191)||(14698010-14698054)
[»] chr1 (50 HSPs)
chr1 (20-184)||(44582760-44582927)
chr1 (20-191)||(26252116-26252290)
chr1 (20-191)||(254893-255068)
chr1 (20-191)||(28200204-28200379)
chr1 (17-189)||(42650228-42650402)
chr1 (22-191)||(44024543-44024715)
chr1 (22-191)||(17806359-17806529)
chr1 (20-191)||(2459006-2459176)
chr1 (20-191)||(22664937-22665107)
chr1 (22-138)||(5854208-5854327)
chr1 (68-191)||(11650056-11650180)
chr1 (68-191)||(12002244-12002368)
chr1 (20-139)||(672264-672383)
chr1 (13-100)||(49894869-49894959)
chr1 (50-191)||(5317590-5317731)
chr1 (20-113)||(9333160-9333250)
chr1 (20-113)||(9356933-9357023)
chr1 (59-186)||(2245789-2245919)
chr1 (36-178)||(28751406-28751549)
chr1 (104-184)||(40719020-40719100)
chr1 (20-190)||(11134442-11134614)
chr1 (82-191)||(15698798-15698905)
chr1 (69-190)||(1428865-1428987)
chr1 (20-116)||(9552337-9552436)
chr1 (68-184)||(17919850-17919967)
chr1 (68-184)||(45377180-45377297)
chr1 (22-113)||(50591302-50591396)
chr1 (102-191)||(15647128-15647215)
chr1 (147-191)||(84604-84648)
chr1 (147-191)||(24041111-24041155)
chr1 (102-191)||(43738319-43738408)
chr1 (106-183)||(52403482-52403559)
chr1 (103-191)||(12851739-12851827)
chr1 (50-191)||(44583770-44583912)
chr1 (102-184)||(50158371-50158454)
chr1 (83-191)||(6332164-6332271)
chr1 (37-113)||(38132189-38132268)
chr1 (147-184)||(40061007-40061044)
chr1 (147-191)||(9552440-9552484)
chr1 (147-191)||(38132278-38132322)
chr1 (148-188)||(43105692-43105732)
chr1 (147-191)||(48259964-48260008)
chr1 (147-188)||(6377387-6377428)
chr1 (153-186)||(10691047-10691080)
chr1 (147-184)||(43755058-43755095)
chr1 (147-191)||(9333105-9333149)
chr1 (147-191)||(9356878-9356922)
chr1 (147-191)||(26582923-26582967)
chr1 (110-191)||(43929683-43929764)
chr1 (147-191)||(48320100-48320144)
[»] chr8 (34 HSPs)
chr8 (20-188)||(18673081-18673251)
chr8 (13-189)||(34461557-34461737)
chr8 (20-191)||(14541728-14541900)
chr8 (20-184)||(34168194-34168353)
chr8 (20-184)||(27416506-27416673)
chr8 (13-184)||(13108993-13109166)
chr8 (37-191)||(7612496-7612651)
chr8 (20-113)||(8471333-8471429)
chr8 (83-191)||(9022393-9022499)
chr8 (36-191)||(11257540-11257694)
chr8 (68-189)||(3095534-3095656)
chr8 (83-188)||(8382526-8382629)
chr8 (102-191)||(5588539-5588628)
chr8 (69-191)||(27109852-27109975)
chr8 (115-191)||(36915365-36915441)
chr8 (68-184)||(32661310-32661427)
chr8 (59-191)||(22601134-22601266)
chr8 (83-191)||(35052469-35052577)
chr8 (81-190)||(30788934-30789041)
chr8 (147-191)||(1774170-1774214)
chr8 (147-191)||(2803348-2803392)
chr8 (147-191)||(32061534-32061578)
chr8 (147-191)||(38329140-38329184)
chr8 (102-191)||(42946120-42946209)
chr8 (94-187)||(5044284-5044378)
chr8 (147-184)||(16208955-16208992)
chr8 (147-181)||(8107270-8107304)
chr8 (153-191)||(11336124-11336162)
chr8 (83-184)||(32326773-32326873)
chr8 (147-184)||(2067728-2067764)
chr8 (147-184)||(7129306-7129343)
chr8 (147-191)||(29931342-29931386)
chr8 (123-184)||(33870759-33870820)
chr8 (147-191)||(45187395-45187439)
[»] scaffold0003 (1 HSPs)
scaffold0003 (20-191)||(321724-321898)
[»] scaffold0189 (1 HSPs)
scaffold0189 (102-191)||(13124-13213)
[»] scaffold0886 (1 HSPs)
scaffold0886 (69-191)||(4140-4263)
[»] scaffold0519 (1 HSPs)
scaffold0519 (70-191)||(7732-7852)
[»] scaffold0194 (1 HSPs)
scaffold0194 (84-191)||(8156-8263)
[»] scaffold0060 (1 HSPs)
scaffold0060 (147-191)||(31623-31667)
[»] scaffold0565 (1 HSPs)
scaffold0565 (155-191)||(10074-10110)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 201 - 336
Target Start/End: Original strand, 45594245 - 45594383
Alignment:
Q  201 ctaaagcgacattcagg-gtattata--ttattttggtgaagtcatcatagcaaatcaggacagagggaaacgtaaacatgagaggaacaaaacaaatta 297  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45594245 ctaaagcgacattcaggagtattatacattattttggtgaagtcatcgtagcaaatcaggacagagggaaacataaacatgagaggaacaaaacaaatta 45594344  T
Q  298 aatcatgcttaacattttgttatcttctaaggaacaaaa 336  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45594345 aatcatgcttaacattttgttatcttctaaggaacaaaa 45594383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 20512469 - 20512651
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| ||||||||||||||||||||||||||||||||||| || |||||||  | |||||||||||||   |||||||| ||||||||| ||||||||    
T  20512469 aaaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagt 20512568  T
Q  110 tggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||||||||||        ||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  20512569 tggagtatttattgaaggtaaagttggaagaaaaaaatttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 20512651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 32303885 - 32304059
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||||||| || |||||||  || ||||||||||   |||||||||| ||||| ||| ||||||||| |||||    
T  32303885 tcaaatgtcatagcaattttactaaaataaccttactttataagaaaaaggcaaacttaaagctgtattgaaaattgtgtaagagagaaaagtttgagta 32303984  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||||||||||||||||||||||||||||||| |||||||    
T  32303985 tttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttcaaaacaa 32304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 2988590 - 2988763
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| |||| |||| ||||||||| |||||    
T  2988590 tcaaatgtcatagcaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagta 2988689  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       || ||||||||||| ||||||||||||||||||||||| ||||||    
T  2988690 tttattgagggtaaagttggaagaaaaaaatt-aaattgtattggaaatgtaaagtgacattcattttgaaacaa 2988763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 54933185 - 54933359
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||   ||||||||||||||   |||||||| ||||||||| |||||||||||||||    
T  54933185 tcaaatgtcataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagta 54933284  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||| |||| ||||||||||||||||||||||| ||||||    
T  54933285 tttattgagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 54933359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 25722441 - 25722608
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || | |||||| |||||||||||||||   |||||||| ||||||||| |||||||||||||||    
T  25722441 tcaaatgtcataacaattttactaaaataaccttactttacaagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagta 25722540  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||||| | ||||||||  ||||       ||||| ||||||||||||||||||||||||||||||||    
T  25722541 tttatttagggtaaagtatgaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 25722608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 43169507 - 43169333
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||| ||| ||||||||||||||||||| || |||||||| |||||||||||||   |||||||||| ||||||||| | ||||||| |||||    
T  43169507 tcaaatgtcattgcagttttactaaaataaccttactttataagaataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagta 43169408  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||| ||||       ||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  43169407 tttattgaaggtaaagttagaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 43169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 54261588 - 54261414
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||  | |||||||||||||   |||||||| ||||||||| ||||||||| |||||    
T  54261588 tcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttagagta 54261489  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||| ||||||||||||||| ||| |||||||| ||||||    
T  54261488 tttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacgttcattttgaaacaa 54261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 43687863 - 43688033
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||  ||||||| |||||||   |||||||| ||||||||| |||||||||||||||    
T  43687863 tcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagta 43687962  T
Q  117 tttattgaaggtaaagttggaag---nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||||||| ||||||||||||||          ||||| |||||||| ||||||||||||||||| |||||    
T  43687963 tttattgagggtaaagttggaagaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttatttt 43688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 36541671 - 36541497
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| |||||||| ||||||||||||||||||| |||||  || ||| |||  |||||||||||||||   || ||||| ||||||||| ||||||||    
T  36541671 aaaatagtcaaatgttatagcaattttactaaaattaccttgctttataggaacaagacaaacttaaagttgcatcgaaaattgtgtgagagagaaaagt 36541572  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||| |||||||||| ||||||||||||||        |||| ||||||||||||||||||  ||||||||||||    
T  36541571 tggaatatttattgagggtaaagttggaagaaataaagtaaagttgtattgaaaatgtaaaacgacattcatttt 36541497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 51381904 - 51381720
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgt--gagatagaaaa 107  Q
    |||||| |||||| |||||||| ||||||||||||||||||| || |||| ||  |||||||||||||||   |||||||| |||||  |||| ||||||    
T  51381904 aaaatagtcaaatatcatagcagttttactaaaataaccttactttataataaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaa 51381805  T
Q  108 gttggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
     ||||||||||||| || ||||||||| ||||        ||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  51381804 attggagtatttatcgagggtaaagttagaagaaaaaaaattaaagttgtattgtaaatgtaaagtgacatttattttgaaacaa 51381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 42007035 - 42007212
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| ||| |||||||||||||||| |||||||||||||| || |||||||  |||||||||||||||   |||||||| ||| ||| | | ||||||    
T  42007035 aaaatagtcagatgtcatagcaatttttctaaaataaccttattttataagaacaagacaaacttaaagttgcattgaaaattgtatgaaagaaaaaagt 42007134  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    | ||||||||||| | | |||||||  ||        ||||||||||||||||||||||||  ||||||||||||||||    
T  42007135 ttgagtatttattaaggataaagtt-taaaaaaaaatttaaaattgtattgaaaatgtaaaacgacattcattttaaaa 42007212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 44645512 - 44645344
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataa-ccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagt 115  Q
    |||||| ||||||||||||| ||||||||| ||||| || ||| |||  ||| |||||||||||   |||||||| | ||| ||| ||||||||||||||    
T  44645512 tcaaatatcatagcaattttgctaaaataaaccttactttatatgaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagt 44645413  T
Q  116 atttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||||||| ||||||||||||||       ||||| ||| || | |||||||||| ||||||||||||    
T  44645412 atttattgagggtaaagttggaagaaaaaaattaaagttgcatgggaaatgtaaagcgacattcatttt 44645344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 4392027 - 4391903
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| |||| ||||  |||||||||||||||||||||| ||||||||||| ||       ||||||||||| | ||||    
T  4392027 agacaaacttaaagttgcattgaaaattgtgcgaga--gaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaaattgtactaaaaa 4391930  T
Q  165 tgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||| ||||||||||||||||    
T  4391929 tgtaaagtgatattcattttaaaacaa 4391903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 37225593 - 37225749
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| |  ||||| || |||||||  ||||||| |||||||   |||||||| |||||||||  |||||||| | ||||||||||| |||||||    
T  37225593 ttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttagcgtatttattgagggtaaag 37225690  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||       ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  37225691 ttggaagaaaagaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 37225749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 83450 - 83295
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| || ||||| || |||||||  |||||||||||||||   |||||||| || ||||||  |||||||| ||||||||| ||| |||||||    
T  83450 ttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgcgtgaga--gaaaagttagagtatttaatgagggtaaag 83353  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||       ||||| |||||||||||||||||| ||||||||||||| ||||||    
T  83352 ttggaag-aaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 83295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 46363075 - 46363165
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn-ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||| ||||||||||||||        ||||| |||||||||||||||||||||||||||||||| ||||||    
T  46363075 agaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 46363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 22731013 - 22730924
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||| ||||||||||||||||||||||||||||       ||||| |||||||| ||||||||| ||||||||| ||||||||||    
T  22731013 agaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 22730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 38457565 - 38457460
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    |||||||| |||||||||  |||||||||||||||||||||| |||||||||||| |       ||||| |||||||||||||||||| ||| |||||||    
T  38457565 attgaaaattgtgtgaga--gaaaagttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcatt 38457468  T
Q  183 ttaaaaca 190  Q
    || |||||    
T  38457467 ttgaaaca 38457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 44854402 - 44854314
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||| |||||| |||||||       ||||||||||||||||||||||||||||| |||||||| ||||||    
T  44854402 agaaaagttggagtatttattgagggtaaaattggaagaaaaag-ttaaaattgtattgaaaatgtaaagtgacgttcattttgaaacaa 44854314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 53560835 - 53560715
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatt 118  Q
    ||||||||||  ||||||||||||||||||||| || |||||||  |||||| ||||||||   |||||||| | ||||||| ||||||||| |||| ||    
T  53560835 aaatgtcataataattttactaaaataaccttactttataagaaaaagacaatcttaaagttgcattgaaaattatgtgagagagaaaagtttgagtttt 53560736  T
Q  119 tattgaaggtaaagttggaag 139  Q
    ||| || | ||||||||||||    
T  53560735 tatcgaggataaagttggaag 53560715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 3000858 - 3000751
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn-ttaaaattgtattgaaaatgtaaagtgacattcat 181  Q
    |||||||| |||||||||  |||||||||||||||||||||| |||| |||||| ||        ||||| |||||||||||||||||||| ||||||||    
T  3000858 attgaaaattgtgtgaga--gaaaagttggagtatttattgagggtagagttgggagaaaaaaaattaaagttgtattgaaaatgtaaagtaacattcat 3000761  T
Q  182 tttaaaacaa 191  Q
    ||||||||||    
T  3000760 tttaaaacaa 3000751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 43580582 - 43580474
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn-ttaaaattgtattgaaaatgtaaagtgacattcat 181  Q
    |||||||| ||||||||| | ||||||||||||||||||| | ||||||||||||||        ||||| |||||||||||||||||||||||||| ||    
T  43580582 attgaaaattgtgtgagaaa-aaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacatttat 43580484  T
Q  182 tttaaaacaa 191  Q
    ||| ||||||    
T  43580483 tttgaaacaa 43580474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 49470922 - 49470788
Alignment:
Q  60 taagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgt 156  Q
    ||||||| ||||||||||||||    |||||||| ||||| ||| ||||||||||||||||||||||  | |||| ||||| |       ||||| ||||    
T  49470922 taagaataagacaaacttaaagctgcattgaaaattgtgtaagagagaaaagttggagtatttattgtggctaaatttggatgaaaaaaattaaagttgt 49470823  T
Q  157 attgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||  |||||||||||| ||||||    
T  49470822 attgaaaatgtaaaacgacattcattttgaaacaa 49470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 647590 - 647745
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| |  ||||| || |||||||  |||||||||||||||   |||||||| | ||| |||  |||||||| ||||||||||||| |||||||    
T  647590 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattctgtaaga--gaaaagttagagtatttattgagggtaaag 647687  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||       ||||| |||||||||||||||||| ||| | ||||||| ||||||    
T  647688 ttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgata-tcatttttaaacaa 647745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 19552583 - 19552539
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  19552583 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 19552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 1341030 - 1341071
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  1341030 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaa 1341071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 15514790 - 15514880
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||| |||||||||||||||||| ||        ||||| |||||||| ||||||||||||||||| |||| |||||||    
T  15514790 agaaaagttggagtatctattgaaggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacatttatttgaaaacaa 15514880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 45095596 - 45095555
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  45095596 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaa 45095555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 2568113 - 2568157
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  2568113 ttaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 2568157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 26965609 - 26965653
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  26965609 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 26965653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 27027838 - 27027732
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    |||||||| |||||||||  |||||||||||||||||||| | | ||||||| ||||       ||||| |||||||| ||||||||| ||||||| |||    
T  27027838 attgaaaattgtgtgaga--gaaaagttggagtatttattaaggataaagtttgaagaaaaaaattaaatttgtattggaaatgtaaattgacattaatt 27027741  T
Q  183 ttaaaacaa 191  Q
    || ||||||    
T  27027740 ttgaaacaa 27027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 34059919 - 34059875
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  34059919 ttaaagttgtattgaaaatgtaaaatgacattcattttaaaacaa 34059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 36771677 - 36771721
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  36771677 ttaaagttgtattgtaaatgtaaagtgacattcattttaaaacaa 36771721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 44648512 - 44648555
Alignment:
Q  148 taaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||| |||||||| ||||||||||||||||||||||||||||||    
T  44648512 taaagttgtattggaaatgtaaagtgacattcattttaaaacaa 44648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 50420346 - 50420258
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||| |||||||||||||| |||||||||||||       ||||| ||||||| |||||||||| ||||||| ||||| ||||||    
T  50420346 agaaaagttagagtatttattgaaagtaaagttggaag-aaaaaattaaagttgtattaaaaatgtaaaatgacatttatttttaaacaa 50420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 10351992 - 10352058
Alignment:
Q  17 taatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagta 83  Q
    ||||||||| |||||||||||| |||| ||||| |||| || |||||||| ||||||| ||||||||    
T  10351992 taatcaaatatcatagcaatttcactacaataatcttattttataagaataagacaaatttaaagta 10352058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 43600266 - 43600337
Alignment:
Q  112 gagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||||||||||| ||||||||||||||       |||||||||||||||||||||||||| ||||| |||||    
T  43600266 gagtatttattgagggtaaagttggaagaaaaaa-ttaaaattgtattgaaaatgtaaagtaacatttatttt 43600337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 25061747 - 25061703
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||    
T  25061747 ttaaagttgtattggaaatgtaaagtggcattcattttaaaacaa 25061703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 27483294 - 27483337
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaaca 190  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||    
T  27483294 ttaaagttgtattggaaatgtaaagtgacattcattttgaaaca 27483337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 53716072 - 53716029
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaaca 190  Q
    ||||| |||||||| ||||||||||| |||||||||||||||||    
T  53716072 ttaaagttgtattggaaatgtaaagtaacattcattttaaaaca 53716029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 41287119 - 41287078
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  41287119 ttaaagttgtattggaaatgtaaagtgacatccattttaaaa 41287078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 790139 - 790095
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  790139 ttaaagttgtattggaaatgtaaagtgacattaattttgaaacaa 790095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 5244629 - 5244585
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| || |||| ||||||||| |||||||||||||||||||||    
T  5244629 ttaaagttatattaaaaatgtaaggtgacattcattttaaaacaa 5244585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 13485915 - 13485959
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  13485915 ttaaagttgtattggaaatgtaaattgacattcattttgaaacaa 13485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 51058260 - 51058304
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| || ||||||||  |||||||||||||||||||||||||    
T  51058260 ttaaaagtgcattgaaaacttaaagtgacattcattttaaaacaa 51058304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 52202401 - 52202445
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||| |||  |||||||||||||||||||    
T  52202401 ttaaagttgtattgaaaatgcaaaacgacattcattttaaaacaa 52202445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 8e-49; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 33584948 - 33585129
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| |||||||||||| |||||||||||||||||||||| || | | |||  |||||||||||||||   |||||||| ||||||||| ||||||||    
T  33584948 aaaatagtcaaatgtcataacaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagt 33585047  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||| |||||||||||||||    
T  33585048 tggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttaaaacaa 33585129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 33822476 - 33822650
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| |||||||| |||||||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| ||||||||| ||||||||    
T  33822476 aaaatagtcaaatgttatagcaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagt 33822575  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    || ||||||||||||||||||||||| |||       ||||| ||||||||||||||||||||||||||||||||    
T  33822576 tgaagtatttattgaaggtaaagttgaaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 33822650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 42329526 - 42329700
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||   |||||||| ||||||||| |||||||||| ||||    
T  42329526 tcaaatgtcatagcaattttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagta 42329625  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| | ||||||||||||||       ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  42329626 tttattaagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 42329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 793589 - 793760
Alignment:
Q  23 aatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtattt 119  Q
    |||||||||||||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| ||||||||| |||||||||  |||||||    
T  793589 aatgtcatagcaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtattt 793688  T
Q  120 attgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||| |||||||||       ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  793689 attgagggtagagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 793760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 34171334 - 34171163
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| | ||||||  ||||||||| |||||    
T  34171334 tcaaatgtcatagaaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattctgtgag--agaaaagtttgagta 34171237  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||||||||||||||    
T  34171236 tttattgaaggtaaagttggaa-aaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 34171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 29653487 - 29653661
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| ||||||||||||||||||||||||||||||| ||| || |||||||  |||||||||||||||   |||  ||| ||||||||| ||||||||    
T  29653487 aaaatagtcaaatgtcatagcaattttactaaaataacgttactttataagaacaagacaaacttaaagttgcattagaaattgtgtgagagagaaaagt 29653586  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    | ||||||||||||| ||||||||||||||       ||||| |||||||| ||||||||| |||||||||||||    
T  29653587 tagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcatttt 29653661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 27652294 - 27652419
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| |||||||||||| |||||||||||||||||||||| || |||||||  ||||||| |||||||   |||||||| ||||||||| ||||||||    
T  27652294 aaaatagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaagt 27652393  T
Q  110 tggagtatttattgaaggtaaagttg 135  Q
    |||| |||||||||| ||||||||||    
T  27652394 tggattatttattgagggtaaagttg 27652419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 4833620 - 4833787
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatt 118  Q
    |||||||||| |||||||||||||||||||||| || | ||     |||||||||||||||   |||||||| ||||||| | ||||||||| |||||||    
T  4833620 aaatgtcataacaattttactaaaataaccttacttaaaaa-----agacaaacttaaagttgcattgaaaattgtgtgaaagagaaaagtttgagtatt 4833714  T
Q  119 tattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| ||||||||||||||       ||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  4833715 tattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcaacattcattttgaaacaa 4833787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 166679 - 166803
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| ||||||||| |  |||||||||||||||||||| ||||||||||||||       ||||| |||||||| |||    
T  166679 agacaaacttaaagttgcattgaaaattgtgtgagaaa--aaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaa 166776  T
Q  165 tgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||||| ||||||    
T  166777 tgtaaagtgacattcattttgaaacaa 166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 36296107 - 36296217
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||| |||  |||||||||||||||   |||||||| ||||||||  ||||||||    
T  36296107 aaaataatcaaatgtaatagcaattttactaaaataaccttaatttataggaacaagacaaacttaaagttgcattgaaaattgtgtgagcgagaaaagt 36296206  T
Q  110 tggagtattta 120  Q
    |||||| ||||    
T  36296207 tggagtgttta 36296217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 36660515 - 36660426
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||| ||||||||||||||| ||||||||||||||       ||||| |||||||||||||||||||||||||||||||| ||||||    
T  36660515 agaaaagctggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36660426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 29044888 - 29044770
Alignment:
Q  23 aatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtattt 119  Q
    ||||||||| ||||||||||||||||| |||| || |||||||| ||| |||||||||||   |||||||| |||||| || ||||||||| ||| ||||    
T  29044888 aatgtcataacaattttactaaaataatcttactttataagaataagataaacttaaagttgcattgaaaattgtgtg-gagagaaaagtttgagcattt 29044790  T
Q  120 attgaaggtaaagttggaag 139  Q
    ||||| | ||||||||||||    
T  29044789 attgaggataaagttggaag 29044770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 38982175 - 38982299
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| |||| ||||  |||||||| ||||||||||||| ||||||||||| ||       ||||| |||||||| |||    
T  38982175 agacaaacttaaagttgcattgaaaattgtgcgaga--gaaaagtttgagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattggaaa 38982272  T
Q  165 tgtaaagtgacattcattttaaaacaa 191  Q
    | |||||||||||||||||||||||||    
T  38982273 tataaagtgacattcattttaaaacaa 38982299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 27810453 - 27810345
Alignment:
Q  81 gtattgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattca 180  Q
    |||||||||| ||||||||| |  |||||| ||||||||||||| | |||||||| |||       ||||| ||||||||||||||||||||||||||||    
T  27810453 gtattgaaaattgtgtgagaaa--aaagtttgagtatttattgaggataaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattca 27810356  T
Q  181 ttttaaaacaa 191  Q
    |||| ||||||    
T  27810355 ttttgaaacaa 27810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 13066801 - 13066712
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||| |||||||||||||        ||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  13066801 agaaaagttggagtatttattgagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 13066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 15400259 - 15400174
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaa 187  Q
    ||||||||| ||||||||||||| | ||||||||||||       ||||| |||||||| ||||||||||||||||||||||||||    
T  15400259 agaaaagtttgagtatttattgaggataaagttggaagaagaaaattaaagttgtattggaaatgtaaagtgacattcattttaaa 15400174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 102 - 188
Target Start/End: Complemental strand, 28640170 - 28640084
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||||||||| |||||||||||| ||||||||||| ||       ||||| ||| |||||||||||||||||||||| |||||||||    
T  28640170 agaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaagttgaattgaaaatgtaaagtgacatttattttaaaa 28640084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 32962990 - 32963106
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa--gtattgaaaactgtgtgagatagaaaagttggagtat 117  Q
    |||| |||||||||| ||||| ||||||||| ||| || |||||||  |||||||||||||  | |||| ||| ||| ||| | ||||||||| ||||||    
T  32962990 tcaattgtcatagcagttttattaaaataactttactttataagaaaaagacaaacttaaattgcattggaaattgtttgaaaaagaaaagttagagtat 32963089  T
Q  118 ttattgaaggtaaagtt 134  Q
    ||||||| |||||||||    
T  32963090 ttattgagggtaaagtt 32963106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 4371468 - 4371362
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    |||||||| |||||||||  |||||||| ||||||||||||| ||||||||| | ||       ||||| |||||||| |||||||||||||| ||||||    
T  4371468 attgaaaattgtgtgaga--gaaaagtttgagtatttattgagggtaaagtttggagaaaaaaattaaagttgtattggaaatgtaaagtgacgttcatt 4371371  T
Q  183 ttaaaacaa 191  Q
    || ||||||    
T  4371370 ttgaaacaa 4371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 7388291 - 7388335
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  7388291 ttaaaattgtattgaaaatataaagtgacattcattttaaaacaa 7388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 4742298 - 4742421
Alignment:
Q  70 acaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaat 165  Q
    |||||||||||||   |||||||| ||||||||| |  |||||||||||||||||||| ||||||||||||||        ||||| |||||||  ||||    
T  4742298 acaaacttaaagttgaattgaaaattgtgtgagaaa--aaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattagaaat 4742395  T
Q  166 gtaaagtgacattcattttaaaacaa 191  Q
     |||||||||||||||||| ||||||    
T  4742396 ataaagtgacattcattttgaaacaa 4742421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 4751562 - 4751685
Alignment:
Q  70 acaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaat 165  Q
    |||||||||||||   |||||||| ||||||||| |  |||||||||||||||||||| ||||||||||||||        ||||| |||||||  ||||    
T  4751562 acaaacttaaagttgaattgaaaattgtgtgagaaa--aaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattagaaat 4751659  T
Q  166 gtaaagtgacattcattttaaaacaa 191  Q
     |||||||||||||||||| ||||||    
T  4751660 ataaagtgacattcattttgaaacaa 4751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 31557411 - 31557489
Alignment:
Q  113 agtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||  ||||||||||||       ||||| |||||||||||||||||| ||||||||||||| ||||||    
T  31557411 agtatttattgaaaataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 31557489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 41845392 - 41845429
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41845392 ttaaaattgtattgaaaatgtaaagtgacattcatttt 41845429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 12167693 - 12167736
Alignment:
Q  148 taaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||| |||||||||||||||| ||||||||||||||||||||||    
T  12167693 taaagttgtattgaaaatgtagagtgacattcattttaaaacaa 12167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 17674315 - 17674207
Alignment:
Q  81 gtattgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattca 180  Q
    |||| ||||| |||||||||  ||||||||| |||||||||||| | ||||||| || |       ||||| || ||||||||| |||||||||||||||    
T  17674315 gtatagaaaattgtgtgaga--gaaaagttgaagtatttattgaggataaagttagacgtaaaaaattaaagttttattgaaaacgtaaagtgacattca 17674218  T
Q  181 ttttaaaacaa 191  Q
    |||| ||||||    
T  17674217 ttttgaaacaa 17674207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 39059891 - 39059805
Alignment:
Q  104 aaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||| |||||||||||||||| ||||||||| ||||       ||||| |||||||||||||||||||  ||||||||||| ||||||    
T  39059891 aaaatttggagtatttattgagggtaaagttagaagaaaaaa-ttaaagttgtattgaaaatgtaaagcaacattcattttgaaacaa 39059805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 7731703 - 7731747
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||| |||||||| |||||||||||||||||||||||||    
T  7731703 ttaaagttgttttgaaaatataaagtgacattcattttaaaacaa 7731747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 12992150 - 12992063
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||| | |||||||||||        ||||| |||||||  ||||||||| ||||||||||||| ||||||    
T  12992150 agaaaagttggagtatttattgaggataaagttggaa--aaaaaattaaagttgtattagaaatgtaaaatgacattcattttgaaacaa 12992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 14980149 - 14980193
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  14980149 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 14980193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 43257961 - 43258002
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    ||||| || ||||| |||||||||||||||||||||||||||    
T  43257961 ttaaagttatattggaaatgtaaagtgacattcattttaaaa 43258002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 4011746 - 4011790
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||| | |||||||||||||| |||||||||||||||    
T  4011746 ttaaagttgtatcggaaatgtaaagtgacgttcattttaaaacaa 4011790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 27658682 - 27658726
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| || ||||| ||||||||||||||||||||||| ||||||    
T  27658682 ttaaagttatattggaaatgtaaagtgacattcattttgaaacaa 27658726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 31889785 - 31889741
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  31889785 ttaaagttgtattggaaatgtaaagtgacatttattttgaaacaa 31889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 5e-47; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 31941727 - 31941553
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||  |||||||||||||||   |||||||| | ||||||| |||| ||||||||||    
T  31941727 tcaaatgtcatagcaattttattaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagta 31941628  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||    
T  31941627 tttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 31941553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 24259780 - 24259606
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||   ||||||||||||||   |||||||| ||||||||| |||||||||||||||    
T  24259780 tcaaatgtcataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagta 24259681  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||| |||| ||||||||||||||||||||||| ||||||    
T  24259680 tttattgagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 24259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 34124464 - 34124290
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||  | |||||||||||||   |||||||| ||||||||| ||||||||| |||||    
T  34124464 tcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagtttgagta 34124365  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||| ||||||||||||||| |||||||||||||||||||    
T  34124364 tttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttaaaacaa 34124290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 47321321 - 47321139
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| ||||||||||||||||||||||||||||||||||| || |||||||  |||||| ||||||||   |||||||| |||| |||  ||||||||    
T  47321321 aaaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagt 47321222  T
Q  110 tggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    | ||||||||||||| ||||||||||||||        ||||| |||||||||||||||||||||||||||||||||||||||    
T  47321221 tagagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 47321139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 17499693 - 17499874
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| |||||||||||| |||||||||||||||||| ||| || |||||||  |||||||||||||||   |||||||| ||| ||||| ||||||||    
T  17499693 aaaatagtcaaatgtcataacaattttactaaaataacattactttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagt 17499792  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    | ||||||||||||| ||||||||||||||       ||||||||| |||| |||||||||| |||||||||||| ||||||    
T  17499793 ttgagtatttattgagggtaaagttggaagaaaaaaattaaaattgcattggaaatgtaaagcgacattcattttgaaacaa 17499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 28116414 - 28116247
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||   | |||||| |||||| || ||||||||| |||||    
T  28116414 tcaaatgtcatagcaattttactaaaataaccttactttataagaataagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagta 28116315  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||||| | ||||||||||||||       ||||| |||||||| ||||||||||||||||| |||||    
T  28116314 tttattaagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttatttt 28116247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 45889732 - 45889559
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||| |||||||||||||||||||||||||| || |||||||  | |||||||||||||   |||||||| ||||||||| |||||||||||||||    
T  45889732 tcaaatgttatagcaattttactaaaataaccttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagta 45889633  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| |||||||| |||||       ||||| ||||||||||||||| ||| |||||||||||| ||||||    
T  45889632 tttattgagggtaaagtaggaagaaaaaagttaaagttgtattgaaaatgt-aagcgacattcattttgaaacaa 45889559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 19282393 - 19282567
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||| ||  |||||||||||||   |||||  ||| ||||||||| ||||||||| |||||    
T  19282393 tcaaatgtcataacaattttactaaaataaccttactttataa-aacaagacaaacttaaaattgtattagaaattgtgtgagagagaaaagttagagta 19282491  T
Q  117 tttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||||||||        ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  19282492 tttattgaaggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 19282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 55126666 - 55126494
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||   |  ||||| |||||  || ||||||||| |||||    
T  55126666 tcaaatgtcatagcaattttactaaaataaccttactttataagaataagacaaacttaaagttgcaaggaaaattgtgtaggagagaaaagttagagta 55126567  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaac 189  Q
    ||| || | |||| |||| ||||       ||||| ||||||||||||| |||| ||||||||||||||||||    
T  55126566 tttttttagggtagagttagaagagaaaaattaaagttgtattgaaaatttaaaatgacattcattttaaaac 55126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 51434240 - 51434414
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||| ||||| |||||||| ||||||||||||| || |||||||  |||| ||||| ||||   |||||||| ||||||||| |||||||||  ||||    
T  51434240 tcaaatttcataacaattttattaaaataaccttactttataagaaaaagactaactttaagttgcattgaaaattgtgtgagagagaaaagttaaagta 51434339  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||| ||||       ||||| ||| |||  |||||||||| |||||||||||||||||||    
T  51434340 tttattgagggtaaagtttgaaggaaaaaattaaagttgcattagaaatgtaaagcgacattcattttaaaacaa 51434414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 6462183 - 6462004
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatag--aaaagttggag 114  Q
    |||||| |||||||||||| ||||||||||||||| || |||||||  | |||||||||||||   |||||| | ||||||| ||||  ||||||| |||    
T  6462183 tcaaatttcatagcaatttgactaaaataaccttactttataagaacaaaacaaacttaaagttgcattgaatattgtgtgaaatagataaaagtttgag 6462084  T
Q  115 tatttatt---gaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||   || ||||||||||||||       ||||| |||||||| |||||||||| |||||||||||| ||||||    
T  6462083 tatttattgaggagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 6462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 19849201 - 19849079
Alignment:
Q  70 acaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatg 166  Q
    |||||||||||||   |||||||| |||||||||  |||||||||||||||||||||| ||||||||||||||       ||||| |||||||| || ||    
T  19849201 acaaacttaaagttgcattgaaaattgtgtgaga--gaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaattg 19849104  T
Q  167 taaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||||    
T  19849103 taaagtgaaattcattttaaaacaa 19849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 4408160 - 4408335
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||| ||||||| |||||||||||||||||||||| |  |||||||  |||||||||||||   | |||||||| ||||||||| ||||||||| ||| |    
T  4408160 tcaagtgtcataacaattttactaaaataaccttactatataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagagaaaagtttgagca 4408259  T
Q  117 tttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| | |||||| |||||        ||||| ||| ||||| ||||||||| |||||||||||| ||||||    
T  4408260 tttattgaggttaaagtcggaagaagaaaaattaaagttgcattgagaatgtaaagcgacattcattttgaaacaa 4408335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 188
Target Start/End: Complemental strand, 31987388 - 31987302
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    ||||||||||||||||||||||| ||||||||||||||       ||||| |||||||  |||||||||||||||||||||||||||    
T  31987388 agaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttaaaa 31987302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 22212444 - 22212314
Alignment:
Q  81 gtattgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattca 180  Q
    |||||||||| ||||||||| |  || ||||||||||||||||| ||||||||||||||       ||||| || ||||| |||||||| ||||||||||    
T  22212444 gtattgaaaattgtgtgagaaa--aatgttggagtatttattgagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaggtgacattca 22212347  T
Q  181 ttttaaaacaannnnnnnggctaaagcgacatt 213  Q
    |||||||||||       |||||||||||||||    
T  22212346 ttttaaaacaatttttttggctaaagcgacatt 22212314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 30492812 - 30492732
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    ||||||||||||||||||||||| ||||||||||| ||       ||||| ||||||||||||||||||||||||||||||    
T  30492812 agaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 30022196 - 30022063
Alignment:
Q  59 ataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattg 155  Q
    |||||||  ||||||||| |||||   |||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||||       ||||| |||    
T  30022196 ataagaaaaagacaaactcaaagttgcattgaaaattgtgtgaga--gaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttg 30022099  T
Q  156 tattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||| |||| ||||||||||| ||||||    
T  30022098 tattggaaatgtcaagtaacattcattttgaaacaa 30022063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 29840160 - 29840070
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn-ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||| ||||||||||| ||        ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  29840160 agaaaagttggagtatttattgagggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29840070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 45520482 - 45520611
Alignment:
Q  59 ataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattg 155  Q
    |||||||| |||||||||||||||   ||| |||| ||| |||||  |||||||| ||||||||||  | | ||||||||||||       ||||| |||    
T  45520482 ataagaataagacaaacttaaagttgcattaaaaattgtatgaga--gaaaagtttgagtatttatcaaggataaagttggaagaaaaaa-ttaaagttg 45520578  T
Q  156 tattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||||||||||||||||||||||||||||||||    
T  45520579 tattgaaaatgtaaagtgacattcattttaaaa 45520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 35928575 - 35928486
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||| |||||||||||| ||||||||||||||       ||||| |||||||||||||||||||||| ||| ||||| ||||||    
T  35928575 agaaacgttgcagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatatttattttgaaacaa 35928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 37445744 - 37445655
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| || || |||||||||| ||||||||||||||       ||||| ||||||| |||||||||| ||||||||||||||||||||    
T  37445744 agaaaaatttgaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 37445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 54092042 - 54091953
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||| ||||||||||  ||       ||||| ||||||| ||||| |||| ||||||||||||||||||||    
T  54092042 agaaaagttggagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattaaaaatctaaattgacattcattttaaaacaa 54091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 54233985 - 54233902
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgaga 100  Q
    |||||| ||||| ||||||||||||||||| |||| || |||||||  |||||||||||||||   |||||||| |||||||||    
T  54233985 tcaaatatcatatcaattttactaaaataagcttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 54233902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 6510202 - 6510113
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||| ||||||||||||||| ||||||||||  ||       ||||| ||||||||||||| |||||||||||| ||||| ||||||    
T  6510202 agaaaaggtggagtatttattgagggtaaagttgagagaaaaaagttaaagttgtattgaaaatataaagtgacatttattttgaaacaa 6510113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 17317893 - 17317999
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcat 181  Q
    |||||||| |||||||||||  |||||| |||||||||||||||||||||||| |||        ||||| |||||||| |||||||| ||||||||||     
T  17317893 attgaaaattgtgtgagata--aaagtttgagtatttattgaaggtaaagttgaaagaaaaaaaattaaagttgtattggaaatgtaatgtgacattcag 17317990  T
Q  182 tttaaaaca 190  Q
    ||| |||||    
T  17317991 tttgaaaca 17317999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 21045195 - 21045151
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  21045195 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 21045151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 50072320 - 50072276
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  50072320 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 50072276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 52732638 - 52732594
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  52732638 ttaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 52732594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 34534073 - 34534108
Alignment:
Q  17 taatcaaatgtcatagcaattttactaaaataacct 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  34534073 taatcaaatgtcatagcaattttactaaaataacct 34534108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 38692443 - 38692409
Alignment:
Q  157 attgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||||||||||||||||||||    
T  38692443 attgaaaatgtaaagtgacattcattttaaaacaa 38692409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 34096167 - 34096067
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| |  ||||| || |||||||  |||||||||||||||   |||||||| ||||||||  ||||||||| || |||||||||| |||||||    
T  34096167 ttttactaaattgcccttactttataagaaaaagacaaacttaaagtttcattgaaaattgtgtgag--agaaaagtttgaatatttattgagggtaaag 34096070  T
Q  133 ttg 135  Q
    |||    
T  34096069 ttg 34096067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 45903518 - 45903555
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  45903518 ttaaagttgtattgaaaatgtaaagtgacattcatttt 45903555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 1868211 - 1868255
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  1868211 ttaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 1868255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 3093383 - 3093351
Alignment:
Q  156 tattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||||||||||||||||||||||||||||||||    
T  3093383 tattgaaaatgtaaagtgacattcattttaaaa 3093351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 15501258 - 15501302
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  15501258 ttaaagttgtattggaaatgtaaagtgacattcattttcaaacaa 15501302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 51930639 - 51930595
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||    
T  51930639 ttaaaattgtattggaaatgtaaagcgacattcattttgaaacaa 51930595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 56556366 - 56556410
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  56556366 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 56556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 11835181 - 11835109
Alignment:
Q  112 gagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||||||||||||||||||| ||| |||       ||||| || |||| ||||||||||||||||||||||||    
T  11835181 gagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaaaaatgtaaagtgacattcatttt 11835109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 45049748 - 45049707
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||||||| |||| |||||||||||||||||| |||||||||    
T  45049748 ttaaaattatattaaaaatgtaaagtgacattaattttaaaa 45049707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 6232147 - 6232191
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||| ||||||| ||||| ||||||    
T  6232147 ttaaagttgtattgaaaatgtaaattgacatttattttgaaacaa 6232191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 32141075 - 32141119
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| |||||||||||| |||||||||| ||||||    
T  32141075 ttaaagttgtattggaaatgtaaagtggcattcattttgaaacaa 32141119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 36447051 - 36447225
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||| |||||| ||||||||   |||||||| ||||||||| |||||||||||||||    
T  36447051 tcaaatgtcatagcaattttactaaaataacattactttataagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagta 36447150  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||| ||| | ||||||||||||       |||||||||||||||||||||||| ||||||||||||| ||||||    
T  36447151 tttaatgaggataaagttggaagagaaaaattaaaattgtattgaaaatgtaaaatgacattcattttgaaacaa 36447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 32345816 - 32345990
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||  | |||||||||||||   |||||||| ||||||||| |||||||||||||||    
T  32345816 tcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagta 32345915  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  32345916 tttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 32345990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 31416729 - 31416906
Alignment:
Q  17 taatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttgga 113  Q
    ||||||||||||| | ||||||||||||||||| |||| || |||||||  ||||||| |||||||   |||||||| ||||||||| |||||| ||| |    
T  31416729 taatcaaatgtcaaaacaattttactaaaataatcttattttataagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaa 31416828  T
Q  114 gtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||| ||||||||||||||       ||||| |||||||||||||||||||||| ||||||||||||||||    
T  31416829 gtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatattcattttaaaacaa 31416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 39117470 - 39117636
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||   |||||||| ||||||||| |||||| ||||||||    
T  39117470 tcaaatgtcataacaattttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaa-ttggagta 39117568  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    || ||||| ||||| ||||||||       ||||| ||||||||||||||||||  ||||||||||||    
T  39117569 ttcattgagggtaatgttggaagaaaataattaaagttgtattgaaaatgtaaaacgacattcatttt 39117636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 19906592 - 19906413
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||| |||  |||||||||||||||   ||||||||   ||||||| ||||||||    
T  19906592 aaaatagtcaaatgtcatagcaattttactaaaataaccttactttataggaacaagacaaacttaaagttgcattgaaaa--ttgtgagagagaaaagt 19906495  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||| |||||||||| ||||||||||||||       | ||| |||||||| |||||||||| |||||||||||| ||||||    
T  19906494 tggaatatttattgagggtaaagttggaagaaaaaaataaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 19906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 26963659 - 26963478
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| |||||||||||| |||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| | ||||||| ||||||||    
T  26963659 aaaatagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagt 26963560  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||| ||||| ||||||||||||||       ||||| ||| |||| |||||||||  |||||| ||||| ||||||    
T  26963559 tggagtattcattgagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaatagacatttattttgaaacaa 26963478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 30515153 - 30514972
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| || ||||| |||| ||||||| ||||||||||||| ||  ||||||| ||||||| |||||||   ||| |||| ||| ||||| | ||||||    
T  30515153 aaaatagtcgaatgttatagtaattttattaaaataaccttactttttaagaataagacaaatttaaagttgtatttaaaattgtctgagagaaaaaagt 30515054  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||||||||||       ||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  30515053 tggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaa 30514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 6521990 - 6521817
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| ||||| |||||||||||||||| || |||||||  |||||||||||||   |||||||||| ||||||||| ||  || || |||||    
T  6521990 tcaaatgtcataacaattatactaaaataaccttactttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgagagagggaaatttgagta 6521891  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||| |||       || |||||| ||||||||||||||| || ||||||||||||||||    
T  6521890 tttattgaaggtaaagttgaaagaaaaaattt-aaattgcattgaaaatgtaaagcgatattcattttaaaacaa 6521817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 10684804 - 10684985
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| | |||| ||||| |||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| ||||||||| ||||||||    
T  10684804 aaaatagttaaatatcataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgagagagaaaagt 10684903  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |  | |||||||| | ||||||||||||||       ||||| ||| |||||||||||||||   |||||||||| ||||||    
T  10684904 tttaatatttattaagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcagcattcattttgaaacaa 10684985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 40298970 - 40298846
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| |||||||||  |||||||||||||||||||||| ||||||||||| ||       ||||| ||||||||||||    
T  40298970 agacaaacttaaagttacattgaaaattgtgtgaga--gaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaa 40298873  T
Q  165 tgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||||| ||||||    
T  40298872 tgtaaagtgacattcattttgaaacaa 40298846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 42044026 - 42044127
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||||||||||||| |||    
T  42044026 attgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattaatt 42044125  T
Q  183 tt 184  Q
    ||    
T  42044126 tt 42044127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 36836231 - 36836058
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||| |||||| |||||||||||||||||| ||| || |||  ||  ||||||| |||||||   |||||||| | ||||||| |||||| |||||||     
T  36836231 tcaaacgtcatatcaattttactaaaataacattactttatagaaacaagacaaatttaaagttgcattgaaaattatgtgagagagaaaaattggagtg 36836132  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||| ||| ||||||||||||||       ||||| ||||||||||||||||||| |||||||||||| ||||||    
T  36836131 tttactga-ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcattttgaaacaa 36836058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 34002154 - 34002277
Alignment:
Q  59 ataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattg 155  Q
    |||||||  ||||||| |||||||   |||||||| |||||||||  |||||||||||||||||||||| ||||||||||||||       ||||| |||    
T  34002154 ataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttggagtatttattgagggtaaagttggaagaataaaattaaacttg 34002251  T
Q  156 tattgaaaatgtaaagtgacattcat 181  Q
    ||||| ||||||||||||||||||||    
T  34002252 tattggaaatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 1103589 - 1103483
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    |||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||||       ||||| |||||||| ||||||||| |||||||||||    
T  1103589 attgaaaattgtgtgaga--gaaaagttgaagtatttattgagggtaaagttggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcatt 1103492  T
Q  183 ttaaaacaa 191  Q
    || ||||||    
T  1103491 ttgaaacaa 1103483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 3680988 - 3681077
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||| | ||||||||| | ||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||    
T  3680988 agaaaagttagtgtatttattaatggtaaagttggaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 3681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 41905933 - 41906088
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| |  ||||| || |||||||  ||||||| |||||||   |||||||| ||||| |||  |||||||||||||||||||||| |||||||    
T  41905933 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtaaga--gaaaagttggagtatttattga-ggtaaag 41906029  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||       ||||| |||||||  ||||||||||||||||| ||||||||||||    
T  41906030 ttggaagagaaaacttaaagttgtattagaaatgtaaagtgacatttattttaaaacaa 41906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 5723125 - 5723009
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| |||||||||  |||||||| ||||||||||||| ||||||||| | ||       ||||| ||||||||||||    
T  5723125 agacaaacttaaagttgcattgaaaattgtgtgaga--gaaaagtttgagtatttattgagggtaaagttaggagaaaaaa-ttaaagttgtattgaaaa 5723029  T
Q  165 tgtaaagtgacattcatttt 184  Q
    ||||||||||||||||||||    
T  5723028 tgtaaagtgacattcatttt 5723009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 19288403 - 19288495
Alignment:
Q  92 tgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||| ||||       ||||| |||||||  |||||||||||||||||||||||    
T  19288403 tgtgtgagagagaaaagttggagaatttattgagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 19288495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 30833161 - 30833245
Alignment:
Q  104 aaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||||||||||||||||||||||||||||||| |||       | ||| |||||||||||||||||| ||| |||||||||||||    
T  30833161 aaaagttggagtatttattgaaggtaaagttgaaagaaaaaaataaaagttgtattgaaaatgtaaaatgatattcattttaaaa 30833245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 42259547 - 42259702
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    ||||||||||||  ||||| || |||||||  |||||| ||||||||   |||||||| | ||||||| |  |||||| ||||||||||||| |||||||    
T  42259547 ttttactaaaatgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgtgagaca--aaagtttgagtatttattgagggtaaag 42259644  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||       ||||| |||||||||||| ||||| | ||||||||||||||||||    
T  42259645 ttggaag-aaaaaattaaagttgtattgaaaacgtaaaataacattcattttaaaacaa 42259702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 19920337 - 19920423
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    ||||||||| ||||||||||||| ||||||||||  ||       ||||| |||||||| |||||||||||||||||||||||||||    
T  19920337 agaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaa 19920423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 26527462 - 26527548
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    ||||||||||||||||||||||| | ||||||| ||||       ||||| |||||||||||||||||| | |||||||||||||||    
T  26527462 agaaaagttggagtatttattgaggttaaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaataacattcattttaaaa 26527548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 28044242 - 28044286
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  28044242 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 28044286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 17869358 - 17869236
Alignment:
Q  70 acaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatg 166  Q
    |||||||||||||   |||||||| |||||||||  |||||| | ||||||||||||| | ||||||||||||       ||||| ||| |||| |||||    
T  17869358 acaaacttaaagttgcattgaaaattgtgtgaga--gaaaagattgagtatttattgaggataaagttggaaggaaaaaattaaagttgcattggaaatg 17869261  T
Q  167 taaagtgacattcattttaaaacaa 191  Q
    |||| ||||||||||||| ||||||    
T  17869260 taaaatgacattcattttgaaacaa 17869236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 18733496 - 18733452
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  18733496 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 18733452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 18886712 - 18886668
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  18886712 ttaaagttgtattgaaaatgtaaagtgagattcattttaaaacaa 18886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 22597273 - 22597229
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  22597273 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 22597229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 32873274 - 32873318
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||| |||| |||||||||||||||||||||||||    
T  32873274 ttaaaattgtattggaaatataaagtgacattcattttaaaacaa 32873318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 36447712 - 36447756
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||    
T  36447712 ttaaagttgtattgaaaatataaagtgatattcattttaaaacaa 36447756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 43813455 - 43813499
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||    
T  43813455 ttaaagttgtattggaaatataaagtgacattcattttaaaacaa 43813499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 34733464 - 34733362
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| || ||||| || |||||||  |||||||||||||||   |||||||| |||    || |||||| ||||||||||||||||||| | ||    
T  34733464 ttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgt----gagagaaaaattggagtatttattgaagggagag 34733369  T
Q  133 ttggaag 139  Q
    |||||||    
T  34733368 ttggaag 34733362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 22627457 - 22627494
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  22627457 ttaaagttgtattggaaatgtaaagtgacattcatttt 22627494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 40805067 - 40805026
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    ||||| |||||||| ||||||||||||||||| |||||||||    
T  40805067 ttaaagttgtattgtaaatgtaaagtgacatttattttaaaa 40805026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 29001548 - 29001642
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttgga 113  Q
    |||| |||||| ||||||| |||||||| |||| || ||| |||  | |||||||||||||   |||||||| ||||||||| | ||||||||||    
T  29001548 aaatatcatagaaattttaataaaataatcttattttataggaacaaaacaaacttaaagttgcattgaaaattgtgtgagaaataaaagttgga 29001642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 42121593 - 42121549
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| |||| |||||||||||||||||| ||||||    
T  42121593 ttaaagttgtattggaaatataaagtgacattcattttgaaacaa 42121549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 8e-43; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 17345119 - 17345290
Alignment:
Q  23 aatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtattt 119  Q
    |||||||||||||||||||||||||||||||| || |||||||  |||||||||| ||||   |||||||| ||||||||| ||||||||||||||||||    
T  17345119 aatgtcatagcaattttactaaaataaccttactttataagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtattt 17345218  T
Q  120 attgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||||||||||||||       ||||| |||||||  ||||||||||||| ||||||||||||||||    
T  17345219 attgagggtaaagttggaagaaaaatattaaagttgtattagaaatgtaaagtgatattcattttaaaacaa 17345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 34576712 - 34576542
Alignment:
Q  24 atgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtattta 120  Q
    |||||||| |||||||||||||||||| ||| || | |||||  |||||||||||||||   |||||||| ||||||||| |||||||||| ||||||||    
T  34576712 atgtcataacaattttactaaaataactttactttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtattta 34576613  T
Q  121 ttgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||| | ||||||||||||       ||||| |||||||| ||||||||| ||| ||||||||||||||||    
T  34576612 ttgaggataaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 34576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 191
Target Start/End: Complemental strand, 25932799 - 25932626
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatt 118  Q
    ||||||||||||||||||||||||||||||||| || |||  ||  |||||||||||||||   |||||||| ||||||||| | ||||||| |||||||    
T  25932799 aaatgtcatagcaattttactaaaataaccttactttatagcaacaagacaaacttaaagttacattgaaaattgtgtgagagaaaaaagtttgagtatt 25932700  T
Q  119 tattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| | ||||||| ||||        ||||| ||| |||||||||||||||  ||||||||| ||||||||    
T  25932699 tattgaggataaagttagaagaaaaaaaattaaagttgcattgaaaatgtaaagccacattcattataaaacaa 25932626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 191
Target Start/End: Complemental strand, 26189679 - 26189506
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattaga-caaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtat 117  Q
    |||||||||||||||| |||||||||||||||| || |||||||  | | ||||||||||||   |||||||| |||||| || |||||| |||||||||    
T  26189679 aaatgtcatagcaattatactaaaataaccttactttataagaaaaaaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtat 26189580  T
Q  118 ttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||| ||||||||||||||       ||||| ||| |||| |||||||||   ||||||||||| ||||||    
T  26189579 ttattgagggtaaagttggaagaaaaatattaaagttgcattggaaatgtaaaacaacattcattttgaaacaa 26189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 29927362 - 29927205
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    ||||||||| ||| ||||| || |||||||  |||||||||||||||   ||||||||||   |||||  |||||||||||||||||||||| |||||||    
T  29927362 ttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattgaaaactacatgaga--gaaaagttggagtatttattgagggtaaag 29927265  T
Q  133 ttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||        ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  29927264 ttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29927205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 12828679 - 12828835
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| |  ||||| || |||||||  |||||| ||||||||   |||||||| |||||||||  ||||||||| |||||||||||| |||||||    
T  12828679 ttttactaaactgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgtgaga--gaaaagttgaagtatttattgagggtaaag 12828776  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||       ||||| |||||||| ||||||||||||| ||||||||| ||||||    
T  12828777 ttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcattttgaaacaa 12828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 4132042 - 4132129
Alignment:
Q  104 aaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||| |||||||||| |||       ||||| ||||||| |||||||||||||||||||||||||||||||    
T  4132042 aaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 4132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 31275671 - 31275796
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaa 163  Q
    |||||||||||||||   |||||||| ||||||||| |  |||||||||||||||||||| ||||||||||||||        ||||| |||||||| ||    
T  31275671 agacaaacttaaagttgcattgaaaattgtgtgagaaa--aaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaa 31275768  T
Q  164 atgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||| ||||||    
T  31275769 atgtaaagtgacattcattttgaaacaa 31275796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 4123920 - 4124009
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||| |||||||||| |||       ||||| ||||||| |||||||||||||||||||||||| ||||||    
T  4123920 agaaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttgaaacaa 4124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 6140705 - 6140598
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    |||||||| ||||| ||| |||||||||  |||||||||||||||||||||||||||       ||||| ||| |||| |||||||||| ||||||||||    
T  6140705 attgaaaattgtgtaagagagaaaagtttaagtatttattgaaggtaaagttggaag-aaaaaattaaagttgaattggaaatgtaaagcgacattcatt 6140607  T
Q  183 ttaaaacaa 191  Q
    |||||||||    
T  6140606 ttaaaacaa 6140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 29915673 - 29915539
Alignment:
Q  59 ataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaatt 154  Q
    |||||||  |||||||| ||||||   |||| ||| |||||||||  |||||||||||||||||||||| ||||||||||||||        ||||| ||    
T  29915673 ataagaaaaagacaaacataaagttgcattggaaattgtgtgaga--gaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagtt 29915576  T
Q  155 gtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  29915575 gtattggaaatgtaaagtgacattcattttgaaacaa 29915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 32258828 - 32258720
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggt-aaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcat 181  Q
    |||||||| ||||||||| | |||||||||||||||| ||  |||| |||||||||||       ||||| |||||||||||||||||||||||||||||    
T  32258828 attgaaaattgtgtgagaga-aaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcat 32258730  T
Q  182 tttaaaacaa 191  Q
    ||| ||||||    
T  32258729 tttgaaacaa 32258720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 191
Target Start/End: Complemental strand, 6143186 - 6143082
Alignment:
Q  87 aaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaa 186  Q
    |||| ||||| ||| | |||||||  |||||||||||||||||||||||||||       ||||| ||| |||| ||||||||| |||||||||||||||    
T  6143186 aaaattgtgtaagagaaaaaagtttaagtatttattgaaggtaaagttggaagaaaaaaattaaagttgaattggaaatgtaaaatgacattcattttaa 6143087  T
Q  187 aacaa 191  Q
    |||||    
T  6143086 aacaa 6143082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 34439479 - 34439567
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||| |||||||||||||||||||||       | ||| |||||||| ||||||||| ||||||||||||| ||||||    
T  34439479 agaaaagttggagtatatattgaaggtaaagttggaag-aaagaatgaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 34439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 6992580 - 6992511
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt 82  Q
    |||||| |||||  |||||| ||||||||||||||||||||| || |||||||  |||||||||||||||    
T  6992580 aaaatagtcaaacatcatagtaattttactaaaataaccttactttataagaaaaagacaaacttaaagt 6992511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 11785149 - 11785255
Alignment:
Q  81 gtattgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattca 180  Q
    |||||||||| |||||||||  |||||||| || |||||||||| ||||||||||||||       ||||| |||||||| ||||||||||||||| |||    
T  11785149 gtattgaaaattgtgtgaga--gaaaagttagaatatttattgagggtaaagttggaag-aaaaaattaaagttgtattggaaatgtaaagtgaca-tca 11785244  T
Q  181 ttttaaaacaa 191  Q
    |||| ||||||    
T  11785245 ttttgaaacaa 11785255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 1924774 - 1924818
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  1924774 ttaaagttgtattgaaaatgtaaaatgacattcattttaaaacaa 1924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 30627178 - 30627089
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||| ||||||||||||| ||||||||||  ||       ||||| ||||||||||||| |||||||||||| ||||| ||||||    
T  30627178 agaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaa 30627089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 3015958 - 3015921
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  3015958 ttaaagttgtattgaaaatgtaaagtgacattcatttt 3015921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 8052431 - 8052343
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||| |||||||||||||||||| |||||| |||| ||       ||||| |||||||  |||| |||||||||||||||||||||||||    
T  8052431 agaatagttggagtatttattgagggtaaaattgggagaaaaaa-ttaaagttgtattagaaatataaagtgacattcattttaaaacaa 8052343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 10494872 - 10494916
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||| |||| ||||||||| ||||||||||||||||||||    
T  10494872 ttaaagttgaattggaaatgtaaactgacattcattttaaaacaa 10494916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 70435 - 70609
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||  |||||||||||||||||||||| || |||||||  | |||||||||||||   |||||||| ||||||||| |||||||||||||||    
T  70435 tcaaatgtcatgacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagta 70534  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  70535 tttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 70609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 3e-42; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 2459945 - 2459771
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||| |||||||||||||||||||| ||||||| || ||||||||  ||||||||||||||   |||||||| ||||||||| |||||||||||||||    
T  2459945 tcaaatatcatagcaattttactaaaacaaccttattttataagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagta 2459846  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||| |||| |||||||||| |||||||||||||||||||    
T  2459845 tttattgagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttaaaacaa 2459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 41984597 - 41984416
Alignment:
Q  14 aaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagac-aaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||||||| |||| |||||||||||   |||||||| |||||| || ||||||||    
T  41984597 aaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagt 41984498  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||| ||||||||||||||||       ||||| ||||||||||||||||||| || ||| ||||| ||||||    
T  41984497 tggagtatttattaaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgatatttattttgaaacaa 41984416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 39866653 - 39866824
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||||||| || | |||||   ||||||||||||   |||||||||| ||||||||| | |||| || |||||    
T  39866653 tcaaatgtcatagcaattttactaaaataaccttactttacaagaaaatgacaaacttaaagttgtattgaaaattgtgtgagagaaaaaaatttgagta 39866752  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||||||||||||||||||||||       ||||| ||| |||| |||||||||| ||||||||||||||||    
T  39866753 tttattgaaggtaaagttggaagaaaaaaattaaatttgcattggaaatgtaaagcgacattcattttaaaa 39866824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 10580831 - 10581012
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| |||||| |||| ||||||||| |||||||| |||| || |||||||  |||||| ||||||||   |||||||| ||||||||| ||||||||    
T  10580831 aaaatagtcaaatatcatcgcaattttattaaaataatcttactttataagaacaagacaatcttaaagttgtattgaaaattgtgtgagagagaaaagt 10580930  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    | ||||||||||||| ||||||||||||||       ||||| ||||||||||||| |||||||| ||||||||| ||||||    
T  10580931 ttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttgaaacaa 10581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 43388639 - 43388811
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||  | |||||||||||   |||||||||| | ||||||  ||||||||| |||||    
T  43388639 tcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattatgtgag--agaaaagtttgagta 43388736  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  43388737 tttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 43388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 775866 - 776039
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| |||||| ||  |||||||| |||||    
T  775866 tcaaatgtcataacaattttactaaaataaccttaatttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgggagggaaaagttagagta 775965  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||| ||||       ||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  775966 tttattgagggtaaagttagaag-aaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 191
Target Start/End: Complemental strand, 33093537 - 33093366
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatt 118  Q
    |||||||||| ||||||||||||| |||||||| || |||| |   ||| |||||||||||   |||||||| ||||||||  |||||||||||| ||||    
T  33093537 aaatgtcataacaattttactaaa-taaccttactttataacatcaagataaacttaaagttgcattgaaaattgtgtgagggagaaaagttggaatatt 33093439  T
Q  119 tattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| ||||||||||||||       ||||| |||||||||||||||||||||||||||||||| ||||||    
T  33093438 tattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 33093366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 25332742 - 25332620
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||| |   |||||||||| ||| ||||| |||||||||||||||    
T  25332742 tcaaatgtcatagcaattttactaaaataaccttactttataagaaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagta 25332643  T
Q  117 tttattgaaggtaaagttggaag 139  Q
    |||||||| | ||||||||||||    
T  25332642 tttattgaggataaagttggaag 25332620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 4566096 - 4566274
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| |||||| ||||| |||||||||||||||||||||| || |||||||  ||| ||| |||||||   |||||||| ||||||||| ||||||||    
T  4566096 aaaatagtcaaatatcataacaattttactaaaataaccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgtgagagagaaaagt 4566195  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||| | |||||||| | |||||||| ||        ||||| ||||||| |||||||||||||||||  |||||||||    
T  4566196 tggactctttattgatgataaagttgaaaaaaaaaaattaaagttgtattaaaaatgtaaagtgacatatattttaaaa 4566274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 7743541 - 7743401
Alignment:
Q  50 ccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn 146  Q
    ||||| || |||||||  ||||||| |||||||   |||||||| |||||||||  ||||||||||| |||||||||| ||||||||||||||           
T  7743541 ccttactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgaga--gaaaagttggactatttattgagggtaaagttggaagaaaaaga 7743444  T
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaac 189  Q
    ||||| |||||||| ||||||||||||||||||||||||||||    
T  7743443 ttaaagttgtattggaaatgtaaagtgacattcattttaaaac 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 24775343 - 24775187
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    ||||||||||||   |||| || |||||||  | |||||||||||||   |||||||| |||||||||  ||||||||| |||||||||||| ||||||     
T  24775343 ttttactaaaatgctcttactttataagaaaaaaacaaacttaaagttatattgaaaattgtgtgaga--gaaaagttgaagtatttattgagggtaaac 24775246  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||| ||       |||||||||||||||||||||||||||||| ||||||||||||||    
T  24775245 ttgggagaaaaaaattaaaattgtattgaaaatgtaaagtgacaatcattttaaaacaa 24775187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 14698160 - 14698064
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttgga 113  Q
    ||||||||||||||||||||||||||||||||||| || |||||||  | |||||||||||   |||||||||| ||||||||| ||||||||||||    
T  14698160 tcaaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttgga 14698064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 4840725 - 4840874
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| |  ||||| || |||||||  ||||||| |||||||   ||||||||||||||| ||  |||||||| ||||||||||||| |||||||    
T  4840725 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaactgtgtggga--gaaaagtttgagtatttattgagggtaaag 4840822  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||||||       ||||| |||||||| |||||||||||||||||||||||    
T  4840823 ttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 4840874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 18374831 - 18374918
Alignment:
Q  104 aaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||| ||||||||||||| ||||||||||||||       |||||||| ||||| ||||||||||||||||||||||| ||||||    
T  18374831 aaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaaattatattggaaatgtaaagtgacattcattttcaaacaa 18374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 16316840 - 16316718
Alignment:
Q  59 ataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattg 155  Q
    |||||||  ||||||| |||||||   |||||||| |||||||||||  ||||||||| ||||||||||| ||||| |||||||       ||||| |||    
T  16316840 ataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagata--aaagttggaatatttattgaaagtaaatttggaagaaaaaaattaaagttg 16316743  T
Q  156 tattgaaaatgtaaagtgacattca 180  Q
    ||||| |||| ||||||||||||||    
T  16316742 tattggaaatataaagtgacattca 16316718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 45372648 - 45372686
Alignment:
Q  153 ttgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45372648 ttgtattgaaaatgtaaagtgacattcattttaaaacaa 45372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 4536658 - 4536572
Alignment:
Q  105 aaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| |||||||| |||| ||||||||||| ||       ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  4536658 aaagttagagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 4536572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 14378334 - 14378375
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  14378334 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaa 14378375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 43344269 - 43344375
Alignment:
Q  81 gtattgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattca 180  Q
    |||||||||| | |||||||  ||||| || ||||||||||| ||||||||||||||||       ||||| ||||||||||||| ||| ||||||||||    
T  43344269 gtattgaaaattatgtgaga--gaaaaattagagtatttattaaaggtaaagttggaagaaaaa--ttaaagttgtattgaaaatataaggtgacattca 43344364  T
Q  181 ttttaaaacaa 191  Q
    |||| ||||||    
T  43344365 ttttgaaacaa 43344375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 1360264 - 1360175
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||| |||||||||||| |||||| |||| ||       ||||| |||||||| ||||| ||||||||||||||||| ||||||    
T  1360264 agaaaagttgaagtatttattgagggtaaaattgggagaaaaaaattaaagttgtattggaaatgcaaagtgacattcattttgaaacaa 1360175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 34225815 - 34225771
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  34225815 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 34225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 45148062 - 45148106
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  45148062 ttaaagttttattgaaaatgtaaagtgacattcattttaaaacaa 45148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 36360373 - 36360520
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| |  ||||| || |||||||  ||| |||||||||||   |||||||| |||||||||    |||||| |||||| |||||| |||||||    
T  36360373 ttttactaaactgcccttattttataagaaaaagataaacttaaagttgtattgaaaattgtgtgaga----aaagtttgagtatatattgagggtaaag 36360468  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||| |||       ||||| |||||||||||||| ||||||| |||||||||    
T  36360469 ttgaaagaaaaaaattaaagttgtattgaaaatgcaaagtgatattcatttt 36360520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 37106966 - 37106886
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaat 165  Q
    |||||||| |||||||||  |||||||||||||||||||| | ||||||||||||||       ||||| |||||||||||||    
T  37106966 attgaaaattgtgtgaga--gaaaagttggagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattgaaaat 37106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 29795300 - 29795344
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  29795300 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29795344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 4766298 - 4766341
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaaca 190  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||    
T  4766298 ttaaagttgtattgaaaatgtaaattgacattcattttgaaaca 4766341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 38809869 - 38809835
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataacctta 54  Q
    ||||||||||||||||||||||||||||| |||||    
T  38809869 tcaaatgtcatagcaattttactaaaatagcctta 38809835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 40987381 - 40987419
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttta 185  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  40987381 ttaaagttgtattgaaaatgtaaagcgacattcatttta 40987419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 6592053 - 6591963
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn-ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||| |||||| | |||||||| ||        ||||| |||||||| ||||||||| ||| ||||||||||||||||    
T  6592053 agaaaagttggagtattcattgaaaggaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 6591963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 43460879 - 43460792
Alignment:
Q  81 gtattgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaa 170  Q
    |||||||||| | |||||||  ||||||||| |||||||||||| ||||| ||||||||       ||||| |||||||| |||||||||    
T  43460879 gtattgaaaattatgtgaga--gaaaagttgaagtatttattgagggtaacgttggaagagaaaacttaaagttgtattggaaatgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 14698054 - 14698010
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  14698054 ttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 14698010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 44582760 - 44582927
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| ||||||||||||||||| |||| || |||||||  |||||||||||||||   |||||||| | |||||||||||||||||||||||    
T  44582760 tcaaatgtcataacaattttactaaaataatcttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagta 44582859  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||||||| ||||||||||||||       ||||| |||||||| ||||||||||||||||| |||||    
T  44582860 tttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttatttt 44582927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 26252290 - 26252116
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| ||||||||| | ||||||| |||||    
T  26252290 tcaaatgtcattgcaattttactaaaataaccttattttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagta 26252191  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| | ||||||||||||||       || || |||||||| ||||||||||||||||||||||| ||||||    
T  26252190 tttattaagggtaaagttggaagaaaaaaatttaagttgtattggaaatgtaaagtgacattcattttgaaacaa 26252116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 254893 - 255068
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||||||||||||||||||||||| || || |||||||  |||||||||||||||   |||||||| ||||||||  |||||||||||||||    
T  254893 tcaaatgtcatagcaattttactaaaataaccctactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagta 254992  T
Q  117 tttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||        ||||| ||| |||| |||||||||| |||||||||||| ||||||    
T  254993 tttattgagggtaaagttggaagaaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttgaaacaa 255068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 28200204 - 28200379
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||||||| || |||||||  | |||||||||||   |||||||||| |||| |||| |||||||||||||||    
T  28200204 tcaaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagta 28200303  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgta-ttgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||| ||| | ||||||||||| || |||||||||||| ||||||    
T  28200304 tttattgagggtaaagttggaagaaaaaaattaaagttgcatttgaaaatgtagagcgacattcattttgaaacaa 28200379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 42650228 - 42650402
Alignment:
Q  17 taatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttgga 113  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||   | |||||||| ||||||||| | |||||||| |    
T  42650228 taatcaaatgtcatagcaattttactaaaataaccttagtttataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagaga-aaaagttgaa 42650326  T
Q  114 gtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaac 189  Q
    |||||| |||||||||||| ||||||       ||||| |||||||  |||||||||| |||||| ||||||||||    
T  42650327 gtatttcttgaaggtaaagctggaagaaaaaaattaaagttgtattagaaatgtaaagcgacatttattttaaaac 42650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 191
Target Start/End: Complemental strand, 44024715 - 44024543
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatt 118  Q
    |||||| |||||||||||||||||||||||||| || ||| | |  |||||||||||||||   |||||||| ||||||||| |||||||||| ||||||    
T  44024715 aaatgttatagcaattttactaaaataaccttattttatagggacaagacaaacttaaagttaaattgaaaattgtgtgagagagaaaagttgaagtatt 44024616  T
Q  119 tattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| ||||||||||||||       ||||| ||| ||||||||||||||| | |||||||||| ||||||    
T  44024615 tattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcggcattcattttgaaacaa 44024543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 17806359 - 17806529
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatt 118  Q
    |||||||||| |||||||||||||||||| ||  || |||||||  ||||||||||||| |   |||||||| ||| |||||  ||||||||||||||||    
T  17806359 aaatgtcataacaattttactaaaataactttcctttataagaaaaagacaaacttaaaattgcattgaaaattgtatgaga--gaaaagttggagtatt 17806456  T
Q  119 tattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||| |||||||       ||||| |||||||| |||||||||| |||| ||||||||||||||    
T  17806457 tattgaaggtaaaattggaagtaaaaaattaaagttgtattggaaatgtaaagcgacactcattttaaaacaa 17806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 2459176 - 2459006
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||  | |||||||||||   |||||||||| |||    || ||||||||| |||||    
T  2459176 tcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgt----gagagaaaagtttgagta 2459081  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||| |||| ||||||||||||||       ||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  2459080 tttgttgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 2459006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 22665107 - 22664937
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||| ||||||||||||||||||| |||||||| || |||||||  |||||||||||||||   ||| |||| |||    || ||| |||||||||||    
T  22665107 tcaaatatcatagcaattttactaaactaaccttactttataagaacaagacaaacttaaagttgaattaaaaattgt----gagagagaagttggagta 22665012  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||||||||||||       ||||  |||||||| ||||||||||||||||||||||| ||||||    
T  22665011 tttattgagggtaaagttggaagaaattaattaacgttgtattggaaatgtaaagtgacattcattttgaaacaa 22664937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 5854208 - 5854327
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatt 118  Q
    |||||||||| |||||||||||||||||| ||| || |||||||  |||||| ||||| ||   |||||||| |||||||||| ||||||||||||||||    
T  5854208 aaatgtcataacaattttactaaaataactttactttataagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatt 5854307  T
Q  119 tattgaaggtaaagttggaa 138  Q
    |||||| | |||||||||||    
T  5854308 tattgaggataaagttggaa 5854327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 11650180 - 11650056
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||| ||| |||||||||  ||||| |||||||||||||||| ||||||||||||||       ||||| ||||||||||||    
T  11650180 agacaaacttaaagttgcattggaaattgtgtgaga--gaaaaattggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaa 11650083  T
Q  165 tgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||||| ||||||    
T  11650082 tgtaaagtgacattcattttgaaacaa 11650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 12002368 - 12002244
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| ||||||||| |  |||||||||||||||||||||||||||| ||||||       ||||| |||||||| |||    
T  12002368 agacaaacttaaagttgcattgaaaattgtgtgagaaa--aaagttggagtatttattgaaggtaaagctggaagaaaaaaattaaagttgtattggaaa 12002271  T
Q  165 tgtaaagtgacattcattttaaaacaa 191  Q
    |||||| ||||||||||||||||||||    
T  12002270 tgtaaaatgacattcattttaaaacaa 12002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 672264 - 672383
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||| ||||| |||||||||||||||||||||| || |||||||  ||||||||||||| |   |||||||| |||||||||  |||||||| |||||    
T  672264 tcaaatatcatatcaattttactaaaataaccttactt-ataagaaaaagacaaacttaaatttgcattgaaaattgtgtgaga--gaaaagttagagta 672360  T
Q  117 tttattgaaggtaaagttggaag 139  Q
    |||||||| ||||||||||||||    
T  672361 tttattgagggtaaagttggaag 672383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 49894959 - 49894869
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgaga 100  Q
    |||||| |||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||   |||||||| |||||||||    
T  49894959 aaaatagtcaaatgtcataacaattttactaaaataaccttactttataagaataagacaaacttaaagttacattgaaaattgtgtgaga 49894869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 5317590 - 5317731
Alignment:
Q  50 ccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn 146  Q
    ||||| || |||||||  |||||||||||||||   |||||||| ||||   || |||||||||| |||||||||||| ||||||||||||||           
T  5317590 ccttattttataagaaaaagacaaacttaaagttgcattgaaaattgtg---gagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaa 5317686  T
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||    
T  5317687 ttaaagttgtattgaaattgtaaagtgacattcattttgaaacaa 5317731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 9333250 - 9333160
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagtattgaaaactgtgtgagatagaaaagttgga 113  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||| ||||||||||   |||||||||| ||||||||| | ||||||||||    
T  9333250 tcaaatgtcatagcaattttactaaaacaaccttactttataagaataagacaaactt---gtattgaaaattgtgtgagagataaaagttgga 9333160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 9357023 - 9356933
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagtattgaaaactgtgtgagatagaaaagttgga 113  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||| ||||||||||   |||||||||| ||||||||| | ||||||||||    
T  9357023 tcaaatgtcatagcaattttactaaaacaaccttactttataagaataagacaaactt---gtattgaaaattgtgtgagagataaaagttgga 9356933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 2245919 - 2245789
Alignment:
Q  59 ataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattg 155  Q
    |||||||  ||||||||||||||    |||||||| ||||  ||| ||||||||| ||||||||||||| |||||||||| |||       ||||| |||    
T  2245919 ataagaaaaagacaaacttaaagatgcattgaaaattgtgaaagagagaaaagtttgagtatttattgagggtaaagttgaaagaaaaagattaaagttg 2245820  T
Q  156 tattgaaaatgtaaagtgacattcattttaa 186  Q
    |||||||||||||| ||||||||||||||||    
T  2245819 tattgaaaatgtaaggtgacattcattttaa 2245789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 178
Target Start/End: Original strand, 28751406 - 28751549
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| |  ||||| || |||||||   ||||||||||||||   |||||||| |||| ||||  |||||||| ||||||||||||| |||||||    
T  28751406 ttttactaaactgcccttactttataagaaaaggacaaacttaaagttacattgaaaattgtgcgaga--gaaaagtttgagtatttattgagggtaaag 28751503  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacatt 178  Q
    |||||||       ||||| ||||||||||||||||||||||||||    
T  28751504 ttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacatt 28751549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 40719100 - 40719020
Alignment:
Q  104 aaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||||||||||||||||||||||||||||||||||       ||||| ||||||| |||||||||| |||||||||||||    
T  40719100 aaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 11134442 - 11134614
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||  || ||||||||||||| ||||| || ||  ||   ||||||||||| |||   |||| ||| |||| |||| |||||||||||||||    
T  11134442 tcaaatgtcatgacagttttactaaaatagccttactttatttgacaaagacaaacttatagttgcattggaaattgtgagagagagaaaagttggagta 11134541  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaaca 190  Q
    |||||||| || ||||||||||        ||||| ||| |||||||||||||||||||||||||||| |||||    
T  11134542 tttattgagggcaaagttggaa-aaagaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaaca 11134614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 191
Target Start/End: Original strand, 15698798 - 15698905
Alignment:
Q  82 tattgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcat 181  Q
    ||||||||| | |||||||  |||||||| |||||||||||||  |||||||||||||       ||||| |||||||| |||| |||||||||||||||    
T  15698798 tattgaaaattatgtgaga--gaaaagtttgagtatttattgagagtaaagttggaagaagaaaattaaagttgtattggaaatataaagtgacattcat 15698895  T
Q  182 tttaaaacaa 191  Q
    ||||||||||    
T  15698896 tttaaaacaa 15698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 1428987 - 1428865
Alignment:
Q  69 gacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaat 165  Q
    ||||||||||||||   |||| ||| |||||||||  |||||||| ||||||||||||| |||||||||| |||       || || |||||||  ||||    
T  1428987 gacaaacttaaagttgaattggaaattgtgtgaga--gaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaatttaagttgtattagaaat 1428890  T
Q  166 gtaaagtgacattcattttaaaaca 190  Q
    |||||||||||||||||||||||||    
T  1428889 gtaaagtgacattcattttaaaaca 1428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 9552337 - 9552436
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||||||||||||||||||||| |||| || |||||||  |||||| ||||||||   |||||||| | ||||||| | ||||||| |||||    
T  9552337 tcaaatgtcatagcaattttactaaaataaacttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgagagaaaaaagtttgagta 9552436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 17919850 - 17919967
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| ||||||||| |  |||||| |||||| |||||| ||||||||||||||       ||||| |||||||| |||    
T  17919850 agacaaacttaaagttgcattgaaaattgtgtgagaaa--aaagttagagtatatattgagggtaaagttggaagaaaaaaattaaagttgtattggaaa 17919947  T
Q  165 tgtaaagtgacattcatttt 184  Q
    |||||||||| |||||||||    
T  17919948 tgtaaagtgatattcatttt 17919967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 45377180 - 45377297
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| |||| ||||  ||||||||||||||| |||||| ||||||||||| ||        |||| |||||||| |||    
T  45377180 agacaaacttaaagtttcattgaaaattgtgcgaga--gaaaagttggagtatctattgagggtaaagttgggagaaaaaaagtaaagttgtattggaaa 45377277  T
Q  165 tgtaaagtgacattcatttt 184  Q
    ||||||||||||||||||||    
T  45377278 tgtaaagtgacattcatttt 45377297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 50591302 - 50591396
Alignment:
Q  22 aaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttgga 113  Q
    |||||||||| |||||||||||||||||||||| || ||| |||  |||||||||||||   | |||||||| ||||||| | ||||||||||||    
T  50591302 aaatgtcataacaattttactaaaataaccttattttataggaacaagacaaacttaaaattgcattgaaaattgtgtgatagagaaaagttgga 50591396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 15647128 - 15647215
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||| | ||||||||||| ||         ||| |||||||||||||||||||||||||||||||| ||||||    
T  15647128 agaaaagttggagtatttattaagggtaaagttgggagaaaaaaa--aaatttgtattgaaaatgtaaagtgacattcattttgaaacaa 15647215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 84604 - 84648
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  84604 ttaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 84648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 24041111 - 24041155
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  24041111 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 24041155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 43738319 - 43738408
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| ||| ||||||||||||  ||||||||| |||       || || ||||||||||||||| |||||||||||||||||||||||    
T  43738319 agaaaaattgaagtatttattgagagtaaagttgaaagaaaaaaatttaagttgtattgaaaatgtgaagtgacattcattttaaaacaa 43738408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 52403559 - 52403482
Alignment:
Q  106 aagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattt 183  Q
    ||||| ||||||||||||| |||||||||||||        ||||| ||||||||||||| |||||||||||||||||    
T  52403559 aagtttgagtatttattgagggtaaagttggaatagaaaacttaaagttgtattgaaaatttaaagtgacattcattt 52403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 12851827 - 12851739
Alignment:
Q  103 gaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| |||||| |||||| ||||||||||| ||       ||||| || ||||| ||||||||||||||||||||||| ||||||    
T  12851827 gaaaagtttgagtatatattgagggtaaagttgggagaaaaaaattaaagttctattggaaatgtaaagtgacattcattttgaaacaa 12851739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 44583912 - 44583770
Alignment:
Q  50 ccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn 146  Q
    ||||| || |||||||  |||||||||||| ||   |||||||||| ||||| |  |||||||| ||||| ||||| | ||||||||  ||||           
T  44583912 ccttattttataagaaaaagacaaacttaatgttgcattgaaaactatgtgaaa--gaaaagttagagtacttattaagggtaaagtcagaagaaaaaaa 44583815  T
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||    
T  44583814 ttaaagttgtattaaaaatgtaaggtgacattcattttaaaacaa 44583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 50158371 - 50158454
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn-ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||||||||||| |||| |||| | ||||||||||||        ||||| ||||||||||||||||||||||||||||||||    
T  50158371 agaaaagttggagaattttttgaggttaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 50158454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 6332271 - 6332164
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn-ttaaaattgtattgaaaatgtaaagtgacattcat 181  Q
    |||||||| ||||||||| |  |||||||||||||||||| |  ||||||||| |||        ||||| |||| || |||||||||||||||||||||    
T  6332271 attgaaaattgtgtgagaaa--aaagttggagtatttattaagagtaaagttgaaagaaaaaaaattaaagttgtgttaaaaatgtaaagtgacattcat 6332174  T
Q  182 tttaaaacaa 191  Q
    ||||||||||    
T  6332173 tttaaaacaa 6332164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 38132189 - 38132268
Alignment:
Q  37 tttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttgga 113  Q
    |||||||||||||||||| || ||| |||  ||||| |||||||||   |||||||| ||||||||| ||||||||||||    
T  38132189 tttactaaaataaccttactttataggaacaagacatacttaaagttgcattgaaaattgtgtgagaaagaaaagttgga 38132268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 40061007 - 40061044
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  40061007 ttaaagttgtattgaaaatgtaaagtgacattcatttt 40061044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 9552440 - 9552484
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||    
T  9552440 ttaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 9552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 38132278 - 38132322
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  38132278 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 38132322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 43105692 - 43105732
Alignment:
Q  148 taaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  43105692 taaagttgtattgaaaatgtaaggtgacattcattttaaaa 43105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 48259964 - 48260008
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  48259964 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 48260008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 6377387 - 6377428
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||||||  ||||||||||||||||| |||||||||||||||    
T  6377387 ttaaaatgttattgaaaatgtaaagtaacattcattttaaaa 6377428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 10691047 - 10691080
Alignment:
Q  153 ttgtattgaaaatgtaaagtgacattcattttaa 186  Q
    |||||||||||||||||||||||||||| |||||    
T  10691047 ttgtattgaaaatgtaaagtgacattcagtttaa 10691080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 43755095 - 43755058
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  43755095 ttaaagttgtattgaaaatgtaaagtgacgttcatttt 43755058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 9333149 - 9333105
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||  ||||||||||| ||||| ||||||||||||    
T  9333149 ttaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9333105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 9356922 - 9356878
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||  ||||||||||| ||||| ||||||||||||    
T  9356922 ttaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 26582967 - 26582923
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||| ||||| ||||||||||||    
T  26582967 ttaaagttgtattggaaatgtaaagtaacatttattttaaaacaa 26582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 43929764 - 43929683
Alignment:
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||| ||||||||||||||       ||||| |||||||| |||   ||| ||||||||||||| ||||||    
T  43929764 tggagtatttattgagggtaaagttggaaggaaaaaattaaagttgtattggaaactgaaattgacattcattttgaaacaa 43929683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 48320100 - 48320144
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||||||||||||| |||||| ||||| ||||||||||||    
T  48320100 ttaaatttgtattgaaaatataaagtaacatttattttaaaacaa 48320144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 18673081 - 18673251
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || || ||||  | |||||||||||   |||||||||| ||||||||| |||||||||||||||    
T  18673081 tcaaatgtcataacaattttactaaaataaccttactt-atcagaaaaatacaaacttaaaattgtattgaaaattgtgtgagagagaaaagttggagta 18673179  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaa 188  Q
    |||||| ||||||||||||||||       ||||| | | ||||||||||||||| ||||||||||||||||    
T  18673180 tttattaaaggtaaagttggaagaaaaaaattaaagtcgcattgaaaatgtaaagcgacattcattttaaaa 18673251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 34461557 - 34461737
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagt 109  Q
    |||||| |||||||||||| ||||||||||||||||| |||| || | | |||  |||||||||||||||   |||||||| ||||||||| ||||||||    
T  34461557 aaaatagtcaaatgtcataacaattttactaaaataatcttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagt 34461656  T
Q  110 tggagtatttattgaaggtaaagttggaag-nnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaac 189  Q
    |||||| |||||||| ||||||||||||||        ||||| |||||||| ||||||||||||||||||||||| ||||    
T  34461657 tggagtttttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 14541728 - 14541900
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||||||||| |||||||||||||||||||||| || |||||||  |||||||||||||||   ||||||||   ||||||| |||||||||| ||||    
T  14541728 tcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaa--ttgtgagagagaaaagttgaagta 14541825  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| | | ||||||||||||       ||||| |||||||  ||||||||||||||||||||||| ||||||    
T  14541826 tttattaaggataaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 14541900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 34168194 - 34168353
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    ||||||||||||||||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| ||||||||  ||||      |||||    
T  34168194 tcaaatgtcatagcaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgag--agaa------gagta 34168285  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||| |||| ||||||||||||||       ||||| ||||||||||||||||||||||||||||||||    
T  34168286 tttcttgagggtaaagttggaagaaaaaagttaaagttgtattgaaaatgtaaagtgacattcatttt 34168353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 27416673 - 27416506
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaa--ctgtgtgagatagaaaagttggag 114  Q
    ||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||| |   | ||||||||   ||||||||| | |||||||||||    
T  27416673 tcaaatgtcatagcaattttactaaaataaccttactttataagaaaaagacaaacttagaattgcattgaaaattgtgtgtgagagaaaaaagttggag 27416574  T
Q  115 tatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||||||||| |||||||||||| |        |||| |||||||| |||||||||||||||||||||||    
T  27416573 tatttattgagggtaaagttggacgaaaaac--taaagttgtattggaaatgtaaagtgacattcatttt 27416506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 13109166 - 13108993
Alignment:
Q  13 aaaataatcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaa---gtattgaaaactgtgtgagatagaaaagt 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||| || |||||||  ||||||| |||||   | ||| |||| ||||||||| ||||||||    
T  13109166 aaaatattcaaatgtcatagtaattttactaaaataaccttattttataagaaaaagacaaatttaaatttgcattaaaaattgtgtgagagagaaaagt 13109067  T
Q  110 tggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||||||||||| | | || |||||||||       ||||| ||| |||||||||||||| |||||||||||||    
T  13109066 tggagtatttattaaggatagagttggaag-aaaaaattaaagttgcattgaaaatgtaaaatgacattcatttt 13108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 191
Target Start/End: Complemental strand, 7612651 - 7612496
Alignment:
Q  37 tttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagt 133  Q
    ||||||||| |  ||||| || |||||||  ||||||| |||||||   |||||||| |||||||||  |||||||||||||||||||| | ||||||||    
T  7612651 tttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttggagtatttatttagggtaaagt 7612554  T
Q  134 tggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||       ||||  |||||||||||||||||||||||||||||||||||||||    
T  7612553 tggaagagaaaacttaatgttgtattgaaaatgtaaagtgacattcattttaaaacaa 7612496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 8471429 - 8471333
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttgga 113  Q
    |||||||||||| |||||||||||||||||||||| || |||||||  |||||||||||||||   |||||||| ||||||||| ||||||||||||    
T  8471429 tcaaatgtcataccaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 8471333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 9022499 - 9022393
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    |||||||| ||||||||| |  |||||||||||||||||||| ||||||||||||||       ||||| |||||||| ||| |||||||||||||||||    
T  9022499 attgaaaattgtgtgagaaa--aaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaacgtaaagtgacattcatt 9022402  T
Q  183 ttaaaacaa 191  Q
    |||||||||    
T  9022401 ttaaaacaa 9022393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 11257694 - 11257540
Alignment:
Q  36 ttttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaag 132  Q
    |||||||||| || | ||| || |||||||  |||||||||||||||   |||||||| |||||||||  ||||||||| ||||||||||||   |||||    
T  11257694 ttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaaaattgtgtgaga--gaaaagttgaagtatttattgagattaaag 11257597  T
Q  133 ttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||       ||||| ||||||| |||||||||||||||||||||||||||||||    
T  11257596 ttggaagaaaaa--ttaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 11257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 3095534 - 3095656
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| |||| ||||  ||||||||| |||||||||||| ||||||||||| ||       ||||| ||||||||||||    
T  3095534 agacaaacttaaagttgcattgaaaagtgtgcgaga--gaaaagttgaagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaaa 3095631  T
Q  165 tgtaaagtgacattcattttaaaac 189  Q
    |||||||| ||||||||||||||||    
T  3095632 tgtaaagtaacattcattttaaaac 3095656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 8382526 - 8382629
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    |||||||| |||||||||  ||||||||||||||| |||||| ||||||||||  ||       ||||| ||||||||||||||||||||||||||||||    
T  8382526 attgaaaattgtgtgaga--gaaaagttggagtatatattgagggtaaagttgagagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatt 8382623  T
Q  183 ttaaaa 188  Q
    ||||||    
T  8382624 ttaaaa 8382629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 5588539 - 5588628
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||||||| ||||||||||||||||||||||||||||       ||||| |||||||| ||||||||| ||||||||| ||||||||||    
T  5588539 agaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 5588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 27109852 - 27109975
Alignment:
Q  69 gacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaat 165  Q
    ||||||||||||||   |||| ||| |||||||||  |||||||| ||||||||||||| ||||||||||||||       ||||| |||||||| ||||    
T  27109852 gacaaacttaaagttgcattggaaattgtgtgaga--gaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaat 27109949  T
Q  166 gtaaagtgacattcattttaaaacaa 191  Q
    | ||||||||||||||||| ||||||    
T  27109950 ggaaagtgacattcattttgaaacaa 27109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 36915441 - 36915365
Alignment:
Q  115 tatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||| ||||||    
T  36915441 tatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 32661427 - 32661310
Alignment:
Q  68 agacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaa 164  Q
    |||||||||||||||   |||||||| |||||||||  |||||||| ||||||||||||| ||||||||||| ||       ||||| ||||||||||||    
T  32661427 agacaaacttaaagttgtattgaaaattgtgtgaga--gaaaagttagagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaa 32661330  T
Q  165 tgtaaagtgacattcatttt 184  Q
    |||| ||| |||||||||||    
T  32661329 tgtagagtaacattcatttt 32661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 22601266 - 22601134
Alignment:
Q  59 ataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattg 155  Q
    |||||||  |||||||||||||||   |||||||| | |||||||  |||| |||||||||||||| || ||||||||||||||       ||||| |||    
T  22601266 ataagaaaaagacaaacttaaagttgcattgaaaattctgtgaga--gaaaggttggagtatttatcgagggtaaagttggaagaaacaa-ttaaagttg 22601170  T
Q  156 tattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||||||||||||||||||||||| ||||||    
T  22601169 tattggaaatgtaaagtgacattcattttgaaacaa 22601134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 35052577 - 35052469
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatt 182  Q
    |||||||| | ||||||| |||||| || |||||||||||||||| ||||||| |||       ||||| |||||||| |||||||||  ||||||||||    
T  35052577 attgaaaattatgtgagagagaaaattttgagtatttattgaagggaaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaacgacattcatt 35052478  T
Q  183 ttaaaacaa 191  Q
    |||||||||    
T  35052477 ttaaaacaa 35052469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 81 - 190
Target Start/End: Complemental strand, 30789041 - 30788934
Alignment:
Q  81 gtattgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattca 180  Q
    |||||||||| | |||||||  |||||||||||||||||| | | ||||||||| ||||       ||||| |||||||||| ||||||||||||||| |    
T  30789041 gtattgaaaattatgtgaga--gaaaagttggagtatttactaagggtaaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacattta 30788944  T
Q  181 ttttaaaaca 190  Q
    ||||||||||    
T  30788943 ttttaaaaca 30788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 1774170 - 1774214
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  1774170 ttaaagttgtattgaaaatgtaaattgacattcattttaaaacaa 1774214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 2803348 - 2803392
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||    
T  2803348 ttaaaattgtattgaaaatgtaaagtgacatttattttgaaacaa 2803392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 32061534 - 32061578
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||    
T  32061534 ttaaatttgtatagaaaatgtaaagtgacattcattttaaaacaa 32061578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 38329140 - 38329184
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||    
T  38329140 ttaaagttgtattgaaaatataaagtgacattcattttaaaacaa 38329184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 42946209 - 42946120
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||| || ||||||||||||| |||||| ||| |||       ||||| ||||||| |||||||||| ||||||||||||||||||||    
T  42946209 agaaaaattagagtatttattgagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 42946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 5044284 - 5044378
Alignment:
Q  94 tgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn-ttaaaattgtattgaaaatgtaaagtgacattcattttaaa 187  Q
    |||| ||||||||||||| ||||||||||||   ||||||||||||        |||||||| ||||||||||||||| ||| ||||||||||||    
T  5044284 tgtgtgatagaaaagttgaagtatttattgagaataaagttggaagaaaaaaaattaaaattatattgaaaatgtaaaatgatattcattttaaa 5044378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 16208992 - 16208955
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  16208992 ttaaagttgtattgaaaatgtaaagtgacattcatttt 16208955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 8107270 - 8107304
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcat 181  Q
    ||||| |||||||||||||||||||||||||||||    
T  8107270 ttaaagttgtattgaaaatgtaaagtgacattcat 8107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 11336124 - 11336162
Alignment:
Q  153 ttgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  11336124 ttgtattgaaaatgtaaaatgatattcattttaaaacaa 11336162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 32326773 - 32326873
Alignment:
Q  83 attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn-ttaaaattgtattgaaaatgtaaagtgacattcat 181  Q
    |||||||| ||||||||| |  |||||||||||||||||||  |||||| ||| |||        ||||| |||||||||||||||||||||||||| ||    
T  32326773 attgaaaattgtgtgagaaa--aaagttggagtatttattgtgggtaaaattgaaaggaaaaaaattaaagttgtattgaaaatgtaaagtgacatttat 32326870  T
Q  182 ttt 184  Q
    |||    
T  32326871 ttt 32326873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 2067764 - 2067728
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2067764 ttaaaattgtattgaaaatgtaaa-tgacattcatttt 2067728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 7129343 - 7129306
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  7129343 ttaaagttgcattgaaaatgtaaagtgacattcatttt 7129306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 29931342 - 29931386
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| |||||||| ||||||||||||| ||| ||||||||||||    
T  29931342 ttaaagttgtattggaaatgtaaagtgatatttattttaaaacaa 29931386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 33870820 - 33870759
Alignment:
Q  123 gaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcatttt 184  Q
    |||||||||||||||||       ||||| ||||||||||||| ||||||||||| ||||||    
T  33870820 gaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgacatccatttt 33870759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 45187395 - 45187439
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    ||||| ||||||||||||| |||||||||||| ||||| ||||||    
T  45187395 ttaaagttgtattgaaaatataaagtgacatttattttgaaacaa 45187439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 321898 - 321724
Alignment:
Q  20 tcaaatgtcatagcaattttactaaaataaccttagttcataagaattagacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagta 116  Q
    |||||| |||||| ||||||||||||||||||||| || ||| |||  ||||||||||||| |   |||||||| |||||||||  |||||||| |||||    
T  321898 tcaaatatcatagtaattttactaaaataaccttactttataggaacaagacaaacttaaaattgcattgaaaattgtgtgagagcgaaaagtttgagta 321799  T
Q  117 tttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
     ||||||| ||||||||||||||       ||||| |||||||| |||||||||| |||||||||||||||||||    
T  321798 attattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttaaaacaa 321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 13124 - 13213
Alignment:
Q  102 agaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||| |||||||||||| ||||||||||| ||       |||||||||||||| |||||||||||||| |||||||||||||||    
T  13124 agaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaaattgtattggaaatgtaaagtgacgttcattttaaaacaa 13213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 4140 - 4263
Alignment:
Q  69 gacaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaattgtattgaaaat 165  Q
    ||||||||||||||   |||||||| | |||||||  |||||||||||||||||||||| | ||||||||||||       |||||||||||||  ||||    
T  4140 gacaaacttaaagtttgattgaaaattatgtgaga--gaaaagttggagtatttattgaggataaagttggaagaaaaaaattaaaattgtattagaaat 4237  T
Q  166 gtaaagtgacattcattttaaaacaa 191  Q
    ||||||| ||||| ||||||||||||    
T  4238 gtaaagtaacatttattttaaaacaa 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 7732 - 7852
Alignment:
Q  70 acaaacttaaagt---attgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnnttaaaa-ttgtattgaaaat 165  Q
    |||||||||||||   |||||||| |||||||||  ||||||||| ||||||||||||   ||||||||||||       |||||| ||||||| |||||    
T  7732 acaaacttaaagttgcattgaaaattgtgtgaga--gaaaagttgaagtatttattgagattaaagttggaagaaaaa--ttaaaagttgtatt-aaaat 7826  T
Q  166 gtaaagtgacattcattttaaaacaa 191  Q
    ||||||||||||||||||||||||||    
T  7827 gtaaagtgacattcattttaaaacaa 7852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 8263 - 8156
Alignment:
Q  84 ttgaaaactgtgtgagatagaaaagttggagtatttattgaaggtaaagttggaagnnnnnnn--ttaaaattgtattgaaaatgtaaagtgacattcat 181  Q
    ||||||| |||||||||  ||||||||||||||||| |||| | |||||||| |||         ||||| |||||||||||||||||| ||||||||||    
T  8263 ttgaaaattgtgtgaga--gaaaagttggagtattttttgaggttaaagttgaaagaaaaaaaaattaaagttgtattgaaaatgtaaattgacattcat 8166  T
Q  182 tttaaaacaa 191  Q
    ||| ||||||    
T  8165 tttgaaacaa 8156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 31667 - 31623
Alignment:
Q  147 ttaaaattgtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||    
T  31667 ttaaaattttattggaaatgtaaagtaacattcattttaaaacaa 31623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 10074 - 10110
Alignment:
Q  155 gtattgaaaatgtaaagtgacattcattttaaaacaa 191  Q
    |||||||||||  ||||||||||||||||||||||||    
T  10074 gtattgaaaattgaaagtgacattcattttaaaacaa 10110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University