View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18077_low_36 (Length: 321)
Name: NF18077_low_36
Description: NF18077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18077_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 18 - 310
Target Start/End: Original strand, 47125663 - 47125955
Alignment:
| Q |
18 |
agaacttcatgagcagtttgcaaaagatataaaagtctcatgatcttcataatcaatgaataaattcattgattataagtcaaaacttacacccaaaaat |
117 |
Q |
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| T |
47125663 |
agaacttcatgagtagtttgcaaaagatataaaagtctcatgatcttcataaacaatgaataaattcattgattataagtcaaaacttatacacaaaaat |
47125762 |
T |
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| Q |
118 |
ttcctgcattatataaatagttgatttgataattacaagctcaagtagaaaaagttggagtgcaacttattgatcaatcggacaacggttgtattggctt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47125763 |
ttcctgcattatataaatagttgatttgataattacaagctcaagtagaaaaagttggagtgcaacttattgatcaatcggacaacggttgtattggctt |
47125862 |
T |
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| Q |
218 |
gagtttatctttttagggttctttttcatcattaagtatattaattaattggatcaatgatttaagagttgtccctcaaatttttcatctctc |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
47125863 |
gagtttatctttttagggttctttttcatcattaagtatattaattaattggatcaatgatttaagagttgtccctcaaatttttcatttctc |
47125955 |
T |
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