View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18078_high_20 (Length: 405)

Name: NF18078_high_20
Description: NF18078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18078_high_20
NF18078_high_20
[»] chr3 (22 HSPs)
chr3 (10-387)||(1389854-1390231)
chr3 (64-112)||(27505321-27505369)
chr3 (63-112)||(34185053-34185102)
chr3 (64-112)||(15999951-15999999)
chr3 (64-111)||(24204983-24205030)
chr3 (64-111)||(25775577-25775624)
chr3 (64-112)||(5407200-5407248)
chr3 (64-112)||(40052382-40052430)
chr3 (64-116)||(51512114-51512166)
chr3 (64-112)||(55401145-55401193)
chr3 (64-111)||(4987222-4987269)
chr3 (65-112)||(20503536-20503583)
chr3 (64-111)||(28918073-28918120)
chr3 (65-112)||(40993276-40993323)
chr3 (65-111)||(8412889-8412935)
chr3 (10-112)||(52369803-52369905)
chr3 (65-106)||(3631755-3631796)
chr3 (66-111)||(29508522-29508567)
chr3 (64-112)||(2408591-2408639)
chr3 (64-100)||(8071027-8071063)
chr3 (64-112)||(11610579-11610627)
chr3 (64-112)||(41961580-41961628)
[»] chr1 (28 HSPs)
chr1 (62-111)||(16297223-16297272)
chr1 (43-111)||(11412709-11412777)
chr1 (62-111)||(42359391-42359440)
chr1 (65-113)||(40258873-40258921)
chr1 (63-101)||(6612112-6612150)
chr1 (63-112)||(10233325-10233374)
chr1 (75-112)||(48415667-48415704)
chr1 (64-112)||(1704936-1704984)
chr1 (64-112)||(2218298-2218346)
chr1 (64-112)||(9828125-9828173)
chr1 (64-112)||(18337399-18337447)
chr1 (64-112)||(40917830-40917878)
chr1 (64-111)||(1486646-1486693)
chr1 (64-111)||(17778623-17778670)
chr1 (70-112)||(7918155-7918197)
chr1 (78-112)||(15449171-15449205)
chr1 (62-112)||(21365993-21366043)
chr1 (70-112)||(22947806-22947848)
chr1 (43-112)||(15765807-15765876)
chr1 (67-112)||(22515828-22515873)
chr1 (64-112)||(6427545-6427593)
chr1 (68-112)||(6574051-6574095)
chr1 (77-113)||(10572534-10572570)
chr1 (64-112)||(10577676-10577724)
chr1 (64-112)||(29144321-29144369)
chr1 (64-112)||(32461394-32461442)
chr1 (64-112)||(37598901-37598949)
chr1 (64-112)||(46940749-46940797)
[»] chr7 (23 HSPs)
chr7 (64-112)||(9778575-9778623)
chr7 (63-112)||(1433528-1433577)
chr7 (64-112)||(5409772-5409820)
chr7 (64-112)||(28155624-28155672)
chr7 (64-112)||(29763130-29763178)
chr7 (65-109)||(40287306-40287350)
chr7 (65-112)||(21880223-21880270)
chr7 (69-110)||(8842282-8842323)
chr7 (64-112)||(598278-598326)
chr7 (64-112)||(6490786-6490834)
chr7 (64-112)||(30813867-30813915)
chr7 (64-112)||(32287404-32287452)
chr7 (64-112)||(43027405-43027453)
chr7 (64-108)||(43250074-43250118)
chr7 (69-112)||(5307331-5307374)
chr7 (69-112)||(7438792-7438835)
chr7 (70-112)||(35862027-35862069)
chr7 (62-112)||(38804490-38804540)
chr7 (67-112)||(24339726-24339771)
chr7 (64-112)||(10230025-10230073)
chr7 (64-112)||(14729773-14729821)
chr7 (64-112)||(21138932-21138980)
chr7 (64-112)||(25822736-25822784)
[»] chr8 (22 HSPs)
chr8 (63-114)||(29447038-29447089)
chr8 (64-112)||(36450695-36450743)
chr8 (64-111)||(44067597-44067644)
chr8 (63-112)||(22652056-22652105)
chr8 (64-112)||(29510234-29510282)
chr8 (64-111)||(926730-926777)
chr8 (65-112)||(13397622-13397669)
chr8 (69-112)||(13436911-13436954)
chr8 (65-108)||(14639735-14639778)
chr8 (65-112)||(31557067-31557114)
chr8 (22-112)||(13009423-13009512)
chr8 (70-112)||(34127173-34127215)
chr8 (67-112)||(4673355-4673400)
chr8 (63-112)||(8343036-8343085)
chr8 (75-112)||(9383047-9383084)
chr8 (67-112)||(15816059-15816104)
chr8 (63-112)||(29447524-29447573)
chr8 (64-112)||(8343397-8343445)
chr8 (64-112)||(14134769-14134817)
chr8 (68-112)||(17751730-17751774)
chr8 (68-112)||(17760717-17760761)
chr8 (64-112)||(34450962-34451010)
[»] chr4 (21 HSPs)
chr4 (64-115)||(3947699-3947750)
chr4 (62-112)||(18513176-18513226)
chr4 (64-112)||(23292927-23292975)
chr4 (64-112)||(30982808-30982856)
chr4 (65-112)||(11931362-11931409)
chr4 (65-112)||(17876237-17876284)
chr4 (64-111)||(22440559-22440606)
chr4 (64-112)||(2625960-2626008)
chr4 (64-112)||(20633541-20633589)
chr4 (64-112)||(24613631-24613679)
chr4 (64-112)||(42640594-42640642)
chr4 (65-112)||(715546-715593)
chr4 (65-112)||(752872-752919)
chr4 (77-112)||(28470448-28470483)
chr4 (64-110)||(28084594-28084640)
chr4 (64-113)||(30838291-30838340)
chr4 (64-113)||(40965341-40965390)
chr4 (67-112)||(53381531-53381576)
chr4 (68-112)||(15029845-15029889)
chr4 (64-112)||(18966579-18966627)
chr4 (64-112)||(24343583-24343631)
[»] chr6 (26 HSPs)
chr6 (64-114)||(31385000-31385050)
chr6 (63-115)||(31959219-31959271)
chr6 (65-110)||(32978842-32978887)
chr6 (64-104)||(21395262-21395302)
chr6 (64-112)||(28152168-28152216)
chr6 (65-112)||(4878014-4878060)
chr6 (77-112)||(8805525-8805560)
chr6 (77-112)||(10649371-10649406)
chr6 (64-110)||(8389411-8389457)
chr6 (64-110)||(9025448-9025494)
chr6 (62-112)||(9107300-9107350)
chr6 (46-112)||(33419226-33419292)
chr6 (63-112)||(7248438-7248487)
chr6 (63-112)||(17841530-17841579)
chr6 (79-112)||(18851048-18851081)
chr6 (68-112)||(7490108-7490152)
chr6 (64-112)||(7625186-7625234)
chr6 (64-112)||(7938170-7938218)
chr6 (64-112)||(8365449-8365497)
chr6 (64-112)||(8776909-8776957)
chr6 (64-112)||(9027237-9027285)
chr6 (64-112)||(10770608-10770656)
chr6 (64-112)||(16766778-16766826)
chr6 (64-112)||(17327591-17327639)
chr6 (84-112)||(34446661-34446689)
chr6 (64-112)||(34595204-34595252)
[»] chr2 (17 HSPs)
chr2 (59-112)||(10535686-10535739)
chr2 (64-112)||(37419824-37419872)
chr2 (65-111)||(2438661-2438707)
chr2 (64-112)||(26769592-26769640)
chr2 (64-112)||(38117100-38117148)
chr2 (77-112)||(3444827-3444862)
chr2 (77-112)||(18255945-18255980)
chr2 (65-112)||(18840954-18841001)
chr2 (64-111)||(42832234-42832281)
chr2 (83-112)||(30717460-30717489)
chr2 (63-112)||(34993923-34993972)
chr2 (62-110)||(17776666-17776714)
chr2 (64-112)||(24009365-24009413)
chr2 (64-112)||(28596539-28596587)
chr2 (113-157)||(32364756-32364800)
chr2 (64-112)||(37559047-37559095)
chr2 (64-112)||(42511323-42511371)
[»] scaffold0050 (1 HSPs)
scaffold0050 (64-110)||(70348-70394)
[»] scaffold0652 (1 HSPs)
scaffold0652 (64-113)||(402-451)
[»] scaffold0380 (1 HSPs)
scaffold0380 (64-112)||(8671-8719)
[»] scaffold0003 (1 HSPs)
scaffold0003 (64-112)||(241675-241723)
[»] chr5 (21 HSPs)
chr5 (64-112)||(2436981-2437029)
chr5 (64-112)||(14873592-14873640)
chr5 (64-112)||(31084398-31084446)
chr5 (65-112)||(19820329-19820376)
chr5 (64-111)||(21190998-21191045)
chr5 (63-110)||(39268541-39268588)
chr5 (64-111)||(41995534-41995581)
chr5 (65-111)||(30502330-30502376)
chr5 (65-111)||(30542673-30542719)
chr5 (64-105)||(17088361-17088402)
chr5 (64-113)||(21542111-21542160)
chr5 (67-112)||(39698625-39698670)
chr5 (63-112)||(43564950-43564999)
chr5 (64-112)||(21522831-21522879)
chr5 (64-112)||(21533397-21533445)
chr5 (64-112)||(21576686-21576734)
chr5 (64-112)||(30098407-30098455)
chr5 (64-112)||(32766873-32766921)
chr5 (64-112)||(35017113-35017161)
chr5 (64-112)||(42893430-42893478)
chr5 (71-111)||(43001882-43001922)
[»] scaffold0793 (1 HSPs)
scaffold0793 (65-112)||(4822-4869)
[»] scaffold0009 (1 HSPs)
scaffold0009 (67-106)||(188473-188512)
[»] scaffold0007 (1 HSPs)
scaffold0007 (64-111)||(225199-225246)
[»] scaffold0004 (1 HSPs)
scaffold0004 (65-112)||(92893-92940)
[»] scaffold0306 (1 HSPs)
scaffold0306 (70-111)||(13482-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (70-111)||(21804-21845)
[»] scaffold0361 (1 HSPs)
scaffold0361 (64-112)||(14597-14645)
[»] scaffold0020 (1 HSPs)
scaffold0020 (64-112)||(135264-135312)
[»] scaffold0019 (1 HSPs)
scaffold0019 (64-112)||(71806-71854)


Alignment Details
Target: chr3 (Bit Score: 374; Significance: 0; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 10 - 387
Target Start/End: Original strand, 1389854 - 1390231
Alignment:
Q  10 ataattctatggaatcatacgtgtcgtgttggggtcggtgttagataccaatgtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1389854 ataattctatggaatcatacgtgtcgtgttggggtcggtgttagataccaatgtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttc 1389953  T
Q  110 ataataagctgttttcgtaaactatcatagagatattatgaacataaggaaaacaagtcacagataagttgttttcttaagtttccctatagcagaaagt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1389954 ataataagctgttttcgtaaactatcatagagatattatgaacataaggaaaacaagtcacagataagttgttttcttaagtttccctatagcagaaagt 1390053  T
Q  210 aagcttgaataaatcgatctaaacagcccgtcattctttgaccaggggcaaatatttgggtggagtttgtttgtaggtctaagggcttatgatggttcac 309  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1390054 aagcttgaataaatcgatccaaacagcccgtcattctttgaccaggggcaaatatttgggtggagtttgtttgtaggtctaagggcttatgatggttcac 1390153  T
Q  310 atgttgtgttgtggcatgttgtaattaattttatgactggaattaaaggccattctgttattggtggtatctggttct 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1390154 atgttgtgttgtggcatgttgtaattaattttatgactggaattaaaggccattctgttattggtggtatctggttct 1390231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 27505321 - 27505369
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  27505321 gtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcata 27505369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 34185102 - 34185053
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  34185102 tgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 15999999 - 15999951
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  15999999 gtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 24205030 - 24204983
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||    
T  24205030 gtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 25775577 - 25775624
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  25775577 gtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 5407248 - 5407200
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||| |||||||| ||||||||||| |||||||| |||||||||    
T  5407248 gtgtccgacgccaggacacgcctaatccaaagagtgtccatgcttcata 5407200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 40052382 - 40052430
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| |||||||| |||||||||||    
T  40052382 gtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcata 40052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 51512166 - 51512114
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataataa 116  Q
    ||||| |||||||||||| |||||| | |||||||||||| ||||||||||||    
T  51512166 gtgtctgacaccaggacacgcctaacctaaggagtgtccgcgcttcataataa 51512114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 55401145 - 55401193
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||    
T  55401145 gtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 4987269 - 4987222
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||| ||||| ||||||||| |||||||||||| ||||||    
T  4987269 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 20503536 - 20503583
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||| |||||| ||||| ||||||||| ||||||||||||||||||||    
T  20503536 tgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 20503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 28918073 - 28918120
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||  ||||| |||||||||||||||||||| ||||||||    
T  28918073 gtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 40993323 - 40993276
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||| ||||| ||||||||| |||||||||| |||||||||    
T  40993323 tgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcata 40993276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 8412935 - 8412889
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||| ||||||||||||||||||| |||  |||||||||    
T  8412935 tgtccgacaccaagacatgcctaatccaaggaatgtttgtgcttcat 8412889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 52369803 - 52369905
Alignment:
Q  10 ataattctatggaatcatacgtgtcgtgttggggtcggtgttagataccaatgtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttc 109  Q
    ||||||| ||| ||||||| ||||||||| || |||||| |  || ||| | | |||||| ||||| |||||  |||| ||| |||||||||||||||||    
T  52369803 ataattcaatgtaatcataggtgtcgtgtcggtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttc 52369902  T
Q  110 ata 112  Q
    |||    
T  52369903 ata 52369905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 3631755 - 3631796
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgc 106  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||    
T  3631755 tgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 29508522 - 29508567
Alignment:
Q  66 gtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||| ||||| | |||||||||| ||||||||||||||||    
T  29508522 gtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 2408639 - 2408591
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||| ||||||| ||||| |||||||| ||||||| |||||||||||||    
T  2408639 gtgttcgacaccgggacacgcctaatctaaggagtctccgtgcttcata 2408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 8071063 - 8071027
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgt 100  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  8071063 gtgtccgacaccaggacacgcctaatccaaagagtgt 8071027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 11610579 - 11610627
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||| | ||||| ||||||||  ||||||||||||||||||||    
T  11610579 gtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcata 11610627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 41961628 - 41961580
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||  ||||| ||||||||| || |||||||||||||||||    
T  41961628 gtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcata 41961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 16297272 - 16297223
Alignment:
Q  62 gtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  16297272 gtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 11412777 - 11412709
Alignment:
Q  43 gtcggtgttagataccaatgtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||||||| || |||||  |||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  11412777 gtcggtgttggacaccaacatgtgtccgacactaggacatgccttatcctaggagtgtccgtgcttcat 11412709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 42359440 - 42359391
Alignment:
Q  62 gtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  42359440 gtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 40258921 - 40258873
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataa 113  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  40258921 tgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcataa 40258873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 6612150 - 6612112
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtc 101  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  6612150 tgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 10233325 - 10233374
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||||  |||||||  ||||||||||||||||||||    
T  10233325 tgtgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 48415704 - 48415667
Alignment:
Q  75 caggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  48415704 caggacacgcctaatccaaggagtgtccgtgcttcata 48415667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 1704984 - 1704936
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||  |||| |||||||||||||||||||| |||||||||    
T  1704984 gtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcata 1704936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 2218298 - 2218346
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||| |||||| ||||||||  ||||||||||||||||||||    
T  2218298 gtgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcata 2218346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 9828125 - 9828173
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| | ||||||| ||||||||||||||||||||    
T  9828125 gtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 18337399 - 18337447
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||  |||||||||| |||| ||||||||||||||||||||    
T  18337399 gtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcata 18337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 40917830 - 40917878
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| |||| |||||||||||||||    
T  40917830 gtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 1486693 - 1486646
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||| ||||| ||||||||| ||||||||| |||||||||    
T  1486693 gtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 17778623 - 17778670
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||| ||||||||||||||| || ||||| ||||||||||    
T  17778623 gtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 7918197 - 7918155
Alignment:
Q  70 gacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||  |||||||| ||||||||||||||||||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgcttcata 7918155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 112
Target Start/End: Complemental strand, 15449205 - 15449171
Alignment:
Q  78 gacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||||||||| ||||||||||    
T  15449205 gacatgcctaatccaaggagtgtctgtgcttcata 15449171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 21366043 - 21365993
Alignment:
Q  62 gtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||| |||||||||  |||| ||||||||| ||||||||||||||||||||    
T  21366043 gtgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 21365993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 22947806 - 22947848
Alignment:
Q  70 gacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||| ||||| ||||||||| ||||||||||||||||||||    
T  22947806 gacacctggacacgcctaatccgaggagtgtccgtgcttcata 22947848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 15765807 - 15765876
Alignment:
Q  43 gtcggtgttagataccaatgtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||| |||| || | ||||||| |||||  ||||| ||||||||| | ||||||||||||||||||    
T  15765807 gtcggtgtcagatgccgacgtgtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcata 15765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 22515873 - 22515828
Alignment:
Q  67 tccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||  |||| ||||||||| ||||||||||||||||||||    
T  22515873 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 22515828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 6427545 - 6427593
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||  | ||||||||||||||||||    
T  6427545 gtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcata 6427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 6574051 - 6574095
Alignment:
Q  68 ccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||  ||||| ||||||||||||||||| ||||||||||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcata 6574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 10572570 - 10572534
Alignment:
Q  77 ggacatgcctaatccaaggagtgtccgtgcttcataa 113  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  10572570 ggacacgcctaattcaaggagtgtccgtgcttcataa 10572534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 10577724 - 10577676
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||  ||||| |||| |||||||||||||||||||||||||    
T  10577724 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 29144369 - 29144321
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| | ||| ||||||||| | ||||||||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcata 29144321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 32461442 - 32461394
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||  ||||| |||||||||||| |||||||||||||||||    
T  32461442 gtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcata 32461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 37598901 - 37598949
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||   ||||| ||||||||| ||||||||||||||||||||    
T  37598901 gtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcata 37598949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 46940797 - 46940749
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| | ||| ||||||||| |||||||| |||||||||||    
T  46940797 gtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcata 46940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 9778575 - 9778623
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  9778575 gtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 1433528 - 1433577
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  1433528 tgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcata 1433577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 5409820 - 5409772
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  5409820 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 5409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 28155624 - 28155672
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  28155624 gtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcata 28155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 29763178 - 29763130
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  29763178 gtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcata 29763130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 40287350 - 40287306
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttc 109  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  40287350 tgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 21880223 - 21880270
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||||    
T  21880223 tgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcata 21880270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 8842323 - 8842282
Alignment:
Q  69 cgacaccaggacatgcctaatccaaggagtgtccgtgcttca 110  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 598278 - 598326
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| || |||||||||||||||||    
T  598278 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 6490786 - 6490834
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| || |||||| ||||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcata 6490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 30813867 - 30813915
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||| ||| ||| ||||||||| ||||||||||||||||||||    
T  30813867 gtgtccgacatcagaacacgcctaatccgaggagtgtccgtgcttcata 30813915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 32287452 - 32287404
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  32287452 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 43027453 - 43027405
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| | ||||||||||||||||||    
T  43027453 gtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcata 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 43250074 - 43250118
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgctt 108  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||    
T  43250074 gtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 5307331 - 5307374
Alignment:
Q  69 cgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||| |||||| |||||||||||||||||| |||||||||||    
T  5307331 cgacactaggacacgcctaatccaaggagtgtacgtgcttcata 5307374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 7438792 - 7438835
Alignment:
Q  69 cgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||| |||||| ||||||| ||||||||||||||||||||||    
T  7438792 cgacactaggacacgcctaattcaaggagtgtccgtgcttcata 7438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 35862027 - 35862069
Alignment:
Q  70 gacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||    
T  35862027 gacacgaggacacgcctaatccgaggagtgtccgtgcttcata 35862069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 38804540 - 38804490
Alignment:
Q  62 gtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||| || ||||||||||||||| ||||||||  ||||||||||    
T  38804540 gtgtgtccgacgccgggacatgcctaatccgaggagtgtatgtgcttcata 38804490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 24339726 - 24339771
Alignment:
Q  67 tccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||| ||||| ||||||||| ||||||| ||||||||||||    
T  24339726 tccgacaccgggacacgcctaatccgaggagtgcccgtgcttcata 24339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 10230073 - 10230025
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||||| ||| |||| ||||||||||| |||||||||||||    
T  10230073 gtgtcggacaccagaacacgcctgatccaaggagtttccgtgcttcata 10230025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 14729773 - 14729821
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| || |||||| |||||||||||| |||||||    
T  14729773 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcata 14729821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 21138980 - 21138932
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||| || ||||| | ||||||| |||||||||||    
T  21138980 gtgtccgacaccaggacacgcttaatcaagggagtgttcgtgcttcata 21138932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 25822736 - 25822784
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||| | |||||||||||||| |||||||||||||| ||||||    
T  25822736 gtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcata 25822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 29447089 - 29447038
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataat 114  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||||    
T  29447089 tgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcataat 29447038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 36450743 - 36450695
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  36450743 gtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcata 36450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 44067597 - 44067644
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||    
T  44067597 gtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 22652056 - 22652105
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||| ||||| | ||||||| ||||||||||||||||||||    
T  22652056 tgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 29510282 - 29510234
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  29510282 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 29510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 926777 - 926730
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||||||||||| |||||||| | |||| |||||||||||||||||||    
T  926777 gtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 13397622 - 13397669
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||  |||| ||||||| ||||||||||||||||||||||    
T  13397622 tgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcata 13397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 13436954 - 13436911
Alignment:
Q  69 cgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcata 13436911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 14639778 - 14639735
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgctt 108  Q
    ||||||||||| |||||||||||||||||||||| || ||||||    
T  14639778 tgtccgacaccgggacatgcctaatccaaggagtatctgtgctt 14639735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 31557067 - 31557114
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||||||| ||||||||||||| |||||| ||| |||||    
T  31557067 tgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcata 31557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 13009512 - 13009423
Alignment:
Q  22 aatcatacgtgtcgtgttggggtcggtgttagataccaatgtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||| ||||||||| || || ||||| ||| ||| | |  ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  13009512 aatcataagtgtcgtgtcggtgtaggtgtcagacaccgacgcctgtccgacacg-ggacacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 34127215 - 34127173
Alignment:
Q  70 gacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||| |||||  |||||||||||||||||||||||||||||    
T  34127215 gacacctggacacacctaatccaaggagtgtccgtgcttcata 34127173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 4673400 - 4673355
Alignment:
Q  67 tccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||| | ||| ||||||||||||||||||| ||||||||||    
T  4673400 tccgacaccggaacacgcctaatccaaggagtgtctgtgcttcata 4673355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 8343036 - 8343085
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||| ||||| ||||||||| | ||||||| ||||||||||    
T  8343036 tgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcata 8343085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 9383047 - 9383084
Alignment:
Q  75 caggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  9383047 caggacacgcctaatccaagcagtgtccgtgcttcata 9383084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 15816104 - 15816059
Alignment:
Q  67 tccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||| ||||| ||||||||| || |||||||||||||||||    
T  15816104 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 29447524 - 29447573
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||| ||||| | ||||||  ||||||||||||||||||||    
T  29447524 tgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcata 29447573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 8343397 - 8343445
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| | ||||||| ||||||||||    
T  8343397 gtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcata 8343445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 14134769 - 14134817
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||| |||||||||| ||||||| | ||||||||||||| ||||||    
T  14134769 gtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcata 14134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 17751730 - 17751774
Alignment:
Q  68 ccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||| ||||| ||||||||| ||||||||||| ||||||||    
T  17751730 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcata 17751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 17760717 - 17760761
Alignment:
Q  68 ccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||| ||||| ||||||||| ||||||||||| ||||||||    
T  17760717 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcata 17760761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 34451010 - 34450962
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||  ||||| |||| |||||||||||||||||||||||||    
T  34451010 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 34450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 3947750 - 3947699
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataata 115  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  3947750 gtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcataata 3947699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 18513226 - 18513176
Alignment:
Q  62 gtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  18513226 gtgtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcata 18513176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 23292975 - 23292927
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  23292975 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 30982856 - 30982808
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  30982856 gtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 11931362 - 11931409
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||    
T  11931362 tgtccgacaccaggacacacctaatccatggagtgtccgtgcttcata 11931409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 17876237 - 17876284
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||||    
T  17876237 tgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcata 17876284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 22440606 - 22440559
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  22440606 gtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 2626008 - 2625960
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||| ||||||| ||||||| |||||||| |||||||||||||    
T  2626008 gtgtccgacatcaggacacgcctaattcaaggagtatccgtgcttcata 2625960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 20633541 - 20633589
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| ||||||| |||| |||||||||||||||||| |||||||||||    
T  20633541 gtgtcggacaccaagacacgcctaatccaaggagtgttcgtgcttcata 20633589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 24613679 - 24613631
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||||||||| | ||||||| ||||||||||||||||||||    
T  24613679 gtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcata 24613631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 42640594 - 42640642
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||| |||||||||| ||||||||| |||||| |||||||||||||    
T  42640594 gtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcata 42640642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 715593 - 715546
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||  ||||| ||||||||| ||||||||||||||||||||    
T  715593 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 752919 - 752872
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||  ||||| ||||||||| ||||||||||||||||||||    
T  752919 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 752872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 112
Target Start/End: Original strand, 28470448 - 28470483
Alignment:
Q  77 ggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||||| ||||||||||||||||||||    
T  28470448 ggacatgcctaatccgaggagtgtccgtgcttcata 28470483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 28084594 - 28084640
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttca 110  Q
    |||||||||||  ||||| ||||||||| ||||||||||||||||||    
T  28084594 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 30838291 - 30838340
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataa 113  Q
    ||||||||||||| |||| |||||| || |||||||||||||||| ||||    
T  30838291 gtgtccgacaccaagacacgcctaacccgaggagtgtccgtgcttaataa 30838340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 40965341 - 40965390
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataa 113  Q
    ||||||||||||| |||| ||||||||  ||||||||| |||||||||||    
T  40965341 gtgtccgacaccaagacacgcctaatctgaggagtgtcggtgcttcataa 40965390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 53381576 - 53381531
Alignment:
Q  67 tccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||| |||||  |||||||| ||||||||||||||||||||    
T  53381576 tccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 53381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 15029845 - 15029889
Alignment:
Q  68 ccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||| |||||||||||||| ||||||  ||||||||||||    
T  15029845 ccgacaccaagacatgcctaatccgaggagtacccgtgcttcata 15029889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 18966579 - 18966627
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||| | ||| | |||||||| |||||||||||||||||||||    
T  18966579 gtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcata 18966627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 24343583 - 24343631
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||| ||  ||||||||||||||||||||    
T  24343583 gtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcata 24343631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 31385000 - 31385050
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataat 114  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  31385000 gtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcataat 31385050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 31959219 - 31959271
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataata 115  Q
    ||||||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  31959219 tgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataata 31959271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 32978887 - 32978842
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttca 110  Q
    ||||||||||| ||||| | ||||||||||||||||||||||||||    
T  32978887 tgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 21395302 - 21395262
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgt 104  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  21395302 gtgtcggacaccaggacacgcctaatccaaggagtgtccgt 21395262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 28152168 - 28152216
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| |||||||| |||||||||||    
T  28152168 gtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcata 28152216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 4878014 - 4878060
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  4878014 tgtccgacac-aggacacgcctaatccgaggagtgtccgtgcttcata 4878060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 112
Target Start/End: Complemental strand, 8805560 - 8805525
Alignment:
Q  77 ggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8805560 ggacatgcctaatccgaggagtgtccgtgcttcata 8805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 112
Target Start/End: Original strand, 10649371 - 10649406
Alignment:
Q  77 ggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| ||||||||||||||||||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcata 10649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 8389457 - 8389411
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttca 110  Q
    |||||||||||| |||||  |||||||| ||||||||||||||||||    
T  8389457 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 9025494 - 9025448
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttca 110  Q
    |||||||||||| ||||| ||||||||| || |||||||||||||||    
T  9025494 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 9107350 - 9107300
Alignment:
Q  62 gtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||| |||||  |||||||| ||||||| ||||||||||||    
T  9107350 gtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcata 9107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 33419226 - 33419292
Alignment:
Q  46 ggtgttagataccaatgtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| ||| ||||| | |||||| |||||||||||||||||||||||| ||| |  ||||||||||    
T  33419226 ggtgtcagacaccaacgcgtgtccaacaccaggacatgcctaatccaagaagtatttgtgcttcata 33419292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 7248438 - 7248487
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||| ||||| | | ||||| ||||||||||||||||||||    
T  7248438 tgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcata 7248487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 17841579 - 17841530
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||   |||| ||||||||| ||||||||||||||||||||    
T  17841579 tgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 18851081 - 18851048
Alignment:
Q  79 acatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||||| ||||||||||||||||||    
T  18851081 acatgcctaatccaatgagtgtccgtgcttcata 18851048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 7490108 - 7490152
Alignment:
Q  68 ccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| || ||| ||||||||||||| ||||||||||||||||||    
T  7490108 ccgactcccggatatgcctaatccaaagagtgtccgtgcttcata 7490152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 7625186 - 7625234
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| | ||| || ||||||||||||||| |||||||||||    
T  7625186 gtgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcata 7625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 7938170 - 7938218
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||  |||| |||| |||| ||||||||||||||||||||    
T  7938170 gtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcata 7938218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 8365497 - 8365449
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||  ||||| ||||||||| |||||| |||||||||||||    
T  8365497 gtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcata 8365449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 8776957 - 8776909
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||  ||||  |||||||| ||||||||||||||||||||    
T  8776957 gtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcata 8776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 9027237 - 9027285
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| | ||||||||||||||||  ||||||||||    
T  9027237 gtgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcata 9027285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 10770656 - 10770608
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||  || ||||||||||||||  ||||||||||||||||||||    
T  10770656 gtgtccgatgccgggacatgcctaatctgaggagtgtccgtgcttcata 10770608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 16766778 - 16766826
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| | || |||||||||||||||    
T  16766778 gtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcata 16766826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 17327639 - 17327591
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||  ||||| ||||||||| ||||||||||||||||||||    
T  17327639 gtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcata 17327591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 112
Target Start/End: Original strand, 34446661 - 34446689
Alignment:
Q  84 cctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||||||||||||||    
T  34446661 cctaatccaaggagtgtccgtgcttcata 34446689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 34595204 - 34595252
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||| |||||  |||||||| ||||||||||||||||||||    
T  34595204 gtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcata 34595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 10535739 - 10535686
Alignment:
Q  59 aatgtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||| |||||||||||| ||||||||| |||||||| |||||||||||    
T  10535739 aatgtgtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcata 10535686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 37419824 - 37419872
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  37419824 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 2438707 - 2438661
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  2438707 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 26769592 - 26769640
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||  ||||| ||||||||| ||||||||||||||||||||    
T  26769592 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcata 26769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 38117148 - 38117100
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||||||||||    
T  38117148 gtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcata 38117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 112
Target Start/End: Complemental strand, 3444862 - 3444827
Alignment:
Q  77 ggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||||| ||||||||||||||||||||    
T  3444862 ggacatgcctaatccgaggagtgtccgtgcttcata 3444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 112
Target Start/End: Complemental strand, 18255980 - 18255945
Alignment:
Q  77 ggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18255980 ggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 18841001 - 18840954
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  18841001 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 18840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 42832281 - 42832234
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||||||| || ||||| |||||||||||||||||||| ||||||||    
T  42832281 gtgtccgactccgggacacgcctaatccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 112
Target Start/End: Complemental strand, 30717489 - 30717460
Alignment:
Q  83 gcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||||||||||||||||||||    
T  30717489 gcctaatccaaggagtgtccgtgcttcata 30717460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 34993972 - 34993923
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||  ||||| ||||||| |||||||||| |||||||||||    
T  34993972 tgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcata 34993923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 17776666 - 17776714
Alignment:
Q  62 gtgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttca 110  Q
    |||||||||||  | ||||| ||||||||| ||||||||||||||||||    
T  17776666 gtgtgtccgacctcgggacaggcctaatccgaggagtgtccgtgcttca 17776714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 24009365 - 24009413
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||  ||||| |||| |||||||||||||||||||||||||    
T  24009365 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 24009413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 28596539 - 28596587
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||  |||||  |||||||| ||||||||||||||||||||    
T  28596539 gtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 32364800 - 32364756
Alignment:
Q  113 ataagctgttttcgtaaactatcatagagatattatgaacataag 157  Q
    ||||||||||| ||||||||||| ||||||| ||||||| |||||    
T  32364800 ataagctgtttacgtaaactatcttagagatcttatgaaaataag 32364756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 37559047 - 37559095
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| | ||| || |||||| ||||||||||||||||||||    
T  37559047 gtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcata 37559095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 42511371 - 42511323
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||  ||||| | ||||||| ||||||||||||||||||||    
T  42511371 gtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcata 42511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 70348 - 70394
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttca 110  Q
    |||||||||||||||||||||||||||| | |||||| |||||||||    
T  70348 gtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 451 - 402
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataa 113  Q
    |||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  451 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataa 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 8671 - 8719
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  8671 gtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcata 8719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 241675 - 241723
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| ||||||||| || |||||||||||||||||    
T  241675 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 241723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 2436981 - 2437029
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||| |||| ||||||||| |||||||| |||||||||||    
T  2436981 gtgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcata 2437029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 14873592 - 14873640
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||| ||||| ||||| ||||||||| ||||||||||||||||||||    
T  14873592 gtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 31084398 - 31084446
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||  ||||||||||||||| ||||||||||||| ||||||    
T  31084398 gtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcata 31084446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 19820376 - 19820329
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcata 19820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 21191045 - 21190998
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||||||| || ||||| ||||||||| |||||||||||||||||||    
T  21191045 gtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 39268588 - 39268541
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttca 110  Q
    ||||||||||||  ||||| ||||||||| ||||||||||||||||||    
T  39268588 tgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 41995534 - 41995581
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||| ||||| |||||| ||||||||| |||||||||||||||||||    
T  41995534 gtgtcggacacgaggacacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 30502376 - 30502330
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||||||||  |||||||||||||||||||| ||| ||||||||||    
T  30502376 tgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 30542719 - 30542673
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||||||||  |||||||||||||||||||| ||| ||||||||||    
T  30542719 tgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 17088361 - 17088402
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtg 105  Q
    |||||||||||| ||||| ||||||||| |||||||||||||    
T  17088361 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 21542111 - 21542160
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcataa 113  Q
    |||||||||||| ||||| ||| |||||||||| ||||||||| ||||||    
T  21542111 gtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcataa 21542160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 39698625 - 39698670
Alignment:
Q  67 tccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||  |||| ||||||||| ||||||||||||||||||||    
T  39698625 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 39698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 43564950 - 43564999
Alignment:
Q  63 tgtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||| || ||||| ||||||||| || |||||||||||||||||    
T  43564950 tgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcata 43564999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 21522831 - 21522879
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||| |||| ||||| ||||||||||| |||||||||||| |||||    
T  21522831 gtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21522879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 21533397 - 21533445
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||| |||| ||||| ||||||||||| |||||||||||| |||||    
T  21533397 gtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 21576734 - 21576686
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| |||||  ||||| ||||||||| ||||||||||||||||||||    
T  21576734 gtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcata 21576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 30098407 - 30098455
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||| ||||||||||||  |||||||| |||| |||||||||||||||    
T  30098407 gtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcata 30098455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 32766921 - 32766873
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||| | | ||||||  ||||||||||||||||||||    
T  32766921 gtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcata 32766873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 35017113 - 35017161
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||| ||| | ||||| ||||||||| ||||||||||||||||||||    
T  35017113 gtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcata 35017161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 42893430 - 42893478
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||| |||||||   |||||||||| |||||||||    
T  42893430 gtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcata 42893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 43001882 - 43001922
Alignment:
Q  71 acaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||| ||||| ||||||||| |||||||||||||||||||    
T  43001882 acacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 4869 - 4822
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||  ||||| ||||||||| ||||||||||||||||||||    
T  4869 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 4822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 188473 - 188512
Alignment:
Q  67 tccgacaccaggacatgcctaatccaaggagtgtccgtgc 106  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  188473 tccgacaccaggacacgcctaatccgaggagtgtccgtgc 188512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 225246 - 225199
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    |||| ||||||||||||| ||||||| | |||||||||||||||||||    
T  225246 gtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 92893 - 92940
Alignment:
Q  65 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||| |||||| ||||| ||||||||| ||||||||||||||||||||    
T  92893 tgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 13482 - 13523
Alignment:
Q  70 gacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||| ||||||  ||||||||||||||||||||||||||||    
T  13482 gacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 21845 - 21804
Alignment:
Q  70 gacaccaggacatgcctaatccaaggagtgtccgtgcttcat 111  Q
    ||||| ||||||  ||||||||||||||||||||||||||||    
T  21845 gacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 14597 - 14645
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    ||||||||||||  |||| |||||||| ||||||||| |||||||||||    
T  14597 gtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcata 14645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 135312 - 135264
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||||||||| ||||||||  ||| |||| |||||||||||    
T  135312 gtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcata 135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 71806 - 71854
Alignment:
Q  64 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 112  Q
    |||||||||||| ||||| | ||||||| ||||||||| ||||||||||    
T  71806 gtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcata 71854  T

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