View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18078_high_60 (Length: 248)
Name: NF18078_high_60
Description: NF18078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18078_high_60 |
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Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 45650550 - 45650350
Alignment:
| Q |
35 |
atattgtaattgttttataaattgatttacttaaaacagcgaatctataacttactccgtagaagatataaaaactttgtnnnnnnnnnnnnnnntattc |
134 |
Q |
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| T |
45650550 |
atattgtaattgttttataaattgatttacttaaaacagcgaatctataacttactccgtagaagatataaaaactttgtaaaaaaatgaaaaaatattc |
45650451 |
T |
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| Q |
135 |
tgtggaagaaattgacgagaattaaaacaagaaatagtcataataagcaggtaa--tataacaagcatataatttaaattaaaaacgtgatcagacctat |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45650450 |
tgtggaagaaattgacgagaattaaaacaagaaatagtcataataagcaggtaatatataacaagcatataatttaaattaaaaacgtgatcagacctat |
45650351 |
T |
|
| Q |
233 |
g |
233 |
Q |
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| T |
45650350 |
g |
45650350 |
T |
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