View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18078_low_60 (Length: 249)

Name: NF18078_low_60
Description: NF18078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18078_low_60
NF18078_low_60
[»] chr4 (15 HSPs)
chr4 (1-242)||(6624404-6624645)
chr4 (1-219)||(6590035-6590253)
chr4 (1-242)||(6813525-6813766)
chr4 (5-242)||(6750602-6750839)
chr4 (1-234)||(6794195-6794428)
chr4 (5-199)||(6672410-6672604)
chr4 (14-242)||(6535627-6535855)
chr4 (83-244)||(6756298-6756459)
chr4 (16-242)||(6713577-6713803)
chr4 (1-242)||(6648806-6649047)
chr4 (19-219)||(6725699-6725899)
chr4 (1-216)||(6500349-6500564)
chr4 (1-175)||(6833928-6834099)
chr4 (1-242)||(6547878-6548110)
chr4 (1-74)||(8412642-8412715)
[»] scaffold0373 (1 HSPs)
scaffold0373 (1-177)||(11933-12109)
[»] chr8 (2 HSPs)
chr8 (80-126)||(3264525-3264571)
chr8 (78-142)||(7166647-7166711)
[»] chr6 (2 HSPs)
chr6 (86-144)||(5368318-5368376)
chr6 (86-144)||(5423611-5423669)


Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 6624645 - 6624404
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 100  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6624645 tccagtgggtgtagaatctcgtgtggatgctgtgactaagctactcaatatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 6624546  T
Q  101 gtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacag 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6624545 gtgggtaaaacaaccattgccaaagcgatttataatcaaattgggagaaaattcgatggacggagctttcttttgaatataagagaattttgcgagacag 6624446  T
Q  201 atgccaatcatgtttctctgcaacaacaaatactctgtgatg 242  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  6624445 atgccaatcatgtttctctgcaacaacaaatactttgtgatg 6624404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 6590253 - 6590035
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| |||| || ||||||||||||||||||    
T  6590253 tccagtgggtgtagaatctcgtgtggaagctgtgactaagctactaaacatccaaaactcagatgatgttttaattttggggatatggggaatggggggt 6590154  T
Q  101 gtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacag 200  Q
     |||| |||||||||  ||||||||| |||||||||||||||||||| ||||| || ||| ||||||||||| ||||||||||||| || || |||||||    
T  6590153 atggggaaaacaacccttgccaaagcaatttataatcaaattgggagcaaatttgagggaaggagctttcttctgaatataagagagttatgggagacag 6590054  T
Q  201 atgccaatcatgtttctct 219  Q
    || | ||||| ||||||||    
T  6590053 atactaatcaagtttctct 6590035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 6813525 - 6813766
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 100  Q
    |||||||| |||||||||||| |||||| |||||||||| ||||| |||||| ||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  6813525 tccagtgggtgtagaatctcgcgtggaaactgtgactaaactactaaacatcgaaaactcagaagatgttttacttctagggatatggggaatggggggt 6813624  T
Q  101 gtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacag 200  Q
     ||||||||||||||  ||||||||| |||||||||||||||||||| ||||| || ||| ||||||||||| |||| || || ||| |||| |||||||    
T  6813625 atgggtaaaacaacccttgccaaagcaatttataatcaaattgggagcaaatttgagggaaggagctttcttctgaacattagggaactttgggagacag 6813724  T
Q  201 atgccaatcatgtttctctgcaacaacaaatactctgtgatg 242  Q
    || | ||||| |||||||| || ||||||||||| |||||||    
T  6813725 atactaatcaagtttctctacagcaacaaatactttgtgatg 6813766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 6750602 - 6750839
Alignment:
Q  5 gtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggtgtgg 104  Q
    |||| ||||||||||||||||||||||| ||||||||| || ||||||||||| || |||||||| ||  |  |||| ||||||||||||||||||  ||    
T  6750602 gtgggtgtagaatctcgtgtggaagctgcgactaagctccttaacatccaaaaatcagaagatgtgtttatgctagggatatggggaatggggggtacgg 6750701  T
Q  105 gtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacagatgc 204  Q
    |||||||||||| ||||||||| ||||| ||| |||||||||| ||||| || ||| ||||||| ||| || ||||||| |||||||| |||||| || |    
T  6750702 gtaaaacaaccattgccaaagccatttacaatgaaattgggagcaaatttgagggaaggagcttccttatggatataagggaattttgggagacacatac 6750801  T
Q  205 caatcatgtttctctgcaacaacaaatactctgtgatg 242  Q
     ||||| ||||| || || |||||| ||||||||||||    
T  6750802 taatcaagtttcactacagcaacaagtactctgtgatg 6750839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 6794195 - 6794428
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 100  Q
    |||||||| | |||||||||||||||||| || ||||||||| || |||||| ||||||| |||||||| ||| || |||| ||||||||||||||||||    
T  6794195 tccagtgggtttagaatctcgtgtggaagttgcgactaagctgctaaacatcaaaaactcagaagatgtattaattctagggatatggggaatggggggt 6794294  T
Q  101 gtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacag 200  Q
     |||| |||||||||  ||| ||||| ||| |||||||||||||||| ||||| || ||| ||||||| |||||||| || || ||| |||| || ||||    
T  6794295 atgggaaaaacaacccttgctaaagccattcataatcaaattgggagcaaatttgagggaaggagcttccttttgaacattagggaagtttgggacacag 6794394  T
Q  201 atgccaatcatgtttctctgcaacaacaaatact 234  Q
    || | ||||| |||||||| || ||||| |||||    
T  6794395 atactaatcaagtttctctacagcaacagatact 6794428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 6672410 - 6672604
Alignment:
Q  5 gtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggtgtgg 104  Q
    |||| |||||||||| |||||||||||   ||||||||||| |||||||| || || ||||||||||||||| |||| |||||||||||||||||| |||    
T  6672410 gtgggtgtagaatcttgtgtggaagcttccactaagctacttaacatccagaattcagaagatgttttacttctagggatatggggaatggggggtatgg 6672509  T
Q  105 gtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagaca 199  Q
    | || |||| || ||||||||| ||||| |||||||||||||| ||||| || ||| ||||||| ||| ||| |||||| |||||||| ||||||    
T  6672510 gcaagacaaacattgccaaagccatttacaatcaaattgggagcaaatttgagggaaggagcttccttctgattataagggaattttgggagaca 6672604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 6535855 - 6535627
Alignment:
Q  14 gaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggtgtgggtaaaacaa 113  Q
    |||||||||||| ||||||  ||||||||| | |||||||||||| | |||||||| |||||| |||| |||||||||||||||||| | || |||||||    
T  6535855 gaatctcgtgtgcaagctgcaactaagctattaaacatccaaaacgcagaagatgtcttacttctagggatatggggaatggggggtataggcaaaacaa 6535756  T
Q  114 ccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacagatgccaatcatgt 213  Q
    ||| ||||||||| ||||||||| ||||||| || || || || |||  |||||| ||| |||||||||| |||||||| ||||||| | | ||||| ||    
T  6535755 ccattgccaaagccatttataatgaaattggtagcaagtttgatggaaagagcttccttctgaatataagggaattttgggagacaggtactaatcaagt 6535656  T
Q  214 ttctctgcaacaacaaatactctgtgatg 242  Q
    ||| || || |||||| |||| |||||||    
T  6535655 ttcactacagcaacaagtactttgtgatg 6535627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 6756298 - 6756459
Alignment:
Q  83 atatggggaatggggggtgtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataa 182  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||| |||||||| || ||| ||||||| ||| |||||||||    
T  6756298 atatggggaatggggggtatgggtaaaacaaccattgccaaagccatttataatgaaattggaagaaaatttgagggaaggagcttccttctgaatataa 6756397  T
Q  183 gagaattttgcgagacagatgccaatcatgtttctctgcaacaacaaatactctgtgatgct 244  Q
    |||| ||||| ||||||||| | ||||| ||||| || ||||||||  ||||||| ||||||    
T  6756398 gagagttttgggagacagatactaatcaagtttcactacaacaacaggtactctgcgatgct 6756459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 6713577 - 6713803
Alignment:
Q  16 atctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggtgtgggtaaaacaacc 115  Q
    |||||| ||||||| |||||||||  |||| || |||||||| ||  | ||||||||||||||||| || ||||||||||||||  |||| |||||||||    
T  6713577 atctcgagtggaagatgtgactaatttactaaatatccaaaattcaaatgatgttttacttttagggatctggggaatggggggcttgggcaaaacaacc 6713676  T
Q  116 actgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacagatgccaatcatgttt 215  Q
      ||||||||| ||||||||||||||||| |  ||||| || ||| ||||||||||| | || || || ||| |||| ||||||||| | ||||| ||||    
T  6713677 cttgccaaagccatttataatcaaattggtatcaaatttgagggaaggagctttcttctaaacattagggaagtttgggagacagatactaatcaagttt 6713776  T
Q  216 ctctgcaacaacaaatactctgtgatg 242  Q
    |||| || ||||||||||| |||||||    
T  6713777 ctctacagcaacaaatactttgtgatg 6713803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 6648806 - 6649047
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 100  Q
    |||||||| |||| || |||||||||||||||  ||||||||||| ||||||||| | || |||||||||| |||| | || || ||||||||||||||     
T  6648806 tccagtgggtgtacaacctcgtgtggaagctgcaactaagctactaaacatccaatattcagaagatgtttcacttcttgggatctggggaatgggggga 6648905  T
Q  101 gtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacag 200  Q
       || ||||| |||| ||||||||| |||||||||||||||||||  ||||| || ||  ||||||| ||| ||||||||||||||||||| ||||||     
T  6648906 actggaaaaactaccattgccaaagccatttataatcaaattgggaacaaatttgaggggaggagcttccttctgaatataagagaattttgggagacaa 6649005  T
Q  201 atgccaatcatgtttctctgcaacaacaaatactctgtgatg 242  Q
    ||   ||||  |||||||| ||||||||| | || |||||||    
T  6649006 atattaatctagtttctctacaacaacaacttctttgtgatg 6649047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 6725699 - 6725899
Alignment:
Q  19 tcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggtgtgggtaaaacaaccact 118  Q
    ||||||| ||||||  ||||||||| | ||||||||||| || ||||||||||||||| |||| || ||||| |||||||||  |||||||||||||  |    
T  6725699 tcgtgtgcaagctgcaactaagctattgaacatccaaaaatcagaagatgttttacttctagggatttggggtatggggggtacgggtaaaacaaccctt 6725798  T
Q  119 gccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacagatgccaatcatgtttctc 218  Q
    |||||||| ||||||||||||||||| || ||||| || ||| |||||||| || | ||||| || |||||||| |||||| || ||||||  |||||||    
T  6725799 gccaaagccatttataatcaaattggtagcaaatttgagggaaggagctttgttctaaatatcagggaattttgggagacaaataccaatctagtttctc 6725898  T
Q  219 t 219  Q
    |    
T  6725899 t 6725899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 6500564 - 6500349
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 100  Q
    |||||||| | ||||||||||||||||||||| ||||||||| || |||||  ||||| |  ||||||| ||| || |||| ||||||||||||||||||    
T  6500564 tccagtgggtttagaatctcgtgtggaagctgcgactaagctgctaaacataaaaaacacaaaagatgtcttaattctagggatatggggaatggggggt 6500465  T
Q  101 gtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacag 200  Q
      ||| || ||||||| ||||||||| ||||||||||||||||||||  |||| || ||  ||||||| ||| |||||||||| || ||||| || ||||    
T  6500464 acgggcaagacaaccattgccaaagccatttataatcaaattgggagcgaatttgagggtaggagcttccttctgaatataagggagttttgggaaacag 6500365  T
Q  201 atgccaatcatgtttc 216  Q
    || | ||||| |||||    
T  6500364 atactaatcaagtttc 6500349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 6833928 - 6834099
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 100  Q
    |||||||| | ||||||||||||||||  |||||| ||||||| | |||||  |||| ||   ||||||||||||| | || ||||||||||||||||||    
T  6833928 tccagtgggtttagaatctcgtgtggacactgtgattaagctattaaacataaaaaaatc---agatgttttacttcttgggatatggggaatggggggt 6834024  T
Q  101 gtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttg 175  Q
       ||||||||||||| ||||||||| |||||||||||||||||||| ||||| || |||  |||||| ||||||    
T  6834025 acaggtaaaacaaccattgccaaagccatttataatcaaattgggagcaaatttgagggaatgagcttccttttg 6834099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 6548110 - 6547878
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 100  Q
    ||||||||  ||||||||||||||| ||||||  || |||||| | || |||||||| || |||||||||||||||||||| ||||||||||            
T  6548110 tccagtgggagtagaatctcgtgtgcaagctgcaaccaagctattaaagatccaaaagtcagaagatgttttacttttagggatatggggaa-------- 6548019  T
Q  101 gtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaatataagagaattttgcgagacag 200  Q
     |||| ||||||||||  |||||| | ||||||||| ||||||| || || || ||||||  |||||| ||| |||||||||| |||||||| |||||||    
T  6548018 -tgggcaaaacaaccatagccaaatccatttataatgaaattggtagcaagtttgacggaaagagcttccttctgaatataagggaattttgggagacag 6547920  T
Q  201 atgccaatcatgtttctctgcaacaacaaatactctgtgatg 242  Q
     | | ||||| ||||| || || |||||| |||| |||||||    
T  6547919 gtactaatcaagtttcactacagcaacaagtactttgtgatg 6547878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8412642 - 8412715
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttac 74  Q
    |||||| | |||||||||||||||  || |||||||| ||||||| ||||| ||||| || |||||||||||||    
T  8412642 tccagtcggtgtagaatctcgtgtaaaatctgtgactgagctactaaacatgcaaaattcagaagatgttttac 8412715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 12109 - 11933
Alignment:
Q  1 tccagtggttgtagaatctcgtgtggaagctgtgactaagctactcaacatccaaaactccgaagatgttttacttttaggaatatggggaatggggggt 100  Q
    |||||||| | |||||||||||||||||| || ||||||||| || |||||| ||||||| |||||||| ||| || |||| ||||||||||||||||||    
T  12109 tccagtgggtttagaatctcgtgtggaagttgcgactaagctgctaaacatcaaaaactcagaagatgtattaattctagggatatggggaatggggggt 12010  T
Q  101 gtgggtaaaacaaccactgccaaagcgatttataatcaaattgggagaaaattcgacggacggagctttcttttgaa 177  Q
     |||| |||||||||  ||| ||||| ||| |||||||||||||||| ||||| || ||| ||||||| ||||||||    
T  12009 atgggaaaaacaacccttgctaaagccattcataatcaaattgggagcaaatttgagggaaggagcttccttttgaa 11933  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 3264571 - 3264525
Alignment:
Q  80 ggaatatggggaatggggggtgtgggtaaaacaaccactgccaaagc 126  Q
    ||||||||||||||||| ||  |||||||||||||||| ||||||||    
T  3264571 ggaatatggggaatgggtgggttgggtaaaacaaccacagccaaagc 3264525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 7166711 - 7166647
Alignment:
Q  78 taggaatatggggaatggggggtgtgggtaaaacaaccactgccaaagcgatttataatcaaatt 142  Q
    |||| ||||||||||||||  |   ||||||||||||||| |||||||| || ||||||||||||    
T  7166711 tagggatatggggaatgggcaggtcgggtaaaacaaccacagccaaagccatctataatcaaatt 7166647  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 5368318 - 5368376
Alignment:
Q  86 tggggaatggggggtgtgggtaaaacaaccactgccaaagcgatttataatcaaattgg 144  Q
    ||||| |||||||| || ||||||||||||| ||||||||| ||||| ||| |||||||    
T  5368318 tggggtatggggggagttggtaaaacaaccattgccaaagctatttacaataaaattgg 5368376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 5423611 - 5423669
Alignment:
Q  86 tggggaatggggggtgtgggtaaaacaaccactgccaaagcgatttataatcaaattgg 144  Q
    ||||| |||||||| || ||||||||||||| ||||||||| ||||| ||| |||||||    
T  5423611 tggggtatggggggagttggtaaaacaaccattgccaaagctatttacaataaaattgg 5423669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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