View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18079_low_7 (Length: 393)
Name: NF18079_low_7
Description: NF18079
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18079_low_7 |
 |  |
|
| [»] scaffold0021 (4 HSPs) |
 |  |  |
|
| [»] scaffold0247 (1 HSPs) |
 |  |  |
|
| [»] scaffold0269 (1 HSPs) |
 |  |  |
|
| [»] scaffold0028 (2 HSPs) |
 |  |  |
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| [»] scaffold0206 (1 HSPs) |
 |  |  |
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| [»] scaffold0482 (1 HSPs) |
 |  |  |
|
| [»] scaffold0223 (1 HSPs) |
 |  |  |
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| [»] scaffold0040 (2 HSPs) |
 |  |  |
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| [»] scaffold0001 (1 HSPs) |
 |  |  |
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| [»] scaffold0010 (1 HSPs) |
 |  |  |
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| [»] scaffold0053 (2 HSPs) |
 |  |  |
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| [»] scaffold0334 (1 HSPs) |
 |  |  |
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| [»] scaffold0101 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 153; Significance: 5e-81; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 50 - 365
Target Start/End: Original strand, 4306516 - 4306827
Alignment:
| Q |
50 |
tgtgaaatgtgttaaatgaaaaataaagagatgagagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacac |
149 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||| ||| | |||||||| ||| ||||||| |
|
|
| T |
4306516 |
tgtgaaatatgttaaac-aaaaataaagagatgagagaagaaagatcacacaaaagatttatcctagttcaccaaagccagctacttccagttcccacac |
4306614 |
T |
 |
| Q |
150 |
tttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtat |
249 |
Q |
| |
|
|| | |||||||| || | ||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4306615 |
ttcgagtgagattttctactatagtatccaactatcagaaacttatgaatagcactatg--ttgttgatcacaccagatcagtccgattacactctgtat |
4306712 |
T |
 |
| Q |
250 |
tatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagcttt |
349 |
Q |
| |
|
||||||||||| || ||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | |||||| ||| |
|
|
| T |
4306713 |
tatcaacctcagcagacttctacaattattgatcacacaagaaaggttggaacaactctatatcaaactattaagcccaatagacttgaaacctag-ttt |
4306811 |
T |
 |
| Q |
350 |
acactttgtatggtga |
365 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
4306812 |
acactttgtatggtga |
4306827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 9737129 - 9736879
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
9737129 |
acacaggagagttatcctggttcactaaacccggctacttccagtccccacacttcgtgtgagattatccattatagtattcagtttgtagaaacttcta |
9737030 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| ||||||||||||||| |||| | || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
9737029 |
accaacactataaggccttgatcacaccagatcagtctg--tagcccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
9736932 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
9736931 |
ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag |
9736879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 14644482 - 14644732
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
14644482 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
14644581 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
14644582 |
accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
14644679 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
14644680 |
ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag |
14644732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 7593190 - 7592947
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
|||||||||| |||||||| ||||| ||| ||||||||| ||||||||||| | ||||||||||||||||||||| | || || || ||||||||||| |
|
|
| T |
7593190 |
acacaagagagttatcctggttcaccaaacctggctacttccagtccccacacctcgtgtgagattatccattatagttttcttgctaacagaaacttct |
7593091 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||| | ||||||||||||||| |||||| | |||| ||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
7593090 |
gactagcactacaatatcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcatcaggcttatacaattctttgcacactagcaaaag |
7592993 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
7592992 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
7592947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 14634782 - 14635032
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| | | |||||||||| |
|
|
| T |
14634782 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagctggtagaaacttcta |
14634881 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
14634882 |
accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
14634979 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
14634980 |
ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag |
14635032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 33292181 - 33292431
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
33292181 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
33292280 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
33292281 |
accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
33292378 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || ||||||||||||||| |||||||||||||| ||| |||| |
|
|
| T |
33292379 |
ggttggaactcttcctatctcaaactattgagcccaatagacttgagatctag |
33292431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 15947377 - 15947627
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| |||| |||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
15947377 |
acacaggagagttatcctggttcaccaaacccggctacttccagtcaccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
15947476 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
15947477 |
accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
15947574 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| ||| ||| |||| |
|
|
| T |
15947575 |
ggttggaactcttcctatctcaaactattaagcccaatagccttgagatctag |
15947627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 15174724 - 15174481
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| ||||||||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || || |||||||| |
|
|
| T |
15174724 |
acacaggagatttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacaaaaacttct |
15174625 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| || | ||||||||||||||| |||||| |||||| ||||||||||||||||| |||||| || ||||| ||| || || ||| |
|
|
| T |
15174624 |
gactagcactacaagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatataattctttgcacactagcaaaag |
15174527 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
15174526 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
15174481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 279
Target Start/End: Original strand, 19352599 - 19352774
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||| |||| ||| ||||| ||||||||||||||| ||||| ||||||| ||||||||||||||| |||||| || || || ||||||||||||| | | |
|
|
| T |
19352599 |
gagagttatactggttcaccaaattcggctacttccagtcctcacacttcgtgtgagattatccactatagtctcctgctaacagaaacttctgacttgt |
19352698 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
||||||| || |||||||||||||| |||| |||||| ||||||||| ||||||| |||||| |||| ||||| |
|
|
| T |
19352699 |
actataaattcctgatcacaccagatctttccg-ttacaccctgtattatgaacctcatcaggcttctacacttctt |
19352774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 359
Target Start/End: Complemental strand, 32818179 - 32817917
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| |||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
32818179 |
acacaggagagttatcctggttcaccaaacccggctacttccggtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttcta |
32818080 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattct---tgatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||| | || | |||||||||||||||| |||||| ||||||| | | || ||||||||| |
|
|
| T |
32818079 |
accaacactataaggtcttgatcacaccagatcagtctg--taacccctgtattatcaacctccgcaggcttctacaattttttgttttcgcacaagaaa |
32817982 |
T |
 |
| Q |
294 |
ggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgta |
359 |
Q |
| |
|
|||| |||| | |||||| ||||||||||||||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
32817981 |
ggttcgaactttcctatcttaaactattaagcccaatagacttgagatctag-tttacactttgta |
32817917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 365
Target Start/End: Original strand, 11634340 - 11634603
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||| | | |
|
|
| T |
11634340 |
gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaaccaac |
11634439 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaaaggttg |
298 |
Q |
| |
|
||||||| | ||||||||||| ||| ||| | || ||||||||||||||||||| |||||| ||||||||||| | || ||||||||||| |
|
|
| T |
11634440 |
actataacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaaaggttg |
11634537 |
T |
 |
| Q |
299 |
gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga |
365 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||| ||| ||| | || ||||||||||||| |
|
|
| T |
11634538 |
gaa-ttttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga |
11634603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 48711432 - 48711550
Alignment:
| Q |
245 |
tgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagac |
341 |
Q |
| |
|
||||||||||||||||| |||||| || ||||||| |||||||||||||||| ||| ||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
48711432 |
tgtattatcaacctcaacaggcttctataattctttgctttcacacaagaaaggttaaaacttttctatctcaaactattaagcacaatagacttgagac |
48711531 |
T |
 |
| Q |
342 |
ctagctttacactttgtatg |
361 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
48711532 |
ctag-attacactttgtatg |
48711550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 13874568 - 13874492
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt |
174 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| || ||||||| ||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
13874568 |
acacaggagagttatcctggttcacccaatccg-ctacttccagtccccacacttcgtgtgagattatccactatagt |
13874492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 28344200 - 28344139
Alignment:
| Q |
285 |
cacaagaaaggttggaacaattc-tatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
28344200 |
cacaagaaaggctggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
28344139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 336
Target Start/End: Complemental strand, 14777398 - 14777367
Alignment:
| Q |
305 |
ttctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
14777398 |
ttctatctcaaactattaagcccaatagactt |
14777367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 336
Target Start/End: Complemental strand, 15229536 - 15229505
Alignment:
| Q |
305 |
ttctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
15229536 |
ttctatctcaaactattaagcccaatagactt |
15229505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 14777596 - 14777518
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaat-tcggctacttctagtccccacactttgtgtgagattatccattatagt |
174 |
Q |
| |
|
|||||||| ||||||||| ||||| ||| | |||||| |||||| |||||||||||||||||||| |||| |||||| |
|
|
| T |
14777596 |
acacaagatatttatcctagttcacccaatgtgggctacgtctagttcccacactttgtgtgagattttccactatagt |
14777518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 15229734 - 15229656
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaat-tcggctacttctagtccccacactttgtgtgagattatccattatagt |
174 |
Q |
| |
|
|||||||| ||||||||| ||||| ||| | |||||| |||||| |||||||||||||||||||| |||| |||||| |
|
|
| T |
15229734 |
acacaagatatttatcctagttcacccaatgtgggctacgtctagttcccacactttgtgtgagattttccactatagt |
15229656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 48710031 - 48710091
Alignment:
| Q |
117 |
ttcactaaattcggctacttctagtcccc-acactttgtgtgagattatccattatagtat |
176 |
Q |
| |
|
||||| ||| |||| |||||| ||||||| |||||| ||||||||||||||| |||||||| |
|
|
| T |
48710031 |
ttcaccaaactcggatacttccagtcccccacacttcgtgtgagattatccactatagtat |
48710091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 97 - 341
Target Start/End: Original strand, 26906250 - 26906493
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| ||||||||||||| ||||| ||| |||||||||||||||||| || | |||||||||||||||||||| |||| ||||| |||||||||||| |
|
|
| T |
26906250 |
acacacgagatttatcctggttcaccaaaccaggctacttctagtccccatacctcgtgtgagattatccattataatatcttgttaacagaaacttctg |
26906349 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggt |
296 |
Q |
| |
|
| ||| ||||||| || ||| ||||||||||| |||| | |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
26906350 |
actagcactataagttcttggtcacaccagatcagtctg-ttacactctgtattatcaacctcagcagacttttacaattcttgatcacacaagaaaggt |
26906448 |
T |
 |
| Q |
297 |
tggaacaattctatctcaaactattaagcccaatagacttaagac |
341 |
Q |
| |
|
|||||||||||| ||||||||||||| | | ||||||||| |||| |
|
|
| T |
26906449 |
tggaacaattctttctcaaactattatgacaaatagacttgagac |
26906493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 128 - 361
Target Start/End: Complemental strand, 21633732 - 21633500
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||| |||||||| | || |||||||||||| ||| | ||||| | ||| |||||||||| |
|
|
| T |
21633732 |
cggctacgtctagtccccacactttttgtgagattatccactatagtattctactagtagaaacttctgactagcattataaggtcttggtcacaccaga |
21633633 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattcttg--atcacacaagaaaggttggaacaattctatctcaaactattaagc |
325 |
Q |
| |
|
| |||||| ||| ||||||||||||||||| |||||| || | | |||| |||||||||||| |||||||| |||||||||||||||||| || |
|
|
| T |
21633632 |
tcagtccgga-acaa-ctgtattatcaacctcagcaggcttctaaattccttgctttcacacaagaaatgttggaacttttctatctcaaactattatgc |
21633535 |
T |
 |
| Q |
326 |
ccaatagacttaagacctagctttacactttgtatg |
361 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| |
|
|
| T |
21633534 |
ccaatagacttgagacctag-attacactttgtatg |
21633500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 14272022 - 14272272
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
14272022 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
14272121 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || |||| |||| |
|
|
| T |
14272122 |
acaaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaggaaa |
14272219 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
14272220 |
tgttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
14272272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 14281888 - 14282138
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
14281888 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
14281987 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || |||| |||| |
|
|
| T |
14281988 |
acaaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaggaaa |
14282085 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
14282086 |
tgttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
14282138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 325
Target Start/End: Original strand, 28309963 - 28310236
Alignment:
| Q |
40 |
agtgatagtgtgtgaaatgtgttaaatgaaaaataaagagatgagagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttcta |
139 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||| |||||| ||||||| | ||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
28309963 |
agtgatagtgtgtgaagtgtgttaaacaaaaaataa-gagatgggagaagagaaagaacacaagagatttatcctgattcacctaac-cggctacttccg |
28310060 |
T |
 |
| Q |
140 |
gtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatta |
239 |
Q |
| |
|
|| ||||||| ||||| ||||||| ||||||||| || ||||| ||||||| ||||| ||||||| |||||||||||||||||| |||||| ||| |
|
|
| T |
28310061 |
gtttccacactacgtgtgg--ttatccactatagtatcctgctatcaaaaacttccgaataacactataagttgttgatcacaccagatcagtccg-tta |
28310157 |
T |
 |
| Q |
240 |
cactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttgga-acaattctatctcaaactattaagc |
325 |
Q |
| |
|
|| |||||||||| | ||| || |||| ||||||||||| ||| |||||||| | |||| ||||||||||||||||||| |
|
|
| T |
28310158 |
cagtctgtattattacccttaacaggc--------ttcttgatcactcaaaaaaggttgaacacaaccctatctcaaactattaagc |
28310236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 320
Target Start/End: Original strand, 5378428 - 5378654
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
5378428 |
acacaggagaattatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct |
5378527 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaa |
292 |
Q |
| |
|
| ||| ||||||| | ||||||||||||||| |||| | |||||| || |||||| ||||||| || ||| |||||||||| || |||||||| |
|
|
| T |
5378528 |
aactagcactataaggtcttgatcacaccagatcagtctg-ttacaccctatattataaacctcagcagacttctacaattctttgctttcgcacaagaa |
5378626 |
T |
 |
| Q |
293 |
aggttggaacaattctatctcaaactat |
320 |
Q |
| |
|
|||||| |||||||| ||||||||||| |
|
|
| T |
5378627 |
aggttgttacaattctttctcaaactat |
5378654 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 301
Target Start/End: Complemental strand, 30676930 - 30676766
Alignment:
| Q |
139 |
agtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt |
238 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | ||| | ||| |||||||| ||||||| |||||| || |||||||||| |||| |||| | || |
|
|
| T |
30676930 |
agtccccacacttcgtgtgagattatccattacaatattcagctataagaaacttatgaatagcactatatgttcttgatcacacaagatcagtctg-tt |
30676832 |
T |
 |
| Q |
239 |
acactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttggaa |
301 |
Q |
| |
|
||||||||||||||||| ||||| | ||| || ||||||| |||||||||||||||||||| |
|
|
| T |
30676831 |
acactctgtattatcaatctcaacatacttatataattctttgctttcacacaagaaaggttggaa |
30676766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 21919435 - 21919512
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt |
174 |
Q |
| |
|
||||| |||| |||||||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
21919435 |
acacaggagagttatcctgattcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt |
21919512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 15810030 - 15810217
Alignment:
| Q |
139 |
agtccccacactttgtgtgagattatccattatagt-atcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgat |
237 |
Q |
| |
|
||||||||||| | ||||||||||||||| |||| | ||| || || ||||||||||||| ||| ||||||| | ||||||||||||||| |||||| | |
|
|
| T |
15810030 |
agtccccacacctcgtgtgagattatccactataattatcttggtaacagaaacttctgagtagcactataaggtcttgatcacaccagatcagtccg-t |
15810128 |
T |
 |
| Q |
238 |
tacactctgtattatcaacctcaataggcttttacaattc-ttgatc--acacaagaaaggttggaacaattctatctcaaactattaagc |
325 |
Q |
| |
|
||||| ||||||||||||| || | |||| |||||||| |||| | || |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15810129 |
tacac-ctgtattatcaacttcggcatgcttctacaattctttgaaccagcaaaagaaaggttggaa-ttttctatctcaaactattaagc |
15810217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 279
Target Start/End: Original strand, 40999050 - 40999221
Alignment:
| Q |
108 |
ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaacta |
206 |
Q |
| |
|
|||||||| ||||| ||| || | ||||| ||||||||||| | ||||||||||||||| ||||| | || || || | ||||||| ||| ||| |||| |
|
|
| T |
40999050 |
ttatcctggttcaccaaacccgacaacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacggaaacttatgactagcacta |
40999149 |
T |
 |
| Q |
207 |
taatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
||| | ||||||||||||||| ||| | |||||| ||||||||||||||||| || ||| |||||||||| |
|
|
| T |
40999150 |
taaggttttgatcacaccagatcagtttg-ttacaccatgtattatcaacctcaacagacttctacaattctt |
40999221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 345
Target Start/End: Original strand, 3471058 - 3471191
Alignment:
| Q |
214 |
ttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-ta |
309 |
Q |
| |
|
||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||||||| |||| ||| || |
|
|
| T |
3471058 |
ttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttagaactcttccta |
3471155 |
T |
 |
| Q |
310 |
tctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
|||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
3471156 |
tctcaaactattaaacccaatagacttgagatctag |
3471191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 21919580 - 21919626
Alignment:
| Q |
307 |
ctatctcaaactattaagcccaatagacttaagacctagctttacact |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||| |||||||| |
|
|
| T |
21919580 |
ctatctcaaactattaagcccaatagacttgagaactag-tttacact |
21919626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 70 - 364
Target Start/End: Complemental strand, 23623127 - 23622845
Alignment:
| Q |
70 |
aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat |
168 |
Q |
| |
|
|||| ||||||||||||||||| || |||||||||| ||||||||| ||| | || ||||||| || |||||||||||| ||||||||||||||| |
|
|
| T |
23623127 |
aaattaagagatgagagaagaaagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac |
23623029 |
T |
 |
| Q |
169 |
tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt |
268 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| |
|
|
| T |
23623028 |
tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtctg-ttacactctgtattatcaacctcagcaggctt |
23622930 |
T |
 |
| Q |
269 |
ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg |
364 |
Q |
| |
|
||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
23622929 |
ctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg |
23622845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 3242291 - 3242534
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
3242291 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
3242390 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
3242391 |
gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
3242488 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
3242489 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
3242534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 54689917 - 54690160
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
54689917 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
54690016 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
54690017 |
gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
54690114 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
54690115 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
54690160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 54699348 - 54699591
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
54699348 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
54699447 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
54699448 |
gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
54699545 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
54699546 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
54699591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 20884453 - 20884703
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||| | ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
20884453 |
acacaggagagttatcctggttccccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
20884552 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
20884553 |
accaacactataaggttttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
20884650 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
20884651 |
ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
20884703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 26812692 - 26812449
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
26812692 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
26812593 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||| | ||||||||||||||| |||||| | |||| ||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
26812592 |
gactagcactacaatatcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
26812495 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
26812494 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
26812449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 26822159 - 26821916
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
26822159 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
26822060 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||| | ||||||||||||||| |||||| | |||| ||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
26822059 |
gactagcactacaatatcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
26821962 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
26821961 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
26821916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 3918250 - 3918069
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
3918250 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
3918151 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
|| ||| | || ||||| ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
3918150 |
gactagcattacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctt |
3918069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 37059270 - 37059089
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
37059270 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
37059171 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
|| ||| |||| || | ||||||||||||||| |||||| |||||| ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
37059170 |
gactagcactacaagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatacaattctt |
37059089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 359
Target Start/End: Original strand, 50516502 - 50516764
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||| | ||| || ||||||| ||||||||||||| ||||||||||||||| |||||||| ||| ||||| |||| |
|
|
| T |
50516502 |
acacaggagagttatcctggttccccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtattccgttggtagaaatttcta |
50516601 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| | || || |||||||||||||||| ||||| ||||||||||| || | ||||||| |
|
|
| T |
50516602 |
accaacactataaggtcttgatcacaccagatcagtccg-taaccct-tgtattatcaacctcagcaggctgttacaattctttgctttcgctcaagaaa |
50516699 |
T |
 |
| Q |
294 |
ggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgta |
359 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |
|
|
| T |
50516700 |
ggttggaactttcctatctcaaactattaagcccaatagacttgagatcta-ttttacactttgta |
50516764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 16489950 - 16490101
Alignment:
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaac |
302 |
Q |
| |
|
||||||||||||||||||||||| || |||| | |||||||| ||||||||||||||| || ||| ||| |||||||||||||||| ||| || |
|
|
| T |
16489950 |
actataatttgttgatcacaccatatcagtctg-ttacactcagtattatcaacctcagcagacttctacgattcttgatcacacaaaaaa------aaa |
16490042 |
T |
 |
| Q |
303 |
aattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggt |
363 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||| |||| |||| ||||||||||| |
|
|
| T |
16490043 |
aattctatctcaaactattaagcccaataaacttgagatctag--ttacgctttgtatggt |
16490101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 279
Target Start/End: Original strand, 15842902 - 15843083
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| ||||| || ||||| ||| ||||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
15842902 |
acacaggagagttatcttggttcaccaaactcggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct |
15843001 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
|| ||| ||||||| | ||||||||| ||||| |||| | |||||| ||||||||||||||| | |||||| |||||||||| |
|
|
| T |
15843002 |
gactagcactataagatcttgatcacatcagatcagtctg-ttacac-ctgtattatcaacctaagcaggcttctacaattctt |
15843083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 345
Target Start/End: Complemental strand, 11482467 - 11482248
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| | | ||||||| | || ||||||||| | |
|
|
| T |
11482467 |
cggctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaacttctaaccaacactataaggtctttatcacaccata |
11482368 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttggaacaatt-ctatctcaaactattaa |
323 |
Q |
| |
|
| |||||| || | ||||||||||||||||| ||||| |||||||||| || |||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
11482367 |
tcagtccg--taacccctgtattatcaacctcagccggcttctacaattctttgctttcgcacaagaaaggttggaactcttcctatctcaaactattaa |
11482270 |
T |
 |
| Q |
324 |
gcccaatagacttaagacctag |
345 |
Q |
| |
|
||| ||||||||| ||| |||| |
|
|
| T |
11482269 |
gccgaatagacttgagatctag |
11482248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 18125416 - 18125514
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||||||||||||||||| |||| ||||| ||| || || ||| |||||| | ||||||||||||||||||||||||| || || || |||||||| |
|
|
| T |
18125416 |
acacaagagatttatcctggttcattaaatccggttattttcggtctccacacctcgtgtgagattatccattatagtatcctgctaacaaaaacttct |
18125514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 45609598 - 45609499
Alignment:
| Q |
129 |
ggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagat |
228 |
Q |
| |
|
||||||||| ||||| | ||||| || |||||||||||| ||| ||||| |||||||||||| ||||||| |||||| | ||||||||||||||| |
|
|
| T |
45609598 |
ggctacttccagtcctcgcacttcgtatgagattatccactatggtatccaactatcagaaacttttgaatagcactatatgtccttgatcacaccagat |
45609499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 30)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 97 - 361
Target Start/End: Original strand, 42732581 - 42732842
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
|||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| | || |||||||||| |
|
|
| T |
42732581 |
acacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaacttcta |
42732680 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggt |
296 |
Q |
| |
|
| ||| ||||||| | ||||||||||||||| ||||| | || | |||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
42732681 |
actagcactataaggtcttgatcacaccagatcagtcc-agaaccc-ctgtattatcaacctcaacaggcttctacaattcttgatcacacaagaaaggt |
42732778 |
T |
 |
| Q |
297 |
tggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatg |
361 |
Q |
| |
|
|| ||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
42732779 |
tgaaactcttctatctcaaactattaagcccaatagacttgagatctag-tttacactttgtatg |
42732842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 336
Target Start/End: Original strand, 31150670 - 31150868
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
||||||| || |||||||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
31150670 |
cggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga |
31150769 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc |
327 |
Q |
| |
|
| |||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
31150770 |
tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc |
31150859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 5600730 - 5600532
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
||||||| || ||||||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
5600730 |
cggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga |
5600631 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc |
327 |
Q |
| |
|
| |||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
5600630 |
tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc |
5600541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 5610376 - 5610178
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
||||||| || ||||||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
5610376 |
cggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga |
5610277 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc |
327 |
Q |
| |
|
| |||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
5610276 |
tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc |
5610187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 24422461 - 24422218
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
24422461 |
acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
24422362 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
24422361 |
gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
24422264 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
24422263 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
24422218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 30444833 - 30445076
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||||||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
30444833 |
acacaggagagttatcctgattcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
30444932 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| ||||| || |||| ||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
30444933 |
gactagcactacaatttcttgatcacaccagatcagtcc-ataacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
30445030 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
30445031 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
30445076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 11223558 - 11223309
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
|||||| ||| |||||||| ||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| || | |||||||||| |
|
|
| T |
11223558 |
acacaaaagagttatcctggttcaccaaactcggctacttccagtccccacacttcgtgtgagattatccattatagtatacagtggt-agaaacttcta |
11223460 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||| | || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
11223459 |
accaacactataaggtcttgatcacaccagatcagtctg--taacccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
11223362 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
11223361 |
ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
11223309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 24413012 - 24412769
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
24413012 |
acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
24412913 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||| | || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
24412912 |
gactagcactacaatttcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
24412815 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
24412814 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
24412769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 361
Target Start/End: Complemental strand, 26652768 - 26652541
Alignment:
| Q |
131 |
ctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataa |
230 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| ||||| |||||||| | || |||||||||| | ||| ||||| | | |||||||||||| || | |
|
|
| T |
26652768 |
ctacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaacttctaactagcactattaggtcttgatcacaccatatca |
26652669 |
T |
 |
| Q |
231 |
gtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaat |
330 |
Q |
| |
|
|| | | || || ||||||||||||||| | | ||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | |
|
|
| T |
26652668 |
gttc-agaaccct-tgtattatcaacctcggtggacttctacaattcttgatcacacaagaaaggttgtaactcttctatctcaaactattaagcccagt |
26652571 |
T |
 |
| Q |
331 |
agacttaagacctagctttacactttgtatg |
361 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||| |
|
|
| T |
26652570 |
agacttgagatctag-tttacactttgtatg |
26652541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 361
Target Start/End: Complemental strand, 26924353 - 26924126
Alignment:
| Q |
131 |
ctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataa |
230 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| ||||| |||||||| | || |||||||||| | ||| ||||| | | |||||||||||| || | |
|
|
| T |
26924353 |
ctacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaacttctaactagcactattaggtcttgatcacaccatatca |
26924254 |
T |
 |
| Q |
231 |
gtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaat |
330 |
Q |
| |
|
|| | | || || ||||||||||||||| | | ||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | |
|
|
| T |
26924253 |
gttc-agaaccct-tgtattatcaacctcggtggacttctacaattcttgatcacacaagaaaggttgtaactcttctatctcaaactattaagcccagt |
26924156 |
T |
 |
| Q |
331 |
agacttaagacctagctttacactttgtatg |
361 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||| |
|
|
| T |
26924155 |
agacttgagatctag-tttacactttgtatg |
26924126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 30454205 - 30454448
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
30454205 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
30454304 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| | |||| ||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
30454305 |
gactagcactacaatttcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
30454402 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
30454403 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
30454448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 18569223 - 18569042
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
18569223 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
18569124 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
18569123 |
gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctt |
18569042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 33955504 - 33955754
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
33955504 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
33955603 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| ||| || || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
33955604 |
accaacactataaggtcttgatcacaccagatcagtacg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
33955701 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
33955702 |
ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
33955754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 30459263 - 30459506
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
30459263 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
30459362 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| | |||| |||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
30459363 |
gactagcactacaatttcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcggcaggcttatacaattctttgcacactagcaaaag |
30459460 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
30459461 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
30459506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 22489369 - 22489126
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||| | |
|
|
| T |
22489369 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttat |
22489270 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||||| |||||| |||||| ||||||||||||||||| || ||| |||||||| ||| || || ||| |
|
|
| T |
22489269 |
gactagcactataagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcagacttctacaattctttgcacactagcaaaag |
22489172 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
22489171 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
22489126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 20036176 - 20035932
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||| |||||||| ||||| ||| |||||||||| ||||||||||| | |||||||||||||| |||||||| ||| |||||||||| | | |
|
|
| T |
20036176 |
gagagttatcctggttcaccaaacccggctacttccagtccccacacatcatgtgagattatccactatagtatacagttggtagaaacttctaaccaac |
20036077 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttgg |
299 |
Q |
| |
|
||||||| | ||||||||||||||| ||||| || || | || |||||||||||| | |||||| |||||||||| || ||||| ||||||||| |
|
|
| T |
20036076 |
actataaggtcttgatcacaccagatcagtcc-ataac-cactatattatcaaccttagcaggcttctacaattctttgctttcgcacaaaaaaggttgg |
20035979 |
T |
 |
| Q |
300 |
aacaattc-tatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
20035978 |
aactcttcctatctcaaactattaagcccaatagacttgagatctag |
20035932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 96 - 345
Target Start/End: Complemental strand, 20834615 - 20834364
Alignment:
| Q |
96 |
cacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttct |
195 |
Q |
| |
|
|||||| |||| |||||||| ||||| ||| |||||||||| |||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
20834615 |
cacacaggagagttatcctggttcaccaaacccggctacttccagtccccacactccgtgtgagattatccactatagtatgcagttggtagaaacttct |
20834516 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaa |
292 |
Q |
| |
|
| | ||||||| | ||||||| ||||||| ||| || || | |||||| |||||||||| |||||| | |||||||| || |||||||| |
|
|
| T |
20834515 |
aaccaacactataaggtcttgatcataccagatcagttcg--taaccactgtataatcaacctcagcaggcttctccaattctttgctttcgcacaagaa |
20834418 |
T |
 |
| Q |
293 |
aggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
|||||||||| || |||| ||||||||||||||||||||||||| ||| |||| |
|
|
| T |
20834417 |
aggttggaactcttcctatgtcaaactattaagcccaatagacttgagatctag |
20834364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 22448334 - 22448413
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat |
176 |
Q |
| |
|
|||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
22448334 |
acacaagagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat |
22448413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 256
Target Start/End: Original strand, 22118140 - 22118265
Alignment:
| Q |
131 |
ctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagata |
229 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||||||||||||| | || || || |||||||||||||||| ||||||| | ||||||||||||||| |
|
|
| T |
22118140 |
ctacttccagtccccacacctcgtgtgagattatccattatagttgtcttgctaacagaaacttctgaataacactataaggtcttgatcacaccagatc |
22118239 |
T |
 |
| Q |
230 |
agtccgattacactctgtattatcaac |
256 |
Q |
| |
|
|||| | ||||| ||||||||||||| |
|
|
| T |
22118240 |
agtctg-ttacatcctgtattatcaac |
22118265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 13815377 - 13815617
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||||| |||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
13815377 |
acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcatgtgagattatccactatagtattcagttggtagaaacttcta |
13815476 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa |
292 |
Q |
| |
|
| | ||||||| | ||||||||||||||| | || | | || || ||||||||||||||||| |||||| ||||||||||| | || ||||| |
|
|
| T |
13815477 |
accaacactataaggtcttgatcacaccagatcattctg-taaccct-tgtattatcaacctcaacaggcttcttacaattctttgcactagcaaaagaa |
13815574 |
T |
 |
| Q |
293 |
aggttggaacaattctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||| |||| |
|
|
| T |
13815575 |
aggttggaa-ttttctatcttaaactattaagcccaataaactt |
13815617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 365
Target Start/End: Original strand, 24244053 - 24244316
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||| | | |
|
|
| T |
24244053 |
gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatcaac |
24244152 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattcttga---tcacacaagaaaggttg |
298 |
Q |
| |
|
|||| || | ||||||||||| ||| ||| | || ||||||||||||||||||| ||| || ||||||||||| | || ||||||||||| |
|
|
| T |
24244153 |
actacaacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggattcttacaattctttgcactagcaaaagaaaggttg |
24244250 |
T |
 |
| Q |
299 |
gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga |
365 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||| ||| ||| | || ||||||||||||| |
|
|
| T |
24244251 |
gaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga |
24244316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 365
Target Start/End: Original strand, 24290677 - 24290940
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||| | | |
|
|
| T |
24290677 |
gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatcaac |
24290776 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattcttga---tcacacaagaaaggttg |
298 |
Q |
| |
|
|||| || | ||||||||||| ||| ||| | || ||||||||||||||||||| ||| || ||||||||||| | || ||||||||||| |
|
|
| T |
24290777 |
actacaacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggattcttacaattctttgcactagcaaaagaaaggttg |
24290874 |
T |
 |
| Q |
299 |
gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga |
365 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||| ||| ||| | || ||||||||||||| |
|
|
| T |
24290875 |
gaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga |
24290940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 37514863 - 37514943
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatc |
177 |
Q |
| |
|
||||| ||||||||| ||| |||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
37514863 |
acacatgagatttatactggttcatcaaagccggctacttctagtccccacaccttgtgtgagattatccactatagtatc |
37514943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 4636129 - 4635948
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||| || ||||||||||| | ||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
4636129 |
acacatgagagttatcctggttcaccaaacccggctattttcagtccccacacctcacgtgagattatccactatagttgtcttgctaacagaaacttct |
4636030 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
|| || ||||||| | |||||||||||| || |||||| |||||| |||| |||||||||||| |||||| |||||||||| |
|
|
| T |
4636029 |
gaccagcactataagatcttgatcacaccatatcagtccg-ttacac-ctgttttatcaacctcagcaggcttctacaattctt |
4635948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 1693703 - 1693748
Alignment:
| Q |
129 |
ggctacttctagtccccacactttgtgtgagattatccattatagt |
174 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1693703 |
ggctacgtctagtccccacactttgtgtgagattttccattatagt |
1693748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 276
Target Start/End: Complemental strand, 16111037 - 16110887
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagatt---atccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacacc |
224 |
Q |
| |
|
|||||||||| |||||| |||||| |||||||||| ||||||||||||||| | ||||| |||||| ||||| |||||| || ||||||||||| |
|
|
| T |
16111037 |
cggctacttccagtcccgacacttcgtgtgagattaccatccattatagtatcctactatcaaaaactttggaataacactatatgttcttgatcacacc |
16110938 |
T |
 |
| Q |
225 |
agataagtccgattacactctgtattatcaacctcaataggcttttacaatt |
276 |
Q |
| |
|
||| | || | ||||| |||||||||||||| |||| ||| || ||||||| |
|
|
| T |
16110937 |
agaccaatctg-ttacattctgtattatcaacatcaacaggtttatacaatt |
16110887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 22457797 - 22457843
Alignment:
| Q |
307 |
ctatctcaaactattaagcccaatagacttaagacctagctttacact |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
22457797 |
ctatctcaaactattaagcccaatagacttaagatctag-tttacact |
22457843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 17553829 - 17553874
Alignment:
| Q |
129 |
ggctacttctagtccccacactttgtgtgagattatccattatagt |
174 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
17553829 |
ggctacgtctagtccccacactttgtgtgagattttccactatagt |
17553874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 17553934 - 17554025
Alignment:
| Q |
236 |
attacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagact |
335 |
Q |
| |
|
||||||| ||||||| | ||||| | |||| || |||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
17553934 |
attacaccctgtattgttaaccttagtaggtttctacaattcttgagcacacaagaaaggt-----ca----tatctcaaactattaagcccaatagact |
17554024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 22448479 - 22448525
Alignment:
| Q |
307 |
ctatctcaaactattaagcccaatagacttaagacctagctttacact |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||| |||||||| |
|
|
| T |
22448479 |
ctatctcaaactattaagcccaatagactttagatctag-tttacact |
22448525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 113; Significance: 4e-57; HSPs: 26)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 97 - 361
Target Start/End: Original strand, 31575415 - 31575676
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
|||||||||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| | || |||||||||| |
|
|
| T |
31575415 |
acacaagagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaacttcta |
31575514 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggt |
296 |
Q |
| |
|
| ||| ||||||| | |||||||||||| || ||||| | || | ||||||||||||||||| | |||| ||||||||||||||||||||||||||| |
|
|
| T |
31575515 |
actagcactataaggtcttgatcacaccaaatcagtcc-agaaccc-ctgtattatcaacctcagcaagcttctacaattcttgatcacacaagaaaggt |
31575612 |
T |
 |
| Q |
297 |
tggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatg |
361 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
31575613 |
tggaactcttctatctcaaactattaagcccaatagacttgagatctag-tttacactttgtatg |
31575676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 86 - 279
Target Start/End: Complemental strand, 15834145 - 15833953
Alignment:
| Q |
86 |
gaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatc |
185 |
Q |
| |
|
||||||| || |||||||||||||||| || ||||| |||| ||||||||| ||||| ||||| | |||||||||||||||||||||||||||| || | |
|
|
| T |
15834145 |
gaagaattataacacaagagatttatcttggttcaccaaatccggctactttcagtccacacacctcgtgtgagattatccattatagtatcatgctaac |
15834046 |
T |
 |
| Q |
186 |
agaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
||||||||||| ||| ||||||| || |||| || ||||||||||| || |||| | ||||||||||||| ||| |||| || |||||||||| |
|
|
| T |
15834045 |
tgaaacttctgactagcactataagttcttgaccataccagataagttcg-ttactccctgtattatcaacatcagtaggtttctacaattctt |
15833953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 42712182 - 42712432
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
42712182 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
42712281 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
42712282 |
accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
42712379 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
42712380 |
ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
42712432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 12925537 - 12925287
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| || ||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
12925537 |
acacaggagagttatcctggttcacgaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
12925438 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattct---tgatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| ||||||||| | || ||||||||| |
|
|
| T |
12925437 |
accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgttttcgcacaagaaa |
12925340 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
12925339 |
ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
12925287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 20030362 - 20030112
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
|||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| | |||||||| |
|
|
| T |
20030362 |
acacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaacttcta |
20030263 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
20030262 |
accaacactataaggtcttgatcacaccagatcagtccg--taatccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
20030165 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||| ||||||||| ||| |||| |
|
|
| T |
20030164 |
ggttggaactcttcctatctcaaactattaagccaaatagacttgagatctag |
20030112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 336
Target Start/End: Original strand, 7789068 - 7789325
Alignment:
| Q |
83 |
agagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgt |
181 |
Q |
| |
|
||||||||| || ||||| |||| |||| ||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || |
|
|
| T |
7789068 |
agagaagaagaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgc |
7789167 |
T |
 |
| Q |
182 |
tatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttg |
280 |
Q |
| |
|
|| ||||||||||||| ||| |||| ||||| ||||||||||||||| |||| | || ||||||||||||||||||| |||||| |||||||| ||| |
|
|
| T |
7789168 |
taacagaaacttctgactagcactacaatttcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttatacaattctttg |
7789265 |
T |
 |
| Q |
281 |
atca----cacaagaaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
|| || |||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
7789266 |
cacactagcaaaagaaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
7789325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 20045001 - 20044751
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| ||||||| || ||||||||||||| ||||||||||||||| ||||||| ||| |||||||||| |
|
|
| T |
20045001 |
acacatgagagttatcctggttcaccaaacccggctacatccagtccccacacttcgtgtgagattatccacgatagtatacagttggtagaaacttcta |
20044902 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
20044901 |
accaacactataaggtcttgatcacaccagatcagtccg--taacccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
20044804 |
T |
 |
| Q |
294 |
ggttggaacaattc-tatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
20044803 |
ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
20044751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 20714253 - 20714072
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | |||||| |||||||||||||| | || || || ||||||||||| |
|
|
| T |
20714253 |
acacatgagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgacattatccattatagttgtcttgctaacagaaacttct |
20714154 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||||| |||| | |||||| ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
20714153 |
gactagcactataagatcttgatcacaccagatcagtctg-ttacac-ctgtattatcaacctcagcaggcttctacaattctt |
20714072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 365
Target Start/End: Original strand, 18883164 - 18883433
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| ||||| |||| |
|
|
| T |
18883164 |
acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaaattcta |
18883263 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa |
292 |
Q |
| |
|
| | ||||||| | ||||||||||||||| ||| || ||| ||||||||||||||||||| |||||| ||||||||||| | || ||||| |
|
|
| T |
18883264 |
accaacactataaagtcttgatcacaccagatcagttcg--taccctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaa |
18883361 |
T |
 |
| Q |
293 |
aggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga |
365 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||| ||| ||| | || ||||||||||||| |
|
|
| T |
18883362 |
aggttggaa-ttttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga |
18883433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 365
Target Start/End: Original strand, 18143433 - 18143702
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| ||||| || ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||| || ||| | |||||||| |
|
|
| T |
18143433 |
acacaggagagttatcttggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagcattcagttggtaaaaacttcta |
18143532 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa |
292 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||| | | || || |||||||||||||||| ||||||| ||||||||||| | || ||||| |
|
|
| T |
18143533 |
accaacactataaggtcttgatcacaccagatcagtctg-taaccct-tgtattatcaacctcagtaggcttcttacaattctttgcactagcaaaagaa |
18143630 |
T |
 |
| Q |
293 |
aggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga |
365 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| ||| ||| || || ||||||||||||| |
|
|
| T |
18143631 |
aggttggaa-ttttctatctcaaactattaagcccaatagacttgagaactaaattcacgctttgtatggtga |
18143702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 25051067 - 25051307
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
|||||||||| ||||| || ||||| ||| ||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
25051067 |
acacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttcta |
25051166 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa |
292 |
Q |
| |
|
| | |||||||| | ||||||||||||||| |||| | || ||||||||||||||||||| |||||| ||||||||||| | || ||||| |
|
|
| T |
25051167 |
accaacactataatgtcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaa |
25051264 |
T |
 |
| Q |
293 |
aggttggaacaattctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
25051265 |
aggttggaa-ttttctatctcaaactattaagcccaatatactt |
25051307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 365
Target Start/End: Complemental strand, 18252006 - 18251743
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||| |||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||| | | |
|
|
| T |
18252006 |
gagagttatcctgattcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaaccaac |
18251907 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaaaggttg |
298 |
Q |
| |
|
||||||| | ||||||||||| ||| ||| | || ||||||||||||||||||| ||| || ||||||||||| | || ||||||||||| |
|
|
| T |
18251906 |
actataacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggattcttacaattctttgcactagcaaaagaaaggttg |
18251809 |
T |
 |
| Q |
299 |
gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga |
365 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||| ||| ||| | || ||||||||||||| |
|
|
| T |
18251808 |
gaa-ttttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga |
18251743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 25037030 - 25037270
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
|||||||||| ||||| || ||||| ||| ||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
25037030 |
acacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttcta |
25037129 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa |
292 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||| | || ||||||||||||||||||| |||||| ||||||||||| | || ||||| |
|
|
| T |
25037130 |
accaacactataaagtcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaa |
25037227 |
T |
 |
| Q |
293 |
aggttggaacaattctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
25037228 |
aggttggaa-ttttctatctcaaactattaagcccaatatactt |
25037270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 4843732 - 4843805
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat |
176 |
Q |
| |
|
|||| |||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
4843732 |
gagagttatcctggttcactaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat |
4843805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 139 - 345
Target Start/End: Complemental strand, 12767772 - 12767564
Alignment:
| Q |
139 |
agtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt |
238 |
Q |
| |
|
|||||||||| || ||||||||||||||| |||||||| ||| |||||||||| | | ||||||| | ||||||||||||||| |||||| | |
|
|
| T |
12767772 |
agtccccacatttcgtgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtccg--t |
12767675 |
T |
 |
| Q |
239 |
acactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-tatctcaaactattaagcccaatagac |
334 |
Q |
| |
|
| | ||||||||||||||||| |||||| |||||||||| || |||||||||||||||||| ||| |||||||||||||||||| |||||||| |
|
|
| T |
12767674 |
aacccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttggaactcttcctatctcaaactattaagctcaatagac |
12767575 |
T |
 |
| Q |
335 |
ttaagacctag |
345 |
Q |
| |
|
|| ||| |||| |
|
|
| T |
12767574 |
ttgagatctag |
12767564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 18233104 - 18233031
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat |
176 |
Q |
| |
|
|||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
18233104 |
gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat |
18233031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 18242555 - 18242482
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat |
176 |
Q |
| |
|
|||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
18242555 |
gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat |
18242482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 12915642 - 12915563
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat |
176 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
12915642 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtat |
12915563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 33592138 - 33592215
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt |
174 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
33592138 |
acacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt |
33592215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 33601777 - 33601854
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt |
174 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
33601777 |
acacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt |
33601854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 24096079 - 24096217
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtcccc-acactttgtgtgagattatccattatagtatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| ||||||||| ||| ||||| ||| ||| ||||||| ||||||| |||| | ||||||||||||||| ||||||||| || || || |||||| | |
|
|
| T |
24096079 |
acacaggagatttattctggttcaccaaactcgactacttccagtcccccacacctcgtgtgagattatccactatagtatcttgctaacataaactttt |
24096178 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtcc |
234 |
Q |
| |
|
|| ||| |||| || || ||||| |||||| || ||||| |
|
|
| T |
24096179 |
gactagcactacaagttcttgattacaccatatcagtcc |
24096217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 24634117 - 24634014
Alignment:
| Q |
131 |
ctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataa |
230 |
Q |
| |
|
||||||| ||||||||||||| |||||| |||||||| |||||||| | || |||||||||| | ||| ||||||| | ||||||||||||||| | |
|
|
| T |
24634117 |
ctacttccagtccccacacttcgtgtgatattatccactatagtattcagctagtagaaacttctaactagcactataaggtcttgatcacaccagatca |
24634018 |
T |
 |
| Q |
231 |
gtcc |
234 |
Q |
| |
|
|||| |
|
|
| T |
24634017 |
gtcc |
24634014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 18232917 - 18232841
Alignment:
| Q |
288 |
aagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga |
365 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||| | || ||||||||||||| |
|
|
| T |
18232917 |
aagaaaggttggaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga |
18232841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 18242368 - 18242292
Alignment:
| Q |
288 |
aagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga |
365 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||| | || ||||||||||||| |
|
|
| T |
18242368 |
aagaaaggttggaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga |
18242292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 42896184 - 42896229
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatag |
173 |
Q |
| |
|
|||||||||| |||| |||||||| ||||||||||||||| ||||| |
|
|
| T |
42896184 |
cggctacttccagtctccacacttcgtgtgagattatccactatag |
42896229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 4843921 - 4843968
Alignment:
| Q |
288 |
aagaaaggttggaacaattctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
4843921 |
aagaaaggttggaatt-ttctatctcaaactattaaggccaatagactt |
4843968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 20)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 70 - 364
Target Start/End: Complemental strand, 54624863 - 54624581
Alignment:
| Q |
70 |
aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat |
168 |
Q |
| |
|
|||| ||||||||||||||||| || |||||||||| ||||||||| ||| | || ||||||| || |||||||||||| ||||||||||||||| |
|
|
| T |
54624863 |
aaattaagagatgagagaagaaagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac |
54624765 |
T |
 |
| Q |
169 |
tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt |
268 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |||||||| ||||||||| ||||||| |||| | |||||||||||||||||||||||| |||||| |
|
|
| T |
54624764 |
tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcataccagatcagtctg-ttacactctgtattatcaacctcagcaggctt |
54624666 |
T |
 |
| Q |
269 |
ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg |
364 |
Q |
| |
|
||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
54624665 |
ctacgattcttgatcacacaagaaa---------agatctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg |
54624581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 70 - 336
Target Start/End: Original strand, 17529838 - 17530094
Alignment:
| Q |
70 |
aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat |
168 |
Q |
| |
|
|||| |||||||||||||||| || |||||||||| ||||||||| ||| | || ||||||| || |||||||||||| ||||||||||||||| |
|
|
| T |
17529838 |
aaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac |
17529936 |
T |
 |
| Q |
169 |
tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt |
268 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
17529937 |
tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtccg-ttacactctgtattatcaacctcagcaggctt |
17530035 |
T |
 |
| Q |
269 |
ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
17530036 |
ctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagactt |
17530094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 68 - 293
Target Start/End: Complemental strand, 32878080 - 32877856
Alignment:
| Q |
68 |
aaaaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatcc |
166 |
Q |
| |
|
|||||| |||||||||||||||| || |||||||||| ||||||||| ||| | || ||||||| || |||||||||||| |||||||||||||| |
|
|
| T |
32878080 |
aaaaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatcc |
32877982 |
T |
 |
| Q |
167 |
attatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggc |
266 |
Q |
| |
|
| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||| |
|
|
| T |
32877981 |
actatagtatcatgctatcataaacttctgaataacactataatttgttgatcacaccagatcagtctg-ttacactctgtattatcaacctcagcaggc |
32877883 |
T |
 |
| Q |
267 |
ttttacaattcttgatcacacaagaaa |
293 |
Q |
| |
|
|| ||| |||||||||||||||||||| |
|
|
| T |
32877882 |
ttctacgattcttgatcacacaagaaa |
32877856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 48978816 - 48978622
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
||||||| || |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
48978816 |
cggctacgtccagtccccacactacgtgtgagattatccactatagtatcc----atcagaaacttctgaatagcactataatatgttgatcacaccaga |
48978721 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc |
327 |
Q |
| |
|
| |||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
48978720 |
tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc |
48978631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 48988356 - 48988162
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
||||||| || |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
48988356 |
cggctacgtccagtccccacactacgtgtgagattatccactatagtatcc----atcagaaacttctgaatagcactataatatgttgatcacaccaga |
48988261 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc |
327 |
Q |
| |
|
| |||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
48988260 |
tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc |
48988171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 336
Target Start/End: Complemental strand, 19389002 - 19388712
Alignment:
| Q |
41 |
gtgatagtgtgtgaaatgtgttaaatgaaaaataaagagatgagagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctag |
140 |
Q |
| |
|
||||||||||||||| |||||||| | |||| ||| ||||| ||||||||| || ||||||||| ||||||||| ||||| ||| ||||||||||| || |
|
|
| T |
19389002 |
gtgatagtgtgtgaagtgtgttaagttaaaattaa-gagataagagaagaaagagaacacaagagttttatcctggttcaccaaaatcggctacttcaag |
19388904 |
T |
 |
| Q |
141 |
tccccacactttgtgtgagattatccattatagta-tcatgt-tatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt |
238 |
Q |
| |
|
||||||||||| ||||||||||||| | ||||||| ||| | ||||| |||||||||||||| ||||||| |||||||| |||||| || |||| |||| |
|
|
| T |
19388903 |
tccccacacttcgtgtgagattatcgactatagtattcagctatatcataaacttctgaatagcactataagttgttgatgacaccatatcagtctgatt |
19388804 |
T |
 |
| Q |
239 |
acactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaagg-ttggaacaattc-tatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
|||| |||||||| | ||||| |||| ||| ||||||||||||||||| ||| ||||| || |||||||||||| ||| || ||||||||| |
|
|
| T |
19388803 |
gcactatgtattattatcctcagcaggc--------ttcatgatcacacaagaaaggtttgaaacaactcttatctcaaactactaatcctaatagactt |
19388712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 24794550 - 24794793
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
24794550 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
24794649 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
24794650 |
gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
24794747 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
24794748 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
24794793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 28367657 - 28367900
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
28367657 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
28367756 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||| | ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
28367757 |
gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
28367854 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
28367855 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
28367900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 28375475 - 28375718
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
28375475 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
28375574 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||| | ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
28375575 |
gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
28375672 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
28375673 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
28375718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 28383297 - 28383540
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
28383297 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
28383396 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||| | ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
28383397 |
gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
28383494 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
28383495 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
28383540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 28351724 - 28351967
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||| ||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
28351724 |
acacaggagagttatgctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
28351823 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||| | ||||||||||||||| |||||| || ||||||||||||||||| | |||||| |||||||| ||| || || ||| |
|
|
| T |
28351824 |
gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaaccttagcaggcttatacaattctttgcacactagcaaaag |
28351921 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
28351922 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
28351967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 5385873 - 5385623
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat-catgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| || | || |||||||||| |
|
|
| T |
5385873 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagctgat-agaaacttct |
5385775 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaa |
292 |
Q |
| |
|
| | ||||||| | ||||||||||||||| ||| | || | |||||| |||||||||| |||||| |||||||||| || |||||||| |
|
|
| T |
5385774 |
aaccaacactataaggtcttgatcacaccagatcagtatg--taaccactgtatcatcaacctcagcaggcttctacaattctttgctttcgcacaagaa |
5385677 |
T |
 |
| Q |
293 |
aggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
5385676 |
aggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
5385623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 279
Target Start/End: Original strand, 38529212 - 38529362
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccag |
226 |
Q |
| |
|
|||||||||| ||| ||||||| | ||||||||||||||| ||||| | || || || |||||| |||||| ||| ||||||| | ||||||||||||| |
|
|
| T |
38529212 |
cggctacttccagtgcccacacctcgtgtgagattatccactatagttgtcttgctaacagaaatttctgactagcactataagatcttgatcacaccag |
38529311 |
T |
 |
| Q |
227 |
ataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
|| |||| | ||||||| |||||||||||||||| ||||||| |||||||||| |
|
|
| T |
38529312 |
atgagtctg-ttacact-tgtattatcaacctcagtaggcttctacaattctt |
38529362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 87 - 345
Target Start/End: Original strand, 13328272 - 13328532
Alignment:
| Q |
87 |
aagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatca |
186 |
Q |
| |
|
|||||| || ||||| |||| ||||| || ||||| ||| || ||||||| ||||||||||||| ||||||||||||||| |||||||| ||| | |
|
|
| T |
13328272 |
aagaataataacacaggagagttatcttggttcaccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatacagttggta |
13328371 |
T |
 |
| Q |
187 |
gaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatc |
283 |
Q |
| |
|
||||||||| | | ||||| | | ||||||||||||||| |||||| | || || |||||||||||||||| | |||| |||||||||| || |
|
|
| T |
13328372 |
gaaacttctaaccaacactattaggtcttgatcacaccagatcagtccg-taaccct-tgtattatcaacctcagcaagcttctacaattctttgctttc |
13328469 |
T |
 |
| Q |
284 |
acacaagaaaggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||||| |||| ||||||| ||| |||| |
|
|
| T |
13328470 |
gcacaagaaaggttggaactcttcctatctcaaactattaatcccagtagacttgagatctag |
13328532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 128 - 345
Target Start/End: Original strand, 46305609 - 46305827
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
|||||||||| ||||||||||||| || |||||||||||| | |||||| ||| |||||||||| | | ||||||| | |||||||||||||| |
|
|
| T |
46305609 |
cggctacttccagtccccacacttcgt-tgagattatccactttagtatacagttggtagaaacttctaaccaacactataaggtcttgatcacaccaga |
46305707 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-tatctcaaactattaa |
323 |
Q |
| |
|
| |||| | || | ||||||||||||||||| |||||| |||||||||| || |||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
46305708 |
tcagtctg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttggaactcttcctatctcaaactattaa |
46305805 |
T |
 |
| Q |
324 |
gcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||||||| ||| |||| |
|
|
| T |
46305806 |
gcccaatagacttgagatctag |
46305827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 334
Target Start/End: Complemental strand, 4951777 - 4951537
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattata-gtatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| ||||| || ||||| ||| ||| ||||||| ||||| ||||| | ||||||||||||||| |||| | || || || |||||| |||| |
|
|
| T |
4951777 |
acacatgagagttatcttggttcaccaaactcgactacttcaagtcctcacacctcgtgtgagattatccactatatttgtcttgctaacagaaatttct |
4951678 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacac------aa |
289 |
Q |
| |
|
|| ||| |||| || | ||| ||||||||||| |||| | |||||| |||||||||||||||||| || ||| |||||||||| | ||||| || |
|
|
| T |
4951677 |
gactagcactacaaggtattggtcacaccagatcagtctg-ttacac-ctgtattatcaacctcaacagccttctacaattcttta-cacactagcaaaa |
4951581 |
T |
 |
| Q |
290 |
gaaaggttggaacaattctatctcaaactattaagcccaatagac |
334 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||| ||||||| |
|
|
| T |
4951580 |
gaaaggtt-gaaattttctatctcaaactattaagccaaatagac |
4951537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 345
Target Start/End: Complemental strand, 23487182 - 23486974
Alignment:
| Q |
139 |
agtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt |
238 |
Q |
| |
|
|||||||||| || ||||||||||||||| |||||||| ||| |||||||||| | | ||||||| | ||||||||||||||| |||| | | |
|
|
| T |
23487182 |
agtccccacatttcgtgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtctg-ta |
23487084 |
T |
 |
| Q |
239 |
acactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-tatctcaaactattaagcccaatagac |
334 |
Q |
| |
|
|| || |||||||||||||||| |||||| |||||||||| | |||||||||| ||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
23487083 |
accct-tgtattatcaacctcagcaggcttctacaattctttgcttttgcacaagaaagcttggaactcttcctatctcaaactattaagcccaatagac |
23486985 |
T |
 |
| Q |
335 |
ttaagacctag |
345 |
Q |
| |
|
|| ||| |||| |
|
|
| T |
23486984 |
ttgagatctag |
23486974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 4361520 - 4361618
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||||||||||||||||| |||| ||||| ||| || || ||| |||||| | ||||||||||||||||||||||||| || || || |||||||| |
|
|
| T |
4361520 |
acacaagagatttatcctggttcattaaatccggttattttcggtctccacacctcgtgtgagattatccattatagtatcctgctaacaaaaacttct |
4361618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 320
Target Start/End: Original strand, 7784100 - 7784237
Alignment:
| Q |
185 |
cagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---ga |
281 |
Q |
| |
|
||||||||| ||| || ||||||| | ||||||||||||||| |||| | |||||| ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
7784100 |
cagaaacttatgactaacactataaggtcttgatcacaccagatcagtctg-ttacaccctgtattatcaacctcagcaggcttctacaattcttttcct |
7784198 |
T |
 |
| Q |
282 |
tcacacaagaaaggttggaacaattctatctcaaactat |
320 |
Q |
| |
|
|| ||||||||||||| |||||||| ||||||||||| |
|
|
| T |
7784199 |
tcctacaagaaaggttgttacaattctttctcaaactat |
7784237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 336
Target Start/End: Original strand, 17535002 - 17535033
Alignment:
| Q |
305 |
ttctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
17535002 |
ttctatctcaaactattaagcccaatagactt |
17535033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 109; Significance: 1e-54; HSPs: 4)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 70 - 364
Target Start/End: Complemental strand, 100191 - 99909
Alignment:
| Q |
70 |
aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat |
168 |
Q |
| |
|
|||| |||||||||||||||| || |||||||||| ||||||||| ||| | || |||||| || |||||||||||| |||||||||||||||| |
|
|
| T |
100191 |
aaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctatgtccagtccccacactacgtgtgagattatccat |
100093 |
T |
 |
| Q |
169 |
tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt |
268 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |||||||| |||||||||||||| || |||| | ||||||||||||||||||||||||| | |||| |
|
|
| T |
100092 |
tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaaatcagtctg-ttacactctgtattatcaacctcaacaagctt |
99994 |
T |
 |
| Q |
269 |
ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg |
364 |
Q |
| |
|
|| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
99993 |
ctatgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg |
99909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 345
Target Start/End: Complemental strand, 143235 - 143102
Alignment:
| Q |
214 |
ttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-ta |
309 |
Q |
| |
|
||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || |||||||||||||||||| ||| || |
|
|
| T |
143235 |
ttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttggaactcttccta |
143138 |
T |
 |
| Q |
310 |
tctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
143137 |
tctcaaactattaagcccaatagacttgagatctag |
143102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 124230 - 124050
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| |||| |||| | | |||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
124230 |
acacaggagagttatcctggttcatcaaatcctgttacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
124131 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
124130 |
accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctt |
124050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 180889 - 180832
Alignment:
| Q |
305 |
ttctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
180889 |
ttctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg |
180832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 1800643 - 1800445
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
||||||| || |||||||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
1800643 |
cggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga |
1800544 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc |
327 |
Q |
| |
|
| |||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
1800543 |
tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc |
1800454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 70 - 336
Target Start/End: Complemental strand, 22632610 - 22632354
Alignment:
| Q |
70 |
aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat |
168 |
Q |
| |
|
|||| |||||||||||||||| || |||||||||| ||||||||| ||| | || ||||||| || |||||||||||| ||||||||||||||| |
|
|
| T |
22632610 |
aaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac |
22632512 |
T |
 |
| Q |
169 |
tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt |
268 |
Q |
| |
|
||||||||| || |||||||||||||||| || |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
22632511 |
tatagtatcctgctatcagaaacttctgactaacactataatatgttgatcacaccagatcagtccg-ttacactctgtattatcaacctcagcaggctt |
22632413 |
T |
 |
| Q |
269 |
ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
22632412 |
ctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagactt |
22632354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 1791145 - 1790951
Alignment:
| Q |
128 |
cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga |
227 |
Q |
| |
|
||||||| || |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
1791145 |
cggctacgtccagtccccacactacgtgtgagattatccactatagtatcc----atcagaaacttctgaatagcactataatatgttgatcacaccaga |
1791050 |
T |
 |
| Q |
228 |
taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc |
327 |
Q |
| |
|
| |||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
1791049 |
tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc |
1790960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 35877693 - 35877449
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| | | |
|
|
| T |
35877693 |
gagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaac |
35877594 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttgg |
299 |
Q |
| |
|
||||||| | ||||||||||||||| ||| || || | ||||||||||||||||| |||||| |||||||||| || ||||||||||||||| |
|
|
| T |
35877593 |
actataaggtcttgatcacaccagatcagttcg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttgg |
35877496 |
T |
 |
| Q |
300 |
aacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
35877495 |
aactcttcctatctcaaactattaagcccaatagacttgagatctag |
35877449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 35885182 - 35884938
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| | | |
|
|
| T |
35885182 |
gagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaac |
35885083 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttgg |
299 |
Q |
| |
|
||||||| | ||||||||||||||| ||| || || | ||||||||||||||||| |||||| |||||||||| || ||||||||||||||| |
|
|
| T |
35885082 |
actataaggtcttgatcacaccagatcagttcg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttgg |
35884985 |
T |
 |
| Q |
300 |
aacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
35884984 |
aactcttcctatctcaaactattaagcccaatagacttgagatctag |
35884938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 36724895 - 36724651
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| | | |
|
|
| T |
36724895 |
gagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaac |
36724796 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttgg |
299 |
Q |
| |
|
||||||| | ||||||||||||||| ||| || || | ||||||||||||||||| |||||| |||||||||| || ||||||||||||||| |
|
|
| T |
36724795 |
actataaggtcttgatcacaccagatcagttcg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttgg |
36724698 |
T |
 |
| Q |
300 |
aacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
36724697 |
aactcttcctatctcaaactattaagcccaatagacttgagatctag |
36724651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 279
Target Start/End: Original strand, 31710470 - 31710651
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| ||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
31710470 |
acacatgagagttatccttgttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct |
31710569 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||||| |||||| |||||| ||||||||||||||||| || ||| |||||||||| |
|
|
| T |
31710570 |
gactagcactataagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcagacttctacaattctt |
31710651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 279
Target Start/End: Original strand, 24022752 - 24022927
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagta-tcatgttatcagaaacttctgaatag |
201 |
Q |
| |
|
|||| ||||||| ||||| ||| |||||||||| | | ||||||| | ||||||||||||||| |||||| || || || ||||||||||||| ||| |
|
|
| T |
24022752 |
gagagttatcctcgttcaccaaacccggctacttccaattcccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctgactag |
24022851 |
T |
 |
| Q |
202 |
aactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
||||||| | ||||||||||||||| |||||| |||||| |||||||||||||||||| |||||| |||||||||| |
|
|
| T |
24022852 |
cactataagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcaacaggcttctacaattctt |
24022927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 3397106 - 3396856
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| ||||| || ||||| ||| | |||||||||||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
3397106 |
acacaggagagttatcatggttcaccaaacccagctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaacttcta |
3397007 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | |||||||||||||||| || ||| || ||||||| || ||||||||| |
|
|
| T |
3397006 |
accaacactataaggtcttgatcacaccagatcagtccg--taaccattgtattatcaacctcagcagacttctaaaattctttgctttcgcacaagaaa |
3396909 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
3396908 |
ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
3396856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 14273388 - 14273146
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| ||||||||| |||| |||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
14273388 |
acacacgagaattatcctggttcaccaaacccggctactttcagtctccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct |
14273289 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| ||||||| | || ||||||||| || |||| | |||||| || |||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
14273288 |
gactagcactataagatcttaatcacaccatatcagtctg-ttacac-ctatattatcaacctcagcaggcttctacaattctttgcacactagcaaaag |
14273191 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
||| ||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
14273190 |
aaatgttggaa-ttttctatcttaaactattaagcccaatagactt |
14273146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 16446736 - 16446668
Alignment:
| Q |
108 |
ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat |
176 |
Q |
| |
|
|||||||| ||||||||| || |||||| |||||||||| || ||||||||||||||| |||||||| |
|
|
| T |
16446736 |
ttatcctggatcactaaatccgactactttcagtccccacatttcgtgtgagattatccactatagtat |
16446668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0247 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0247
Description:
Target: scaffold0247; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 130 - 363
Target Start/End: Complemental strand, 24741 - 24520
Alignment:
| Q |
130 |
gctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagata |
229 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
24741 |
gctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatc |
24642 |
T |
 |
| Q |
230 |
agtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaa |
329 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||| | |||||| |||||||||||| ||||| |
|
|
| T |
24641 |
agtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacaca---------ggaaaagttctatatcaaactattaaacccaa |
24552 |
T |
 |
| Q |
330 |
tagacttaagacctagctttacactttgtatggt |
363 |
Q |
| |
|
||||||| ||| |||| |||||||||||||||| |
|
|
| T |
24551 |
tagacttgagatctag--ttacactttgtatggt |
24520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0269 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0269
Description:
Target: scaffold0269; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 70 - 282
Target Start/End: Original strand, 14791 - 15002
Alignment:
| Q |
70 |
aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat |
168 |
Q |
| |
|
|||| ||||||||||||||||| || |||||||||| ||||||||| ||| | || ||||||| || |||||||||||| ||||||||||||||| |
|
|
| T |
14791 |
aaattaagagatgagagaagaaagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac |
14889 |
T |
 |
| Q |
169 |
tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt |
268 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| |
|
|
| T |
14890 |
tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtctg-ttacactctgtattatcaacctcagcaggctt |
14988 |
T |
 |
| Q |
269 |
ttacaattcttgat |
282 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
14989 |
ctacgattcttgat |
15002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 153 - 364
Target Start/End: Complemental strand, 12415189 - 12414990
Alignment:
| Q |
153 |
gtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattat |
252 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||||| |||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
12415189 |
gtgtgagattatccattatagtatcctcttatcagaaacttcttaatagcactataataagttgatcacaccagatcagtccg-ttacactctgtattat |
12415091 |
T |
 |
| Q |
253 |
caacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttaca |
352 |
Q |
| |
|
|||| | |||||| ||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||| ||||| |
|
|
| T |
12415090 |
taaccatagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagacttgagatctag--ttaca |
12415002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 23895620 - 23895863
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
23895620 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
23895719 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||| | ||||||||||||||| |||||| |||||| ||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
23895720 |
gactagcactacaatatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
23895817 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
23895818 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
23895863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 22066476 - 22066226
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
22066476 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta |
22066377 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | |||||||||| |||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
22066376 |
accaacactataaggtcttgatcacactagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
22066279 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
22066278 |
ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag |
22066226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 23884675 - 23884425
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||||| |||||||||| |||| |||||||| ||| |||||||||| |
|
|
| T |
23884675 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattgtccactatagtatgcagttggtagaaacttcta |
23884576 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
23884575 |
accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
23884478 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
23884477 |
ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag |
23884425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 97 - 261
Target Start/End: Original strand, 10259783 - 10259946
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||| ||| ||||| |||| | |||||||| ||||| ||||||| ||||| |||| |||| ||||||||| || || ||||||||||| |
|
|
| T |
10259783 |
acacaggagaattattctggttcaccaaatccagctacttccagtcctcacacttcgtgtgggattctccactatagtatcctgctaagagaaacttctg |
10259882 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaa |
261 |
Q |
| |
|
| ||| ||||||| || ||||||||||||||| |||||| |||||| ||||||||| |||||||| |
|
|
| T |
10259883 |
actagcactataaattcttgatcacaccagatcagtccg-ttacaccctgtattataaacctcaa |
10259946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 11421455 - 11421611
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
|||||||| | ||||||| |||| |||| |||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||| || ||| ||||| |
|
|
| T |
11421455 |
acacaagataattatcctagttcatcaaatccggctacttccagtccccacacctcgtgtgagattatccactatagtatcatgttaacaaaaaattctg |
11421554 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatca |
254 |
Q |
| |
|
| || ||||||| | ||||||||||||||| |||| | |||||| |||||||||| |
|
|
| T |
11421555 |
actaacactataagatcttgatcacaccagatcagtctg-ttacaccatgtattatca |
11421611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 12173598 - 12173473
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga |
202 |
Q |
| |
|
|||||||||| | ||||| ||| |||||||||| ||||||||||| |||||| |||||||||| |||||||||||| || ||||||||| ||| ||| |
|
|
| T |
12173598 |
gagatttatcatagttcaccaaactcggctactttcagtccccacaccttgtgtaagattatccactatagtatcatgctaacagaaacttatgactagc |
12173499 |
T |
 |
| Q |
203 |
actataatttgttgatcacaccagat |
228 |
Q |
| |
|
|| |||| || ||||||||||||||| |
|
|
| T |
12173498 |
accataaattcttgatcacaccagat |
12173473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 336
Target Start/End: Complemental strand, 18420724 - 18420492
Alignment:
| Q |
108 |
ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaacta |
206 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| |||||| |||| | |||||||||||| || ||||| | || || || ||||||||||||| ||| |||| |
|
|
| T |
18420724 |
ttatcctggttcacaaaacccggctacttccagtcccgacacctcgtgtgagattatacactatagttttcttgctaacagaaacttctgactagcacta |
18420625 |
T |
 |
| Q |
207 |
taatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt-----gatcacacaagaaaggttggaa |
301 |
Q |
| |
|
| | ||||||||||||||| |||||| |||||| ||||||||||||||||| |||||| |||||||||| || || |||||||||||||| |
|
|
| T |
18420624 |
acaaatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatacaattctttgcacaatagcaaaagaaaggttggaa |
18420527 |
T |
 |
| Q |
302 |
caattctatct-caaactattaagcccaatagactt |
336 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
18420526 |
-ttttctatctccaaactattaagcccaatagactt |
18420492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 279
Target Start/End: Original strand, 23110256 - 23110404
Alignment:
| Q |
130 |
gctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagata |
229 |
Q |
| |
|
|||||||| ||||||||||| |||| |||||||||| |||||||| | || ||||||||||||| ||| |||||| || |||||||||||||||| |
|
|
| T |
23110256 |
gctacttccagtccccacaccccgtgttagattatccactatagtattcggctaacagaaacttctgactagcactatatgttcttgatcacaccagata |
23110355 |
T |
 |
| Q |
230 |
agtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
||| | ||||||| | |||||||||| |||| |||||| || ||||||| |
|
|
| T |
23110356 |
agt-ctattacacccaatattatcaacatcaacaggcttctaaaattctt |
23110404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 345
Target Start/End: Original strand, 17512238 - 17512476
Alignment:
| Q |
108 |
ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactat |
207 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| ||||||||||||| |||||||||||||| |||||||| ||| |||||||||| | | ||||| |
|
|
| T |
17512238 |
ttatcctggttcaccaaactcggctactttcagtccccacacttcttgtgagattatccactatagtatacagttggtagaaacttctaaccaacactat |
17512337 |
T |
 |
| Q |
208 |
aatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgat---cacacaagaaaggttggaacaa |
304 |
Q |
| |
|
|| | |||||||||| |||| |||| | || || ||||||||||||||| | |||||| |||||||||| | | ||| |||||||||||||| |
|
|
| T |
17512338 |
aaagtcttgatcacactagatcagtctg--ta-accctgtattatcaaccttagcaggcttctacaattctttgtttacgcacgagaaaggttggaactt |
17512434 |
T |
 |
| Q |
305 |
tt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||| ||| |||| |
|
|
| T |
17512435 |
ttcctatctaaaactattaagcccaatagacttgagatctag |
17512476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 279
Target Start/End: Complemental strand, 14102480 - 14102309
Alignment:
| Q |
108 |
ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaacta |
206 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| ||||||||||| | |||||||||||||| ||||| | || || || ||||||||| ||| ||| ||| |
|
|
| T |
14102480 |
ttatcctggttcaccaaacccggctacttccagtccccacacctcttgtgagattatccactatagttgtcttgctaacagaaacttttgactagcactg |
14102381 |
T |
 |
| Q |
207 |
taatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
||| | ||||||||| ||||| || || |||||| ||||||||| ||||||| || ||| |||||||||| |
|
|
| T |
14102380 |
taaggtcttgatcacaacagatcag-cctgttacaccctgtattattaacctcagcagacttctacaattctt |
14102309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 94435 - 94678
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||||||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
94435 |
acacaggagagttatcctggttcactaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
94534 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
94535 |
gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
94632 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
94633 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
94678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 103876 - 104119
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||| ||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
103876 |
acacaggagagttatcctggttcaccaaacccggctaattccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
103975 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||||| ||||||||||||||| |||||| || ||||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
103976 |
gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
104073 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
104074 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
104119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0206 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0206
Description:
Target: scaffold0206; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 2292 - 2042
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
|||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| | |||||||| |
|
|
| T |
2292 |
acacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaacttcta |
2193 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa |
293 |
Q |
| |
|
| | ||||||| | ||||||||||||||| |||||| || | ||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
2192 |
accaacactataaggtcttgatcacaccagatcagtccg--taatccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa |
2095 |
T |
 |
| Q |
294 |
ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag |
345 |
Q |
| |
|
||||||||| || |||||||||||||||||||| ||||||||| ||| |||| |
|
|
| T |
2094 |
ggttggaactcttcctatctcaaactattaagccaaatagacttgagatctag |
2042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0482 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0482
Description:
Target: scaffold0482; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 336
Target Start/End: Complemental strand, 3731 - 3474
Alignment:
| Q |
83 |
agagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgt |
181 |
Q |
| |
|
||||||||| || ||||| |||| |||| ||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || |
|
|
| T |
3731 |
agagaagaagaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgc |
3632 |
T |
 |
| Q |
182 |
tatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttg |
280 |
Q |
| |
|
|| ||||||||||||| ||| |||| ||||| ||||||||||||||| |||| | || ||||||||||||||||||| |||||| |||||||| ||| |
|
|
| T |
3631 |
taacagaaacttctgactagcactacaatttcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttatacaattctttg |
3534 |
T |
 |
| Q |
281 |
atca----cacaagaaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
|| || |||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
3533 |
cacactagcaaaagaaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
3474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0223 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0223
Description:
Target: scaffold0223; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 321
Target Start/End: Original strand, 27066 - 27289
Alignment:
| Q |
106 |
atttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat----tatagtatcatgttatcagaaacttctgaatag |
201 |
Q |
| |
|
||||| ||||| |||| ||| ||||||||||| |||||||| |||| |||||||||||||||| ||||||||| |||||||||||||| |||| |
|
|
| T |
27066 |
atttaacctgactcaccaaagtcggctacttccagtccccatacttcgtgtgagattatccatccactatagtatccaactatcagaaacttcttaataa |
27165 |
T |
 |
| Q |
202 |
aactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaaaggtt |
297 |
Q |
| |
|
|||||| || |||||||||| |||| | | || |||||||||||||||||||||||| |||||| ||||||||||| || ||||||||||||| |
|
|
| T |
27166 |
cactatatgttcttgatcacactagatcaattcg-ttacactctgtattatcaacctcagcaggcttattacaattctttgctttcgcacaagaaaggtt |
27264 |
T |
 |
| Q |
298 |
ggaacaa-ttctatctcaaactatt |
321 |
Q |
| |
|
||||||| |||| |||||||||||| |
|
|
| T |
27265 |
ggaacaatttctctctcaaactatt |
27289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 30827 - 31070
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
30827 |
acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
30926 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| || |||| ||| | ||||||||||||||| |||| | | |||| ||||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
30927 |
gactaacactacaatattttgatcacaccagatcagtcag-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag |
31024 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
31025 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
31070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 10225 - 10045
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagta-tcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| ||||| || ||||| ||| |||||| ||| ||||||||||| ||||||||||||||| |||||| || || || ||||||||||| |
|
|
| T |
10225 |
acacatgagagttatcttggttcaccaaacacggcta-ttccagtccccacaccccgtgtgagattatccactatagttgtcttgctaacagaaacttct |
10127 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt |
279 |
Q |
| |
|
|| ||| ||||||| | | ||||||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10126 |
gactagcactataaggtctagatcacaccagatcagtctg-ttacac-ctgtattatcaacctcaataggcttctacaattctt |
10045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 408512 - 408269
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct |
195 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| || ||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||||| |
|
|
| T |
408512 |
acacaggagagttatcctggttcaccaaacccgtctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct |
408413 |
T |
 |
| Q |
196 |
gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag |
290 |
Q |
| |
|
|| ||| |||| ||| | ||||||||||||||| |||||| | |||| |||||||||||||||| |||||| |||||||| ||| || || ||| |
|
|
| T |
408412 |
gactagcactacaatatcttgatcacaccagattagtccg-taacac-ctgtattatcaacctcttcaggcttatacaattctttgcacactagcaaaag |
408315 |
T |
 |
| Q |
291 |
aaaggttggaacaattctatctc-aaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
408314 |
aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt |
408269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 257141 - 256901
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg |
196 |
Q |
| |
|
||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||||| |||||| |||||||| |||||||| ||| |||||||||| |
|
|
| T |
257141 |
acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgaaattatccactatagtattcagttggtagaaacttcta |
257042 |
T |
 |
| Q |
197 |
aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa |
292 |
Q |
| |
|
| | ||||||| | ||||||||||||||| ||| || || ||||||||||||||||||| | |||| ||||||||||| | || ||||| |
|
|
| T |
257041 |
accaacactataaagtcttgatcacaccagatcagttcg--taacctctgtattatcaacctcagcaagcttcttacaattctttgcactagcaaaagaa |
256944 |
T |
 |
| Q |
293 |
aggttggaacaattctatctcaaactattaagcccaatagactt |
336 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
256943 |
aggttggaa-ttttctatctcaaactattcagcccaatagactt |
256901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 2265 - 2344
Alignment:
| Q |
97 |
acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat |
176 |
Q |
| |
|
||||| |||| |||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
2265 |
acacaggagagttatcctggttcacccaatccggctacttctagtccccacacttcttgtgagattatccactatagtat |
2344 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 2410 - 2458
Alignment:
| Q |
307 |
ctatctcaaactattaagcccaatagacttaagacctagctttacacttt |
356 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||| |||||||||| |
|
|
| T |
2410 |
ctatctcaaactattaagcccaatagacttgagatctag-tttacacttt |
2458 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0334 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0334
Description:
Target: scaffold0334; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 12558 - 12629
Alignment:
| Q |
103 |
gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt |
174 |
Q |
| |
|
|||| |||||||| ||||| ||| |||||||||| |||||| |||||| ||||||||||||||| |||||| |
|
|
| T |
12558 |
gagagttatcctggttcacccaatccggctacttccagtccctacacttcgtgtgagattatccactatagt |
12629 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0101
Description:
Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 42161 - 42197
Alignment:
| Q |
285 |
cacaagaaaggttggaacaattctatctcaaactatt |
321 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
42161 |
cacaagaaaggtttgaacaattctttctcaaactatt |
42197 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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