View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18079_low_7 (Length: 393)

Name: NF18079_low_7
Description: NF18079
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18079_low_7
NF18079_low_7
[»] chr7 (19 HSPs)
chr7 (50-365)||(4306516-4306827)
chr7 (97-345)||(9736879-9737129)
chr7 (97-345)||(14644482-14644732)
chr7 (97-336)||(7592947-7593190)
chr7 (97-345)||(14634782-14635032)
chr7 (97-345)||(33292181-33292431)
chr7 (97-345)||(15947377-15947627)
chr7 (97-336)||(15174481-15174724)
chr7 (103-279)||(19352599-19352774)
chr7 (97-359)||(32817917-32818179)
chr7 (103-365)||(11634340-11634603)
chr7 (245-361)||(48711432-48711550)
chr7 (97-174)||(13874492-13874568)
chr7 (285-345)||(28344139-28344200)
chr7 (305-336)||(14777367-14777398)
chr7 (305-336)||(15229505-15229536)
chr7 (97-174)||(14777518-14777596)
chr7 (97-174)||(15229656-15229734)
chr7 (117-176)||(48710031-48710091)
[»] chr1 (12 HSPs)
chr1 (97-341)||(26906250-26906493)
chr1 (128-361)||(21633500-21633732)
chr1 (97-345)||(14272022-14272272)
chr1 (97-345)||(14281888-14282138)
chr1 (40-325)||(28309963-28310236)
chr1 (97-320)||(5378428-5378654)
chr1 (139-301)||(30676766-30676930)
chr1 (97-174)||(21919435-21919512)
chr1 (139-325)||(15810030-15810217)
chr1 (108-279)||(40999050-40999221)
chr1 (214-345)||(3471058-3471191)
chr1 (307-354)||(21919580-21919626)
[»] chr4 (15 HSPs)
chr4 (70-364)||(23622845-23623127)
chr4 (97-336)||(3242291-3242534)
chr4 (97-336)||(54689917-54690160)
chr4 (97-336)||(54699348-54699591)
chr4 (97-345)||(20884453-20884703)
chr4 (97-336)||(26812449-26812692)
chr4 (97-336)||(26821916-26822159)
chr4 (97-279)||(3918069-3918250)
chr4 (97-279)||(37059089-37059270)
chr4 (97-359)||(50516502-50516764)
chr4 (203-363)||(16489950-16490101)
chr4 (97-279)||(15842902-15843083)
chr4 (128-345)||(11482248-11482467)
chr4 (97-195)||(18125416-18125514)
chr4 (129-228)||(45609499-45609598)
[»] chr5 (30 HSPs)
chr5 (97-361)||(42732581-42732842)
chr5 (128-336)||(31150670-31150868)
chr5 (128-336)||(5600532-5600730)
chr5 (128-336)||(5610178-5610376)
chr5 (97-336)||(24422218-24422461)
chr5 (97-336)||(30444833-30445076)
chr5 (97-345)||(11223309-11223558)
chr5 (97-336)||(24412769-24413012)
chr5 (131-361)||(26652541-26652768)
chr5 (131-361)||(26924126-26924353)
chr5 (97-336)||(30454205-30454448)
chr5 (97-279)||(18569042-18569223)
chr5 (97-345)||(33955504-33955754)
chr5 (97-336)||(30459263-30459506)
chr5 (97-336)||(22489126-22489369)
chr5 (103-345)||(20035932-20036176)
chr5 (96-345)||(20834364-20834615)
chr5 (97-176)||(22448334-22448413)
chr5 (131-256)||(22118140-22118265)
chr5 (97-336)||(13815377-13815617)
chr5 (103-365)||(24244053-24244316)
chr5 (103-365)||(24290677-24290940)
chr5 (97-177)||(37514863-37514943)
chr5 (97-279)||(4635948-4636129)
chr5 (129-174)||(1693703-1693748)
chr5 (128-276)||(16110887-16111037)
chr5 (307-354)||(22457797-22457843)
chr5 (129-174)||(17553829-17553874)
chr5 (236-336)||(17553934-17554025)
chr5 (307-354)||(22448479-22448525)
[»] chr8 (26 HSPs)
chr8 (97-361)||(31575415-31575676)
chr8 (86-279)||(15833953-15834145)
chr8 (97-345)||(42712182-42712432)
chr8 (97-345)||(12925287-12925537)
chr8 (97-345)||(20030112-20030362)
chr8 (83-336)||(7789068-7789325)
chr8 (97-345)||(20044751-20045001)
chr8 (97-279)||(20714072-20714253)
chr8 (97-365)||(18883164-18883433)
chr8 (97-365)||(18143433-18143702)
chr8 (97-336)||(25051067-25051307)
chr8 (103-365)||(18251743-18252006)
chr8 (97-336)||(25037030-25037270)
chr8 (103-176)||(4843732-4843805)
chr8 (139-345)||(12767564-12767772)
chr8 (103-176)||(18233031-18233104)
chr8 (103-176)||(18242482-18242555)
chr8 (97-176)||(12915563-12915642)
chr8 (97-174)||(33592138-33592215)
chr8 (97-174)||(33601777-33601854)
chr8 (97-234)||(24096079-24096217)
chr8 (131-234)||(24634014-24634117)
chr8 (288-365)||(18232841-18232917)
chr8 (288-365)||(18242292-18242368)
chr8 (128-173)||(42896184-42896229)
chr8 (288-336)||(4843921-4843968)
[»] chr3 (20 HSPs)
chr3 (70-364)||(54624581-54624863)
chr3 (70-336)||(17529838-17530094)
chr3 (68-293)||(32877856-32878080)
chr3 (128-336)||(48978622-48978816)
chr3 (128-336)||(48988162-48988356)
chr3 (41-336)||(19388712-19389002)
chr3 (97-336)||(24794550-24794793)
chr3 (97-336)||(28367657-28367900)
chr3 (97-336)||(28375475-28375718)
chr3 (97-336)||(28383297-28383540)
chr3 (97-336)||(28351724-28351967)
chr3 (97-345)||(5385623-5385873)
chr3 (128-279)||(38529212-38529362)
chr3 (87-345)||(13328272-13328532)
chr3 (128-345)||(46305609-46305827)
chr3 (97-334)||(4951537-4951777)
chr3 (139-345)||(23486974-23487182)
chr3 (97-195)||(4361520-4361618)
chr3 (185-320)||(7784100-7784237)
chr3 (305-336)||(17535002-17535033)
[»] scaffold0021 (4 HSPs)
scaffold0021 (70-364)||(99909-100191)
scaffold0021 (214-345)||(143102-143235)
scaffold0021 (97-279)||(124050-124230)
scaffold0021 (305-364)||(180832-180889)
[»] chr2 (11 HSPs)
chr2 (128-336)||(1800445-1800643)
chr2 (70-336)||(22632354-22632610)
chr2 (128-336)||(1790951-1791145)
chr2 (103-345)||(35877449-35877693)
chr2 (103-345)||(35884938-35885182)
chr2 (103-345)||(36724651-36724895)
chr2 (97-279)||(31710470-31710651)
chr2 (103-279)||(24022752-24022927)
chr2 (97-345)||(3396856-3397106)
chr2 (97-336)||(14273146-14273388)
chr2 (108-176)||(16446668-16446736)
[»] scaffold0247 (1 HSPs)
scaffold0247 (130-363)||(24520-24741)
[»] scaffold0269 (1 HSPs)
scaffold0269 (70-282)||(14791-15002)
[»] chr6 (11 HSPs)
chr6 (153-364)||(12414990-12415189)
chr6 (97-336)||(23895620-23895863)
chr6 (97-345)||(22066226-22066476)
chr6 (97-345)||(23884425-23884675)
chr6 (97-261)||(10259783-10259946)
chr6 (97-254)||(11421455-11421611)
chr6 (103-228)||(12173473-12173598)
chr6 (108-336)||(18420492-18420724)
chr6 (130-279)||(23110256-23110404)
chr6 (108-345)||(17512238-17512476)
chr6 (108-279)||(14102309-14102480)
[»] scaffold0028 (2 HSPs)
scaffold0028 (97-336)||(94435-94678)
scaffold0028 (97-336)||(103876-104119)
[»] scaffold0206 (1 HSPs)
scaffold0206 (97-345)||(2042-2292)
[»] scaffold0482 (1 HSPs)
scaffold0482 (83-336)||(3474-3731)
[»] scaffold0223 (1 HSPs)
scaffold0223 (106-321)||(27066-27289)
[»] scaffold0040 (2 HSPs)
scaffold0040 (97-336)||(30827-31070)
scaffold0040 (97-279)||(10045-10225)
[»] scaffold0001 (1 HSPs)
scaffold0001 (97-336)||(408269-408512)
[»] scaffold0010 (1 HSPs)
scaffold0010 (97-336)||(256901-257141)
[»] scaffold0053 (2 HSPs)
scaffold0053 (97-176)||(2265-2344)
scaffold0053 (307-356)||(2410-2458)
[»] scaffold0334 (1 HSPs)
scaffold0334 (103-174)||(12558-12629)
[»] scaffold0101 (1 HSPs)
scaffold0101 (285-321)||(42161-42197)


Alignment Details
Target: chr7 (Bit Score: 153; Significance: 5e-81; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 50 - 365
Target Start/End: Original strand, 4306516 - 4306827
Alignment:
50 tgtgaaatgtgttaaatgaaaaataaagagatgagagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacac 149  Q
    |||||||| |||||||  |||||||||||||||||||||||| |||||||||| |||||||||||  ||||| |||  | |||||||| ||| |||||||    
4306516 tgtgaaatatgttaaac-aaaaataaagagatgagagaagaaagatcacacaaaagatttatcctagttcaccaaagccagctacttccagttcccacac 4306614  T
150 tttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtat 249  Q
    || | |||||||| || | |||||||||    |||||||||||| ||||||| |||||   |||||||||||||||||| ||||||||||||||||||||    
4306615 ttcgagtgagattttctactatagtatccaactatcagaaacttatgaatagcactatg--ttgttgatcacaccagatcagtccgattacactctgtat 4306712  T
250 tatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagcttt 349  Q
    |||||||||||  || ||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | |||||| |||    
4306713 tatcaacctcagcagacttctacaattattgatcacacaagaaaggttggaacaactctatatcaaactattaagcccaatagacttgaaacctag-ttt 4306811  T
350 acactttgtatggtga 365  Q
    ||||||||||||||||    
4306812 acactttgtatggtga 4306827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 9737129 - 9736879
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| |||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||||   |||   ||||||||||     
9737129 acacaggagagttatcctggttcactaaacccggctacttccagtccccacacttcgtgtgagattatccattatagtattcagtttgtagaaacttcta 9737030  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||    ||||||||||||||| |||| |  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
9737029 accaacactataaggccttgatcacaccagatcagtctg--tagcccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 9736932  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
9736931 ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag 9736879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 14644482 - 14644732
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
14644482 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 14644581  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
14644582 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 14644679  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
14644680 ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag 14644732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 7593190 - 7592947
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    |||||||||| |||||||| ||||| |||   ||||||||| ||||||||||| | ||||||||||||||||||||| | || || || |||||||||||    
7593190 acacaagagagttatcctggttcaccaaacctggctacttccagtccccacacctcgtgtgagattatccattatagttttcttgctaacagaaacttct 7593091  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||| | ||||||||||||||| |||||| | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
7593090 gactagcactacaatatcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcatcaggcttatacaattctttgcacactagcaaaag 7592993  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
7592992 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 7592947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 14634782 - 14635032
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   | |   ||||||||||     
14634782 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagctggtagaaacttcta 14634881  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
14634882 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 14634979  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
14634980 ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag 14635032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 33292181 - 33292431
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
33292181 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 33292280  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
33292281 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 33292378  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || ||||||||||||||| |||||||||||||| ||| ||||    
33292379 ggttggaactcttcctatctcaaactattgagcccaatagacttgagatctag 33292431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 15947377 - 15947627
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| |||| |||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
15947377 acacaggagagttatcctggttcaccaaacccggctacttccagtcaccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 15947476  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
15947477 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 15947574  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||| ||| ||| ||||    
15947575 ggttggaactcttcctatctcaaactattaagcccaatagccttgagatctag 15947627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 15174724 - 15174481
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| ||||||||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || || ||||||||    
15174724 acacaggagatttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacaaaaacttct 15174625  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||  | ||||||||||||||| |||||| |||||| |||||||||||||||||  |||||| || ||||| |||  ||    || |||    
15174624 gactagcactacaagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatataattctttgcacactagcaaaag 15174527  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
15174526 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 15174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 279
Target Start/End: Original strand, 19352599 - 19352774
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||| |||| ||| ||||| ||||||||||||||| ||||| ||||||| ||||||||||||||| |||||| || || || ||||||||||||| | |     
19352599 gagagttatactggttcaccaaattcggctacttccagtcctcacacttcgtgtgagattatccactatagtctcctgctaacagaaacttctgacttgt 19352698  T
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    ||||||| ||  ||||||||||||||   |||| |||||| ||||||||| |||||||  |||||| |||| |||||    
19352699 actataaattcctgatcacaccagatctttccg-ttacaccctgtattatgaacctcatcaggcttctacacttctt 19352774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 359
Target Start/End: Complemental strand, 32818179 - 32817917
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  ||||||||||  |||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
32818179 acacaggagagttatcctggttcaccaaacccggctacttccggtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttcta 32818080  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattct---tgatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| |||| |  ||  | ||||||||||||||||   |||||| ||||||| |   |  || |||||||||    
32818079 accaacactataaggtcttgatcacaccagatcagtctg--taacccctgtattatcaacctccgcaggcttctacaattttttgttttcgcacaagaaa 32817982  T
294 ggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgta 359  Q
    |||| ||||  | |||||| ||||||||||||||||||||||| ||| |||| |||||||||||||    
32817981 ggttcgaactttcctatcttaaactattaagcccaatagacttgagatctag-tttacactttgta 32817917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 365
Target Start/End: Original strand, 11634340 - 11634603
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||  ||||||||||| |  |      
11634340 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaaccaac 11634439  T
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaaaggttg 298  Q
    |||||||  | ||||||||||| ||| |||  |  ||  |||||||||||||||||||  |||||| |||||||||||     |  || |||||||||||    
11634440 actataacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaaaggttg 11634537  T
299 gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 365  Q
    |||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
11634538 gaa-ttttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 11634603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 48711432 - 48711550
Alignment:
245 tgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagac 341  Q
    ||||||||||||||||| |||||| || |||||||     ||||||||||||||||  |||  ||||||||||||||||||||| |||||||||| ||||    
48711432 tgtattatcaacctcaacaggcttctataattctttgctttcacacaagaaaggttaaaacttttctatctcaaactattaagcacaatagacttgagac 48711531  T
342 ctagctttacactttgtatg 361  Q
    ||||  ||||||||||||||    
48711532 ctag-attacactttgtatg 48711550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 13874568 - 13874492
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 174  Q
    ||||| |||| |||||||| |||||  ||| || ||||||| ||||||||||||| ||||||||||||||| ||||||    
13874568 acacaggagagttatcctggttcacccaatccg-ctacttccagtccccacacttcgtgtgagattatccactatagt 13874492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 28344200 - 28344139
Alignment:
285 cacaagaaaggttggaacaattc-tatctcaaactattaagcccaatagacttaagacctag 345  Q
    ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||| ||| ||||    
28344200 cacaagaaaggctggaactcttcctatctcaaactattaagcccaatagacttgagatctag 28344139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 336
Target Start/End: Complemental strand, 14777398 - 14777367
Alignment:
305 ttctatctcaaactattaagcccaatagactt 336  Q
    ||||||||||||||||||||||||||||||||    
14777398 ttctatctcaaactattaagcccaatagactt 14777367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 336
Target Start/End: Complemental strand, 15229536 - 15229505
Alignment:
305 ttctatctcaaactattaagcccaatagactt 336  Q
    ||||||||||||||||||||||||||||||||    
15229536 ttctatctcaaactattaagcccaatagactt 15229505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 14777596 - 14777518
Alignment:
97 acacaagagatttatcctgattcactaaat-tcggctacttctagtccccacactttgtgtgagattatccattatagt 174  Q
    |||||||| |||||||||  |||||  ||| | |||||| |||||| |||||||||||||||||||| |||| ||||||    
14777596 acacaagatatttatcctagttcacccaatgtgggctacgtctagttcccacactttgtgtgagattttccactatagt 14777518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 15229734 - 15229656
Alignment:
97 acacaagagatttatcctgattcactaaat-tcggctacttctagtccccacactttgtgtgagattatccattatagt 174  Q
    |||||||| |||||||||  |||||  ||| | |||||| |||||| |||||||||||||||||||| |||| ||||||    
15229734 acacaagatatttatcctagttcacccaatgtgggctacgtctagttcccacactttgtgtgagattttccactatagt 15229656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 48710031 - 48710091
Alignment:
117 ttcactaaattcggctacttctagtcccc-acactttgtgtgagattatccattatagtat 176  Q
    ||||| ||| |||| |||||| ||||||| |||||| ||||||||||||||| ||||||||    
48710031 ttcaccaaactcggatacttccagtcccccacacttcgtgtgagattatccactatagtat 48710091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 97 - 341
Target Start/End: Original strand, 26906250 - 26906493
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| ||||||||||||| ||||| |||   |||||||||||||||||| || | |||||||||||||||||||| |||| ||||| ||||||||||||    
26906250 acacacgagatttatcctggttcaccaaaccaggctacttctagtccccatacctcgtgtgagattatccattataatatcttgttaacagaaacttctg 26906349  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggt 296  Q
    | ||| ||||||| || ||| ||||||||||| |||| | ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
26906350 actagcactataagttcttggtcacaccagatcagtctg-ttacactctgtattatcaacctcagcagacttttacaattcttgatcacacaagaaaggt 26906448  T
297 tggaacaattctatctcaaactattaagcccaatagacttaagac 341  Q
    |||||||||||| ||||||||||||| | | ||||||||| ||||    
26906449 tggaacaattctttctcaaactattatgacaaatagacttgagac 26906493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 128 - 361
Target Start/End: Complemental strand, 21633732 - 21633500
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||  |  ||  |||||||||||| ||| | |||||  | ||| ||||||||||    
21633732 cggctacgtctagtccccacactttttgtgagattatccactatagtattctactagtagaaacttctgactagcattataaggtcttggtcacaccaga 21633633  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttg--atcacacaagaaaggttggaacaattctatctcaaactattaagc 325  Q
    | ||||||   |||  |||||||||||||||||  |||||| || | | ||||   |||||||||||| ||||||||  |||||||||||||||||| ||    
21633632 tcagtccgga-acaa-ctgtattatcaacctcagcaggcttctaaattccttgctttcacacaagaaatgttggaacttttctatctcaaactattatgc 21633535  T
326 ccaatagacttaagacctagctttacactttgtatg 361  Q
    ||||||||||| ||||||||  ||||||||||||||    
21633534 ccaatagacttgagacctag-attacactttgtatg 21633500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 14272022 - 14272272
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
14272022 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 14272121  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||| ||||    
14272122 acaaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaggaaa 14272219  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
     ||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
14272220 tgttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 14272272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 14281888 - 14282138
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
14281888 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 14281987  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||| ||||    
14281988 acaaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaggaaa 14282085  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
     ||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
14282086 tgttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 14282138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 325
Target Start/End: Original strand, 28309963 - 28310236
Alignment:
40 agtgatagtgtgtgaaatgtgttaaatgaaaaataaagagatgagagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttcta 139  Q
    |||||||||||||||| |||||||||  |||||||| |||||| |||||||   |  |||||||||||||||||||||||||  ||  ||||||||||      
28309963 agtgatagtgtgtgaagtgtgttaaacaaaaaataa-gagatgggagaagagaaagaacacaagagatttatcctgattcacctaac-cggctacttccg 28310060  T
140 gtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatta 239  Q
    ||  |||||||  |||||   ||||||| ||||||||| || ||||| ||||||| |||||  ||||||| |||||||||||||||||| |||||| |||    
28310061 gtttccacactacgtgtgg--ttatccactatagtatcctgctatcaaaaacttccgaataacactataagttgttgatcacaccagatcagtccg-tta 28310157  T
240 cactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttgga-acaattctatctcaaactattaagc 325  Q
    || |||||||||| | ||| || ||||        ||||||||||| ||| |||||||| | ||||  |||||||||||||||||||    
28310158 cagtctgtattattacccttaacaggc--------ttcttgatcactcaaaaaaggttgaacacaaccctatctcaaactattaagc 28310236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 320
Target Start/End: Original strand, 5378428 - 5378654
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
5378428 acacaggagaattatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct 5378527  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaa 292  Q
     | ||| |||||||  | ||||||||||||||| |||| | |||||| || |||||| |||||||  || ||| ||||||||||     || ||||||||    
5378528 aactagcactataaggtcttgatcacaccagatcagtctg-ttacaccctatattataaacctcagcagacttctacaattctttgctttcgcacaagaa 5378626  T
293 aggttggaacaattctatctcaaactat 320  Q
    ||||||  |||||||| |||||||||||    
5378627 aggttgttacaattctttctcaaactat 5378654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 301
Target Start/End: Complemental strand, 30676930 - 30676766
Alignment:
139 agtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt 238  Q
    ||||||||||||| |||||||||||||||||| | |||   | ||| |||||||| ||||||| ||||||  || |||||||||| |||| |||| | ||    
30676930 agtccccacacttcgtgtgagattatccattacaatattcagctataagaaacttatgaatagcactatatgttcttgatcacacaagatcagtctg-tt 30676832  T
239 acactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttggaa 301  Q
    ||||||||||||||||| ||||| |  ||| || |||||||     ||||||||||||||||||||    
30676831 acactctgtattatcaatctcaacatacttatataattctttgctttcacacaagaaaggttggaa 30676766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 21919435 - 21919512
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 174  Q
    ||||| |||| ||||||||||||||  ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||    
21919435 acacaggagagttatcctgattcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 21919512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 15810030 - 15810217
Alignment:
139 agtccccacactttgtgtgagattatccattatagt-atcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgat 237  Q
    ||||||||||| | ||||||||||||||| |||| | ||| || || ||||||||||||| ||| |||||||  | ||||||||||||||| |||||| |    
15810030 agtccccacacctcgtgtgagattatccactataattatcttggtaacagaaacttctgagtagcactataaggtcttgatcacaccagatcagtccg-t 15810128  T
238 tacactctgtattatcaacctcaataggcttttacaattc-ttgatc--acacaagaaaggttggaacaattctatctcaaactattaagc 325  Q
    ||||| ||||||||||||| ||   | |||| |||||||| |||| |   || ||||||||||||||   |||||||||||||||||||||    
15810129 tacac-ctgtattatcaacttcggcatgcttctacaattctttgaaccagcaaaagaaaggttggaa-ttttctatctcaaactattaagc 15810217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 279
Target Start/End: Original strand, 40999050 - 40999221
Alignment:
108 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaacta 206  Q
    |||||||| ||||| |||  || | ||||| ||||||||||| | ||||||||||||||| ||||| | || || || | ||||||| ||| ||| ||||    
40999050 ttatcctggttcaccaaacccgacaacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacggaaacttatgactagcacta 40999149  T
207 taatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    |||  | ||||||||||||||| |||  | ||||||  ||||||||||||||||| || ||| ||||||||||    
40999150 taaggttttgatcacaccagatcagtttg-ttacaccatgtattatcaacctcaacagacttctacaattctt 40999221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 345
Target Start/End: Original strand, 3471058 - 3471191
Alignment:
214 ttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-ta 309  Q
    ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || ||||||||||||| ||||  ||| ||    
3471058 ttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttagaactcttccta 3471155  T
310 tctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||||||| |||||||||||| ||| ||||    
3471156 tctcaaactattaaacccaatagacttgagatctag 3471191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 21919580 - 21919626
Alignment:
307 ctatctcaaactattaagcccaatagacttaagacctagctttacact 354  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||    
21919580 ctatctcaaactattaagcccaatagacttgagaactag-tttacact 21919626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 70 - 364
Target Start/End: Complemental strand, 23623127 - 23622845
Alignment:
70 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 168  Q
    |||| ||||||||||||||||| ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
23623127 aaattaagagatgagagaagaaagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 23623029  T
169 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 268  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||  ||||||    
23623028 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtctg-ttacactctgtattatcaacctcagcaggctt 23622930  T
269 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg 364  Q
     ||| ||||||||||||||||||||         | |||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
23622929 ctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg 23622845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 3242291 - 3242534
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
3242291 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 3242390  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
3242391 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 3242488  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
3242489 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 3242534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 54689917 - 54690160
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
54689917 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 54690016  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
54690017 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 54690114  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
54690115 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 54690160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 54699348 - 54699591
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
54699348 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 54699447  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
54699448 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 54699545  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
54699546 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 54699591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 20884453 - 20884703
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||| | |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
20884453 acacaggagagttatcctggttccccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 20884552  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
20884553 accaacactataaggttttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 20884650  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
20884651 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 20884703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 26812692 - 26812449
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
26812692 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 26812593  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||| | ||||||||||||||| |||||| | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
26812592 gactagcactacaatatcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 26812495  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
26812494 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 26812449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 26822159 - 26821916
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
26822159 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 26822060  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||| | ||||||||||||||| |||||| | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
26822059 gactagcactacaatatcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 26821962  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
26821961 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 26821916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 3918250 - 3918069
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
3918250 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 3918151  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    || ||| | || ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| ||||||||||    
3918150 gactagcattacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctt 3918069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 37059270 - 37059089
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
37059270 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 37059171  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    || ||| |||| ||  | ||||||||||||||| |||||| |||||| |||||||||||||||||  |||||| ||||||||||    
37059170 gactagcactacaagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatacaattctt 37059089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 359
Target Start/End: Original strand, 50516502 - 50516764
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||| | |||  || ||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||| ||||     
50516502 acacaggagagttatcctggttccccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtattccgttggtagaaatttcta 50516601  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| |||||| | || || ||||||||||||||||  ||||| |||||||||||     || | |||||||    
50516602 accaacactataaggtcttgatcacaccagatcagtccg-taaccct-tgtattatcaacctcagcaggctgttacaattctttgctttcgctcaagaaa 50516699  T
294 ggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgta 359  Q
    |||||||||  | |||||||||||||||||||||||||||||| ||| |||  |||||||||||||    
50516700 ggttggaactttcctatctcaaactattaagcccaatagacttgagatcta-ttttacactttgta 50516764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 16489950 - 16490101
Alignment:
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaac 302  Q
    ||||||||||||||||||||||| || |||| | |||||||| |||||||||||||||  || ||| ||| |||||||||||||||| |||      ||     
16489950 actataatttgttgatcacaccatatcagtctg-ttacactcagtattatcaacctcagcagacttctacgattcttgatcacacaaaaaa------aaa 16490042  T
303 aattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggt 363  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||  |||| |||||||||||    
16490043 aattctatctcaaactattaagcccaataaacttgagatctag--ttacgctttgtatggt 16490101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 279
Target Start/End: Original strand, 15842902 - 15843083
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| ||||| || ||||| ||| ||||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
15842902 acacaggagagttatcttggttcaccaaactcggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct 15843001  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    || ||| |||||||  | ||||||||| ||||| |||| | |||||| ||||||||||||||| |  |||||| ||||||||||    
15843002 gactagcactataagatcttgatcacatcagatcagtctg-ttacac-ctgtattatcaacctaagcaggcttctacaattctt 15843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 345
Target Start/End: Complemental strand, 11482467 - 11482248
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||   |||   |||||||||| |  |  |||||||  | || ||||||||| |    
11482467 cggctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaacttctaaccaacactataaggtctttatcacaccata 11482368  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttggaacaatt-ctatctcaaactattaa 323  Q
    | ||||||  ||  | |||||||||||||||||   ||||| ||||||||||     || ||||||||||||||||||  || |||||||||||||||||    
11482367 tcagtccg--taacccctgtattatcaacctcagccggcttctacaattctttgctttcgcacaagaaaggttggaactcttcctatctcaaactattaa 11482270  T
324 gcccaatagacttaagacctag 345  Q
    ||| ||||||||| ||| ||||    
11482269 gccgaatagacttgagatctag 11482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 18125416 - 18125514
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttct 195  Q
    ||||||||||||||||||| |||| ||||| ||| || ||   ||| |||||| | ||||||||||||||||||||||||| || || || ||||||||    
18125416 acacaagagatttatcctggttcattaaatccggttattttcggtctccacacctcgtgtgagattatccattatagtatcctgctaacaaaaacttct 18125514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 45609598 - 45609499
Alignment:
129 ggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagat 228  Q
    ||||||||| ||||| | ||||| || |||||||||||| ||| |||||    |||||||||||| ||||||| ||||||  |  |||||||||||||||    
45609598 ggctacttccagtcctcgcacttcgtatgagattatccactatggtatccaactatcagaaacttttgaatagcactatatgtccttgatcacaccagat 45609499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 97 - 361
Target Start/End: Original strand, 42732581 - 42732842
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    |||||||||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   | ||  ||||||||||     
42732581 acacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaacttcta 42732680  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggt 296  Q
    | ||| |||||||  | ||||||||||||||| ||||| |  || | |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
42732681 actagcactataaggtcttgatcacaccagatcagtcc-agaaccc-ctgtattatcaacctcaacaggcttctacaattcttgatcacacaagaaaggt 42732778  T
297 tggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatg 361  Q
    || |||  |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
42732779 tgaaactcttctatctcaaactattaagcccaatagacttgagatctag-tttacactttgtatg 42732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 336
Target Start/End: Original strand, 31150670 - 31150868
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    ||||||| || ||||||||||||  ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||    
31150670 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga 31150769  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 327  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
31150770 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 31150859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 5600730 - 5600532
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    ||||||| || |||||||||||   ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||    
5600730 cggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga 5600631  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 327  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
5600630 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 5600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 5610376 - 5610178
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    ||||||| || |||||||||||   ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||    
5610376 cggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga 5610277  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 327  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
5610276 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 5610187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 24422461 - 24422218
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
24422461 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 24422362  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
24422361 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 24422264  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
24422263 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 24422218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 30444833 - 30445076
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||||||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
30444833 acacaggagagttatcctgattcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 30444932  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| ||||| || |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
30444933 gactagcactacaatttcttgatcacaccagatcagtcc-ataacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 30445030  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
30445031 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 30445076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 11223558 - 11223309
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    |||||| ||| |||||||| ||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||   ||  | ||||||||||     
11223558 acacaaaagagttatcctggttcaccaaactcggctacttccagtccccacacttcgtgtgagattatccattatagtatacagtggt-agaaacttcta 11223460  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| |||| |  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
11223459 accaacactataaggtcttgatcacaccagatcagtctg--taacccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 11223362  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
11223361 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 11223309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 24413012 - 24412769
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
24413012 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 24412913  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
24412912 gactagcactacaatttcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 24412815  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
24412814 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 24412769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 361
Target Start/End: Complemental strand, 26652768 - 26652541
Alignment:
131 ctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataa 230  Q
    ||||||| ||||||||||||| ||||||||| ||||| ||||||||   | ||  |||||||||| | ||| ||||| |  | |||||||||||| || |    
26652768 ctacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaacttctaactagcactattaggtcttgatcacaccatatca 26652669  T
231 gtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaat 330  Q
    || | |  || || |||||||||||||||  | | ||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |    
26652668 gttc-agaaccct-tgtattatcaacctcggtggacttctacaattcttgatcacacaagaaaggttgtaactcttctatctcaaactattaagcccagt 26652571  T
331 agacttaagacctagctttacactttgtatg 361  Q
    |||||| ||| |||| |||||||||||||||    
26652570 agacttgagatctag-tttacactttgtatg 26652541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 361
Target Start/End: Complemental strand, 26924353 - 26924126
Alignment:
131 ctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataa 230  Q
    ||||||| ||||||||||||| ||||||||| ||||| ||||||||   | ||  |||||||||| | ||| ||||| |  | |||||||||||| || |    
26924353 ctacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaacttctaactagcactattaggtcttgatcacaccatatca 26924254  T
231 gtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaat 330  Q
    || | |  || || |||||||||||||||  | | ||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |    
26924253 gttc-agaaccct-tgtattatcaacctcggtggacttctacaattcttgatcacacaagaaaggttgtaactcttctatctcaaactattaagcccagt 26924156  T
331 agacttaagacctagctttacactttgtatg 361  Q
    |||||| ||| |||| |||||||||||||||    
26924155 agacttgagatctag-tttacactttgtatg 26924126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 30454205 - 30454448
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
30454205 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 30454304  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| |||||| | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
30454305 gactagcactacaatttcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 30454402  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
30454403 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 30454448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 18569223 - 18569042
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
18569223 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 18569124  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| ||||||||||    
18569123 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctt 18569042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 33955504 - 33955754
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
33955504 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 33955603  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||| ||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
33955604 accaacactataaggtcttgatcacaccagatcagtacg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 33955701  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
33955702 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 33955754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 30459263 - 30459506
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
30459263 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 30459362  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| |||||| | |||| ||||||||||||||||   |||||| |||||||| |||  ||    || |||    
30459363 gactagcactacaatttcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcggcaggcttatacaattctttgcacactagcaaaag 30459460  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
30459461 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 30459506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 22489369 - 22489126
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||| |    
22489369 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttat 22489270  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||||||  | ||||||||||||||| |||||| |||||| |||||||||||||||||  || ||| |||||||| |||  ||    || |||    
22489269 gactagcactataagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcagacttctacaattctttgcacactagcaaaag 22489172  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
22489171 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 22489126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 20036176 - 20035932
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||| |||||||| ||||| |||  |||||||||| ||||||||||| |  |||||||||||||| ||||||||   |||   |||||||||| |  |      
20036176 gagagttatcctggttcaccaaacccggctacttccagtccccacacatcatgtgagattatccactatagtatacagttggtagaaacttctaaccaac 20036077  T
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttgg 299  Q
    |||||||  | ||||||||||||||| ||||| || || | || |||||||||||| |  |||||| ||||||||||     || ||||| |||||||||    
20036076 actataaggtcttgatcacaccagatcagtcc-ataac-cactatattatcaaccttagcaggcttctacaattctttgctttcgcacaaaaaaggttgg 20035979  T
300 aacaattc-tatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||  ||| ||||||||||||||||||||||||||||| ||| ||||    
20035978 aactcttcctatctcaaactattaagcccaatagacttgagatctag 20035932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 96 - 345
Target Start/End: Complemental strand, 20834615 - 20834364
Alignment:
96 cacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttct 195  Q
    |||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||  ||||||||||||||| ||||||||   |||   ||||||||||    
20834615 cacacaggagagttatcctggttcaccaaacccggctacttccagtccccacactccgtgtgagattatccactatagtatgcagttggtagaaacttct 20834516  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaa 292  Q
     |  |  |||||||  | ||||||| ||||||| ||| ||  ||  | |||||| ||||||||||  |||||| | ||||||||     || ||||||||    
20834515 aaccaacactataaggtcttgatcataccagatcagttcg--taaccactgtataatcaacctcagcaggcttctccaattctttgctttcgcacaagaa 20834418  T
293 aggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    ||||||||||  || |||| ||||||||||||||||||||||||| ||| ||||    
20834417 aggttggaactcttcctatgtcaaactattaagcccaatagacttgagatctag 20834364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 22448334 - 22448413
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 176  Q
    |||||||||| |||||||| |||||  ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
22448334 acacaagagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat 22448413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 256
Target Start/End: Original strand, 22118140 - 22118265
Alignment:
131 ctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagata 229  Q
    ||||||| ||||||||||| | ||||||||||||||||||||| | || || || ||||||||||||||||  |||||||  | |||||||||||||||     
22118140 ctacttccagtccccacacctcgtgtgagattatccattatagttgtcttgctaacagaaacttctgaataacactataaggtcttgatcacaccagatc 22118239  T
230 agtccgattacactctgtattatcaac 256  Q
    |||| | |||||  |||||||||||||    
22118240 agtctg-ttacatcctgtattatcaac 22118265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 13815377 - 13815617
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| |||||||||||||  |||||||||||||| ||||||||   |||   ||||||||||     
13815377 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcatgtgagattatccactatagtattcagttggtagaaacttcta 13815476  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 292  Q
    |  |  |||||||  | ||||||||||||||| | || | | || || ||||||||||||||||| |||||| |||||||||||     |  || |||||    
13815477 accaacactataaggtcttgatcacaccagatcattctg-taaccct-tgtattatcaacctcaacaggcttcttacaattctttgcactagcaaaagaa 13815574  T
293 aggttggaacaattctatctcaaactattaagcccaatagactt 336  Q
    |||||||||   |||||||| |||||||||||||||||| ||||    
13815575 aggttggaa-ttttctatcttaaactattaagcccaataaactt 13815617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 365
Target Start/End: Original strand, 24244053 - 24244316
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||  ||||||||||| |  |      
24244053 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatcaac 24244152  T
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattcttga---tcacacaagaaaggttg 298  Q
    |||| ||  | ||||||||||| ||| |||  |  ||  |||||||||||||||||||  ||| || |||||||||||     |  || |||||||||||    
24244153 actacaacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggattcttacaattctttgcactagcaaaagaaaggttg 24244250  T
299 gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 365  Q
    |||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
24244251 gaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 24244316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 365
Target Start/End: Original strand, 24290677 - 24290940
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||  ||||||||||| |  |      
24290677 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatcaac 24290776  T
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattcttga---tcacacaagaaaggttg 298  Q
    |||| ||  | ||||||||||| ||| |||  |  ||  |||||||||||||||||||  ||| || |||||||||||     |  || |||||||||||    
24290777 actacaacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggattcttacaattctttgcactagcaaaagaaaggttg 24290874  T
299 gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 365  Q
    |||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
24290875 gaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 24290940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 37514863 - 37514943
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatc 177  Q
    ||||| ||||||||| ||| ||||  |||  |||||||||||||||||||||| ||||||||||||||||| |||||||||    
37514863 acacatgagatttatactggttcatcaaagccggctacttctagtccccacaccttgtgtgagattatccactatagtatc 37514943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 4636129 - 4635948
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||| ||  ||||||||||| |   ||||||||||||| ||||| | || || || |||||||||||    
4636129 acacatgagagttatcctggttcaccaaacccggctattttcagtccccacacctcacgtgagattatccactatagttgtcttgctaacagaaacttct 4636030  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    ||  || |||||||  | |||||||||||| || |||||| |||||| |||| ||||||||||||  |||||| ||||||||||    
4636029 gaccagcactataagatcttgatcacaccatatcagtccg-ttacac-ctgttttatcaacctcagcaggcttctacaattctt 4635948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 1693703 - 1693748
Alignment:
129 ggctacttctagtccccacactttgtgtgagattatccattatagt 174  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||    
1693703 ggctacgtctagtccccacactttgtgtgagattttccattatagt 1693748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 276
Target Start/End: Complemental strand, 16111037 - 16110887
Alignment:
128 cggctacttctagtccccacactttgtgtgagatt---atccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacacc 224  Q
    |||||||||| |||||| |||||| ||||||||||   ||||||||||||||| |  ||||| ||||||  |||||  ||||||  || |||||||||||    
16111037 cggctacttccagtcccgacacttcgtgtgagattaccatccattatagtatcctactatcaaaaactttggaataacactatatgttcttgatcacacc 16110938  T
225 agataagtccgattacactctgtattatcaacctcaataggcttttacaatt 276  Q
    |||  | || | ||||| |||||||||||||| |||| ||| || |||||||    
16110937 agaccaatctg-ttacattctgtattatcaacatcaacaggtttatacaatt 16110887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 22457797 - 22457843
Alignment:
307 ctatctcaaactattaagcccaatagacttaagacctagctttacact 354  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||    
22457797 ctatctcaaactattaagcccaatagacttaagatctag-tttacact 22457843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 17553829 - 17553874
Alignment:
129 ggctacttctagtccccacactttgtgtgagattatccattatagt 174  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||    
17553829 ggctacgtctagtccccacactttgtgtgagattttccactatagt 17553874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 17553934 - 17554025
Alignment:
236 attacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagact 335  Q
    ||||||| ||||||| | ||||| | |||| || |||||||||||| ||||||||||||||     ||    ||||||||||||||||||||||||||||    
17553934 attacaccctgtattgttaaccttagtaggtttctacaattcttgagcacacaagaaaggt-----ca----tatctcaaactattaagcccaatagact 17554024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 22448479 - 22448525
Alignment:
307 ctatctcaaactattaagcccaatagacttaagacctagctttacact 354  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||    
22448479 ctatctcaaactattaagcccaatagactttagatctag-tttacact 22448525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 4e-57; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 97 - 361
Target Start/End: Original strand, 31575415 - 31575676
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    |||||||||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   | ||  ||||||||||     
31575415 acacaagagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaacttcta 31575514  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggt 296  Q
    | ||| |||||||  | |||||||||||| || ||||| |  || | |||||||||||||||||  | |||| |||||||||||||||||||||||||||    
31575515 actagcactataaggtcttgatcacaccaaatcagtcc-agaaccc-ctgtattatcaacctcagcaagcttctacaattcttgatcacacaagaaaggt 31575612  T
297 tggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatg 361  Q
    ||||||  |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
31575613 tggaactcttctatctcaaactattaagcccaatagacttgagatctag-tttacactttgtatg 31575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 86 - 279
Target Start/End: Complemental strand, 15834145 - 15833953
Alignment:
86 gaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatc 185  Q
    ||||||| || |||||||||||||||| || ||||| |||| |||||||||  ||||| ||||| | |||||||||||||||||||||||||||| || |    
15834145 gaagaattataacacaagagatttatcttggttcaccaaatccggctactttcagtccacacacctcgtgtgagattatccattatagtatcatgctaac 15834046  T
186 agaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
     ||||||||||| ||| ||||||| || |||| || ||||||||||| || |||| | ||||||||||||| ||| |||| || ||||||||||    
15834045 tgaaacttctgactagcactataagttcttgaccataccagataagttcg-ttactccctgtattatcaacatcagtaggtttctacaattctt 15833953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 345
Target Start/End: Original strand, 42712182 - 42712432
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
42712182 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 42712281  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
42712282 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 42712379  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
42712380 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 42712432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 12925537 - 12925287
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  || ||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
12925537 acacaggagagttatcctggttcacgaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 12925438  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattct---tgatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| |||||||||   |  || |||||||||    
12925437 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgttttcgcacaagaaa 12925340  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
12925339 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 12925287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 20030362 - 20030112
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    |||||||||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   | ||||||||     
20030362 acacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaacttcta 20030263  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
20030262 accaacactataaggtcttgatcacaccagatcagtccg--taatccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 20030165  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||| ||||||||| ||| ||||    
20030164 ggttggaactcttcctatctcaaactattaagccaaatagacttgagatctag 20030112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 336
Target Start/End: Original strand, 7789068 - 7789325
Alignment:
83 agagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgt 181  Q
    |||||||||  || ||||| |||| |||| ||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || ||     
7789068 agagaagaagaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgc 7789167  T
182 tatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttg 280  Q
    || ||||||||||||| ||| |||| ||||| ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||| |||    
7789168 taacagaaacttctgactagcactacaatttcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttatacaattctttg 7789265  T
281 atca----cacaagaaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
      ||    || ||||||||||||||   ||||||||| |||||||||||||||||||||||    
7789266 cacactagcaaaagaaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 7789325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 20045001 - 20044751
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  ||||||| || ||||||||||||| |||||||||||||||  |||||||   |||   ||||||||||     
20045001 acacatgagagttatcctggttcaccaaacccggctacatccagtccccacacttcgtgtgagattatccacgatagtatacagttggtagaaacttcta 20044902  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
20044901 accaacactataaggtcttgatcacaccagatcagtccg--taacccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 20044804  T
294 ggttggaacaattc-tatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  ||| ||||||||||||||||||||||||||||| ||| ||||    
20044803 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 20044751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 20714253 - 20714072
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | |||||| |||||||||||||| | || || || |||||||||||    
20714253 acacatgagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgacattatccattatagttgtcttgctaacagaaacttct 20714154  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    || ||| |||||||  | ||||||||||||||| |||| | |||||| |||||||||||||||||  |||||| ||||||||||    
20714153 gactagcactataagatcttgatcacaccagatcagtctg-ttacac-ctgtattatcaacctcagcaggcttctacaattctt 20714072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 365
Target Start/End: Original strand, 18883164 - 18883433
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||| ||||     
18883164 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaaattcta 18883263  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 292  Q
    |  |  |||||||  | ||||||||||||||| ||| ||  ||| |||||||||||||||||||  |||||| |||||||||||     |  || |||||    
18883264 accaacactataaagtcttgatcacaccagatcagttcg--taccctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaa 18883361  T
293 aggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 365  Q
    |||||||||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
18883362 aggttggaa-ttttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 18883433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 365
Target Start/End: Original strand, 18143433 - 18143702
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| ||||| || ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||| ||   |||   | ||||||||     
18143433 acacaggagagttatcttggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagcattcagttggtaaaaacttcta 18143532  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 292  Q
    |  |  |||||||  | ||||||||||||||| |||| | | || || |||||||||||||||| ||||||| |||||||||||     |  || |||||    
18143533 accaacactataaggtcttgatcacaccagatcagtctg-taaccct-tgtattatcaacctcagtaggcttcttacaattctttgcactagcaaaagaa 18143630  T
293 aggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 365  Q
    |||||||||   |||||||||||||||||||||||||||||||| ||| |||  || || |||||||||||||    
18143631 aggttggaa-ttttctatctcaaactattaagcccaatagacttgagaactaaattcacgctttgtatggtga 18143702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 25051067 - 25051307
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    |||||||||| ||||| || |||||  |||  ||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
25051067 acacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttcta 25051166  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 292  Q
    |  |  |||||||| | ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||||||     |  || |||||    
25051167 accaacactataatgtcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaa 25051264  T
293 aggttggaacaattctatctcaaactattaagcccaatagactt 336  Q
    |||||||||   ||||||||||||||||||||||||||| ||||    
25051265 aggttggaa-ttttctatctcaaactattaagcccaatatactt 25051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 365
Target Start/End: Complemental strand, 18252006 - 18251743
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||| |||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||  ||||||||||| |  |      
18252006 gagagttatcctgattcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaaccaac 18251907  T
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaaaggttg 298  Q
    |||||||  | ||||||||||| ||| |||  |  ||  |||||||||||||||||||  ||| || |||||||||||     |  || |||||||||||    
18251906 actataacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggattcttacaattctttgcactagcaaaagaaaggttg 18251809  T
299 gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 365  Q
    |||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
18251808 gaa-ttttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 18251743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 25037030 - 25037270
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    |||||||||| ||||| || |||||  |||  ||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
25037030 acacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttcta 25037129  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 292  Q
    |  |  |||||||  | ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||||||     |  || |||||    
25037130 accaacactataaagtcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaa 25037227  T
293 aggttggaacaattctatctcaaactattaagcccaatagactt 336  Q
    |||||||||   ||||||||||||||||||||||||||| ||||    
25037228 aggttggaa-ttttctatctcaaactattaagcccaatatactt 25037270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 4843732 - 4843805
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 176  Q
    |||| |||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
4843732 gagagttatcctggttcactaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat 4843805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 139 - 345
Target Start/End: Complemental strand, 12767772 - 12767564
Alignment:
139 agtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt 238  Q
    |||||||||| || ||||||||||||||| ||||||||   |||   |||||||||| |  |  |||||||  | ||||||||||||||| ||||||  |    
12767772 agtccccacatttcgtgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtccg--t 12767675  T
239 acactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-tatctcaaactattaagcccaatagac 334  Q
    |  | |||||||||||||||||  |||||| ||||||||||     || ||||||||||||||||||  ||| |||||||||||||||||| ||||||||    
12767674 aacccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttggaactcttcctatctcaaactattaagctcaatagac 12767575  T
335 ttaagacctag 345  Q
    || ||| ||||    
12767574 ttgagatctag 12767564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 18233104 - 18233031
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 176  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
18233104 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat 18233031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 18242555 - 18242482
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 176  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
18242555 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat 18242482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 12915642 - 12915563
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 176  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
12915642 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtat 12915563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 33592138 - 33592215
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 174  Q
    ||||| |||| |||||||| |||||  ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||    
33592138 acacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 33592215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 33601777 - 33601854
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 174  Q
    ||||| |||| |||||||| |||||  ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||    
33601777 acacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 33601854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 24096079 - 24096217
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtcccc-acactttgtgtgagattatccattatagtatcatgttatcagaaacttct 195  Q
    ||||| ||||||||| ||| ||||| ||| ||| ||||||| ||||||| |||| | ||||||||||||||| ||||||||| || || || |||||| |    
24096079 acacaggagatttattctggttcaccaaactcgactacttccagtcccccacacctcgtgtgagattatccactatagtatcttgctaacataaactttt 24096178  T
196 gaatagaactataatttgttgatcacaccagataagtcc 234  Q
    || ||| |||| || || ||||| |||||| || |||||    
24096179 gactagcactacaagttcttgattacaccatatcagtcc 24096217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 24634117 - 24634014
Alignment:
131 ctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataa 230  Q
    ||||||| ||||||||||||| |||||| |||||||| ||||||||   | ||  |||||||||| | ||| |||||||  | ||||||||||||||| |    
24634117 ctacttccagtccccacacttcgtgtgatattatccactatagtattcagctagtagaaacttctaactagcactataaggtcttgatcacaccagatca 24634018  T
231 gtcc 234  Q
    ||||    
24634017 gtcc 24634014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 18232917 - 18232841
Alignment:
288 aagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 365  Q
    ||||||||||||||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
18232917 aagaaaggttggaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 18232841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 18242368 - 18242292
Alignment:
288 aagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 365  Q
    ||||||||||||||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
18242368 aagaaaggttggaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 18242292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 42896184 - 42896229
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatag 173  Q
    |||||||||| |||| |||||||| ||||||||||||||| |||||    
42896184 cggctacttccagtctccacacttcgtgtgagattatccactatag 42896229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 4843921 - 4843968
Alignment:
288 aagaaaggttggaacaattctatctcaaactattaagcccaatagactt 336  Q
    ||||||||||||||   |||||||||||||||||||| |||||||||||    
4843921 aagaaaggttggaatt-ttctatctcaaactattaaggccaatagactt 4843968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 70 - 364
Target Start/End: Complemental strand, 54624863 - 54624581
Alignment:
70 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 168  Q
    |||| ||||||||||||||||| ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
54624863 aaattaagagatgagagaagaaagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 54624765  T
169 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 268  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||||||| ||||||| |||| | ||||||||||||||||||||||||  ||||||    
54624764 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcataccagatcagtctg-ttacactctgtattatcaacctcagcaggctt 54624666  T
269 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg 364  Q
     ||| ||||||||||||||||||||         |  ||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
54624665 ctacgattcttgatcacacaagaaa---------agatctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg 54624581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 70 - 336
Target Start/End: Original strand, 17529838 - 17530094
Alignment:
70 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 168  Q
    |||| ||||||||||||||||  ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
17529838 aaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 17529936  T
169 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 268  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||    
17529937 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtccg-ttacactctgtattatcaacctcagcaggctt 17530035  T
269 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagactt 336  Q
     ||| ||||||||||||||||||||         | ||||||||||||||||||||||||||||||||    
17530036 ctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagactt 17530094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 68 - 293
Target Start/End: Complemental strand, 32878080 - 32877856
Alignment:
68 aaaaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatcc 166  Q
    |||||| ||||||||||||||||  ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  ||||||||||||||    
32878080 aaaaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatcc 32877982  T
167 attatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggc 266  Q
    | |||||||||||| ||||| |||||||||||||  |||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||  ||||    
32877981 actatagtatcatgctatcataaacttctgaataacactataatttgttgatcacaccagatcagtctg-ttacactctgtattatcaacctcagcaggc 32877883  T
267 ttttacaattcttgatcacacaagaaa 293  Q
    || ||| ||||||||||||||||||||    
32877882 ttctacgattcttgatcacacaagaaa 32877856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 48978816 - 48978622
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    ||||||| || ||||||||||||  ||||||||||||||| |||||||||     ||||||||||||||||||| |||||||| ||||||||||||||||    
48978816 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcc----atcagaaacttctgaatagcactataatatgttgatcacaccaga 48978721  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 327  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
48978720 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 48978631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 48988356 - 48988162
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    ||||||| || ||||||||||||  ||||||||||||||| |||||||||     ||||||||||||||||||| |||||||| ||||||||||||||||    
48988356 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcc----atcagaaacttctgaatagcactataatatgttgatcacaccaga 48988261  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 327  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
48988260 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 48988171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 41 - 336
Target Start/End: Complemental strand, 19389002 - 19388712
Alignment:
41 gtgatagtgtgtgaaatgtgttaaatgaaaaataaagagatgagagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctag 140  Q
    ||||||||||||||| |||||||| | |||| ||| ||||| ||||||||| ||  ||||||||| ||||||||| ||||| ||| ||||||||||| ||    
19389002 gtgatagtgtgtgaagtgtgttaagttaaaattaa-gagataagagaagaaagagaacacaagagttttatcctggttcaccaaaatcggctacttcaag 19388904  T
141 tccccacactttgtgtgagattatccattatagta-tcatgt-tatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt 238  Q
    ||||||||||| ||||||||||||| | ||||||| |||  | ||||| |||||||||||||| ||||||| |||||||| |||||| || |||| ||||    
19388903 tccccacacttcgtgtgagattatcgactatagtattcagctatatcataaacttctgaatagcactataagttgttgatgacaccatatcagtctgatt 19388804  T
239 acactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaagg-ttggaacaattc-tatctcaaactattaagcccaatagactt 336  Q
     |||| |||||||| | |||||  ||||        ||| ||||||||||||||||| ||| ||||| || |||||||||||| ||| || |||||||||    
19388803 gcactatgtattattatcctcagcaggc--------ttcatgatcacacaagaaaggtttgaaacaactcttatctcaaactactaatcctaatagactt 19388712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 24794550 - 24794793
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
24794550 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 24794649  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
24794650 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 24794747  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
24794748 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 24794793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 28367657 - 28367900
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
28367657 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 28367756  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||| | ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
28367757 gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 28367854  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
28367855 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 28367900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 28375475 - 28375718
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
28375475 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 28375574  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||| | ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
28375575 gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 28375672  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
28375673 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 28375718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 28383297 - 28383540
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
28383297 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 28383396  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||| | ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
28383397 gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 28383494  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
28383495 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 28383540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 28351724 - 28351967
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||| ||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
28351724 acacaggagagttatgctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 28351823  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||| | ||||||||||||||| ||||||  ||  ||||||||||||||||| |  |||||| |||||||| |||  ||    || |||    
28351824 gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaaccttagcaggcttatacaattctttgcacactagcaaaag 28351921  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
28351922 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 28351967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 5385873 - 5385623
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat-catgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||  | || ||||||||||    
5385873 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagctgat-agaaacttct 5385775  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaa 292  Q
     |  |  |||||||  | ||||||||||||||| |||  |  ||  | |||||| ||||||||||  |||||| ||||||||||     || ||||||||    
5385774 aaccaacactataaggtcttgatcacaccagatcagtatg--taaccactgtatcatcaacctcagcaggcttctacaattctttgctttcgcacaagaa 5385677  T
293 aggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    ||||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
5385676 aggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 5385623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 279
Target Start/End: Original strand, 38529212 - 38529362
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccag 226  Q
    |||||||||| ||| ||||||| | ||||||||||||||| ||||| | || || || |||||| |||||| ||| |||||||  | |||||||||||||    
38529212 cggctacttccagtgcccacacctcgtgtgagattatccactatagttgtcttgctaacagaaatttctgactagcactataagatcttgatcacaccag 38529311  T
227 ataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    || |||| | ||||||| |||||||||||||||| ||||||| ||||||||||    
38529312 atgagtctg-ttacact-tgtattatcaacctcagtaggcttctacaattctt 38529362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 87 - 345
Target Start/End: Original strand, 13328272 - 13328532
Alignment:
87 aagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatca 186  Q
    |||||| || ||||| |||| ||||| || ||||| |||  || ||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   |    
13328272 aagaataataacacaggagagttatcttggttcaccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatacagttggta 13328371  T
187 gaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatc 283  Q
    ||||||||| |  |  ||||| |  | ||||||||||||||| |||||| | || || ||||||||||||||||  | |||| ||||||||||     ||    
13328372 gaaacttctaaccaacactattaggtcttgatcacaccagatcagtccg-taaccct-tgtattatcaacctcagcaagcttctacaattctttgctttc 13328469  T
284 acacaagaaaggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
     ||||||||||||||||||  || ||||||||||||||||| |||| ||||||| ||| ||||    
13328470 gcacaagaaaggttggaactcttcctatctcaaactattaatcccagtagacttgagatctag 13328532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 128 - 345
Target Start/End: Original strand, 46305609 - 46305827
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    |||||||||| ||||||||||||| || |||||||||||| | ||||||   |||   |||||||||| |  |  |||||||  | ||||||||||||||    
46305609 cggctacttccagtccccacacttcgt-tgagattatccactttagtatacagttggtagaaacttctaaccaacactataaggtcttgatcacaccaga 46305707  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-tatctcaaactattaa 323  Q
    | |||| |  ||  | |||||||||||||||||  |||||| ||||||||||     || ||||||||||||||||||  ||| ||||||||||||||||    
46305708 tcagtctg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttggaactcttcctatctcaaactattaa 46305805  T
324 gcccaatagacttaagacctag 345  Q
    ||||||||||||| ||| ||||    
46305806 gcccaatagacttgagatctag 46305827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 334
Target Start/End: Complemental strand, 4951777 - 4951537
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattata-gtatcatgttatcagaaacttct 195  Q
    ||||| |||| ||||| || ||||| ||| ||| ||||||| ||||| ||||| | ||||||||||||||| ||||  | || || || |||||| ||||    
4951777 acacatgagagttatcttggttcaccaaactcgactacttcaagtcctcacacctcgtgtgagattatccactatatttgtcttgctaacagaaatttct 4951678  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacac------aa 289  Q
    || ||| |||| ||  | ||| ||||||||||| |||| | |||||| |||||||||||||||||| || ||| |||||||||| | |||||      ||    
4951677 gactagcactacaaggtattggtcacaccagatcagtctg-ttacac-ctgtattatcaacctcaacagccttctacaattcttta-cacactagcaaaa 4951581  T
290 gaaaggttggaacaattctatctcaaactattaagcccaatagac 334  Q
    |||||||| |||   |||||||||||||||||||||| |||||||    
4951580 gaaaggtt-gaaattttctatctcaaactattaagccaaatagac 4951537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 345
Target Start/End: Complemental strand, 23487182 - 23486974
Alignment:
139 agtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt 238  Q
    |||||||||| || ||||||||||||||| ||||||||   |||   |||||||||| |  |  |||||||  | ||||||||||||||| |||| | |     
23487182 agtccccacatttcgtgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtctg-ta 23487084  T
239 acactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-tatctcaaactattaagcccaatagac 334  Q
    || || ||||||||||||||||  |||||| ||||||||||     |  |||||||||| |||||||  ||| |||||||||||||||||||||||||||    
23487083 accct-tgtattatcaacctcagcaggcttctacaattctttgcttttgcacaagaaagcttggaactcttcctatctcaaactattaagcccaatagac 23486985  T
335 ttaagacctag 345  Q
    || ||| ||||    
23486984 ttgagatctag 23486974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 4361520 - 4361618
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttct 195  Q
    ||||||||||||||||||| |||| ||||| ||| || ||   ||| |||||| | ||||||||||||||||||||||||| || || || ||||||||    
4361520 acacaagagatttatcctggttcattaaatccggttattttcggtctccacacctcgtgtgagattatccattatagtatcctgctaacaaaaacttct 4361618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 320
Target Start/End: Original strand, 7784100 - 7784237
Alignment:
185 cagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---ga 281  Q
    ||||||||| ||| ||  |||||||  | ||||||||||||||| |||| | |||||| |||||||||||||||||  |||||| ||||||||||         
7784100 cagaaacttatgactaacactataaggtcttgatcacaccagatcagtctg-ttacaccctgtattatcaacctcagcaggcttctacaattcttttcct 7784198  T
282 tcacacaagaaaggttggaacaattctatctcaaactat 320  Q
    ||  |||||||||||||  |||||||| |||||||||||    
7784199 tcctacaagaaaggttgttacaattctttctcaaactat 7784237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 336
Target Start/End: Original strand, 17535002 - 17535033
Alignment:
305 ttctatctcaaactattaagcccaatagactt 336  Q
    ||||||||||||||||||||||||||||||||    
17535002 ttctatctcaaactattaagcccaatagactt 17535033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 109; Significance: 1e-54; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 70 - 364
Target Start/End: Complemental strand, 100191 - 99909
Alignment:
70 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 168  Q
    |||| ||||||||||||||||  ||  |||||||||| ||||||||| ||| |  ||  ||||||  || ||||||||||||  ||||||||||||||||    
100191 aaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctatgtccagtccccacactacgtgtgagattatccat 100093  T
169 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 268  Q
    ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||| || |||| | ||||||||||||||||||||||||| | ||||    
100092 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaaatcagtctg-ttacactctgtattatcaacctcaacaagctt 99994  T
269 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg 364  Q
     ||  ||||||||||||||||||||         | |||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
99993 ctatgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg 99909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 345
Target Start/End: Complemental strand, 143235 - 143102
Alignment:
214 ttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-ta 309  Q
    ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || ||||||||||||||||||  ||| ||    
143235 ttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttggaactcttccta 143138  T
310 tctcaaactattaagcccaatagacttaagacctag 345  Q
    ||||||||||||||||||||||||||| ||| ||||    
143137 tctcaaactattaagcccaatagacttgagatctag 143102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 124230 - 124050
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||  |||| | | |||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
124230 acacaggagagttatcctggttcatcaaatcctgttacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 124131  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||    
124130 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctt 124050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 180889 - 180832
Alignment:
305 ttctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg 364  Q
    |||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
180889 ttctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg 180832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 1800643 - 1800445
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    ||||||| || ||||||||||||  ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||    
1800643 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga 1800544  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 327  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
1800543 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 1800454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 70 - 336
Target Start/End: Complemental strand, 22632610 - 22632354
Alignment:
70 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 168  Q
    |||| ||||||||||||||||  ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
22632610 aaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 22632512  T
169 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 268  Q
    ||||||||| || |||||||||||||||| ||  |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||    
22632511 tatagtatcctgctatcagaaacttctgactaacactataatatgttgatcacaccagatcagtccg-ttacactctgtattatcaacctcagcaggctt 22632413  T
269 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagactt 336  Q
     ||| ||||||||||||||||||||         | ||||||||||||||||||||||||||||||||    
22632412 ctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagactt 22632354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 1791145 - 1790951
Alignment:
128 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 227  Q
    ||||||| || ||||||||||||  ||||||||||||||| |||||||||     ||||||||||||||||||| |||||||| ||||||||||||||||    
1791145 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcc----atcagaaacttctgaatagcactataatatgttgatcacaccaga 1791050  T
228 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 327  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
1791049 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 1790960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 35877693 - 35877449
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   |||||||||| |  |      
35877693 gagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaac 35877594  T
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttgg 299  Q
    |||||||  | ||||||||||||||| ||| ||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||||||||    
35877593 actataaggtcttgatcacaccagatcagttcg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttgg 35877496  T
300 aacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||  || |||||||||||||||||||||||||||||| ||| ||||    
35877495 aactcttcctatctcaaactattaagcccaatagacttgagatctag 35877449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 35885182 - 35884938
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   |||||||||| |  |      
35885182 gagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaac 35885083  T
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttgg 299  Q
    |||||||  | ||||||||||||||| ||| ||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||||||||    
35885082 actataaggtcttgatcacaccagatcagttcg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttgg 35884985  T
300 aacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||  || |||||||||||||||||||||||||||||| ||| ||||    
35884984 aactcttcctatctcaaactattaagcccaatagacttgagatctag 35884938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 36724895 - 36724651
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   |||||||||| |  |      
36724895 gagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaac 36724796  T
203 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttgg 299  Q
    |||||||  | ||||||||||||||| ||| ||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||||||||    
36724795 actataaggtcttgatcacaccagatcagttcg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttgg 36724698  T
300 aacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||  || |||||||||||||||||||||||||||||| ||| ||||    
36724697 aactcttcctatctcaaactattaagcccaatagacttgagatctag 36724651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 279
Target Start/End: Original strand, 31710470 - 31710651
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||  ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
31710470 acacatgagagttatccttgttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct 31710569  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    || ||| |||||||  | ||||||||||||||| |||||| |||||| |||||||||||||||||  || ||| ||||||||||    
31710570 gactagcactataagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcagacttctacaattctt 31710651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 279
Target Start/End: Original strand, 24022752 - 24022927
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagta-tcatgttatcagaaacttctgaatag 201  Q
    |||| |||||||  ||||| |||  |||||||||| | | ||||||| | ||||||||||||||| ||||||  || || || ||||||||||||| |||    
24022752 gagagttatcctcgttcaccaaacccggctacttccaattcccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctgactag 24022851  T
202 aactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
     |||||||  | ||||||||||||||| |||||| |||||| |||||||||||||||||| |||||| ||||||||||    
24022852 cactataagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcaacaggcttctacaattctt 24022927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 3397106 - 3396856
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| ||||| || ||||| |||  | |||||||||||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
3397106 acacaggagagttatcatggttcaccaaacccagctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaacttcta 3397007  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  |  ||||||||||||||||  || ||| || |||||||     || |||||||||    
3397006 accaacactataaggtcttgatcacaccagatcagtccg--taaccattgtattatcaacctcagcagacttctaaaattctttgctttcgcacaagaaa 3396909  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
3396908 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 3396856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 14273388 - 14273146
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||  |||| |||||| | ||||||||||||||| ||||| | || || || |||||||||||    
14273388 acacacgagaattatcctggttcaccaaacccggctactttcagtctccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct 14273289  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||||||  | || ||||||||| || |||| | |||||| || ||||||||||||||  |||||| |||||||| |||  ||    || |||    
14273288 gactagcactataagatcttaatcacaccatatcagtctg-ttacac-ctatattatcaacctcagcaggcttctacaattctttgcacactagcaaaag 14273191  T
291 aaaggttggaacaattctatctcaaactattaagcccaatagactt 336  Q
    ||| |||||||   |||||||| |||||||||||||||||||||||    
14273190 aaatgttggaa-ttttctatcttaaactattaagcccaatagactt 14273146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 16446736 - 16446668
Alignment:
108 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 176  Q
    ||||||||  ||||||||| || ||||||  |||||||||| || ||||||||||||||| ||||||||    
16446736 ttatcctggatcactaaatccgactactttcagtccccacatttcgtgtgagattatccactatagtat 16446668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 130 - 363
Target Start/End: Complemental strand, 24741 - 24520
Alignment:
130 gctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagata 229  Q
    ||||| || ||||||||||||  ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||||     
24741 gctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 24642  T
230 agtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaa 329  Q
    |||||| ||||||||||||||||||||||||  |||||| ||| |||||||||||||||         |||| | |||||| |||||||||||| |||||    
24641 agtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacaca---------ggaaaagttctatatcaaactattaaacccaa 24552  T
330 tagacttaagacctagctttacactttgtatggt 363  Q
    ||||||| ||| ||||  ||||||||||||||||    
24551 tagacttgagatctag--ttacactttgtatggt 24520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 70 - 282
Target Start/End: Original strand, 14791 - 15002
Alignment:
70 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 168  Q
    |||| ||||||||||||||||| ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
14791 aaattaagagatgagagaagaaagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 14889  T
169 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 268  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||  ||||||    
14890 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtctg-ttacactctgtattatcaacctcagcaggctt 14988  T
269 ttacaattcttgat 282  Q
     ||| |||||||||    
14989 ctacgattcttgat 15002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 153 - 364
Target Start/End: Complemental strand, 12415189 - 12414990
Alignment:
153 gtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattat 252  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||  |||||||||||||||| |||||| ||||||||||||||||    
12415189 gtgtgagattatccattatagtatcctcttatcagaaacttcttaatagcactataataagttgatcacaccagatcagtccg-ttacactctgtattat 12415091  T
253 caacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttaca 352  Q
     ||||  |  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||||||||||| ||| ||||  |||||    
12415090 taaccatagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagacttgagatctag--ttaca 12415002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 23895620 - 23895863
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
23895620 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 23895719  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||| | ||||||||||||||| |||||| |||||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
23895720 gactagcactacaatatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 23895817  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
23895818 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 23895863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 22066476 - 22066226
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
22066476 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 22066377  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | |||||||||| |||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
22066376 accaacactataaggtcttgatcacactagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 22066279  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
22066278 ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag 22066226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 23884675 - 23884425
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| |||||||||| |||| ||||||||   |||   ||||||||||     
23884675 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattgtccactatagtatgcagttggtagaaacttcta 23884576  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
23884575 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 23884478  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
23884477 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 23884425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 97 - 261
Target Start/End: Original strand, 10259783 - 10259946
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||| ||| ||||| |||| | |||||||| ||||| ||||||| ||||| |||| |||| ||||||||| || ||  |||||||||||    
10259783 acacaggagaattattctggttcaccaaatccagctacttccagtcctcacacttcgtgtgggattctccactatagtatcctgctaagagaaacttctg 10259882  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaa 261  Q
    | ||| ||||||| || ||||||||||||||| |||||| |||||| ||||||||| ||||||||    
10259883 actagcactataaattcttgatcacaccagatcagtccg-ttacaccctgtattataaacctcaa 10259946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 11421455 - 11421611
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    |||||||| | |||||||  ||||  |||| |||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||| || ||| |||||    
11421455 acacaagataattatcctagttcatcaaatccggctacttccagtccccacacctcgtgtgagattatccactatagtatcatgttaacaaaaaattctg 11421554  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatca 254  Q
    | ||  |||||||  | ||||||||||||||| |||| | ||||||  ||||||||||    
11421555 actaacactataagatcttgatcacaccagatcagtctg-ttacaccatgtattatca 11421611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 12173598 - 12173473
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 202  Q
    |||||||||| |  ||||| ||| ||||||||||  ||||||||||| |||||| |||||||||| |||||||||||| || ||||||||| ||| |||     
12173598 gagatttatcatagttcaccaaactcggctactttcagtccccacaccttgtgtaagattatccactatagtatcatgctaacagaaacttatgactagc 12173499  T
203 actataatttgttgatcacaccagat 228  Q
    || |||| || |||||||||||||||    
12173498 accataaattcttgatcacaccagat 12173473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 336
Target Start/End: Complemental strand, 18420724 - 18420492
Alignment:
108 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaacta 206  Q
    |||||||| ||||| |||  |||||||||| |||||| |||| | |||||||||||| || ||||| | || || || ||||||||||||| ||| ||||    
18420724 ttatcctggttcacaaaacccggctacttccagtcccgacacctcgtgtgagattatacactatagttttcttgctaacagaaacttctgactagcacta 18420625  T
207 taatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt-----gatcacacaagaaaggttggaa 301  Q
      |  | ||||||||||||||| |||||| |||||| |||||||||||||||||  |||||| ||||||||||      ||  || ||||||||||||||    
18420624 acaaatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatacaattctttgcacaatagcaaaagaaaggttggaa 18420527  T
302 caattctatct-caaactattaagcccaatagactt 336  Q
       |||||||| ||||||||||||||||||||||||    
18420526 -ttttctatctccaaactattaagcccaatagactt 18420492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 279
Target Start/End: Original strand, 23110256 - 23110404
Alignment:
130 gctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagata 229  Q
    |||||||| |||||||||||   |||| |||||||||| ||||||||   | || ||||||||||||| ||| ||||||  || ||||||||||||||||    
23110256 gctacttccagtccccacaccccgtgttagattatccactatagtattcggctaacagaaacttctgactagcactatatgttcttgatcacaccagata 23110355  T
230 agtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    ||| | ||||||| |  |||||||||| |||| |||||| || |||||||    
23110356 agt-ctattacacccaatattatcaacatcaacaggcttctaaaattctt 23110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 345
Target Start/End: Original strand, 17512238 - 17512476
Alignment:
108 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactat 207  Q
    |||||||| ||||| ||| ||||||||||  |||||||||||||  |||||||||||||| ||||||||   |||   |||||||||| |  |  |||||    
17512238 ttatcctggttcaccaaactcggctactttcagtccccacacttcttgtgagattatccactatagtatacagttggtagaaacttctaaccaacactat 17512337  T
208 aatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgat---cacacaagaaaggttggaacaa 304  Q
    ||  | |||||||||| |||| |||| |  || || ||||||||||||||| |  |||||| ||||||||||  |   | ||| ||||||||||||||      
17512338 aaagtcttgatcacactagatcagtctg--ta-accctgtattatcaaccttagcaggcttctacaattctttgtttacgcacgagaaaggttggaactt 17512434  T
305 tt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    || |||||| ||||||||||||||||||||||| ||| ||||    
17512435 ttcctatctaaaactattaagcccaatagacttgagatctag 17512476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 279
Target Start/End: Complemental strand, 14102480 - 14102309
Alignment:
108 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaacta 206  Q
    |||||||| ||||| |||  |||||||||| ||||||||||| |  |||||||||||||| ||||| | || || || ||||||||| ||| ||| |||     
14102480 ttatcctggttcaccaaacccggctacttccagtccccacacctcttgtgagattatccactatagttgtcttgctaacagaaacttttgactagcactg 14102381  T
207 taatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    |||  | ||||||||| ||||| || ||  |||||| ||||||||| |||||||  || ||| ||||||||||    
14102380 taaggtcttgatcacaacagatcag-cctgttacaccctgtattattaacctcagcagacttctacaattctt 14102309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 94435 - 94678
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| |||||||||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
94435 acacaggagagttatcctggttcactaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 94534  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
94535 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 94632  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
94633 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 94678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 103876 - 104119
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||| ||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
103876 acacaggagagttatcctggttcaccaaacccggctaattccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 103975  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
103976 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 104073  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
104074 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 104119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 2292 - 2042
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    |||||||||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   | ||||||||     
2292 acacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaacttcta 2193  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
2192 accaacactataaggtcttgatcacaccagatcagtccg--taatccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 2095  T
294 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 345  Q
    |||||||||  || |||||||||||||||||||| ||||||||| ||| ||||    
2094 ggttggaactcttcctatctcaaactattaagccaaatagacttgagatctag 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 336
Target Start/End: Complemental strand, 3731 - 3474
Alignment:
83 agagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgt 181  Q
    |||||||||  || ||||| |||| |||| ||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || ||     
3731 agagaagaagaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgc 3632  T
182 tatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttg 280  Q
    || ||||||||||||| ||| |||| ||||| ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||| |||    
3631 taacagaaacttctgactagcactacaatttcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttatacaattctttg 3534  T
281 atca----cacaagaaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
      ||    || ||||||||||||||   ||||||||| |||||||||||||||||||||||    
3533 cacactagcaaaagaaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 321
Target Start/End: Original strand, 27066 - 27289
Alignment:
106 atttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat----tatagtatcatgttatcagaaacttctgaatag 201  Q
    ||||| ||||| |||| ||| ||||||||||| |||||||| |||| ||||||||||||||||    |||||||||    |||||||||||||| ||||     
27066 atttaacctgactcaccaaagtcggctacttccagtccccatacttcgtgtgagattatccatccactatagtatccaactatcagaaacttcttaataa 27165  T
202 aactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaaaggtt 297  Q
     ||||||  || |||||||||| |||| | | || ||||||||||||||||||||||||  |||||| |||||||||||     || |||||||||||||    
27166 cactatatgttcttgatcacactagatcaattcg-ttacactctgtattatcaacctcagcaggcttattacaattctttgctttcgcacaagaaaggtt 27264  T
298 ggaacaa-ttctatctcaaactatt 321  Q
    ||||||| |||| ||||||||||||    
27265 ggaacaatttctctctcaaactatt 27289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 30827 - 31070
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
30827 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 30926  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||  |||| ||| | ||||||||||||||| |||| | | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
30927 gactaacactacaatattttgatcacaccagatcagtcag-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 31024  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
31025 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 31070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 10225 - 10045
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagta-tcatgttatcagaaacttct 195  Q
    ||||| |||| ||||| || ||||| |||  |||||| ||| |||||||||||   ||||||||||||||| ||||||  || || || |||||||||||    
10225 acacatgagagttatcttggttcaccaaacacggcta-ttccagtccccacaccccgtgtgagattatccactatagttgtcttgctaacagaaacttct 10127  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 279  Q
    || ||| |||||||  | | ||||||||||||| |||| | |||||| ||||||||||||||||||||||||| ||||||||||    
10126 gactagcactataaggtctagatcacaccagatcagtctg-ttacac-ctgtattatcaacctcaataggcttctacaattctt 10045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 408512 - 408269
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 195  Q
    ||||| |||| |||||||| ||||| |||  || ||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
408512 acacaggagagttatcctggttcaccaaacccgtctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 408413  T
196 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 290  Q
    || ||| |||| ||| | ||||||||||||||| |||||| | |||| ||||||||||||||||   |||||| |||||||| |||  ||    || |||    
408412 gactagcactacaatatcttgatcacaccagattagtccg-taacac-ctgtattatcaacctcttcaggcttatacaattctttgcacactagcaaaag 408315  T
291 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 336  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
408314 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 408269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 257141 - 256901
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 196  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||||| |||||| |||||||| ||||||||   |||   ||||||||||     
257141 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgaaattatccactatagtattcagttggtagaaacttcta 257042  T
197 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 292  Q
    |  |  |||||||  | ||||||||||||||| ||| ||  ||  |||||||||||||||||||  | |||| |||||||||||     |  || |||||    
257041 accaacactataaagtcttgatcacaccagatcagttcg--taacctctgtattatcaacctcagcaagcttcttacaattctttgcactagcaaaagaa 256944  T
293 aggttggaacaattctatctcaaactattaagcccaatagactt 336  Q
    |||||||||   ||||||||||||||||| ||||||||||||||    
256943 aggttggaa-ttttctatctcaaactattcagcccaatagactt 256901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 2265 - 2344
Alignment:
97 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 176  Q
    ||||| |||| |||||||| |||||  ||| ||||||||||||||||||||||||  |||||||||||||| ||||||||    
2265 acacaggagagttatcctggttcacccaatccggctacttctagtccccacacttcttgtgagattatccactatagtat 2344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 2410 - 2458
Alignment:
307 ctatctcaaactattaagcccaatagacttaagacctagctttacacttt 356  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||    
2410 ctatctcaaactattaagcccaatagacttgagatctag-tttacacttt 2458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 12558 - 12629
Alignment:
103 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 174  Q
    |||| |||||||| |||||  ||| |||||||||| |||||| |||||| ||||||||||||||| ||||||    
12558 gagagttatcctggttcacccaatccggctacttccagtccctacacttcgtgtgagattatccactatagt 12629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 42161 - 42197
Alignment:
285 cacaagaaaggttggaacaattctatctcaaactatt 321  Q
    ||||||||||||| |||||||||| ||||||||||||    
42161 cacaagaaaggtttgaacaattctttctcaaactatt 42197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University