View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1807_high_1 (Length: 251)
Name: NF1807_high_1
Description: NF1807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1807_high_1 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 1717422 - 1717660
Alignment:
| Q |
1 |
caatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1717422 |
caatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggg |
1717521 |
T |
 |
| Q |
101 |
aaggttcaaaagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggtttaggtggcgtatgagtaaagacttgaaaattgaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1717522 |
aaggttcaaaagtttacaatcacaactaaaaaccacgatgaccaaccacggagaccctttttggtttaggtggcgtatgagtaaagacttgaaaattgaa |
1717621 |
T |
 |
| Q |
201 |
gatgttaggttgacattagactcagctattgatgatttt |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1717622 |
gatgttaggttgacattagactcagctattgatgatttt |
1717660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 19812488 - 19812661
Alignment:
| Q |
1 |
caatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggg |
100 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||| ||||||||| | |||| ||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19812488 |
caattgttgatttgtcaaaatatcctgttggtggtgatagatttcccttggagattactcttcaatcacccttttacttggttcaaatttgggt-ttggg |
19812586 |
T |
 |
| Q |
101 |
a-aggttcaaaagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggtttaggtggc |
174 |
Q |
| |
|
| |||||||||| ||| ||| |||||| | |||| ||| ||| |||||| || |||||||||| ||||||||||| |
|
|
| T |
19812587 |
agaggttcaaaaatttgcaaccacaacaacaaactatgttgatcaaccatggcgacccttttttgtttaggtggc |
19812661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 19849211 - 19849442
Alignment:
| Q |
11 |
tttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaa |
110 |
Q |
| |
|
||||||||||| || ||||||||| ||||||||| | |||| ||| |||| ||||||||||||| ||||||||||||||||||| || ||||||||| |
|
|
| T |
19849211 |
tttgtcaaaatgtcatgttggtggtgatagatttcccttggagattactcttaaatcacccttttatttggttcaaatttgggtgtgggagaggttcaaa |
19849310 |
T |
 |
| Q |
111 |
agtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggtttaggtggcgtatgagtaaagacttgaaaattgaagatgttaggt |
210 |
Q |
| |
|
| ||| ||| |||| | | |||||||| |||||||||| || || ||||| | |||||| |||| || | | | | |||||||||||| ||||||||| |
|
|
| T |
19849311 |
aatttgcaaccacagccacaaaccatgttgaccaaccatggggatcctttattgtttagatggcataaggttcaggccttgaaaattgacaatgttaggt |
19849410 |
T |
 |
| Q |
211 |
tgacattagactcagctattgatgattttctt |
242 |
Q |
| |
|
|| |||||||||| ||||| |||||||||||| |
|
|
| T |
19849411 |
tggcattagactcggctatggatgattttctt |
19849442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 19818766 - 19818938
Alignment:
| Q |
2 |
aatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggga |
101 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| ||||||||| || || ||| |||||||||||||||||| ||||||||||| ||||||| || |
|
|
| T |
19818766 |
aatagttgatttgtcaaaatattctgttggtggtgatagatttcctttagaacttactcttcaatcacccttttatttggttcaaatatgggtgtgggag |
19818865 |
T |
 |
| Q |
102 |
aggttcaaaagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggtttaggtggc |
174 |
Q |
| |
|
|||||||||| | | ||| ||| | | |||||||| ||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
19818866 |
aggttcaaaaatatgcaaccactgccacaaaccatgttgataaaccatggagacccttttttgtttaggtggc |
19818938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 19956299 - 19956412
Alignment:
| Q |
5 |
agttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaagg |
104 |
Q |
| |
|
||||| |||||||||||||||||| ||||| ||||||| | || || ||| |||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
19956299 |
agttgatttgtcaaaatatcctgtgggtggtgatagatatccttcagaacttactcttcaatcacccttttacttggttcaaatttgggtgtgggaaagg |
19956398 |
T |
 |
| Q |
105 |
ttcaaaagtttaca |
118 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
19956399 |
ttcaaaaatttaca |
19956412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 20016108 - 20015873
Alignment:
| Q |
1 |
caatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggg |
100 |
Q |
| |
|
|||| |||| |||||||||||||| ||| ||||| ||||| | | || || |||| |||||||||||| |||| ||||||||||||||||||| || |
|
|
| T |
20016108 |
caattgttgatttgtcaaaatatcatgtgggtggtgataggtatcctttagaagttacacttcaatcacccatttatttggttcaaatttgggtgtggga |
20016009 |
T |
 |
| Q |
101 |
aaggttcaaaagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggtttaggtggcgtatgagtaaagacttgaaaattgaa |
200 |
Q |
| |
|
|||||||||| ||||||| |||||| ||||| ||| ||| || | ||||||||| | ||||||||||| || | | | | ||||||||||| |
|
|
| T |
20016008 |
gaggttcaaaattttacaaccacaac------ccatgttgatcaatcatgaagaccctttattgtttaggtggcataaggttcaggctttgaaaattgac |
20015915 |
T |
 |
| Q |
201 |
gatgttaggttgacattagactcagctattgatgattttctt |
242 |
Q |
| |
|
|||||| | || ||||||||||||||||||||||||||||| |
|
|
| T |
20015914 |
aatgttatggtggcattagactcagctattgatgattttctt |
20015873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 20036510 - 20036275
Alignment:
| Q |
1 |
caatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggg |
100 |
Q |
| |
|
|||| |||| ||||||||||| || ||||||||| |||||| || || || |||| |||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
20036510 |
caattgttgatttgtcaaaatgtcatgttggtggtgatagacttcctttagaagttactcttgaatcacccttttacttggttcaaatttgggtgtggga |
20036411 |
T |
 |
| Q |
101 |
aaggttcaaaagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggtttaggtggcgtatgagtaaagacttgaaaattgaa |
200 |
Q |
| |
|
|||||||||| ||||||| |||||| ||||| || ||||| || |||||||||| ||||||||||| || | ||| ||||| ||||| |
|
|
| T |
20036410 |
gaggttcaaaaatttacaaccacaac------ccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatgattgac |
20036317 |
T |
 |
| Q |
201 |
gatgttaggttgacattagactcagctattgatgattttctt |
242 |
Q |
| |
|
|||||||| || |||||||||| ||||| ||||| |||||| |
|
|
| T |
20036316 |
aatgttaggatggcattagactcggctatggatgactttctt |
20036275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 19838608 - 19838729
Alignment:
| Q |
5 |
agttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaagg |
104 |
Q |
| |
|
||||| |||||||||| ||||||||||| | |||| || | || || |||| |||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
19838608 |
agttgatttgtcaaaacatcctgttggttgtgatacatatcctttagaagttactcttcaatcacccttttacttggttcaaatttgggtgtgggagagg |
19838707 |
T |
 |
| Q |
105 |
ttcaaaagtttacaatcacaac |
126 |
Q |
| |
|
||||||| ||||||| |||||| |
|
|
| T |
19838708 |
ttcaaaaatttacaaccacaac |
19838729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 19989743 - 19989900
Alignment:
| Q |
11 |
tttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggga-aggttcaa |
109 |
Q |
| |
|
|||||||||| |||||||||||| |||||| || | | ||||| || |||||||||||||||||||||||||||| ||||||| |||||| |||||||| |
|
|
| T |
19989743 |
tttgtcaaaacttcctgttggtggtgatagacttcccatggaggctattcttcaatcacccttttacttggttcaagtttgggt-ttgggagaggttcaa |
19989841 |
T |
 |
| Q |
110 |
aagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggtttaggtggc |
174 |
Q |
| |
|
|| ||||||| |||||| ||||| ||| |||| | | ||||||||||| ||||||||||| |
|
|
| T |
19989842 |
aaatttacaaccacaac------ccatgctgatcaactatgaagacccttttttgtttaggtggc |
19989900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 26647240 - 26647337
Alignment:
| Q |
29 |
tggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaagtttacaatcacaac |
126 |
Q |
| |
|
|||||| ||||||| | || ||| |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| |||||| |
|
|
| T |
26647240 |
tggtggtgatagatatcctttggaagttactcttcaatcacccttttacttggttcaaatttgggtgtgggaaaggttcaaaaatttacaaccacaac |
26647337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 26653360 - 26653485
Alignment:
| Q |
1 |
caatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggg |
100 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| ||||||||| || ||| |||| ||| | |||||||||||||||||||||||||||||||| || |
|
|
| T |
26653360 |
caattgttggtttgtcaaaatattatgttggtggtgatagatttcctttggaagttaatctacgatcacccttttacttggttcaaatttgggtgtggga |
26653459 |
T |
 |
| Q |
101 |
aaggttcaaaagtttacaatcacaac |
126 |
Q |
| |
|
||||||| || ||| ||| |||||| |
|
|
| T |
26653460 |
gaggttcacaaatttgcaaccacaac |
26653485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30914854 - 30914947
Alignment:
| Q |
1 |
caatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggt |
94 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||| | ||| |||||||| |||||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
30914854 |
caatagttggtttgtcaaaatatcaagttggtggtgatagatgtcctatggaggttactcttcactcaccctttgacttggtacaaatttgggt |
30914947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 19832133 - 19832197
Alignment:
| Q |
54 |
gttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaagtttaca |
118 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| |
|
|
| T |
19832133 |
gttactcttcaatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttaca |
19832197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 19951332 - 19951564
Alignment:
| Q |
1 |
caatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggg |
100 |
Q |
| |
|
|||| |||| |||||||||||||| ||| ||||| ||||||| | || || ||| |||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
19951332 |
caattgttgatttgtcaaaatatcatgtgggtggtgatagatatcctttagaacttactcttcaatcacccttttacttggttcaaatttggat-ttggg |
19951430 |
T |
 |
| Q |
101 |
a-aggttcaaaagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggtttaggtggcgtatgagtaaagacttgaaaattga |
199 |
Q |
| |
|
| ||||| |||| ||||||| |||||| ||||| || ||||| ||||||||||||| ||||||||||| || | ||| ||||| ||| | |
|
|
| T |
19951431 |
agaggtttaaaaatttacaaccacaac------ccatgccgataaaccatggagacccttttttgtttaggtggcataaggttaagcccttgagaatcca |
19951524 |
T |
 |
| Q |
200 |
agatgttaggttgacattagactcagctattgatgatttt |
239 |
Q |
| |
|
||||||||||| |||||||| ||||||| | ||||||| |
|
|
| T |
19951525 |
cgatgttaggttagcattagacgcagctatgggtgatttt |
19951564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 19858343 - 19858512
Alignment:
| Q |
64 |
aatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttg |
163 |
Q |
| |
|
||||||||||||||||| ||||| ||||||| | || ||||||||||| |||| | |||||| ||||| ||| ||| || ||||| ||||| | |
|
|
| T |
19858343 |
aatcacccttttacttgcttcaagtttgggtttgggaaaggttcaaaaatttagagccacaac------ccatgttgatcaagcatggagaacctttatt |
19858436 |
T |
 |
| Q |
164 |
gtttaggtggcgtatgagtaaagacttgaaaattgaagatgttaggttgacattagactcagctattgatgatttt |
239 |
Q |
| |
|
||||||||||| || | ||| | ||||||| |||| |||||| |||| |||||||||| ||||||||||||||| |
|
|
| T |
19858437 |
gtttaggtggcataaggttaaggccttgaaagttgacaatgttaagttggcattagactcggctattgatgatttt |
19858512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 17114992 - 17115091
Alignment:
| Q |
69 |
cccttttacttggttcaaatttgggtgttgggaaggttcaaaagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggttta |
168 |
Q |
| |
|
|||||||||||||||||||||||| ||| || |||||||||| ||||||| ||| || ||||| ||| |||||| ||||||||||| | ||||| |
|
|
| T |
17114992 |
cccttttacttggttcaaatttggatgtgggagaggttcaaaaatttacaaccac------aatccatgttgatcaaccatggagaccctttattgttta |
17115085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 19943987 - 19944035
Alignment:
| Q |
63 |
caatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
111 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| | || ||||||||||| |
|
|
| T |
19943987 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaa |
19944035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 24839822 - 24839774
Alignment:
| Q |
63 |
caatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
111 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| | || ||||||||||| |
|
|
| T |
24839822 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaa |
24839774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 26653554 - 26653594
Alignment:
| Q |
202 |
atgttaggttgacattagactcagctattgatgattttctt |
242 |
Q |
| |
|
|||| |||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
26653554 |
atgtgaggttggcattagactcagcaattgatgattttctt |
26653594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 9815245 - 9815480
Alignment:
| Q |
1 |
caatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggg |
100 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| ||||||| | || || |||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
9815245 |
caatagttaatttgtcaaaattatctgttggtggtgatagatatcctttagaagttactcttcaatcacccttttacttggttcaaatttgggtgtggga |
9815344 |
T |
 |
| Q |
101 |
aaggttcaaaagtttacaatcacaactaaaaaccatgatgaccaaccacggagaccctttttggtttaggtggcgtatgagtaaagacttgaaaattgaa |
200 |
Q |
| |
|
|||||| ||| |||||| || ||| ||||| ||| ||| |||||||||||||| | ||||||||| | || | | | | |||||||||||| |
|
|
| T |
9815345 |
gaggttccaaaatttacagccagaac------ccatgttgatcaatcacggagaccctttattgtttaggtgacataaggttcaggccttgaaaattgac |
9815438 |
T |
 |
| Q |
201 |
gatgttaggttgacattagactcagctattgatgattttctt |
242 |
Q |
| |
|
|||||| | || |||||||||| ||||| |||||||||||| |
|
|
| T |
9815439 |
aatgttaagctggcattagactcggctatggatgattttctt |
9815480 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 26354829 - 26354724
Alignment:
| Q |
6 |
gttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggt |
105 |
Q |
| |
|
|||| ||||||||||| |||||||||| ||||||| | || || |||| |||||||||||| ||||||||||||||||||||||||| || |||| |
|
|
| T |
26354829 |
gttgatttgtcaaaattatctgttggtggtgatagatatcctttagaagttactcttcaatcaccgttttacttggttcaaatttgggtgtgggagaggt |
26354730 |
T |
 |
| Q |
106 |
tcaaaa |
111 |
Q |
| |
|
|||||| |
|
|
| T |
26354729 |
tcaaaa |
26354724 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 22689530 - 22689473
Alignment:
| Q |
54 |
gttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
111 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||| ||||||||| || |||||||||| |
|
|
| T |
22689530 |
gttaatctgcaatcacccttttacttggttcaagtttgggtgtgggagaggttcaaaa |
22689473 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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