View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1807_high_3 (Length: 250)
Name: NF1807_high_3
Description: NF1807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1807_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 71 - 245
Target Start/End: Original strand, 52471642 - 52471816
Alignment:
| Q |
71 |
gtggaaaaagtgaacttaaattaaactaatccaaaaacaatcatttccctcctcccattttagttcactttcaagccagagtatattattttctttgtct |
170 |
Q |
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| T |
52471642 |
gtggaaaaagtgaacttaaattaaactaatccaaacacaattatttccctcctcccattttagttcactttcaagccagagtatattattttctttgtct |
52471741 |
T |
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| Q |
171 |
ctatactctctattaaataaccaccactcctgtccacagcctagtggttttgtcttcttatcaacctttgctact |
245 |
Q |
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|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
52471742 |
ctatactctctattaaataaccaccactccagtccacagactagtggttttgtcttcttatcaacctttgctact |
52471816 |
T |
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