View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18080_high_2 (Length: 239)
Name: NF18080_high_2
Description: NF18080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18080_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 5501165 - 5501021
Alignment:
| Q |
18 |
catgtagcatttaatttaatttaactaaatagagaagagttccgtctaagaaatgtgcaaacataaatgtcaccaatataagggtggttcactatttact |
117 |
Q |
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| T |
5501165 |
catgtagcatttaatttaatttaactaaatagagaagagtttcgtctaagaaatgtgcaaacataaatgtcaccaatataagggtggttcactatttact |
5501066 |
T |
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| Q |
118 |
atatttatcctaaacaatcaattcctaatggaaggatttgtaacc |
162 |
Q |
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| T |
5501065 |
atatttatcctaaacaatcaattcctaatggaaggatttgtaacc |
5501021 |
T |
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