View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18081_high_20 (Length: 235)
Name: NF18081_high_20
Description: NF18081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18081_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 44828972 - 44829192
Alignment:
| Q |
1 |
aaaaagatcttaactaataaaaagacctttaaaagtagtattatatgcaattgtttatatatgcataacaattgagatcttaactaataatgaagcaatt |
100 |
Q |
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| T |
44828972 |
aaaaagatcttaactaataaaaagacctttaaaagtagtattatatgcaattgtttatatatgcataacaattgagatcttaactaataatgaagcaatt |
44829071 |
T |
|
| Q |
101 |
ttctgtcttacaacgaggttgcataatatgattttgagtgctatatattatggatactctcatgagtgtgtttgatcaaattataacaatattggaaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44829072 |
ttctgtcttacaacgaggttgcataatatgattttgagtgctatatattatggatactctcatgagtgtgtttgatcaaattataacaatattggaaaaa |
44829171 |
T |
|
| Q |
201 |
tatacttttcatgcagtttat |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
44829172 |
tatacttttcatgcagtttat |
44829192 |
T |
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