View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18082_low_12 (Length: 243)
Name: NF18082_low_12
Description: NF18082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18082_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 42428677 - 42428469
Alignment:
| Q |
1 |
ataaacatgagacaatttttcttctaaaattaaagtataacaataaagtgaatgtataagatcatgctgacggaaataattgattgttggtattggagct |
100 |
Q |
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| T |
42428677 |
ataaacatgagacaatttttcttctaaaattaaagtataacaataaagtgaatgtataagattatgctgacggaaataattgattgttggtattggagct |
42428578 |
T |
|
| Q |
101 |
tacaatgtcagtttattttataaagattgtgctttatttcttcggttgagattttctatgatggttaaaggtattataagtgtaagacttgtttttaaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42428577 |
tacaatgtcagtttattttataaagattgtgctttatttcttcggttgagattttctatgatggttaaaggtattataagtgtaagacttgtttttaaat |
42428478 |
T |
|
| Q |
201 |
ttaaagaga |
209 |
Q |
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||| ||||| |
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| T |
42428477 |
ttagagaga |
42428469 |
T |
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