View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18088_low_1 (Length: 391)
Name: NF18088_low_1
Description: NF18088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18088_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 334; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 24 - 373
Target Start/End: Original strand, 45783284 - 45783633
Alignment:
| Q |
24 |
tttctttctcctaaattttcaccgttaattcaatggcctctgagaaaaacaatcaccaccgttcaatcccagacatcaacggcacacaccccacccccaa |
123 |
Q |
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| T |
45783284 |
tttctttctcctaaattttcaccgttaattcaatggcctctgagaaaaacaatcaccaccgttcaatcccagacatcaacggcacacaccccacccccaa |
45783383 |
T |
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| Q |
124 |
aaaacctaaactctcttcttcttccaatttcatcaccgcttcagaaattcaatctgaattcagtcaccacgactccgccgtctctcgcatcaacaacggc |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
45783384 |
aaaacctaaactctcttcttcttccaatttcatcaccgcttcagaaattcaatctgaattcagccaccacgactccgccgtctctcgcatcaacaacggc |
45783483 |
T |
|
| Q |
224 |
agcttcggctcctgtccttcctccatcctttctgctcaacagcaatggcagctcaagtatcttcgtcaacccgatcacttctacttcaaccacctcaaac |
323 |
Q |
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||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45783484 |
agcttcggctcctgtccttcctccatcctctccgctcaacaacaatggcagctcaagtatcttcgtcaacccgatcacttctacttcaaccacctcaaac |
45783583 |
T |
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| Q |
324 |
ccgccatcaacaactcccgctccattatccaaaacctagtcaacgctaaa |
373 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45783584 |
ccgccatcaacaactcccgctccattatccaaaacctagtcaacgctaaa |
45783633 |
T |
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