View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18089_high_17 (Length: 350)
Name: NF18089_high_17
Description: NF18089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18089_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 16 - 341
Target Start/End: Original strand, 23216519 - 23216845
Alignment:
| Q |
16 |
gtaaatacctgaagcttcctagagctgtcgcgtgctgcgactgccatttcatgtgcagttatttcctttatgctggtccacaagtgagcatccttatgga |
115 |
Q |
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| T |
23216519 |
gtaaatacctgaagcttcctagagctgtcgcgtgctgcaactgccatttcatgtgcagttatttcctttatgctggtccacaagtgagcatccttatgga |
23216618 |
T |
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| Q |
116 |
atacagtaccgattctttctccttgaagcactcgcatgatgttgtcattaggatagccacttgaaaggaggttgaagtgaaaaataatgtcagaaaaatg |
215 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
23216619 |
atacagtaccaattctttctccttgaagcactcgcatgatgttgtcattaggatagccacttgaaaggaggttgaagtgaaaaacaatgtcagaaaaatg |
23216718 |
T |
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| Q |
216 |
aaaattttaaacacatgattgtactcgggtagtaagggctttttcaaactcaaaattgcatatcagaaaattaacg-aaaaaatgaacatgacagaaatg |
314 |
Q |
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||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
23216719 |
aaaattttaaacatatggttgtactcgggtagtaagggctttttcaaactcaaaattgcatatcagaaaattaacgaaaaaaatgaacatgacagaaatg |
23216818 |
T |
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| Q |
315 |
atcatatattctcatcacttgaaccta |
341 |
Q |
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||||||||||||||||||||||||||| |
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| T |
23216819 |
atcatatattctcatcacttgaaccta |
23216845 |
T |
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