View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18089_high_26 (Length: 294)
Name: NF18089_high_26
Description: NF18089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18089_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 47119479 - 47119751
Alignment:
| Q |
1 |
ttttctatatctttcttatttatttatttattttgaaaatgtcaattagtatattagatgaacgaatagtgcatgcaaacttctttcatatcaaacattt |
100 |
Q |
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| T |
47119479 |
ttttctatatctttcttatttatttattt----tgaaaatgtcaattagtatattagatgaacgaatagttcatgcaaacttctttcatatcaaacattt |
47119574 |
T |
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| Q |
101 |
ttctttttaataatatgtatgcatgccataaaactacgag--ataacattgaggttcaaagtttacctctaaacacgtgtaatgttatgcattttttgtg |
198 |
Q |
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| T |
47119575 |
ttgtttttaataatatgtatgcatgccataaaactacgagctataacattgaggttcaaagtttacctctaaacacgtgtaatgttatgcattttttgtg |
47119674 |
T |
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| Q |
199 |
aaaatgtagattgtcacttgatcttgggagtatgaaagtaagagaaaatttgaatccgcaacaacgttctaccactg |
275 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47119675 |
aacatgtagattgtcacttgatcttgggagtatgaaagtaagagaaaatttgaatccgcaacaacgttctaccactg |
47119751 |
T |
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