View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18089_low_6 (Length: 557)
Name: NF18089_low_6
Description: NF18089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18089_low_6 |
 | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0736 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 506; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 11 - 540
Target Start/End: Complemental strand, 54812754 - 54812225
Alignment:
| Q |
11 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggaca |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
54812754 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagctctttcatagagggcctaagttgacggaca |
54812655 |
T |
|
| Q |
111 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54812654 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacggcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
54812555 |
T |
|
| Q |
211 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtata |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54812554 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattgaagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtata |
54812455 |
T |
|
| Q |
311 |
gagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatg |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54812454 |
gagatggcttggagggagcattttgatcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatg |
54812355 |
T |
|
| Q |
411 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
510 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54812354 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattagcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
54812255 |
T |
|
| Q |
511 |
tgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
54812254 |
tgctaattttagcatttctgtgaatcattt |
54812225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 11 - 540
Target Start/End: Original strand, 46428249 - 46428778
Alignment:
| Q |
11 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggaca |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
46428249 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacagaca |
46428348 |
T |
|
| Q |
111 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46428349 |
ctatctacataggatggaaacgacctcaggaaggttgaatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
46428448 |
T |
|
| Q |
211 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtata |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
46428449 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgttgagatgtgggggttgtatttgggtata |
46428548 |
T |
|
| Q |
311 |
gagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatg |
410 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
46428549 |
gagatggcttgcagggagcattttgatcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacaagttcaagtttaatgggaata |
46428648 |
T |
|
| Q |
411 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
46428649 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcatgaaggaaatagaagtgccgattggct |
46428748 |
T |
|
| Q |
511 |
tgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
||||||||||||||||| |||||||||||| |
|
|
| T |
46428749 |
tgctaattttagcatttatgtgaatcattt |
46428778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 490; E-Value: 0
Query Start/End: Original strand, 11 - 540
Target Start/End: Original strand, 42794179 - 42794708
Alignment:
| Q |
11 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggaca |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
42794179 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacgcaca |
42794278 |
T |
|
| Q |
111 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42794279 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
42794378 |
T |
|
| Q |
211 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtata |
310 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42794379 |
ttttcgcgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgtcttacatgctgagatgtgggggttgtatttgggtata |
42794478 |
T |
|
| Q |
311 |
gagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatg |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
42794479 |
gagatggcttggagggagcattttgatcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctaacaagttcaagtttaatgggaata |
42794578 |
T |
|
| Q |
411 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42794579 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
42794678 |
T |
|
| Q |
511 |
tgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
|||||||||||| || | |||||||||||| |
|
|
| T |
42794679 |
tgctaattttagaatatatgtgaatcattt |
42794708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 12 - 540
Target Start/End: Complemental strand, 43912762 - 43912229
Alignment:
| Q |
12 |
aaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggac-- |
109 |
Q |
| |
|
|||||| ||| |||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||| |
|
|
| T |
43912762 |
aaaggctgaacaatctaaatatattaatccaaagattcgttagggatattgaagactacaacttggagtaccttcatagagggcctaaggtgaaggaagt |
43912663 |
T |
|
| Q |
110 |
---actatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtg |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
43912662 |
aatactatctacataggatggaaacgacctcagaaaggttggatcaagctcaacagtgacgatgcctgcaaggatatgggtcatattttcggttgtggtg |
43912563 |
T |
|
| Q |
207 |
gtatttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttggg |
306 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||| |
|
|
| T |
43912562 |
atatttttcgtgatgtagatgataaatggattaaaggctacgttaagaagatttgagcttgtgataccttacatgatgagatgtgagggttgtatttggg |
43912463 |
T |
|
| Q |
307 |
tatagagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatggg |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
43912462 |
tatagagatggcttggagggagcattttgatcatcttatagttgaaagtgactcaaagatattgatcaacatgatttctgagaagttcaagtttaatggg |
43912363 |
T |
|
| Q |
407 |
aatgtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgatt |
506 |
Q |
| |
|
||| | ||||||||| ||||||||||||||||||| ||| |||||||||||| |||||||||||||||| ||||| |||| ||||| ||||| ||| |
|
|
| T |
43912362 |
aatatctctattttagctcatcgtatcaggaagctgttgaaaatggattggcaagtgcaaatcaaccatatctggcgcgaagaaaatataagtgtatatt |
43912263 |
T |
|
| Q |
507 |
ggcttgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |
|
|
| T |
43912262 |
accttgctaattttaacatttctgtgaatcattt |
43912229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 113 - 529
Target Start/End: Original strand, 54346530 - 54346946
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || |||| ||||||||||||||||| || || || ||||| |||||||||||||| |||| | || ||||| || ||| |
|
|
| T |
54346530 |
atctatataggttggaagcggcctcgagaaggttggatcaagcttaatagtgatggtgcttgcaaggatatgggggttattgctggatgtggcggccttt |
54346629 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
|||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | || |
|
|
| T |
54346630 |
ttcgtgattcagacggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtggggactatatttgggtttgga |
54346729 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||| ||||| ||| | |
|
|
| T |
54346730 |
catggcttggagggaacattactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatggaaatatt |
54346829 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
||| |||||||| | |||||| |||||||||||| ||| |||| |||| ||| ||| |||||||||||||||||||||||| ||||| |||||||| | |
|
|
| T |
54346830 |
cctgttttagtttaccgtatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgctgattggctcg |
54346929 |
T |
|
| Q |
513 |
ctaattttagcatttct |
529 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
54346930 |
ctaatttaagcatttct |
54346946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 141 - 529
Target Start/End: Complemental strand, 27156542 - 27156155
Alignment:
| Q |
141 |
aaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtgatgcagatggtaaatggattaa |
240 |
Q |
| |
|
|||||||||||||||| || || || ||||| |||||||||||||| |||| | || ||||| || |||||| |||| |||| |||| |||||| || |
|
|
| T |
27156542 |
aaggttggatcaagcttaatagtgatggtgcttgcaaggatatgggggttatt-ctggatgtggcggcctttttcatgattcagacggtagatggatcaa |
27156444 |
T |
|
| Q |
241 |
aggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggagggagcattttgatcat |
340 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||| | || || ||||||||||| |||| |||| |
|
|
| T |
27156443 |
aggctacactaagaagattagagcttgtgatgccttacatgctgagatgtgaggactatatttgggtttggacatagcttggagggaacattactctcat |
27156344 |
T |
|
| Q |
341 |
cttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagc |
440 |
Q |
| |
|
||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||||||||||||| | ||| |||||||| | || ||| |||||| |
|
|
| T |
27156343 |
cttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagtttaatgggaatattcctgttttagtttaccggatccggaagc |
27156244 |
T |
|
| Q |
441 |
tgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
|||||| ||| |||| |||| ||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||| |
|
|
| T |
27156243 |
tgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaataggagtgctgattggctcgctaatttcagcatttct |
27156155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 34265164 - 34265262
Alignment:
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatag |
311 |
Q |
| |
|
|||||||| |||||||||||||||||||| | |||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
34265164 |
ttcgtgattcagatggtaaatggattaaatgttacactaaaaagattgaagcttgtgatgtcttacatgctgagatgtgggagttgtatttgtgtatag |
34265262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 478
Target Start/End: Complemental strand, 51841511 - 51841234
Alignment:
| Q |
200 |
tgtggtggtatttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgt |
299 |
Q |
| |
|
||||| ||| ||||| ||||| |||||| || ||| |||||||| |||||||| || ||| || || |||| |||| | | ||||||||| | ||||| |
|
|
| T |
51841511 |
tgtgggggtcttttttgtgattcagatgatagatgcattaaaggttacactaaaaaatttgttgcgtgcgatgacttatacgttgagatgtgagagttgt |
51841412 |
T |
|
| Q |
300 |
atttgggtatagagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtt |
399 |
Q |
| |
|
|||| || | || |||||||||| ||||||||| ||||||||| ||||| ||||||| ||| ||||||||||||| | ||||||| | ||||| || |
|
|
| T |
51841411 |
atttaggattggatatggcttggaaagagcatttttctcatcttatagtggagagtgactcaaagttattgatcgacat-acttctgacaatttcaattt |
51841313 |
T |
|
| Q |
400 |
taatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatact |
478 |
Q |
| |
|
|| |||| | | |||||||||||| | |||||| | ||| | |||| ||| || |||||||||||||| |||||| |
|
|
| T |
51841312 |
caaagggactatccctattttagttgagcgtatccgaaaggttctgaagatgaggtgacatgtgcaaatcaatcatact |
51841234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 37503148 - 37503204
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
37503148 |
ccatacttgacgtgaaggcaacagaagtgcagattgacttgctaattttagcatttc |
37503204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 25905871 - 25905926
Alignment:
| Q |
473 |
catacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
||||||||| ||||||| || |||||||| ||||| ||||||||||| |||||||| |
|
|
| T |
25905871 |
catacttggtgtgaaggcaacagaagtgcagattgacttgctaatttcagcatttc |
25905926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 529
Target Start/End: Original strand, 43813088 - 43813158
Alignment:
| Q |
459 |
atgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
|||| ||| ||||||||| |||||||||||||||| | ||||| ||||| || ||||| || ||||||||| |
|
|
| T |
43813088 |
atgttcaactcaaccataattggcgtgaaggaaattggagtgctgattgactcgctaacttaagcatttct |
43813158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 483; Significance: 0; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 11 - 540
Target Start/End: Complemental strand, 22065708 - 22065178
Alignment:
| Q |
11 |
caaaggccgaataatccaaa-tatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggac |
109 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
22065708 |
caaaggccgaataatccaaaatatactaatccaaacattcgttagagatattgaagactacaacttggagctctttcatagagggcctaaggtgacgaac |
22065609 |
T |
|
| Q |
110 |
actatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggta |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22065608 |
actatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagtgacggtgcctgcaaggatatgggtcatattttcggttgtggtggta |
22065509 |
T |
|
| Q |
210 |
tttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22065508 |
tttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatttgggggttgtatttgggtat |
22065409 |
T |
|
| Q |
310 |
agagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaat |
409 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22065408 |
agaaatggcttggagggagcattttgatcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacaagttcaagtttaatgggaat |
22065309 |
T |
|
| Q |
410 |
gtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggc |
509 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22065308 |
gtgcctattttagttcatcgtatcaggaggctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggc |
22065209 |
T |
|
| Q |
510 |
ttgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |
|
|
| T |
22065208 |
ttgctaattttagcatatctgtgaatcattt |
22065178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 113 - 529
Target Start/End: Original strand, 23949493 - 23949909
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || |||| ||||||||||||||||| || || || ||||| |||||||||||||| |||| | || ||||| || ||| |
|
|
| T |
23949493 |
atctatataggttggaagcggcctcgagaaggttggatcaagcttaatagtgatggtgcttgcaaggatatgggggttattgctggatgtggcggccttt |
23949592 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
|||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | || |
|
|
| T |
23949593 |
ttcgtgattcagacggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtggggactatatttgggtttgga |
23949692 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||| ||||||||| | |
|
|
| T |
23949693 |
catggcttggagggaacattaatctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatatt |
23949792 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
||| |||||||| | |||||| |||||||||||| ||| || | |||| ||| |||||||||||||||||||||||||||| ||||| |||||||| | |
|
|
| T |
23949793 |
cctgttttagtttaccgtatccggaagctgctgaagatgagttagaatgttcaactcaaccatacttggcgtgaaggaaataggagtgctgattggctcg |
23949892 |
T |
|
| Q |
513 |
ctaattttagcatttct |
529 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
23949893 |
ctaatttaagcatttct |
23949909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 113 - 529
Target Start/End: Original strand, 5308437 - 5308853
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || |||| ||||||||||||||||| || || || ||||| |||||||||||||| |||| | || ||||| | ||| |
|
|
| T |
5308437 |
atctatataggttggaagcggcctcgagaaggttggatcaagcttaatagtgatggtgcttgcaaggatatgggggttattgctggatgtggctgccttt |
5308536 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
|||||||| || | |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | || |
|
|
| T |
5308537 |
ttcgtgattcaaacggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtggggactatatttgggtttgga |
5308636 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||| ||||| ||| | |
|
|
| T |
5308637 |
catggcttggagggaacattactctcatcttatagtggaaagtgaatcaaagattttgatcgacatgatttctgataatttcaagttcaatggaaatatt |
5308736 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
||| |||||||| | |||||| |||| ||||||| ||| |||| |||| ||| |||||||||||||||||||||||||||| ||||| |||||||| | |
|
|
| T |
5308737 |
cctgttttagtttaccgtatccggaatctgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaataggagtgctgattggctcg |
5308836 |
T |
|
| Q |
513 |
ctaattttagcatttct |
529 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
5308837 |
ctaatttaagcatttct |
5308853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 113 - 529
Target Start/End: Complemental strand, 23085315 - 23084898
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcat-atttccggttgtggtggtatt |
211 |
Q |
| |
|
||||| ||||| ||||| || ||||| ||||||||||||||||| || || || ||||| |||||||||||||| | ||| | || || || || || |
|
|
| T |
23085315 |
atctatataggttggaagcggcctcaagaaggttggatcaagcttaatagtgatggtgcttgcaaggatatggggggttattgctggatgaggcggcctt |
23085216 |
T |
|
| Q |
212 |
tttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatag |
311 |
Q |
| |
|
||||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | | |
|
|
| T |
23085215 |
tttcgtgattcagacggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtggggtctatatttgggtctgg |
23085116 |
T |
|
| Q |
312 |
agatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgt |
411 |
Q |
| |
|
| |||||||||||||| |||| ||||||||| ||||||||||| || ||||| |||||||||||||||| ||| | |||||||| ||||||||| | |
|
|
| T |
23085115 |
acatggcttggagggaacattgctctcatcttatagtggaaagtgatttaaagattttgatcgacatgatttttgataatttcaagttcaatgggaatat |
23085016 |
T |
|
| Q |
412 |
gcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggctt |
511 |
Q |
| |
|
| | |||||||| | || ||| |||||||||||| ||| |||| |||| ||| ||||||||| |||||||||||||||||| ||||| |||||||| |
|
|
| T |
23085015 |
tcatgttttagtttaccggatccggaagctgctgaagatgagttggaatgttcaactcaaccatatttggcgtgaaggaaataggagtgctgattggctc |
23084916 |
T |
|
| Q |
512 |
gctaattttagcatttct |
529 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
23084915 |
gctaatttaagcatttct |
23084898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 113 - 529
Target Start/End: Complemental strand, 50952972 - 50952555
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || |||| ||||||||||||||||| || || || ||||| |||||||||||||| |||| | || ||||| || ||| |
|
|
| T |
50952972 |
atctatataggttggaagcggcctcgagaaggttggatcaagcttaatagtgatggtgcttgcaaggatatgggggttattgctggatgtggcggccttt |
50952873 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggct-acactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatag |
311 |
Q |
| |
|
|||||||| |||| |||| || ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | | |
|
|
| T |
50952872 |
ttcgtgattcagacggtagatagatcaaaggcttacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggctatatttgggtttgg |
50952773 |
T |
|
| Q |
312 |
agatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgt |
411 |
Q |
| |
|
| |||||||||||||| |||| | ||||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||| ||||||||| | |
|
|
| T |
50952772 |
acatggcttggagggaacattactctaatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatat |
50952673 |
T |
|
| Q |
412 |
gcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggctt |
511 |
Q |
| |
|
| | |||||||| | || ||| |||||||||||| ||| |||| |||| ||| ||||||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
50952672 |
tcatgttttagtttaccggatccggaagctgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaagaaaataggagtgctgattggctc |
50952573 |
T |
|
| Q |
512 |
gctaattttagcatttct |
529 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
50952572 |
gctaatataagcatttct |
50952555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 228 - 540
Target Start/End: Original strand, 2601096 - 2601404
Alignment:
| Q |
228 |
gtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggaggga |
327 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| ||||||| ||||||||| ||| ||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
2601096 |
gtaaatgaattaaaggctacactaagtagattggagtttgtgataccttacatg---agacgtgggagttgtatttgggtatagatatggcttggaggga |
2601192 |
T |
|
| Q |
328 |
gcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcat |
427 |
Q |
| |
|
|||||||| || |||||| ||||||||||| | |||||||| |||||||||| ||||||| | ||||||||||||| |||| | ||||||||||||| |
|
|
| T |
2601193 |
gcattttggtcgtcttatagtggaaagtgattctaagatatt-atcgacatgaattctgacaaattcaagtttaatgagaatataactattttagttcac |
2601291 |
T |
|
| Q |
428 |
cgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcattt |
527 |
Q |
| |
|
||||| ||||||||||| ||| ||||| ||||||||||||| ||| |||||| || ||||| |||||| ||||||||||||| | |||||||| |
|
|
| T |
2601292 |
tatatcatgaagctgctgaacatgaattgggatgtgcaaatcaatcattcttggcacaaacaaaatataagtgcttattggcttgctaactatagcattt |
2601391 |
T |
|
| Q |
528 |
ctgtgaatcattt |
540 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
2601392 |
ttgtggatcattt |
2601404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 368 - 529
Target Start/End: Original strand, 42677241 - 42677402
Alignment:
| Q |
368 |
ttgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaa |
467 |
Q |
| |
|
|||||||||||||||||||| | |||||||| ||||| ||| | ||| |||||||| | |||||| |||||||||||| ||| |||| |||| ||| |
|
|
| T |
42677241 |
ttgatcgacatgatttctgataatttcaagttcaatggaaatattcctgttttagtttaccgtatccggaagctgctgaagatgagttggaatgttcaac |
42677340 |
T |
|
| Q |
468 |
tcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||| |
|
|
| T |
42677341 |
tcaaccatacttggcgtgaaggaaataggagtgctgattggctcgctaatttaagcatttct |
42677402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 455 - 529
Target Start/End: Complemental strand, 8059923 - 8059849
Alignment:
| Q |
455 |
tggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
||||| |||||| |||||||||| ||||| || |||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
8059923 |
tggcaggtgcaattcaaccatacctggcgcgagggaaatagaagtgctgattggcttgctaattttagcttttct |
8059849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 519
Target Start/End: Complemental strand, 34554052 - 34553870
Alignment:
| Q |
337 |
tcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcagg |
436 |
Q |
| |
|
||||||||| ||||||||||| | ||||| || ||||||||||||||||| | || | ||| |||||||| | ||||||||||||| | ||| | |
|
|
| T |
34554052 |
tcatcttatagtggaaagtgattcaaagatttttatcgacatgatttctgataattttgaatttgatgggaatatttctattttagttcactggatccag |
34553953 |
T |
|
| Q |
437 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattt |
519 |
Q |
| |
|
||| |||||| ||| || | |||| ||| |||||||||||||| ||||||||||||||||||| ||||| || |||||||| |
|
|
| T |
34553952 |
aagatgctgaagatgagttagaatgttcaactcaaccatacttggtgtgaaggaaatagaagtgctgattgactcgctaattt |
34553870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 16855004 - 16855060
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
16855004 |
ccatacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
16855060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 6294076 - 6294131
Alignment:
| Q |
473 |
catacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
6294076 |
catacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
6294131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 39476120 - 39476175
Alignment:
| Q |
473 |
catacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
||||||||||||||||| || | |||||| ||||| ||||||||||| |||||||| |
|
|
| T |
39476120 |
catacttggcgtgaaggcaacaaaagtgcagattgtcttgctaatttcagcatttc |
39476175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 28706051 - 28706107
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||||||||| || | ||||| |||||||||||||||| |||||||| |
|
|
| T |
28706051 |
ccatacttggcgtgaaggcaacaaaagtgtatattggcttgctaatttcagcatttc |
28706107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 481; Significance: 0; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 36 - 540
Target Start/End: Original strand, 44145423 - 44145926
Alignment:
| Q |
36 |
taatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggacactatctacataggatggaaacgacc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44145423 |
taatccaaacattcgttagagatattgaagactacaacttggagctctttcatagagggcctaaggtgacggacactatctacataggatggaaacgacc |
44145522 |
T |
|
| Q |
136 |
tcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtgatgcagatggtaaatgg |
235 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44145523 |
tcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtgatgcagatggtaaatgg |
44145622 |
T |
|
| Q |
236 |
attaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggagggagcattttg |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44145623 |
attaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggagggagcattttg |
44145722 |
T |
|
| Q |
336 |
atcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcag |
435 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44145723 |
atcatctta-tgtggaaagtgactcgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcag |
44145821 |
T |
|
| Q |
436 |
gaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaat |
535 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
44145822 |
gaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgctgattgacttgctaattttagcatttctgtgaat |
44145921 |
T |
|
| Q |
536 |
cattt |
540 |
Q |
| |
|
||||| |
|
|
| T |
44145922 |
cattt |
44145926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 233 - 540
Target Start/End: Complemental strand, 38560902 - 38560595
Alignment:
| Q |
233 |
tggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggagggagcatt |
332 |
Q |
| |
|
|||||||||||||||||| |||| || |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38560902 |
tggattaaaggctacactgagaatatcggagtttgtgatgccttacatgttgagatgtgggggttgtatttgggtatagagatggtttggagggagcatt |
38560803 |
T |
|
| Q |
333 |
ttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtat |
432 |
Q |
| |
|
||||||||||||| |||||||||| || |||||||||||||||| |||||||||| |||||| |||||||||||| | |||||||||||||||||||| |
|
|
| T |
38560802 |
ttgatcatcttatagtggaaagtggctcgaagatattgatcgacgtgatttctgataggttcaaatttaatgggaatatccctattttagttcatcgtat |
38560703 |
T |
|
| Q |
433 |
caggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtg |
532 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38560702 |
caagaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcacgaaggaaatagaagtgccgattggcttgctaattttagcatttttgtg |
38560603 |
T |
|
| Q |
533 |
aatcattt |
540 |
Q |
| |
|
|||||||| |
|
|
| T |
38560602 |
aatcattt |
38560595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 113 - 529
Target Start/End: Original strand, 1635793 - 1636209
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || ||||| ||||||||||||||||| || || || ||||| ||||||||||| || |||| | || ||||| || ||| |
|
|
| T |
1635793 |
atctatataggttggaagcggcctcaagaaggttggatcaagcttaatagtgatggtgcttgcaaggatataggggttattgctggatgtggcggccttt |
1635892 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
|||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | || |
|
|
| T |
1635893 |
ttcgtgattcagacggtaaatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtggggactatatttgggtttgga |
1635992 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
||| |||||||||| ||| ||||||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||| ||||||||| | |
|
|
| T |
1635993 |
tatgacttggagggaatattactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatatt |
1636092 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
||| |||||||| | |||||| |||||||||||| ||| |||| |||| ||| ||| |||||||| ||||||||||||||| ||||| |||||||| | |
|
|
| T |
1636093 |
cctgttttagtttaccgtatccggaagctgctgaagatgagttggaatgttcaactcacccatacttagcgtgaaggaaataggagtgctgattggctcg |
1636192 |
T |
|
| Q |
513 |
ctaattttagcatttct |
529 |
Q |
| |
|
||||||| | ||||||| |
|
|
| T |
1636193 |
ctaatttaatcatttct |
1636209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 113 - 529
Target Start/End: Complemental strand, 26617128 - 26616714
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || |||| ||||||||||||||||| || || || ||||| |||||||||||| | |||| | ||||| || ||| |
|
|
| T |
26617128 |
atctatataggttggaagcggcctcgagaaggttggatcaagcttaatagtgatggtgcttgcaaggatatgagggttattgcttcatgtggcggccttt |
26617029 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
|||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | ||||||||| | | |
|
|
| T |
26617028 |
ttcgtgattcagacggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatttgggtgctatatttgggtttgta |
26616929 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||| ||||||||| | |
|
|
| T |
26616928 |
catggcttggagggaacattactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatatt |
26616829 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
|| | |||||| | || ||| |||||||||||| ||| |||| |||| ||| ||||||||||||||||||||||||||| ||| | |||||||| |
|
|
| T |
26616828 |
cc--tgttagtttaccggatctggaagctgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaatatgagtactgattggctca |
26616731 |
T |
|
| Q |
513 |
ctaattttagcatttct |
529 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
26616730 |
ctaatttaagcatttct |
26616714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 55 - 529
Target Start/End: Complemental strand, 456817 - 456348
Alignment:
| Q |
55 |
agatattgaagactacaacttggagcactttcatagagggcctaaggtgacggacactatctacataggatggaaacgacctcaggaaggttggatcaag |
154 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||| || || ||| ||| || | ||||| ||||| ||||| || |||| || |||||||||| | |
|
|
| T |
456817 |
agatattgaagactgtaacttggagcatattcatattggtccaaagttgaaggcaatcatctatataggttggaagcggcctcgagagggttggatcagg |
456718 |
T |
|
| Q |
155 |
ctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtgatgcagatggtaaatggattaaaggctacactaaga |
254 |
Q |
| |
|
|| || || || ||||| |||||||||||||| |||| | || ||||| || ||||||||||| |||| |||| |||||| |||||||||||||||| |
|
|
| T |
456717 |
cttaatagtgatggtgcttgcaaggatatgggggttattgctggatgtggcggcctttttcgtgattcagacggtagatggatcaaaggctacactaaga |
456618 |
T |
|
| Q |
255 |
agattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggagggagcattttgatcatcttattgtggaaag |
354 |
Q |
| |
|
||||||||| |||||||| |||| ||||||||||||||||| | ||||| | || |||||||||| ||| |||| ||||||||| |||||||| |
|
|
| T |
456617 |
agattggagtttgtgatgtcttatatgctgagatgtgggggctatattt-----tggacatggcttggaaggaacattactctcatcttatagtggaaag |
456523 |
T |
|
| Q |
355 |
tgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggat |
454 |
Q |
| |
|
||| | |||| ||||| || ||||||||||| | |||||||| ||||||||| | ||| ||||| |||| || ||| ||||||| |||| ||| | |
|
|
| T |
456522 |
tgattcaaagagtttgattgatatgatttctgataatttcaagttcaatgggaatattcctgttttatttcaccggatccggaagctactgaagatgagt |
456423 |
T |
|
| Q |
455 |
tggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
||| |||| ||| ||||||||||||| || ||||||||||| ||||| ||||||| |||||||| | ||||||| |
|
|
| T |
456422 |
tggaatgttcaactcaaccatacttgacgcgaaggaaataggagtgctaattggctcgctaatttaaacatttct |
456348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 38560962 - 38560904
Alignment:
| Q |
123 |
gatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggat |
181 |
Q |
| |
|
||||| ||| ||||||||||||||||||||| |||| ||| |||||||||||||||||| |
|
|
| T |
38560962 |
gatggtaacaacctcaggaaggttggatcaaactcagcagtgacggtgcctgcaaggat |
38560904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 522
Target Start/End: Original strand, 1362962 - 1363022
Alignment:
| Q |
462 |
tgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttag |
522 |
Q |
| |
|
||||| |||||||||| |||| || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
1362962 |
tgcaattcaaccatacctggcaggagggaaatagaagtgctgattggcttgctaattttag |
1363022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 42000334 - 42000390
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||||||||| || | |||||| ||||||||||||||||| |||||||| |
|
|
| T |
42000334 |
ccatacttggcgtgaaggcaacaaaagtgcagattggcttgctaatttcagcatttc |
42000390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 45093500 - 45093556
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||||||||| || |||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
45093500 |
ccatacttggcgtgaaggcaacagaagtgcagattggcttgcaaatttcagcatttc |
45093556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 472 - 518
Target Start/End: Original strand, 35808261 - 35808307
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaatt |
518 |
Q |
| |
|
|||||||||||||||||| || |||||||| |||||||||||||||| |
|
|
| T |
35808261 |
ccatacttggcgtgaaggcaacagaagtgcagattggcttgctaatt |
35808307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 526
Target Start/End: Complemental strand, 9031655 - 9031587
Alignment:
| Q |
458 |
catgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatt |
526 |
Q |
| |
|
|||||| |||| |||||||||| ||||||||||||||||||| ||||||||||| || |||||||| |
|
|
| T |
9031655 |
catgtgaaaattaaccatacttaacgtgaaggaaatagaagtgttgattggcttgcaaacattagcatt |
9031587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 40536626 - 40536559
Alignment:
| Q |
257 |
attggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggag |
324 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||| | |||||||| |||| ||||||||||| |
|
|
| T |
40536626 |
attggagcttgtgatgctctgcatgctgagatgtggggtctttatttgggactagatatggcttggag |
40536559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 33373257 - 33373313
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||| ||||| || | |||||| |||||| |||||||||| |||||||| |
|
|
| T |
33373257 |
ccatacttggcgggaaggcaacaaaagtgcagattggattgctaatttcagcatttc |
33373313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 478; Significance: 0; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 11 - 540
Target Start/End: Complemental strand, 47598096 - 47597567
Alignment:
| Q |
11 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggaca |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
47598096 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacagaca |
47597997 |
T |
|
| Q |
111 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
210 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47597996 |
ttatctacataggatggaaacgacctcaagaaggttggatcaaactcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
47597897 |
T |
|
| Q |
211 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtata |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47597896 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtata |
47597797 |
T |
|
| Q |
311 |
gagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatg |
410 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
47597796 |
aagatggcttgaagggagcattttgatcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacaagttcaagtttaatgggaata |
47597697 |
T |
|
| Q |
411 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
510 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
47597696 |
tgcctattttagttcattgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcataaaggaaatagaagtgccgattggct |
47597597 |
T |
|
| Q |
511 |
tgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
||||||||||||||||| |||||||||||| |
|
|
| T |
47597596 |
tgctaattttagcatttttgtgaatcattt |
47597567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 119 - 500
Target Start/End: Complemental strand, 43271189 - 43270807
Alignment:
| Q |
119 |
ataggatggaaacgacctcaggaaggttggatcaa-gctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgt |
217 |
Q |
| |
|
|||||||||| ||||| || |||||||||||||| ||||| || | | | ||| |||||||||| ||||||||||| |||||||| || |||||||| |
|
|
| T |
43271189 |
ataggatggacacgacaacatgaaggttggatcaaagctcatcaacaatgatgcgtgcaaggataggggtcatattttttgttgtggtagtctttttcgt |
43271090 |
T |
|
| Q |
218 |
gatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatgg |
317 |
Q |
| |
|
|| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | |||||| |||| |
|
|
| T |
43271089 |
aattcagatggtaaattgattaaaggctacactaagaagatgtgagcttgtgatgccttacatgctgagatgtatgggttgtatttagatatagacatgg |
43270990 |
T |
|
| Q |
318 |
cttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctat |
417 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||||||||| |||| | |||||| ||||||| ||| | ||||| |
|
|
| T |
43270989 |
cttggagggagcatttagatcatcttatagttaaaagtgactctaagatattgatcgacatgatttttgacaatttcaagcttaatggaaatatccctat |
43270890 |
T |
|
| Q |
418 |
tttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtg |
500 |
Q |
| |
|
||||||||||||||||| |||||| | | ||| ||| |||| ||||||||||||||| ||| ||||||| ||||| ||||| |
|
|
| T |
43270889 |
tttagttcatcgtatcaagaagctattaaaaattaattagcatttgcaaatcaaccatatttgacgtgaagaaaatataagtg |
43270807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 112 - 527
Target Start/End: Complemental strand, 34390210 - 34389795
Alignment:
| Q |
112 |
tatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatt |
211 |
Q |
| |
|
|||||| ||||| ||||| || |||| ||||||||||||||||| || || || ||||| |||||||||||||| |||| | || ||||| || || |
|
|
| T |
34390210 |
tatctatataggttggaagcggcctcgagaaggttggatcaagcttaatagtgatggtgcttgcaaggatatgggggttattgctggatgtggcggcctt |
34390111 |
T |
|
| Q |
212 |
tttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatag |
311 |
Q |
| |
|
||||||||| || | |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| || | | |
|
|
| T |
34390110 |
tttcgtgattcaaacggtagatggatcaaaggctatactaagaagattggagcttgtgatgccttacatgctgagatgtgggggctatatttgagtttgg |
34390011 |
T |
|
| Q |
312 |
agatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgt |
411 |
Q |
| |
|
| |||||||||||||| |||| ||||||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||| ||||||||| | |
|
|
| T |
34390010 |
acatggcttggagggaacattactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatat |
34389911 |
T |
|
| Q |
412 |
gcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggctt |
511 |
Q |
| |
|
| | |||||||| | || ||| | |||||||||| ||| |||| |||| ||| |||||||||||| ||||||||||||||| ||||| |||||||| |
|
|
| T |
34389910 |
tcttgttttagtttaccggatccgaaagctgctgaagatgatttggaatgttcaactcaaccatacttagcgtgaaggaaataggagtgctgattggctc |
34389811 |
T |
|
| Q |
512 |
gctaattttagcattt |
527 |
Q |
| |
|
|||||||| ||||||| |
|
|
| T |
34389810 |
gctaatttaagcattt |
34389795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 114 - 527
Target Start/End: Complemental strand, 36894820 - 36894406
Alignment:
| Q |
114 |
tctacataggatggaaacgacctcaggaaggttggatcaagctc-aacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
|||| ||||| ||||| || |||| ||||||||||||||||| || | || ||||| |||||||||||||| |||| | || ||||| || ||| |
|
|
| T |
36894820 |
tctatataggttggaagcggcctcgagaaggttggatcaagctttaataatgatggtgcttgcaaggatatgggggttattgctggatgtggcggctttt |
36894721 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
||| |||| |||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | || |
|
|
| T |
36894720 |
ttcatgattcagacggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggctatatttgggtttgga |
36894621 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||||||||| | ||||| |||||||||||||||||| | | |||||||| |||| |||| | |
|
|
| T |
36894620 |
catggcttggagggaacattactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctaataatttcaagttcaatgtgaatatt |
36894521 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
||| |||||||| | || ||| ||||| |||||| ||| |||| |||| ||| |||||||||||||||||||||||||||| |||| |||||||| | |
|
|
| T |
36894520 |
cctgttttagtttaccggatccggaagttgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaataggagtgttgattggctcg |
36894421 |
T |
|
| Q |
513 |
ctaattttagcattt |
527 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
36894420 |
ctaatttaagcattt |
36894406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 438 - 540
Target Start/End: Original strand, 4228291 - 4228393
Alignment:
| Q |
438 |
agctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaatca |
537 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4228291 |
agctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaatta |
4228390 |
T |
|
| Q |
538 |
ttt |
540 |
Q |
| |
|
||| |
|
|
| T |
4228391 |
ttt |
4228393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 44307583 - 44307639
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||||||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
44307583 |
ccatacttggcgtgaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
44307639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 1217218 - 1217274
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
1217218 |
ccatacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
1217274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 1369493 - 1369549
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
1369493 |
ccatacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
1369549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 522
Target Start/End: Complemental strand, 11896116 - 11896048
Alignment:
| Q |
454 |
ttggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttag |
522 |
Q |
| |
|
||||||||| || ||||||||||| |||||||||||||||||| || |||||||| ||||||||||| |
|
|
| T |
11896116 |
ttggcatgttcatatcaaccatacatggcgtgaaggaaatagatcagcagattggctagctaattttag |
11896048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Complemental strand, 28945416 - 28945360
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
28945416 |
ccatacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
28945360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 23409860 - 23409929
Alignment:
| Q |
235 |
gattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttggg |
306 |
Q |
| |
|
||||||| |||||||||||||||| | | ||||||||||||||| |||||| |||| ||||||||||||| |
|
|
| T |
23409860 |
gattaaatgctacactaagaagatatgtg--tgtgatgccttacatcctgagacgtggtggttgtatttggg |
23409929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 28561536 - 28561459
Alignment:
| Q |
227 |
ggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttg |
304 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || || || |||| ||| ||||| ||||| ||||||||||||| |
|
|
| T |
28561536 |
ggtagatggattaaaggctacactaagaagaatgatgcatgagatgtcttgcatgccaagatgcaggggttgtatttg |
28561459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 474; Significance: 0; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 11 - 540
Target Start/End: Original strand, 24473141 - 24473670
Alignment:
| Q |
11 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggaca |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24473141 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggaca |
24473240 |
T |
|
| Q |
111 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
210 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
24473241 |
ttatctacataggatggaaacaacctcaggatagttggatcaagctcaacagcgacgatgcctgcaaggatatgggtcatatttctgggtttggtggtat |
24473340 |
T |
|
| Q |
211 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtata |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
24473341 |
ttttcgtgatgcagatggtaaatggattaaaggttacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttggatata |
24473440 |
T |
|
| Q |
311 |
gagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatg |
410 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24473441 |
gagatggcttggagtgagcattttgatcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacaagttcaagtttaatgggaata |
24473540 |
T |
|
| Q |
411 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24473541 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
24473640 |
T |
|
| Q |
511 |
tgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
24473641 |
tgctaattttagcatttctgtgaatcattt |
24473670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 113 - 529
Target Start/End: Original strand, 48618729 - 48619145
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || ||||| ||||||||||||||||| || || || ||||| ||||||| |||||| |||| |||| ||||| || ||| |
|
|
| T |
48618729 |
atctatataggttggaagcggcctcaagaaggttggatcaagcttaatagtgatggtgcttgcaaggttatgggggttattgccggatgtggcggccttt |
48618828 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
|| ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | | || |
|
|
| T |
48618829 |
tttgtgattcagatggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggctatatttggatttgga |
48618928 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
|||||||||||||| |||| | ||||||| ||||||||||| | ||||| ||||| |||||||||||||| | |||||||||||||||||| | |
|
|
| T |
48618929 |
catggcttggagggaacattactcttatcttatagtggaaagtgattcaaagattttgattgacatgatttctgataatttcaagtttaatgggaatatt |
48619028 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
||| |||||||| | ||||| |||||||||||| ||| |||| |||| ||| ||||||||||||||||||||||||||| ||||| |||||||| | |
|
|
| T |
48619029 |
cctgttttagtttactgtatccggaagctgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaataagagtgctgattggctcg |
48619128 |
T |
|
| Q |
513 |
ctaattttagcatttct |
529 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
48619129 |
ctaatttaagcatttct |
48619145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 113 - 519
Target Start/End: Complemental strand, 8020148 - 8019742
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || |||| ||||||||||||||||| || || || ||||| |||||||||||||| |||| || ||||| || ||| |
|
|
| T |
8020148 |
atctatataggttggaagcggcctcgagaaggttggatcaagcttaatagtgatggtgcttgcaaggatatgggggttattgttggatgtggcggccttt |
8020049 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
|||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | || |
|
|
| T |
8020048 |
ttcgtgattcagacggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtggggactatatttgggtttgga |
8019949 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||| ||||||||| | |
|
|
| T |
8019948 |
catggcttggagggaacattactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatatt |
8019849 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
||| |||||||| | |||||| |||| ||||||| ||| |||| |||| ||| ||| |||||||||||||||||||||||| ||||| |||||||| | |
|
|
| T |
8019848 |
cctgttttagtttaccgtatccggaatctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgctgattggctcg |
8019749 |
T |
|
| Q |
513 |
ctaattt |
519 |
Q |
| |
|
||||||| |
|
|
| T |
8019748 |
ctaattt |
8019742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 411 - 540
Target Start/End: Original strand, 24468593 - 24468722
Alignment:
| Q |
411 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24468593 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
24468692 |
T |
|
| Q |
511 |
tgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
24468693 |
tgctaattttagcatttctgtgaatcattt |
24468722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 55 - 529
Target Start/End: Complemental strand, 29214190 - 29213716
Alignment:
| Q |
55 |
agatattgaagactacaacttggagcactttcatagagggcctaaggtgacggacactatctacataggatggaaacgacctcaggaaggttggatcaag |
154 |
Q |
| |
|
|||||||||||||| || |||||||| ||||||| || || ||| ||| ||| | |||||| ||||| ||||| || |||| ||||||||||||||| |
|
|
| T |
29214190 |
agatattgaagactgtaatttggagcattttcatattggtccaaagttgaaggaaattatctatataggttggaagcggtctcatgaaggttggatcaag |
29214091 |
T |
|
| Q |
155 |
ctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtgatgcagatggtaaatggattaaaggctacactaaga |
254 |
Q |
| |
|
||||| || || ||||| |||||| ||||||| ||||| || ||||| || ||||||||||| ||| |||| |||| | ||| |||||||||||| |
|
|
| T |
29214090 |
ctcaatagtgatggtgcttgcaagaatatggggattatttttggatgtggcggcctttttcgtgatttagacggtagatgggtcaaatgctacactaaga |
29213991 |
T |
|
| Q |
255 |
agattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggagggagcattttgatcatcttattgtggaaag |
354 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||| |||| | ||||||||| | || |||||||||||||| ||| | ||||| | |||||||| |
|
|
| T |
29213990 |
agattagagcttgtgatgccttgcatgctgagatgt-ggggctatatttgggtttggacatggcttggagggaacatgactcttatcttgtagtggaaag |
29213892 |
T |
|
| Q |
355 |
tgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggat |
454 |
Q |
| |
|
||| | ||||| |||||||||||||||||||| | |||||||| ||||| ||| | || ||||| |||| || ||| |||||| ||| ||| | |
|
|
| T |
29213891 |
tgattcaaagattttgatcgacatgatttctgataatttcaagttcaatggaaatatttctgttttacttcaccggatccagaagctattgaagatgagt |
29213792 |
T |
|
| Q |
455 |
tggcatgtgcaaatcaaccatacttggcgtg-aaggaaatagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
||| |||| ||| |||||||||||||||||| ||| ||| || |||| ||||| || |||||||| ||||||||| |
|
|
| T |
29213791 |
tggaatgttcaactcaaccatacttggcgtgaaagaaaaaaggagtgttgattgactcgctaatttaagcatttct |
29213716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 24472740 - 24472654
Alignment:
| Q |
98 |
aaggtgacggacactatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatg |
184 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24472740 |
aaggtgacggacattatctacataggatggaaacaacctcaggatagttggatcaagctcaacagcgacggtgcctgcaaggatatg |
24472654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 8035770 - 8035826
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||||||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
8035770 |
ccatacttggcgtgaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
8035826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 354
Target Start/End: Complemental strand, 29760161 - 29760006
Alignment:
| Q |
200 |
tgtggtggtatttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtggggg-ttg |
298 |
Q |
| |
|
|||||||| ||||| ||||| || | || |||||||| || || || ||||||||||||||| ||||||||| ||||||| |||||| |||||| ||| |
|
|
| T |
29760161 |
tgtggtggccttttttgtgatacaaacggaaaatggatcaatggttatgctaagaagattggagtttgtgatgctttacatgttgagatatgggggattg |
29760062 |
T |
|
| Q |
299 |
tatttgggtatagagatggcttggagggagcattttgatcatcttattgtggaaag |
354 |
Q |
| |
|
|| |||| | || |||||||||||||| |||||| ||| ||||| |||||||| |
|
|
| T |
29760061 |
tacttggccttggaaatggcttggagggaacatttttctcaccttatagtggaaag |
29760006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 5350053 - 5350109
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||||||||| || | |||||| ||||||||||||||||| |||||||| |
|
|
| T |
5350053 |
ccatacttggcgtgaaggcaacaaaagtgcagattggcttgctaatttcagcatttc |
5350109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 28395757 - 28395677
Alignment:
| Q |
106 |
ggacactatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatggg |
186 |
Q |
| |
|
||||| |||||||||| ||||||| | ||| || |||||||||||||||||||| || || || || |||||||||||||| |
|
|
| T |
28395757 |
ggacattatctacatatgatggaagcaaccacaagaaggttggatcaagctcaatagtgatggcgcatgcaaggatatggg |
28395677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Complemental strand, 38110722 - 38110666
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
38110722 |
ccatacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
38110666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 46045967 - 46046022
Alignment:
| Q |
473 |
catacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
46045967 |
catacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
46046022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 25713261 - 25713334
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatggg |
186 |
Q |
| |
|
||||| ||||| ||||| || ||||| ||||||||||||||||||||||| || | ||| |||||||| ||||| |
|
|
| T |
25713261 |
atctatataggttggaagcggcctcaagaaggttggatcaagctcaacagtgatgatgcttgcaaggacatggg |
25713334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 427; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 11 - 540
Target Start/End: Complemental strand, 1223467 - 1222957
Alignment:
| Q |
11 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggaca |
110 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||| || |||| |
|
|
| T |
1223467 |
caaaggccgaataatccaaatatactaa-ccaaacatttgttagagatattgaagactacaacctggagctctttcatagagggcctaaggttacagaca |
1223369 |
T |
|
| Q |
111 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
1223368 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccgattgtggtggtat |
1223269 |
T |
|
| Q |
211 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtata |
310 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1223268 |
ttttcgtgacgcatatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtata |
1223169 |
T |
|
| Q |
311 |
gagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatg |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1223168 |
gagatggcttggagggagcattttgatcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatg |
1223069 |
T |
|
| Q |
411 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggct |
510 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
1223068 |
tgcctattttagttcatcgtatcaggaagctgctgagaatggattggca------------------ttggcgtgaaggaaatagaagtgccgattggct |
1222987 |
T |
|
| Q |
511 |
tgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
1222986 |
tgctaattttagcatttctgtgaatcattt |
1222957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 408; Significance: 0; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 62 - 540
Target Start/End: Complemental strand, 4560769 - 4560293
Alignment:
| Q |
62 |
gaagactacaacttggagcactttcatagagggcctaaggtgacggacactatctacataggatggaaacgacctcaggaaggttggatcaagctcaaca |
161 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4560769 |
gaagactacaacttggagcactttcataaagggcctaaggtggcggacactatctacataggatggaaacgacctcaggaaggttggatcaagctcgaca |
4560670 |
T |
|
| Q |
162 |
gcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattgg |
261 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560669 |
gcgatggtgcctgcaaggatatgggtcatattttcaattgtggtggtatttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattgg |
4560570 |
T |
|
| Q |
262 |
agcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggagggagcattttgatcatcttattgtggaaagtgacttg |
361 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4560569 |
agcttgtgatgccttacatactgagatgtgggggttgtatttgggtacagagatggc--ggagggagcattttgatcatcttattgtggaaagtgactcg |
4560472 |
T |
|
| Q |
362 |
aagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatg |
461 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560471 |
aagatattgatcgacatgatttctgaaaagttcaagtttaatgggaatatgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatg |
4560372 |
T |
|
| Q |
462 |
tgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4560371 |
tgcaaatcaaccatacttggcgtgaaggaaatagaagtgctgattgacttgctaattttagcatttctgtgaatcattt |
4560293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 11 - 540
Target Start/End: Original strand, 18883073 - 18883603
Alignment:
| Q |
11 |
caaaggccgaataatccaaatatactaatccaaacattcgttagagatattgaagactacaacttggagcactttcatagagggcctaaggtgacggaca |
110 |
Q |
| |
|
|||||||| ||||||||||||||| || || | | |||||||| ||||||||||||||| |||||||||||| |||||| |||||||||||||| ||| | |
|
|
| T |
18883073 |
caaaggccaaataatccaaatatattagtctagagattcgttaaagatattgaagactaaaacttggagcaccttcatatagggcctaaggtgaaggaga |
18883172 |
T |
|
| Q |
111 |
ctatctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtat |
210 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||| |
|
|
| T |
18883173 |
ctatcttcataggatggaaacgacctcaggaaggttggatcaagctcaacaacgacggtgcctccaaggatctaggtcatatttccggttgtggtggtat |
18883272 |
T |
|
| Q |
211 |
ttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtattt-gggtat |
309 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| || ||||||||||||||||||||| |||||| |
|
|
| T |
18883273 |
ttttcatgatgcagatggtaaatggattaaaggctgcactaataagattggaacttgtgatgccttacttgttgagatgtgggggttgtatttggggtat |
18883372 |
T |
|
| Q |
310 |
agagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaat |
409 |
Q |
| |
|
| | |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
18883373 |
aaatatggcttggagggagcattttgatcatcttatagtggaaaatgactcaaagatattgatcgacatgatttcggacaagtttaagtttaatgggaat |
18883472 |
T |
|
| Q |
410 |
gtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggc |
509 |
Q |
| |
|
| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
18883473 |
atccctattttagttcattgtatcaggaagctactgagaatggattgacatgtgcaaatcaaccatacttggcgcgaaggaaatagatatgccgattggc |
18883572 |
T |
|
| Q |
510 |
ttgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
|||||||||||||||||| ||||||| |||| |
|
|
| T |
18883573 |
ttgctaattttagcatttttgtgaataattt |
18883603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 235 - 540
Target Start/End: Original strand, 18933970 - 18934275
Alignment:
| Q |
235 |
gattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggagggagcatttt |
334 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
18933970 |
gattaaaggctacactaaaaagattggagcttgtgatgccttacatgctgagatgtggaggttgtatttgggtatagagatggcttagagggagcatttt |
18934069 |
T |
|
| Q |
335 |
gatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatca |
434 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18934070 |
gatcatcttattgtggaaagtgacccgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatca |
18934169 |
T |
|
| Q |
435 |
ggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaa |
534 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18934170 |
ggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaa |
18934269 |
T |
|
| Q |
535 |
tcattt |
540 |
Q |
| |
|
|||||| |
|
|
| T |
18934270 |
tcattt |
18934275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 55 - 519
Target Start/End: Complemental strand, 34081200 - 34080736
Alignment:
| Q |
55 |
agatattgaagactacaacttggagcactttcatagagggcctaaggtgacggacactatctacataggatggaaacgacctcaggaaggttggatcaag |
154 |
Q |
| |
|
|||||||||||| | ||||||||||| |||||| || || ||| ||| ||| | ||||| ||||| ||||| || |||| ||||||||||||||| |
|
|
| T |
34081200 |
agatattgaagattgtaacttggagcatattcatattggtccaaagttgaaggaaatcatctatataggttggaagcggcctcgagaaggttggatcaag |
34081101 |
T |
|
| Q |
155 |
ctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtgatgcagatggtaaatggattaaaggctacactaaga |
254 |
Q |
| |
|
|| || || || ||||| |||||||||||||| |||| | || ||||| ||| ||||||||||| |||| |||| |||||| |||||||||||||||| |
|
|
| T |
34081100 |
cttaatagtgatggtgcttgcaaggatatgggggttattgctggatgtggcggtctttttcgtgattcagacggtagatggatcaaaggctacactaaga |
34081001 |
T |
|
| Q |
255 |
agattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttggagggagcattttgatcatcttattgtggaaag |
354 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||| | | ||||||||| | || |||||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
34081000 |
agattggagcttgtgatgccttacatgctgataagtgggagctatatttgggtttggacatggcttggagggaacattactctcatcttatagtggaaag |
34080901 |
T |
|
| Q |
355 |
tgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggat |
454 |
Q |
| |
|
||| || ||||| ||||| || ||||||||||| | |||||||| |||| |||| | | | |||||||||| || ||| ||||||||||| |||| | |
|
|
| T |
34080900 |
tgatttaaagattttgatggatatgatttctgataaattcaagttcaatgcgaatattcttgttttagttcaccggatccagaagctgctgaagatgggt |
34080801 |
T |
|
| Q |
455 |
tggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattt |
519 |
Q |
| |
|
||| |||| ||| ||||||||||||||||||||||||| | |||| ||||||||||||||||| |
|
|
| T |
34080800 |
tggaatgttcaactcaaccatacttggcgtgaaggaaacatgagtgttgattggcttgctaattt |
34080736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 113 - 528
Target Start/End: Complemental strand, 18259542 - 18259128
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || |||| ||||||||||||||||| || || || |||| |||||||||||||| |||| | | |||| || ||| |
|
|
| T |
18259542 |
atctatataggttggaagcggcctcgagaaggttggatcaagcttaatagtgatagtgcttgcaaggatatgggggttattgttgat-gtggcggccttt |
18259444 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
|||||||| |||| |||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | || |
|
|
| T |
18259443 |
ttcgtgattcagacggtagatggatcaaagactacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggctatatttgggtctgga |
18259344 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
|||| ||||||||| |||| ||||||||| ||||||||||| | ||||| |||||||||||||||||||| | | ||| || ||||||||| | |
|
|
| T |
18259343 |
catggtttggagggaacattactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataattccaaattcaatgggaatatt |
18259244 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
| | |||||||| | || ||| |||||||||||| || ||| |||| ||| |||||||||| ||||| |||||||||| ||||| |||||||| | |
|
|
| T |
18259243 |
cttgttttagtttaccggatccggaagctgctgaagataagttgaaatgttcaactcaaccatacctggcgcgaaggaaatatgagtgctgattggctcg |
18259144 |
T |
|
| Q |
513 |
ctaattttagcatttc |
528 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
18259143 |
ctaatttaagcatttc |
18259128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 375 - 534
Target Start/End: Original strand, 42131343 - 42131502
Alignment:
| Q |
375 |
acatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaacca |
474 |
Q |
| |
|
||||||||||||| ||||| ||||||||| ||| | |||||||||||||| |||| |||||||| | | |||| |||||||||||||||||| || |
|
|
| T |
42131343 |
acatgatttctgagaagttccggtttaatggaaatatctctattttagttcattgtattaggaagctattaaaaatgaattggcatgtgcaaatcagtca |
42131442 |
T |
|
| Q |
475 |
tacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaa |
534 |
Q |
| |
|
| ||| | | ||||||||||||||| |||||| |||||| |||||| |||||||||||| |
|
|
| T |
42131443 |
tgcttagtggaaaggaaatagaagtgtcgattgacttgctcattttaacatttctgtgaa |
42131502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 337 - 529
Target Start/End: Original strand, 22540229 - 22540421
Alignment:
| Q |
337 |
tcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcagg |
436 |
Q |
| |
|
||||||||| || |||||||| | ||||| ||||||||| |||||||||| | |||||||| |||| ||| | ||| |||||||| | | ||| || |
|
|
| T |
22540229 |
tcatcttatagttgaaagtgattcaaagattttgatcgacgtgatttctgataatttcaagttcgatggaaatattcctgttttagtttactggatccgg |
22540328 |
T |
|
| Q |
437 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||||||||||||||||| |||||||||| |||| ||||| || |||||||| ||||||||| |
|
|
| T |
22540329 |
aagctgctgaagatgagttggaatgttcaactcaaccatacttggcgtaaaggaaataggagtgttgattgactcgctaatttaagcatttct |
22540421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Complemental strand, 240019 - 239963
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
240019 |
ccatacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
239963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 14024994 - 14025050
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
14024994 |
ccatacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
14025050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 32216697 - 32216774
Alignment:
| Q |
227 |
ggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttg |
304 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||| | ||| |||||||| |||| || |||| |||||||||||| |
|
|
| T |
32216697 |
ggtagatggattaaaggctacaataagaagattggtgtgtgtcatgccttatatgcagatatgtaagggttgtatttg |
32216774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 32386547 - 32386603
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||||||||| || | |||||| ||||| ||||||||||| |||||||| |
|
|
| T |
32386547 |
ccatacttggcgtgaaggcaacataagtgctgattgacttgctaatttcagcatttc |
32386603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 32786038 - 32786098
Alignment:
| Q |
453 |
attggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgc |
513 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||| ||||| |||||| |||| |
|
|
| T |
32786038 |
attggcatgtgcaaatcaatcatacttgttgtgaaggaaataaaagtgttgattggtttgc |
32786098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 496
Target Start/End: Original strand, 1189121 - 1189164
Alignment:
| Q |
453 |
attggcatgtgcaaatcaaccatacttggcgtgaaggaaataga |
496 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |||||| |
|
|
| T |
1189121 |
attggcatgtgcaaattaaccatacttgacgtgaaggcaataga |
1189164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 290 - 540
Target Start/End: Original strand, 17290001 - 17290251
Alignment:
| Q |
290 |
tgggggttgtatttgggtatagagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacg |
389 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17290001 |
tgggggttgtatttgggtgtagagatggcttggagggagcattttgatcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacg |
17290100 |
T |
|
| Q |
390 |
agttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaagg |
489 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
17290101 |
agttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatatttggcgtgaagg |
17290200 |
T |
|
| Q |
490 |
aaatagaagtgccgattggcttgctaattttagcatttctgtgaatcattt |
540 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17290201 |
aaatagaagtgccgattggcttgctaattttagtatttctgtgaatcattt |
17290251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 113 - 529
Target Start/End: Original strand, 13186683 - 13187099
Alignment:
| Q |
113 |
atctacataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtattt |
212 |
Q |
| |
|
||||| ||||| ||||| || |||| ||||||| ||||||||| || || || ||||| |||||||||||||| |||| | || ||||| || ||| |
|
|
| T |
13186683 |
atctatataggttggaagcggcctcgagaaggtttgatcaagcttaatagtgatggtgcttgcaaggatatgggggttattgctggatgtggcggccttt |
13186782 |
T |
|
| Q |
213 |
ttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtataga |
312 |
Q |
| |
|
|||||||| ||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | || |
|
|
| T |
13186783 |
ttcgtgatttagacggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtggggactatatttgggtttgga |
13186882 |
T |
|
| Q |
313 |
gatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtg |
412 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||||||||| | ||||| |||||||||||||||||||| | |||||||| ||||| ||| | |
|
|
| T |
13186883 |
catggcttggagggaacattactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatggaaatatt |
13186982 |
T |
|
| Q |
413 |
cctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttg |
512 |
Q |
| |
|
||| |||||||| | |||||| |||||||||||| | | |||| |||| ||| |||| ||||||||||||||||||||||| ||||| |||||||| | |
|
|
| T |
13186983 |
cctgttttagtttaccgtatccggaagctgctgaagacgagttggaatgttcaactcaatcatacttggcgtgaaggaaataggagtgctgattggctcg |
13187082 |
T |
|
| Q |
513 |
ctaattttagcatttct |
529 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
13187083 |
ctaatttaagcatttct |
13187099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 134 - 529
Target Start/End: Complemental strand, 7305465 - 7305068
Alignment:
| Q |
134 |
cctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtgatgcagatggtaaat |
233 |
Q |
| |
|
||||| ||||||||||||||||| || || || ||||| |||||||||||||| |||| | || |||||||| |||||| |||| |||| |||| || |
|
|
| T |
7305465 |
cctcaagaaggttggatcaagcttaatagtgatggtgcttgcaaggatatgggagttattgctggatgtggtggcctttttcatgattcagacggtagat |
7305366 |
T |
|
| Q |
234 |
ggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggcttgga--gggagcat |
331 |
Q |
| |
|
|||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| | || ||| |||||| |||| ||| |
|
|
| T |
7305365 |
ggatcaaagactacactaaaaagattggagcttgtgatgccttacatgctgagatgtgggggctatatttgggtttggacatgacttggagtgggaacat |
7305266 |
T |
|
| Q |
332 |
tttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgta |
431 |
Q |
| |
|
| ||||||||| ||||||||||| | ||||| |||||||||||||||||| | | |||||||| |||| |||| | ||| ||||| || | || | |
|
|
| T |
7305265 |
tactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctaataatttcaagttcaatgagaatattcctgttttactttaccgga |
7305166 |
T |
|
| Q |
432 |
tcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
|| |||| ||||||| ||| |||| || | ||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||| |
|
|
| T |
7305165 |
tccggaacctgctgaagatgagttggaattttcaactcaaccatacttggcgtgaaggaaataggagtgctgattggctctctaatttaagcatttct |
7305068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 210 - 500
Target Start/End: Complemental strand, 40190726 - 40190436
Alignment:
| Q |
210 |
tttttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtat |
309 |
Q |
| |
|
||||||||||| |||| | || |||||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||| | |
|
|
| T |
40190726 |
tttttcgtgattcagacgttagatggatcaaaggctacattaagaagattggagcttgtgatgccttatatgctaagatgtgggggctatatttggactt |
40190627 |
T |
|
| Q |
310 |
agagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaat |
409 |
Q |
| |
|
||| ||||||||||| ||||||| ||||||||| ||||||||||| | ||||| |||||||| ||||||||||| | || ||||| |||| || |
|
|
| T |
40190626 |
agacatggcttggagcgagcattactctcatcttatagtggaaagtgattcaaagattttgatcgatatgatttctgataattttaagttcaatgaacat |
40190527 |
T |
|
| Q |
410 |
gtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtg |
500 |
Q |
| |
|
| ||||||||||| || | ||| || ||||||| ||| |||| |||| ||| ||||||||||||| | |||||||||||| |||| |
|
|
| T |
40190526 |
attcctattttagtccaccagatcccaaaactgctgaagatgagttggaatgttcaactcaaccatacttgacatgaaggaaataggagtg |
40190436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 392 - 529
Target Start/End: Original strand, 6598993 - 6599130
Alignment:
| Q |
392 |
ttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaa |
491 |
Q |
| |
|
|||||||| ||||||||| | ||| |||||||||| || ||| ||||| |||||| ||| ||||| |||| ||| ||||||||| |||||||||||||| |
|
|
| T |
6598993 |
ttcaagttcaatgggaatattcctgttttagttcaccggatccggaagttgctgaagatgaattggaatgttcaactcaaccataattggcgtgaaggaa |
6599092 |
T |
|
| Q |
492 |
atagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
||| ||||| |||||||| |||||||| ||||||||| |
|
|
| T |
6599093 |
ataagagtgctgattggctcgctaatttaagcatttct |
6599130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 388
Target Start/End: Complemental strand, 26381576 - 26381400
Alignment:
| Q |
212 |
tttcgtgatgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatag |
311 |
Q |
| |
|
|||||||| |||| |||| ||||||||||| |||||||||||||||||| || |||||| |||||| ||||||||||||| |||||||||| | | | |
|
|
| T |
26381576 |
tttcgtgactcagaaggtagatggattaaagactacactaagaagattggtgcgtgtgataacttacaagctgagatgtgggcgttgtatttgagattgg |
26381477 |
T |
|
| Q |
312 |
agatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgac |
388 |
Q |
| |
|
| ||||||||||| |||| |||| |||||| | ||||| || | || ||||| ||||| ||||||||||||||| |
|
|
| T |
26381476 |
acatggcttggagagagcgtttttctcatctaaaagtggagagcggctcaaagattttgattgacatgatttctgac |
26381400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 125 - 288
Target Start/End: Complemental strand, 37307607 - 37307445
Alignment:
| Q |
125 |
tggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtgatgcag |
224 |
Q |
| |
|
||||| || ||||| |||||||||| ||||||||||| || ||||| ||||| |||| | | |||| | || ||||| | | ||||||||||| ||| |
|
|
| T |
37307607 |
tggaagcggcctcaagaaggttggaccaagctcaacat-gatggtgcttgcaaagatacgagggttattgctggatgtggcgatctttttcgtgattcag |
37307509 |
T |
|
| Q |
225 |
atggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagat |
288 |
Q |
| |
|
| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
37307508 |
acggtagatggatcaaaggctacactaagaagattggagcttgtgatgccttatatgttgagat |
37307445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 529
Target Start/End: Complemental strand, 37307448 - 37307282
Alignment:
| Q |
363 |
agatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcaggaagctgctgagaatggattggcatgt |
462 |
Q |
| |
|
|||| |||||||||||||||||||| | |||||||| |||| |||| | ||| |||||||| | || ||| | ||| ||| || ||| ||| |||| |
|
|
| T |
37307448 |
agattttgatcgacatgatttctgataatttcaagttcaatgagaatattcctgttttagtttaccggatctgaaagttgccgaagatgagttgaaatgt |
37307349 |
T |
|
| Q |
463 |
gcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttct |
529 |
Q |
| |
|
||| ||||||||||||| |||||||||||||| ||||| |||||||| | ||| || ||||||||| |
|
|
| T |
37307348 |
tcaactcaaccatacttgacgtgaaggaaataggagtgctgattggctcgttaacttaagcatttct |
37307282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 424
Target Start/End: Complemental strand, 28372102 - 28371970
Alignment:
| Q |
292 |
ggggttgtatttgggtatagagatggcttggagggagcattttgatcatcttattgtggaaagtgacttgaagatattgatcgacatgatttctgacgag |
391 |
Q |
| |
|
||||||||||||||||||||| ||| ||| || ||||||||||||||||| || || |||||| ||| ||||||||| || | || |||| || | | |
|
|
| T |
28372102 |
ggggttgtatttgggtatagacatgacttctagagagcattttgatcatctcatagttgaaagttactctaagatattgttcaatataatttttgtcaat |
28372003 |
T |
|
| Q |
392 |
ttcaagtttaatgggaatgtgcctattttagtt |
424 |
Q |
| |
|
|||||||||||||| ||| | ||||||||||| |
|
|
| T |
28372002 |
ttcaagtttaatggaaatatttctattttagtt |
28371970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 417 - 529
Target Start/End: Complemental strand, 40426267 - 40426155
Alignment:
| Q |
417 |
ttttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaa |
516 |
Q |
| |
|
|||||||| | |||||| |||||||||||| ||| |||| |||| ||| ||| ||||| |||| ||||||||||||| ||||| ||||| || ||||| |
|
|
| T |
40426267 |
ttttagtttaccgtatccggaagctgctgaagatgagttggaatgttcaactcacccatatttggtgtgaaggaaataggagtgctgattgactcgctaa |
40426168 |
T |
|
| Q |
517 |
ttttagcatttct |
529 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
40426167 |
tttaagcatttct |
40426155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 516
Target Start/End: Complemental strand, 26381328 - 26381267
Alignment:
| Q |
455 |
tggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaa |
516 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||| |||| |||||||||||||| |
|
|
| T |
26381328 |
tggcatgtgcaaatcaaccatacttcgtgtgaaggaaataaaagttttgattggcttgctaa |
26381267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 40615087 - 40615032
Alignment:
| Q |
473 |
catacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
||||||||||||||||| || |||||||| |||||| |||||||||| |||||||| |
|
|
| T |
40615087 |
catacttggcgtgaaggtaacagaagtgcagattggtttgctaatttcagcatttc |
40615032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 528
Target Start/End: Complemental strand, 11995779 - 11995725
Alignment:
| Q |
474 |
atacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||||||| || |||||||| ||||| ||||||||||| |||||||| |
|
|
| T |
11995779 |
atacttggcgtgaaggcaacagaagtgcagattgtcttgctaatttcagcatttc |
11995725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 522
Target Start/End: Original strand, 6372673 - 6372741
Alignment:
| Q |
454 |
ttggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttag |
522 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||| | | || |||||||| ||||||||||| |
|
|
| T |
6372673 |
ttggcaagttcaaatcaaccatacttggcgtgaaggaaacaaatcggctgattggctagctaattttag |
6372741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 42865976 - 42866032
Alignment:
| Q |
472 |
ccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttc |
528 |
Q |
| |
|
|||||||||||| ||||| || | |||||| ||||||||||||||||| |||||||| |
|
|
| T |
42865976 |
ccatacttggcgggaaggcaacaaaagtgcagattggcttgctaatttcagcatttc |
42866032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 3733159 - 3733098
Alignment:
| Q |
233 |
tggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggg |
294 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||| ||||||| ||||||||||| |
|
|
| T |
3733159 |
tggatcaaaggctacatgaagaagattggttcttgtgatgctctacatgcggagatgtgggg |
3733098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 521
Target Start/End: Original strand, 24467731 - 24467791
Alignment:
| Q |
461 |
gtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaatttta |
521 |
Q |
| |
|
|||||| ||||||||| ||| || || ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
24467731 |
gtgcaattcaaccatatttgacgggagggaaatagaagtgttgattggcttcctaatttta |
24467791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 187
Target Start/End: Complemental strand, 40196849 - 40196717
Alignment:
| Q |
55 |
agatattgaagactacaacttggagcactttcatagagggcctaaggtgacggacactatctacataggatggaaacgacctcaggaaggttggatcaag |
154 |
Q |
| |
|
|||||||||||| | ||||||||||| |||||| || || ||| ||| |||| ||||| ||||| ||||| || |||| ||||||||||||||| |
|
|
| T |
40196849 |
agatattgaagaatgtaacttggagcatcttcatattggtccaaagttgaaagacatcatctatataggttggaagcggcctcgagaaggttggatcaag |
40196750 |
T |
|
| Q |
155 |
ctcaacagcgacggtgcctgcaaggatatgggt |
187 |
Q |
| |
|
||||||| | ||||| |||||| |||||||| |
|
|
| T |
40196749 |
ctcaacaatggtggtgcttgcaagaatatgggt |
40196717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 138; Significance: 7e-72; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 119 - 523
Target Start/End: Original strand, 355705 - 356109
Alignment:
| Q |
119 |
ataggatggaaacgacctcaggaaggttggatcaagctcaacagcgacggtgcctgcaaggatatgggtcatatttccggttgtggtggtatttttcgtg |
218 |
Q |
| |
|
|||||||| || | ||| || ||||||| |||||||||||||| || ||||| |||||||||| ||||||||||| | |||||||| | ||||| ||| |
|
|
| T |
355705 |
ataggatgaaagcaaccacaagaaggttcgatcaagctcaacaatgatggtgcatgcaaggataggggtcatattttggattgtggtgatcttttttgtg |
355804 |
T |
|
| Q |
219 |
atgcagatggtaaatggattaaaggctacactaagaagattggagcttgtgatgccttacatgctgagatgtgggggttgtatttgggtatagagatggc |
318 |
Q |
| |
|
|| | |||||||||| |||||||| |||||||||| ||||| || | ||||||||||||||| || |||| ||||||||||||||||||||| |||| |
|
|
| T |
355805 |
attcgtatggtaaatgaattaaaggatacactaagacgattgaagtctttgatgccttacatgccgaaatgt-ggggttgtatttgggtatagatgtggc |
355903 |
T |
|
| Q |
319 |
ttggagggagcattttgatcatcttattgtggaaagtgact-tgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctat |
417 |
Q |
| |
|
||||||||||| |||||||||||||| || |||| ||||| | ||||||||||||||||| |||| | || | |||||||||||| ||||| | ||||| |
|
|
| T |
355904 |
ttggagggagcgctttgatcatcttatagtagaaaatgactcttaagatattgatcgacattatttgtcacaatttcaagtttaataggaatatccctat |
356003 |
T |
|
| Q |
418 |
tttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaat |
517 |
Q |
| |
|
||||||||||| ||| |||||| |||||| |||| ||| ||||||||||||||| ||| ||| | |||| ||||| |||||| |||| |||||||| |
|
|
| T |
356004 |
tttagttcatcatattaggaagttgctgaaaatgaattaacatgtgcaaatcaactatatttgacccgaagaaaatacaagtgctgattaacttgctaac |
356103 |
T |
|
| Q |
518 |
tttagc |
523 |
Q |
| |
|
|||||| |
|
|
| T |
356104 |
tttagc |
356109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0736 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0736
Description:
Target: scaffold0736; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 522
Target Start/End: Original strand, 6520 - 6589
Alignment:
| Q |
453 |
attggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttag |
522 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||| |||||| ||||||||| | ||||| ||||| |
|
|
| T |
6520 |
attggcatgtttaaattaaccatacttggcgtgaaggcaatagagcagccgattggttagctaactttag |
6589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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