View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18089_low_62 (Length: 208)
Name: NF18089_low_62
Description: NF18089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18089_low_62 |
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Alignment Details
Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 46618726 - 46618553
Alignment:
| Q |
12 |
atgaacattatgctacctacagagactcttacctaaaggaatcattggatgcaccatggacttcaatgactactaccttagatgaaactgctttcaaagc |
111 |
Q |
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| T |
46618726 |
atgaacattatgctacctacagagactcttacctaaaggaatcattggatgcaccatggacttcaatgactactaccttagatgaaactgctttcaaagc |
46618627 |
T |
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| Q |
112 |
caaacaacgcctacagaagaaacttggtcacttcttttcctcttccaggtacatccactcctacagaataatac |
185 |
Q |
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| T |
46618626 |
caaacaacgcctacagaagaaacttggtcacttcttttcctcttcaaggtacatccactcctacagaataatac |
46618553 |
T |
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