View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1809-Insertion-13 (Length: 552)
Name: NF1809-Insertion-13
Description: NF1809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1809-Insertion-13 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 505; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 505; E-Value: 0
Query Start/End: Original strand, 7 - 552
Target Start/End: Original strand, 38706726 - 38707270
Alignment:
| Q |
7 |
agatttaatgtagtagtgatatgcgttgatgcagttttttacgaagataatattaaaatcacttaattatggtatttgctgatgcannnnnnnngtttta |
106 |
Q |
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| T |
38706726 |
agatttaatgtagtagtgatatgcgttgatgcagttttttacgaagataatattaaaatcacttaattatggtatttgctgatgcattttttt-gtttta |
38706824 |
T |
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| Q |
107 |
attctaagcaggctgaagcagtttgtttatcaccccaataggccaaaactataagttgatttctttcttgattaactctggatacaattgagatcattta |
206 |
Q |
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| T |
38706825 |
attctaagcaggctgaagcagtttgtttatcaccccaataggccaaaactataagttgatttctttcttgattaaatctggatacaattgagatcattta |
38706924 |
T |
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| Q |
207 |
ggacccaagtttacacagtggatgtgaatgatggatgtttctgaggttgaagaaagtttctttgccgcaagcgatgccaaggtatgacataacttttcta |
306 |
Q |
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| T |
38706925 |
ggacccaagtttacacagtggatgtgaatgatggatgtttctgaggttgaagaaagtttctttgccgcaagcgatgccaaggtatgacataacttttcta |
38707024 |
T |
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| Q |
307 |
atggcaaatgttagttgctagttatgattttatcggtgaggggagtaaaagaaaagtgaccaagtccttatgcaaccgtataaattaaggacaagcagtc |
406 |
Q |
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| T |
38707025 |
atggcaaatgttagttgctagttatgattttatcggtgaggggagtaaaagaaaagtgaccaagtccttatgcaacggtataaattaaggacaagcagtc |
38707124 |
T |
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| Q |
407 |
aacttgcttaagtattaattgtttaacattttgttttaaatttacttagaaagattttaagaaaatgcgttgaattgcatgccaaactaaaaatatagag |
506 |
Q |
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| T |
38707125 |
aacttgcttaagtattaattgtttaacattttgttttacatttacttagaaagattttaagaaaatgcgttgaattgcatgccaaactaaaaatatagag |
38707224 |
T |
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| Q |
507 |
caaatattttgcattcattctctaccatgctttttctgcccatcgt |
552 |
Q |
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| T |
38707225 |
caaatattttgcattcattctctaccatgctttttctgcccatcgt |
38707270 |
T |
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