View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1809-Insertion-17 (Length: 326)
Name: NF1809-Insertion-17
Description: NF1809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1809-Insertion-17 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 8 - 326
Target Start/End: Original strand, 2109059 - 2109383
Alignment:
| Q |
8 |
gggagaacaaaaatacagtgcagggtttca-atgtgagccacggtcacctcactgtgaatagtaattataaggtccaataaataaata----tgtaagca |
102 |
Q |
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| T |
2109059 |
gggagaacaaaaatacagtgcagggtttcatatgtgagccacggtcacctcactgggaatagtaattataaggcccaataaataaataaatatgtaaaca |
2109158 |
T |
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| Q |
103 |
cattaatgaacaatgattaaacaagtttaacaa-tctggaagcattttgcacaagcacgtgtaagaggataatattaaaatgacaaaccaatagatagag |
201 |
Q |
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| T |
2109159 |
cattaatgaacaatgattaaacaagtttaacaaatctggaagcattttgcacaagcacgtgcaagaggataatattaaaatgacaaaccaatagatagag |
2109258 |
T |
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| Q |
202 |
cttattacagtggacaatgctgcaacaactatagagaaaaccaactgaaatcaagtagatcaagaaacaaatgttctttgagtagctaaaaagatgacat |
301 |
Q |
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| T |
2109259 |
tttattacagtggacaatgctgcaacaactattgagaaaaccaactgaaatcaagtagatcaagaaacaaatgttctttaagtagctaaaaagatgacat |
2109358 |
T |
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| Q |
302 |
cttatgtgcaattcagttcctatta |
326 |
Q |
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| T |
2109359 |
cttatgtgcaattcagttcctatta |
2109383 |
T |
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