View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1809-Insertion-28 (Length: 180)
Name: NF1809-Insertion-28
Description: NF1809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1809-Insertion-28 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 7e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 7e-91
Query Start/End: Original strand, 7 - 179
Target Start/End: Complemental strand, 32360117 - 32359945
Alignment:
| Q |
7 |
acaccaccactctctgcgaaaccctcttcaatcaactcaacgccaagttcgaagaattcttctcccatctccctctacaccattatgagaatctctctgg |
106 |
Q |
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| T |
32360117 |
acaccaccactctctgcgaaaccctcttcaatcaactcaacgccaagttcgaagaattcttctcccatctccctctacaccatcatgagaatctctctgg |
32360018 |
T |
|
| Q |
107 |
gccccttccgcctccggattcacggttgtctccacttgttgaacatctttctctcatacttcgccgctctctg |
179 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32360017 |
gccccttccgcctccggattcacggttgtctccacttgttgaacatctttctctcatacttcgccgctctctg |
32359945 |
T |
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