View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18092_low_4 (Length: 369)

Name: NF18092_low_4
Description: NF18092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18092_low_4
NF18092_low_4
[»] chr4 (57 HSPs)
chr4 (90-353)||(31188003-31188267)
chr4 (1-99)||(857306-857405)
chr4 (4-94)||(49111382-49111473)
chr4 (1-94)||(28845938-28846032)
chr4 (1-92)||(7352879-7352971)
chr4 (1-97)||(11040963-11041059)
chr4 (1-92)||(41498557-41498649)
chr4 (18-95)||(15660267-15660345)
chr4 (18-94)||(36455905-36455982)
chr4 (19-94)||(31473847-31473923)
chr4 (3-97)||(15660178-15660273)
chr4 (19-92)||(1112605-1112679)
chr4 (18-95)||(1112706-1112784)
chr4 (18-99)||(4896716-4896798)
chr4 (29-95)||(7352809-7352875)
chr4 (18-95)||(10128058-10128136)
chr4 (19-96)||(14982276-14982354)
chr4 (1-97)||(42844610-42844707)
chr4 (3-86)||(10127980-10128064)
chr4 (19-86)||(10633038-10633106)
chr4 (19-84)||(1539649-1539715)
chr4 (18-95)||(2125854-2125932)
chr4 (29-95)||(4896645-4896711)
chr4 (1-86)||(26250915-26251001)
chr4 (1-92)||(1107051-1107144)
chr4 (34-91)||(4441338-4441395)
chr4 (34-95)||(11348338-11348399)
chr4 (18-86)||(28845877-28845946)
chr4 (18-98)||(36456010-36456091)
chr4 (18-80)||(42844555-42844618)
chr4 (32-94)||(1107151-1107213)
chr4 (38-99)||(16516164-16516225)
chr4 (18-95)||(35470119-35470197)
chr4 (10-94)||(467879-467962)
chr4 (2-54)||(4441396-4441449)
chr4 (43-92)||(31742874-31742923)
chr4 (35-95)||(5715741-5715801)
chr4 (19-94)||(55266860-55266936)
chr4 (45-86)||(42542979-42543020)
chr4 (18-65)||(857266-857314)
chr4 (18-94)||(41498487-41498565)
chr4 (57-94)||(26251015-26251052)
chr4 (29-86)||(31742782-31742839)
chr4 (18-65)||(29091164-29091212)
chr4 (35-90)||(9451148-9451203)
chr4 (18-92)||(31947590-31947666)
chr4 (57-96)||(53760810-53760849)
chr4 (1-50)||(14982347-14982396)
chr4 (1-31)||(36455974-36456004)
chr4 (57-95)||(42775620-42775658)
chr4 (5-50)||(46724195-46724241)
chr4 (29-74)||(12169037-12169081)
chr4 (35-84)||(19461752-19461801)
chr4 (18-54)||(26250993-26251030)
chr4 (18-73)||(10354361-10354417)
chr4 (18-92)||(41139475-41139548)
chr4 (57-93)||(47108317-47108353)
[»] chr1 (61 HSPs)
chr1 (1-95)||(15034726-15034821)
chr1 (1-92)||(23536067-23536159)
chr1 (4-95)||(30190206-30190298)
chr1 (1-92)||(4038075-4038167)
chr1 (3-86)||(27804271-27804355)
chr1 (3-97)||(40264099-40264194)
chr1 (18-95)||(34756424-34756502)
chr1 (1-92)||(27935552-27935644)
chr1 (18-96)||(24273218-24273297)
chr1 (1-95)||(50005146-50005241)
chr1 (1-86)||(28745863-28745949)
chr1 (18-96)||(4038159-4038238)
chr1 (18-92)||(15034659-15034734)
chr1 (1-83)||(32572989-32573072)
chr1 (18-92)||(29446750-29446824)
chr1 (1-86)||(34756494-34756580)
chr1 (29-95)||(45565391-45565457)
chr1 (18-97)||(44410306-44410386)
chr1 (18-92)||(26501077-26501152)
chr1 (18-84)||(28745805-28745871)
chr1 (35-94)||(6470702-6470761)
chr1 (18-92)||(8224768-8224843)
chr1 (1-95)||(38277482-38277576)
chr1 (19-92)||(38277415-38277489)
chr1 (29-86)||(37036959-37037016)
chr1 (1-69)||(37214842-37214911)
chr1 (18-94)||(47165210-47165287)
chr1 (18-86)||(28632584-28632652)
chr1 (1-92)||(44410378-44410470)
chr1 (19-92)||(43622977-43623051)
chr1 (18-83)||(44570687-44570753)
chr1 (1-54)||(45565461-45565515)
chr1 (35-92)||(32287949-32288006)
chr1 (32-92)||(27804364-27804424)
chr1 (18-92)||(50005079-50005154)
chr1 (18-83)||(37448399-37448465)
chr1 (7-95)||(25889155-25889243)
chr1 (18-85)||(37447900-37447968)
chr1 (18-86)||(51847858-51847926)
chr1 (29-92)||(31166310-31166373)
chr1 (18-92)||(49659217-49659291)
chr1 (1-54)||(5474437-5474491)
chr1 (57-95)||(32572937-32572975)
chr1 (5-50)||(47074177-47074223)
chr1 (57-99)||(48953580-48953622)
chr1 (18-62)||(5474483-5474528)
chr1 (52-92)||(5474417-5474457)
chr1 (3-50)||(17502222-17502270)
chr1 (57-97)||(23536173-23536213)
chr1 (18-54)||(37214903-37214939)
chr1 (57-92)||(15245460-15245495)
chr1 (18-80)||(31195468-31195531)
chr1 (38-96)||(946372-946429)
chr1 (18-75)||(946930-946988)
chr1 (19-92)||(10166499-10166573)
chr1 (57-95)||(37214924-37214962)
chr1 (38-76)||(52280972-52281010)
chr1 (57-94)||(32128046-32128083)
chr1 (18-54)||(32572960-32572997)
chr1 (37-93)||(32652205-32652261)
chr1 (18-54)||(48953607-48953643)
[»] chr3 (52 HSPs)
chr3 (1-92)||(44692889-44692981)
chr3 (1-99)||(28092207-28092306)
chr3 (3-92)||(9129413-9129503)
chr3 (3-92)||(9137520-9137610)
chr3 (3-92)||(27251963-27252053)
chr3 (18-94)||(46672800-46672877)
chr3 (1-92)||(5415783-5415875)
chr3 (2-96)||(39110390-39110485)
chr3 (1-95)||(46429463-46429558)
chr3 (1-97)||(31070473-31070570)
chr3 (29-92)||(44436258-44436321)
chr3 (1-95)||(47284293-47284388)
chr3 (18-92)||(49457343-49457418)
chr3 (18-95)||(36397986-36398064)
chr3 (18-95)||(44692819-44692897)
chr3 (18-86)||(21307529-21307598)
chr3 (19-95)||(47767429-47767506)
chr3 (18-76)||(31070422-31070481)
chr3 (1-59)||(44436325-44436384)
chr3 (19-96)||(37054390-37054468)
chr3 (18-92)||(5415867-5415942)
chr3 (38-92)||(42005971-42006025)
chr3 (38-86)||(35279920-35279968)
chr3 (18-84)||(19475824-19475891)
chr3 (18-92)||(34088571-34088646)
chr3 (18-92)||(53129840-53129915)
chr3 (18-95)||(48947602-48947680)
chr3 (19-96)||(53470427-53470505)
chr3 (18-94)||(37321548-37321625)
chr3 (36-84)||(671635-671683)
chr3 (36-92)||(7302346-7302402)
chr3 (32-92)||(9129344-9129404)
chr3 (32-92)||(9137451-9137511)
chr3 (1-54)||(332012-332067)
chr3 (1-95)||(39215905-39216000)
chr3 (35-97)||(30767099-30767161)
chr3 (1-86)||(42130698-42130784)
chr3 (18-74)||(30766571-30766628)
chr3 (3-54)||(25655335-25655387)
chr3 (19-94)||(31189395-31189471)
chr3 (35-95)||(44288474-44288534)
chr3 (36-92)||(46001364-46001420)
chr3 (57-97)||(46429409-46429449)
chr3 (19-92)||(21730902-21730975)
chr3 (18-86)||(52527042-52527111)
chr3 (35-94)||(46635855-46635914)
chr3 (48-94)||(2732637-2732683)
chr3 (57-95)||(25655312-25655350)
chr3 (57-86)||(27485478-27485507)
chr3 (18-73)||(7976567-7976623)
chr3 (3-31)||(40929676-40929704)
chr3 (43-75)||(50168633-50168665)
[»] chr2 (51 HSPs)
chr2 (1-92)||(14537199-14537291)
chr2 (1-95)||(11716405-11716500)
chr2 (1-92)||(14365700-14365793)
chr2 (18-97)||(41461599-41461679)
chr2 (18-92)||(27033490-27033565)
chr2 (1-92)||(784793-784885)
chr2 (32-95)||(14365798-14365861)
chr2 (29-92)||(17180297-17180360)
chr2 (1-99)||(41461508-41461607)
chr2 (18-99)||(1583807-1583889)
chr2 (18-94)||(784877-784954)
chr2 (18-92)||(10480119-10480194)
chr2 (35-86)||(11684605-11684656)
chr2 (18-99)||(13017772-13017854)
chr2 (8-97)||(44256181-44256270)
chr2 (18-86)||(11532251-11532320)
chr2 (35-84)||(11716501-11716550)
chr2 (18-86)||(11793901-11793970)
chr2 (18-92)||(769036-769111)
chr2 (18-92)||(33189255-33189330)
chr2 (19-92)||(11141305-11141379)
chr2 (1-54)||(11684657-11684711)
chr2 (19-84)||(30698289-30698355)
chr2 (18-95)||(35047677-35047755)
chr2 (18-92)||(39630225-39630299)
chr2 (32-95)||(10244174-10244237)
chr2 (35-86)||(28740602-28740653)
chr2 (32-94)||(45094484-45094546)
chr2 (35-99)||(3092275-3092339)
chr2 (18-92)||(17905654-17905729)
chr2 (38-92)||(7228031-7228085)
chr2 (1-54)||(11824718-11824772)
chr2 (1-92)||(14954266-14954359)
chr2 (5-54)||(3345816-3345867)
chr2 (1-54)||(10244244-10244298)
chr2 (57-95)||(14537305-14537343)
chr2 (23-95)||(8735841-8735914)
chr2 (18-91)||(30751345-30751418)
chr2 (18-86)||(40026070-40026139)
chr2 (19-66)||(7167666-7167714)
chr2 (57-97)||(21504463-21504503)
chr2 (18-65)||(32839646-32839694)
chr2 (35-90)||(29279035-29279090)
chr2 (57-95)||(8736461-8736499)
chr2 (19-88)||(11606717-11606787)
chr2 (57-95)||(11824786-11824824)
chr2 (18-59)||(14954351-14954393)
chr2 (1-50)||(27033557-27033607)
chr2 (57-86)||(3345769-3345798)
chr2 (57-86)||(19231305-19231334)
chr2 (46-86)||(39477976-39478016)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-95)||(472-567)
scaffold1562 (32-92)||(405-465)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-95)||(2026-2121)
scaffold1158 (32-92)||(2128-2188)
[»] chr5 (58 HSPs)
chr5 (1-95)||(9764405-9764500)
chr5 (1-96)||(15373956-15374052)
chr5 (1-94)||(20523131-20523225)
chr5 (18-92)||(40643902-40643976)
chr5 (1-94)||(2316446-2316539)
chr5 (1-97)||(32390039-32390136)
chr5 (1-97)||(6634010-6634106)
chr5 (1-92)||(40809341-40809433)
chr5 (20-86)||(2721557-2721624)
chr5 (4-98)||(28828417-28828512)
chr5 (15-92)||(15804322-15804400)
chr5 (18-95)||(37722889-37722967)
chr5 (18-94)||(26281264-26281341)
chr5 (32-92)||(15374059-15374119)
chr5 (18-91)||(3563278-3563352)
chr5 (1-86)||(16515011-16515096)
chr5 (18-91)||(20523217-20523291)
chr5 (19-95)||(22303866-22303943)
chr5 (18-94)||(22766950-22767027)
chr5 (32-92)||(2316378-2316438)
chr5 (18-92)||(9764338-9764413)
chr5 (18-92)||(25935285-25935360)
chr5 (18-92)||(40090409-40090484)
chr5 (3-92)||(23092031-23092121)
chr5 (37-86)||(28828373-28828422)
chr5 (18-97)||(16515102-16515182)
chr5 (19-86)||(19533903-19533971)
chr5 (5-95)||(32470953-32471042)
chr5 (18-92)||(927302-927377)
chr5 (19-85)||(37145497-37145564)
chr5 (18-92)||(41762210-41762285)
chr5 (18-86)||(9894317-9894386)
chr5 (38-99)||(15804399-15804460)
chr5 (29-84)||(32470890-32470945)
chr5 (32-91)||(33245382-33245441)
chr5 (32-86)||(32389978-32390032)
chr5 (34-92)||(34982216-34982273)
chr5 (37-82)||(13243469-13243514)
chr5 (35-92)||(32250111-32250167)
chr5 (19-95)||(40809426-40809503)
chr5 (32-95)||(23091960-23092022)
chr5 (35-94)||(35379342-35379400)
chr5 (1-54)||(40643856-40643910)
chr5 (19-88)||(8255031-8255100)
chr5 (19-86)||(14834830-14834898)
chr5 (18-96)||(6634098-6634177)
chr5 (43-86)||(13243514-13243557)
chr5 (57-96)||(33146057-33146096)
chr5 (57-96)||(33146187-33146226)
chr5 (57-99)||(22305105-22305147)
chr5 (47-92)||(5658776-5658821)
chr5 (57-92)||(2550328-2550363)
chr5 (29-92)||(10314649-10314712)
chr5 (57-95)||(22302536-22302574)
chr5 (57-95)||(34982313-34982351)
chr5 (43-84)||(12991333-12991374)
chr5 (18-54)||(22305132-22305169)
chr5 (19-54)||(2550348-2550384)
[»] chr8 (50 HSPs)
chr8 (1-92)||(17110869-17110961)
chr8 (18-96)||(3853612-3853691)
chr8 (18-96)||(3858070-3858149)
chr8 (5-86)||(30435252-30435333)
chr8 (16-92)||(42711362-42711439)
chr8 (1-86)||(3853683-3853769)
chr8 (1-86)||(3858141-3858227)
chr8 (18-95)||(17110953-17111031)
chr8 (32-94)||(33902665-33902727)
chr8 (3-86)||(13404833-13404917)
chr8 (35-99)||(28324688-28324752)
chr8 (32-95)||(14800059-14800122)
chr8 (18-96)||(29257359-29257438)
chr8 (18-94)||(24044958-24045035)
chr8 (20-92)||(40046804-40046877)
chr8 (18-94)||(44889352-44889429)
chr8 (19-82)||(13404912-13404976)
chr8 (18-92)||(23011734-23011809)
chr8 (18-92)||(33377305-33377380)
chr8 (32-86)||(4156266-4156320)
chr8 (1-92)||(33902732-33902825)
chr8 (13-94)||(37268086-37268168)
chr8 (35-92)||(14991692-14991749)
chr8 (18-86)||(29482815-29482884)
chr8 (18-86)||(44346686-44346755)
chr8 (29-92)||(31807409-31807471)
chr8 (32-86)||(8689138-8689192)
chr8 (19-92)||(33986004-33986078)
chr8 (19-92)||(36103101-36103175)
chr8 (1-54)||(14799999-14800052)
chr8 (18-86)||(35979012-35979081)
chr8 (19-94)||(515541-515617)
chr8 (16-75)||(40046872-40046932)
chr8 (19-77)||(8049269-8049328)
chr8 (44-99)||(32626069-32626124)
chr8 (19-92)||(14239-14312)
chr8 (47-92)||(27322687-27322732)
chr8 (29-92)||(1088297-1088360)
chr8 (18-92)||(11744727-11744802)
chr8 (57-96)||(34008795-34008834)
chr8 (57-95)||(29611385-29611423)
chr8 (57-97)||(7202934-7202974)
chr8 (3-54)||(38573433-38573485)
chr8 (57-92)||(14799979-14800014)
chr8 (18-86)||(9982643-9982711)
chr8 (16-60)||(32626023-32626068)
chr8 (19-54)||(7202885-7202921)
chr8 (18-54)||(30435329-30435365)
chr8 (57-93)||(30435350-30435386)
chr8 (57-97)||(30444963-30445003)
[»] chr6 (22 HSPs)
chr6 (1-86)||(6919714-6919800)
chr6 (18-95)||(9285644-9285722)
chr6 (1-92)||(9763079-9763171)
chr6 (18-92)||(6919792-6919866)
chr6 (1-95)||(776077-776172)
chr6 (18-96)||(9763008-9763087)
chr6 (35-95)||(34244996-34245056)
chr6 (32-95)||(8574692-8574755)
chr6 (18-95)||(29889432-29889510)
chr6 (32-92)||(8574764-8574824)
chr6 (19-94)||(13487273-13487349)
chr6 (19-86)||(15299510-15299577)
chr6 (19-92)||(28918165-28918239)
chr6 (18-92)||(776164-776239)
chr6 (18-95)||(1368474-1368552)
chr6 (3-54)||(9285716-9285768)
chr6 (21-79)||(15299412-15299471)
chr6 (52-94)||(33733430-33733472)
chr6 (19-86)||(15832472-15832540)
chr6 (59-92)||(1195351-1195384)
chr6 (32-60)||(15299474-15299502)
chr6 (18-65)||(34364770-34364818)
[»] chr7 (49 HSPs)
chr7 (1-92)||(2057395-2057487)
chr7 (1-92)||(40110804-40110897)
chr7 (1-94)||(5644744-5644838)
chr7 (1-94)||(29065886-29065980)
chr7 (1-92)||(44915195-44915287)
chr7 (1-95)||(34388332-34388427)
chr7 (18-92)||(40110737-40110812)
chr7 (3-97)||(46482015-46482109)
chr7 (18-94)||(26162121-26162198)
chr7 (1-92)||(40854036-40854129)
chr7 (18-97)||(5644672-5644752)
chr7 (18-97)||(28539152-28539232)
chr7 (32-92)||(43955517-43955577)
chr7 (32-99)||(2057494-2057561)
chr7 (18-92)||(29065819-29065894)
chr7 (18-92)||(31632722-31632797)
chr7 (35-97)||(6498767-6498829)
chr7 (32-86)||(43955613-43955667)
chr7 (24-95)||(34398938-34399011)
chr7 (18-97)||(35776939-35777019)
chr7 (1-92)||(49052786-49052877)
chr7 (3-92)||(21635885-21635975)
chr7 (35-94)||(35455802-35455861)
chr7 (18-92)||(39342626-39342701)
chr7 (35-97)||(14603264-14603326)
chr7 (18-95)||(23455231-23455309)
chr7 (18-86)||(21635969-21636038)
chr7 (18-94)||(23548595-23548672)
chr7 (35-91)||(9784933-9784989)
chr7 (18-92)||(29639199-29639274)
chr7 (19-92)||(25189211-25189285)
chr7 (1-95)||(46069458-46069550)
chr7 (35-92)||(30524255-30524312)
chr7 (18-62)||(46069421-46069466)
chr7 (18-93)||(18789230-18789306)
chr7 (35-83)||(22351874-22351922)
chr7 (38-86)||(30629063-30629111)
chr7 (18-92)||(34388265-34388340)
chr7 (19-72)||(22391572-22391626)
chr7 (57-95)||(40853984-40854022)
chr7 (21-66)||(43791116-43791162)
chr7 (18-86)||(49052869-49052935)
chr7 (57-97)||(13815000-13815040)
chr7 (45-92)||(29195709-29195756)
chr7 (57-92)||(31913236-31913271)
chr7 (57-91)||(30587909-30587943)
chr7 (27-97)||(46481941-46482011)
chr7 (21-54)||(31913256-31913289)
chr7 (61-94)||(31913309-31913342)
[»] scaffold0318 (1 HSPs)
scaffold0318 (18-96)||(2863-2941)
[»] scaffold0009 (2 HSPs)
scaffold0009 (18-94)||(41995-42072)
scaffold0009 (35-92)||(42080-42137)
[»] scaffold0048 (1 HSPs)
scaffold0048 (18-86)||(82949-83018)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-62)||(56304-56366)
scaffold0044 (18-86)||(56358-56427)
[»] scaffold0169 (1 HSPs)
scaffold0169 (18-92)||(4075-4150)
[»] scaffold0400 (1 HSPs)
scaffold0400 (29-91)||(4508-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (29-91)||(5152-5214)
[»] scaffold0129 (2 HSPs)
scaffold0129 (18-86)||(19204-19272)
scaffold0129 (19-86)||(19784-19851)
[»] scaffold0301 (1 HSPs)
scaffold0301 (35-86)||(7157-7208)
[»] scaffold0027 (1 HSPs)
scaffold0027 (18-91)||(10887-10961)
[»] scaffold0240 (1 HSPs)
scaffold0240 (57-95)||(17605-17643)
[»] scaffold0039 (1 HSPs)
scaffold0039 (57-94)||(109047-109084)
[»] scaffold0337 (1 HSPs)
scaffold0337 (18-92)||(15864-15936)
[»] scaffold0065 (1 HSPs)
scaffold0065 (18-92)||(2906-2978)


Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 90 - 353
Target Start/End: Original strand, 31188003 - 31188267
Alignment:
Q  90 tctaagagaagattctattgagaactggtcattagagatgccactcagagcaattgagtctgatcctagaagatcggatggagggatcatgaagacctgc 189  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31188003 tctaagagaagattctattgagaactggtcattatagacgccacttagagcaattgagtccgatcctagaagatcggatggagggatcatgaagacctgc 31188102  T
Q  190 attattggagaagaaaatgtgtgtcttgtatggttttcctatataactagaactagagcnnnnnnntatcaagaattcc-ttttttggcatttacatgat 288  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||||||    
T  31188103 attattggagaagaaaatgcgtctcttgtatggttttcctatataactagaactagagcaaaaaaatatcaagaattcctttttttggcatttacatgat 31188202  T
Q  289 ccaaaacgcctccgcaaagaggaaaatatcatctgcaaaatgcaaataagacaatcttggccaca 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31188203 ccaaaacgcctccgcaaagaggaaaatatcatctgcaaaatgcaaataagacaatcttggccaca 31188267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 857306 - 857405
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  857306 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactctaagagaa 857405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 49111382 - 49111473
Alignment:
Q  4 gaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49111382 gaattctattgtttgaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 49111473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 28845938 - 28846032
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||    
T  28845938 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacacactctaa 28846032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7352879 - 7352971
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  7352879 ggtgaattctattgtttgaattcaattcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 7352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 11041059 - 11040963
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  11041059 ggtgaattctattgtttggattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaatatt-ccccatccaaacacactctaagag 11040963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 41498557 - 41498649
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  41498557 ggtgaattctattgtttaaattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactct 41498649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 15660267 - 15660345
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  15660267 gaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctaag 15660345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 36455982 - 36455905
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  36455982 gaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactctaa 36455905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 31473923 - 31473847
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  31473923 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactctaa 31473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 15660273 - 15660178
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    ||||||||||||||||||| || |||||| || ||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||| ||||    
T  15660273 tgaattctattgtttgaatccatctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactcttagag 15660178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 1112679 - 1112605
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactct 1112605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 1112706 - 1112784
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||| ||||||||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||||    
T  1112706 gaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactctaag 1112784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 4896716 - 4896798
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| | ||||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactattagagaa 4896798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 7352875 - 7352809
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  7352875 aaatagttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacacactttaag 7352809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 10128058 - 10128136
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  10128058 gaattcatctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactctaag 10128136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 14982354 - 14982276
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  14982354 aattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaaga 14982276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42844610 - 42844707
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    ||||||||||||||||||||| ||| ||||| || |||| |||||||||||||||||||| |||||||| ||| ||||||||||||| ||| ||||||    
T  42844610 ggtgaattctattgtttgaatccacttcaaaataattgatttccctcaaaacattacattacctcaaaatatttccccatccaaacacactataagag 42844707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 10128064 - 10127980
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||| | |||||| |||||||||||||||||    
T  10128064 tgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacttcaaaatattcccccatccaaaca 10127980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 10633106 - 10633038
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10633106 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaaca 10633038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 1539715 - 1539649
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 84  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1539715 aattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 2125932 - 2125854
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| |||| || |||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  2125932 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactctaag 2125854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 4896711 - 4896645
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  4896711 aaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactctaag 4896645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26251001 - 26250915
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||| ||||||| ||||||||| || ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||    
T  26251001 ggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaatattccctcatccaaaca 26250915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 1107144 - 1107051
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccc-tcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| | |||| ||| || |||||||||| |||||    
T  1107144 ggtgaattctattgtttgaattcatctcaaagtagttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacactct 1107051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 4441395 - 4441338
Alignment:
Q  34 gttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactc 91  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  4441395 gttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 11348338 - 11348399
Alignment:
Q  34 gttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||    
T  11348338 gttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactctaag 11348399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 28845946 - 28845877
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  28845946 gaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaacattcctccatccaaaca 28845877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 36456010 - 36456091
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagaga 98  Q
    |||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  36456010 gaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactcttagaga 36456091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 42844618 - 42844555
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatc 80  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  42844618 gaattcacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatc 42844555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 1107151 - 1107213
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||| | |||||||    
T  1107151 tagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaatacactctaa 1107213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 16516225 - 16516164
Alignment:
Q  38 aattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  16516225 aattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactctaaaagaa 16516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 35470197 - 35470119
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| |||| || |||||||||||||||||| ||||||||||||||||||| | ||||| ||||| ||||||||    
T  35470197 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactctaag 35470119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 467879 - 467962
Alignment:
Q  10 tattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||| ||||| | |||||||||| ||||||||||||||||| |||||||||| | ||||||||||| |||||||    
T  467879 tattgtttgaattcacttcaaagtggttgaattcc-tcaaaacattacattccatcaaaacatt-ctccatccaaacacactctaa 467962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 4441396 - 4441449
Alignment:
Q  2 gtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  4441396 gtgaattctattgtttgaattcacctcaaagtagttgaatttcctcaaaacatt 4441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 31742874 - 31742923
Alignment:
Q  43 cctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacactct 31742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 5715801 - 5715741
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||| |||||||||||||||||  |||||||||||||| |||||||||| ||||||||    
T  5715801 ttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactctaag 5715741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 55266860 - 55266936
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||| ||| ||||||||||||||||||| |||| ||| |||||||||||||  ||||||||||| |||||||    
T  55266860 aattcaccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactctaa 55266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 42542979 - 42543020
Alignment:
Q  45 tcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaaca 42543020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 857314 - 857266
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctca 65  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  857314 gaattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 41498565 - 41498487
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaa-cattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||| ||| | ||||||||||||||||| |||||  ||| ||||||||| ||||||||||||||| |||||||    
T  41498565 gaattcaccttaaagtggttgaattccctcaaaaacattattttctctcaaaacaatcccccatccaaacacactctaa 41498487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 26251015 - 26251052
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||||||||||||||||| |||||||    
T  26251015 attccctcaaaacattcccccatccaaacacactctaa 26251052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 31742839 - 31742782
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||| ||||||||||||||||||||||| | ||| |||| ||||| |||||||||||    
T  31742839 aaataattgaattccctcaaaacattacactaccttaaaatattcctccatccaaaca 31742782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 29091212 - 29091164
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctca 65  Q
    |||||||| ||||| || |||||||||||||||||||||||||||||||    
T  29091212 gaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 9451148 - 9451203
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaact 90  Q
    ||||| || |||||||||||||||| ||| ||||||||||  ||||||||||||||    
T  9451148 ttgaactctctcaaaacattacattaccttaaaacattccttcatccaaacaaact 9451203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 31947666 - 31947590
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattaca---ttccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||  || ||||||||||||  |||||||||   |||||||||||||||| |||||||||||| |||||    
T  31947666 gaattcacctcag-tatttgaattccctcgtaacattacaatattccctcaaaacattctcccatccaaacatactct 31947590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 96
Target Start/End: Original strand, 53760810 - 53760849
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  53760810 attccctcaaaacattcccccattcaaacacactctaaga 53760849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14982347 - 14982396
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaa 50  Q
    |||||||| |||| ||||||||||||||||| |||||||||||||||||||    
T  14982347 ggtgaattttatt-tttgaattcacctcaaagtagttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 36455974 - 36456004
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  36455974 ggtgaattctattgtttgaattcacctcaaa 36456004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 42775658 - 42775620
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  42775658 attccctcaaaacattcccccatccaaacacactttaag 42775620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 46724195 - 46724241
Alignment:
Q  5 aattctattgtttgaattcacctc-aaatagttgaattccctcaaaa 50  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  46724195 aattctattgtttgaatccacctcaaaataattgaattccctcaaaa 46724241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 12169081 - 12169037
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcc 74  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||    
T  12169081 aaatagttgaatttc-tcaaaacattactttccctcaaaacattcc 12169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 19461752 - 19461801
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 84  Q
    |||||||| |||||||||||||||| | |||||| ||| |||||||||||    
T  19461752 ttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaa 19461801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 26250993 - 26251030
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26250993 gaattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 10354417 - 10354361
Alignment:
Q  18 gaattcacctc-aaatagttgaattccctcaaaacattacattccctcaaaacattc 73  Q
    ||||||||||| ||||| || ||||  |||||||||||||||| |||||||||||||    
T  10354417 gaattcacctccaaatatttcaattttctcaaaacattacattacctcaaaacattc 10354361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 41139548 - 41139475
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||| || ||||||| ||||||||||||||||| ||||||| |  | ||||||||||||| |||||    
T  41139548 gaattcacctaaaagtatttgaatttcctcaaaacattacattacctcaaagc--ttccccatccaaacacactct 41139475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 47108353 - 47108317
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactcta 93  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  47108353 attccctcaaaacattccctcatccaaacacactcta 47108317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 8e-40; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15034726 - 15034821
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15034726 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaag 15034821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23536159 - 23536067
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23536159 ggtgaattatattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 23536067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 30190206 - 30190298
Alignment:
Q  4 gaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30190206 gaattctattgtttgaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactctaag 30190298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4038167 - 4038075
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  4038167 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactct 4038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 27804355 - 27804271
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27804355 tgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaaca 27804271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 40264099 - 40264194
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||    
T  40264099 tgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactataagag 40264194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 34756502 - 34756424
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  34756502 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctctaag 34756424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27935552 - 27935644
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||| | ||||||||||| |||||    
T  27935552 ggtgaattctattgtttgaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactct 27935644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 24273218 - 24273297
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  24273218 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactctaaga 24273297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 50005146 - 50005241
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||| ||||    
T  50005146 ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactataag 50005241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28745863 - 28745949
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||    
T  28745863 ggtgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaatattacattcccttaaaatattctctcatccaaaca 28745949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 4038159 - 4038238
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||    
T  4038159 gaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactctaaga 4038238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 15034734 - 15034659
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  15034734 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 15034659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32572989 - 32573072
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaat-agttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 83  Q
    ||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  32572989 ggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaacattacattacctcaaaatattcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 29446824 - 29446750
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||| |||||    
T  29446824 gaattcaccttaaatagttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactct 29446750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34756494 - 34756580
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||| |||||||| ||| |||||||||||||    
T  34756494 ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattatattacctcaaaatatttccccatccaaaca 34756580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 45565457 - 45565391
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||    
T  45565457 aaatagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacaccctaag 45565391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 44410386 - 44410306
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  44410386 gaattcacctcaaaatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacactctaagag 44410306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 26501077 - 26501152
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  26501077 gaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 26501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 28745871 - 28745805
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 84  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  28745871 gaattcaccttaaataattgaattccctcaaaccattacattccctcaaaatattcccccatccaaa 28745805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 6470702 - 6470761
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  6470702 ttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactctaa 6470761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 8224843 - 8224768
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||| ||||| || || |||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  8224843 gaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 8224768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38277482 - 38277576
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||| |||||||| ||| ||||||||| || ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| ||||    
T  38277482 ggtgaattatattgtttaaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatt-ccccatccaaacacactataag 38277576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 38277489 - 38277415
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| | |||||||||| |||||    
T  38277489 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactct 38277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 37036959 - 37037016
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  37036959 aaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaaca 37037016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37214911 - 37214842
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaac 69  Q
    ||||||||||||||||||||| ||||||||| || |||||||| |||||||||||||||| |||||||||    
T  37214911 ggtgaattctattgtttgaatccacctcaaaataattgaattctctcaaaacattacattacctcaaaac 37214842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 47165210 - 47165287
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||| ||| || ||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||    
T  47165210 gaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactctaa 47165287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 28632584 - 28632652
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||   |||||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  28632584 gaattcacctcaaagtattgaattctctcaaaacattacattccctccaaacattccctcatccaaaca 28632652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 44410378 - 44410470
Alignment:
Q  1 ggtgaattctattgtttgaattcac-ctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||| ||||| ||| |  ||||| ||||||||||||||||| ||||||| |||||||| ||||||| ||||||||| |||||    
T  44410378 ggtgaattctattgtctgaatccactcaaaaataattgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactct 44410470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 43622977 - 43623051
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||| || || ||||  |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  43622977 aattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactct 43623051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 44570753 - 44570687
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 83  Q
    |||||||||||||  || ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  44570753 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45565461 - 45565515
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  45565461 ggtgaattctattgtttaaattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 32287949 - 32288006
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  32287949 ttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactct 32288006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 27804364 - 27804424
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||| || |||||||||||| |||||||||||||| ||||||||||| |||||    
T  27804364 tagttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactct 27804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 50005154 - 50005079
Alignment:
Q  18 gaattcacctcaaata-gttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| | ||||||||| ||||||||||||||||| ||||||| |||||  |||||||||| |||||    
T  50005154 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactct 50005079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37448399 - 37448465
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 83  Q
    |||||||| ||||| || || ||||||||||||||||||||||| |||||||||||||| |||||||    
T  37448399 gaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 25889243 - 25889155
Alignment:
Q  7 ttctattgtttgaattcacctc-aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||| |||||| ||||| ||||||||| ||||||||||| ||| |||||||| |||||| ||||| || | ||||||||    
T  25889243 ttctattgtttgaatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaatattccctcatcccaatacactctaag 25889155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 37447900 - 37447968
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaac 85  Q
    |||||||||||||  || ||||||||| |||||||||||||||||||| ||| ||||||| ||||||||    
T  37447900 gaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 51847926 - 51847858
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||| || || ||||||| | | ||||||||||||| |||||||||||||| |||||||||||    
T  51847926 gaattcacctaaagtatttgaatttctttaaaacattacattacctcaaaacattcctccatccaaaca 51847858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 31166373 - 31166310
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||| ||| ||||| |||||||||||||||  |||||||||||||| |||||||||| |||||    
T  31166373 aaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactct 31166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 49659291 - 49659217
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| || || |||||||||  |||||||||||||||||| ||||| ||||||||||||| |||||    
T  49659291 gaattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacatt-ccccatccaaacacactct 49659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5474491 - 5474437
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||||||||||| ||||| || || |||||||||||||||||    
T  5474491 ggtgaattctattgtttgaattcacttcaaagtaattaaattccctcaaaacatt 5474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 32572975 - 32572937
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  32572975 attccctcaaaacattcccccatccaaacacactctaag 32572937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 47074223 - 47074177
Alignment:
Q  5 aattctattgtttgaattcacctcaaa-tagttgaattccctcaaaa 50  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  47074223 aattctattgtttgaattcacctcaaagtagttgaattccttcaaaa 47074177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 48953622 - 48953580
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  48953622 attccttcaaaacattcccccatccaaacacactctaagagaa 48953580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 5474483 - 5474528
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccc 62  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||    
T  5474483 gaattcaccttaaagtagttgaattccctcaaaacattacattccc 5474528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 5474457 - 5474417
Alignment:
Q  52 attacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  5474457 attaaattccctcaaaacattcccccatccaaacacactct 5474417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 17502270 - 17502222
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaa 50  Q
    ||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  17502270 tgaattctattatttgaattcacctcaaagtagttgaattctctcaaaa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 23536173 - 23536213
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  23536173 attccctcaaaacattcccccatccaaacacattctaagag 23536213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 37214903 - 37214939
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacatt 54  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37214903 gaattcacctcaagtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 92
Target Start/End: Complemental strand, 15245495 - 15245460
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||||||||| |||||    
T  15245495 attccctcaaaacattcccccatccaaacacactct 15245460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 31195531 - 31195468
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatc 80  Q
    |||||||||||||| || || |||| ||||| |||||||||||||||||||| ||||| |||||    
T  31195531 gaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcctccatc 31195468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 946429 - 946372
Alignment:
Q  38 aattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    ||||||||||||||| |||||||||||||| ||||  | |||||||||| |||||||||    
T  946429 aattccctcaaaacaatacattccctcaaagcatt-tctcatccaaacacactctaaga 946372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 946988 - 946930
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattccc 75  Q
    |||||||||||| | || ||||||| |||||||| | ||||||||||||||||||||||    
T  946988 gaattcacctcatagtatttgaatttcctcaaaataatacattccctcaaaacattccc 946930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 10166573 - 10166499
Alignment:
Q  19 aattcacctcaa-atagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| || ||| |||| |||| ||||||||||||||| || |||||||||| | |||||||||| |||||    
T  10166573 aattcacctaaatatatttgagttccttcaaaacattacattaccacaaaacattctctcatccaaacacactct 10166499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 37214924 - 37214962
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  37214924 attccctcaaaacattctcccatccaaacacactctaag 37214962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 52280972 - 52281010
Alignment:
Q  38 aattccctcaaaacattacattccctcaaaacattcccc 76  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  52280972 aattccctcaaaacattactttccctcaaaagattcccc 52281010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 32128083 - 32128046
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  32128083 attccctcaaaacattcccccatctaaacacactctaa 32128046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 32572997 - 32572960
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    |||||||||||||| |||||||||||||||||||||||    
T  32572997 gaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 32652261 - 32652205
Alignment:
Q  37 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactcta 93  Q
    ||||| |||||||||| |||||| |||||||||||| | ||||||||| | ||||||    
T  32652261 gaatttcctcaaaacaatacatttcctcaaaacatttctccatccaaatacactcta 32652205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 48953643 - 48953607
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacatt 54  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  48953643 gaattcacctcaaatatttgaattccttcaaaacatt 48953607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 44692889 - 44692981
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  44692889 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 44692981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28092306 - 28092207
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  28092306 ggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactctaagagaa 28092207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 9129413 - 9129503
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  9129413 tgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 9129503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 9137520 - 9137610
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  9137520 tgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 9137610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 27251963 - 27252053
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  27251963 tgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactct 27252053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 46672800 - 46672877
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46672800 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 46672877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5415875 - 5415783
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||| | |||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  5415875 ggtgaattctattgtttgtactcaccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactct 5415783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 39110485 - 39110390
Alignment:
Q  2 gtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||| |  |||||||||| |||||||||    
T  39110485 gtgaattctattgtttgaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactctaaga 39110390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 46429463 - 46429558
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||| |||||||| |||||| |||||||||| ||||||||    
T  46429463 ggtgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactctaag 46429558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31070473 - 31070570
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| |||| || || |||||| ||||||||||    
T  31070473 ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattctccaattcaaacatactctaagag 31070570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 44436321 - 44436258
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44436321 aaatagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 44436258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 47284293 - 47284388
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||| |||||||| |||| | |||||||||| ||||||||    
T  47284293 ggtgaattctattgtttgaatcaacctcaaaataattgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactctaag 47284388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 49457418 - 49457343
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49457418 gaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49457343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 36397986 - 36398064
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  36397986 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactctaag 36398064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 44692897 - 44692819
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  44692897 gaattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactctaag 44692819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 21307529 - 21307598
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21307529 gaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaaca 21307598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 47767506 - 47767429
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47767506 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactctaag 47767429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 31070481 - 31070422
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccc 76  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31070481 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccc 31070422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44436325 - 44436384
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacatt 59  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44436325 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 37054468 - 37054390
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    ||||||||||||  || ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  37054468 aattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactctaaga 37054390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 5415867 - 5415942
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||| |||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  5415867 gaattcaccttaaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 42005971 - 42006025
Alignment:
Q  38 aattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  42005971 aattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 42006025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 35279920 - 35279968
Alignment:
Q  38 aattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaaca 35279968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 19475891 - 19475824
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 84  Q
    |||||||||||||| || ||||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  19475891 gaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 34088646 - 34088571
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| |||| || |||||||||||||||||| ||||||||||||||||||| | ||||||||||| |||||    
T  34088646 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactct 34088571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 53129840 - 53129915
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| |||| || ||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||    
T  53129840 gaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactct 53129915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 48947680 - 48947602
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| |||| || |||||||| ||||||||| ||||||||||||||||||||  ||||||||||| ||||||||    
T  48947680 gaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactctaag 48947602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 53470427 - 53470505
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||| |||| || |||||||||||||||||| || |||||||||||||||| || |||||||||| |||||||||    
T  53470427 aattcaccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactctaaga 53470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 37321625 - 37321548
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||| ||| |||||||||| |||||||||||||| || |||||||| ||||||||||||||| | |||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactctaa 37321548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 671635 - 671683
Alignment:
Q  36 tgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 84  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  671635 tgaattccctcaaaacaatacattccctcaaaacattcccctatccaaa 671683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 7302402 - 7302346
Alignment:
Q  36 tgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||||| |||||    
T  7302402 tgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactct 7302346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 9129404 - 9129344
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||| |||||||||||||||||||||||| | || |||||||||||| |||||    
T  9129404 tagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactct 9129344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 9137511 - 9137451
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||| |||||||||||||||||||||||| | || |||||||||||| |||||    
T  9137511 tagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactct 9137451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 332067 - 332012
Alignment:
Q  1 ggtgaattctattgttt-gaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  332067 ggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 39215905 - 39216000
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||| |||||||||||| ||||||||| || |||||||  |||||||||||| ||| |||||||| |||| | |||||||||| ||| ||||    
T  39215905 ggtgaattttattgtttgaatccacctcaaaataattgaattttctcaaaacattatattacctcaaaatattctctcatccaaacacactataag 39216000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 30767161 - 30767099
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    ||||||||| ||| ||||||| |||||||||||||||| ||||||||||| | ||||||||||    
T  30767161 ttgaattccttcataacattagattccctcaaaacattaccccatccaaatacactctaagag 30767099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42130784 - 42130698
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaa-atagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||| | ||||||| ||| | || ||| ||||||||||||||||||||||||  |||||||| ||||||||| |||||||    
T  42130784 ggtgaattctactctttgaatccacttaaagataattgaattccctcaaaacattacatcacctcaaaatattcccccacccaaaca 42130698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 30766628 - 30766571
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcc 74  Q
    |||||||||||||  || ||||||||| ||||||||||||||||||||||||||||||    
T  30766628 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 25655387 - 25655335
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||||||||    
T  25655387 tgaattctattatttgaattcaactcaaagtagttgaattccctcaaaacatt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 31189395 - 31189471
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||| |||||||| || |||||||| |||||||||||||||| ||||||||||||| | ||| |||||| |||||||    
T  31189395 aatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactctaa 31189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 44288474 - 44288534
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| ||||||||||| ||| |||||||||||||| ||||||||||| ||| ||||    
T  44288474 ttgaattccatcaaaacattatattacctcaaaacattcctccatccaaacatactataag 44288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 46001420 - 46001364
Alignment:
Q  36 tgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||| |||||||||||| |||||||| ||||| ||||||||||| |||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactct 46001364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 46429449 - 46429409
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  46429449 attccctcaaaacattcccccatccaaacacactctaagag 46429409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 21730975 - 21730902
Alignment:
Q  19 aattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||| |||||||| ||||||||| ||||||||||||||  ||| |  |||||||| |||||||||| |||||    
T  21730975 aattcatctcaaatatttgaattccttcaaaacattacataaccttaggacattccctcatccaaacacactct 21730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 52527111 - 52527042
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||| |||||||| || |||||||||  || |||||||||| || ||||||||||||||||||||||||    
T  52527111 gaatttacctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaaca 52527042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 46635914 - 46635855
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||| |||||||||||||||||  |||||||||||  | |||||||||| |||||||    
T  46635914 ttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacactctaa 46635855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 2732683 - 2732637
Alignment:
Q  48 aaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||| ||| |||||||||||| ||||||||||||| |||||||    
T  2732683 aaacattatattacctcaaaacatttccccatccaaacacactctaa 2732637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 25655350 - 25655312
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  25655350 attccctcaaaacatttccccatccaaacacactctaag 25655312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 86
Target Start/End: Complemental strand, 27485507 - 27485478
Alignment:
Q  57 attccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||||||||||||    
T  27485507 attccctcaaaacattcccccatccaaaca 27485478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 7976623 - 7976567
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattc 73  Q
    |||||||||||||  || || |||||| ||||||||||||||||| |||||||||||    
T  7976623 gaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattc 7976567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 40929676 - 40929704
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa 31  Q
    |||||||||||||||||||||||||||||    
T  40929676 tgaattctattgtttgaattcacctcaaa 40929704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 50168633 - 50168665
Alignment:
Q  43 cctcaaaacattacattccctcaaaacattccc 75  Q
    ||||||||||||||||| |||||||||||||||    
T  50168633 cctcaaaacattacattacctcaaaacattccc 50168665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14537291 - 14537199
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14537291 ggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 14537199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11716500 - 11716405
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  11716500 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactctaag 11716405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14365793 - 14365700
Alignment:
Q  1 ggtgaattctattgttt-gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14365793 ggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 14365700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 41461599 - 41461679
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41461599 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaagag 41461679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 27033565 - 27033490
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  27033565 gaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactct 27033490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 784885 - 784793
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||   ||||||||||| |||||    
T  784885 ggtgaattctattgtttgaattcaactcaaagtagttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacacactct 784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 14365798 - 14365861
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  14365798 tagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaag 14365861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 17180360 - 17180297
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  17180360 aaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 17180297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41461607 - 41461508
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    ||||||||||||||||||||| ||||||||| || || |||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| | ||||||    
T  41461607 ggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactattagagaa 41461508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 1583807 - 1583889
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    ||||||||| |||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  1583807 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctaagagaa 1583889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 784877 - 784954
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||    
T  784877 gaattcaccttaaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactctaa 784954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 10480194 - 10480119
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| || ||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  10480194 gaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 10480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 11684656 - 11684605
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11684656 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 11684605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 13017854 - 13017772
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    |||||||||||||| || ||||||||||| |||| ||||||||||||||||||||| || |||||||||| ||||||||||||    
T  13017854 gaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactctaagagaa 13017772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 44256181 - 44256270
Alignment:
Q  8 tctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||| ||||||    
T  44256181 tctattgtttgaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaacacactataagag 44256270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 11532251 - 11532320
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  11532251 gaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaaca 11532320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 11793970 - 11793901
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  11793970 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaaca 11793901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 769111 - 769036
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| |||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  769111 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 33189255 - 33189330
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| |||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  33189255 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 33189330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 11141379 - 11141305
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||| |||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  11141379 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 11141305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11684657 - 11684711
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11684657 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 30698355 - 30698289
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 84  Q
    ||||||||||||  || ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30698355 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 35047677 - 35047755
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| |||| || ||||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  35047677 gaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactctaag 35047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 39630299 - 39630225
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| | |||| |||||| |||||    
T  39630299 gaattcccctcaaatatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactct 39630225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 10244237 - 10244174
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||||||||| |||||||| || |||| |||||||||||| ||||||||    
T  10244237 tagttgaattccctcaaaacattactttccctcagaatattctcccatccaaacacactctaag 10244174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 28740653 - 28740602
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  28740653 ttgaattccctcaaaacattacattccctcaaaacatttccccattcaaaca 28740602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 45094484 - 45094546
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||| |||||| |||||||    
T  45094484 tagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacactctaa 45094546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 3092339 - 3092275
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||||||| | ||||| ||||||    
T  3092339 ttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaatacactcttagagaa 3092275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 17905729 - 17905654
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| || ||||||||| | |||||||||||||| |||||||||||||| ||||| |||| |||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactct 17905654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 7228031 - 7228085
Alignment:
Q  38 aattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  7228031 aattccttcaaaacattacattctctcaaaacatttccccatccaaacacactct 7228085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11824772 - 11824718
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  11824772 ggtgaattatattgtttgaattcatctcaaagtagttgaattccctcaaaacatt 11824718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14954359 - 14954266
Alignment:
Q  1 ggtgaattctattgttt-gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||| ||||| || | ||| ||||||||||| || |||| ||||||||| ||||||||||||| | ||||||||| |||||    
T  14954359 ggtgaattctattgttttgaatttactttaaagtagttgaattctcttaaaagattacattcactcaaaacattcctctatccaaacacactct 14954266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 3345816 - 3345867
Alignment:
Q  5 aattctattgtttgaattcacctcaaa-ta-gttgaattccctcaaaacatt 54  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  3345816 aattctattgtttgaattcacctcaaagtacgttgaattccctcaaaacatt 3345867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10244244 - 10244298
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||| ||||||||    
T  10244244 ggtgaattttattgtttgaactcacctcaaagtagttgaattcccttaaaacatt 10244298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 14537305 - 14537343
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  14537305 attccctcaaaacattcccccatccaaacacactctaag 14537343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 8735914 - 8735841
Alignment:
Q  23 cacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| || ||||||||||||  ||||||| |||||||||||||||   |||||||||||| ||||||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacacactctaag 8735841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 30751345 - 30751418
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactc 91  Q
    ||||||| || ||||| || ||||| ||||||||||||||||  |||||||||||| | |||||||||| ||||    
T  30751345 gaattcatcttaaatatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacactc 30751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 40026139 - 40026070
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||| || || |||| ||||||||||||| ||| |||||||| |||||||||| ||||||    
T  40026139 gaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 7167666 - 7167714
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaa 66  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  7167666 aattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 21504503 - 21504463
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  21504503 attccctcaaaacattccccgatccaaacacactctaagag 21504463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 32839646 - 32839694
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctca 65  Q
    |||||||| ||||| || |||||||||||||||||||||||||||||||    
T  32839646 gaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 29279035 - 29279090
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaact 90  Q
    |||||||  ||| |||||||||||| ||||||||||||||  ||||||||||||||    
T  29279035 ttgaattatctcgaaacattacattacctcaaaacattccttcatccaaacaaact 29279090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 8736461 - 8736499
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  8736461 attccctcaaaacattccctcatccaaacacactctaag 8736499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 11606787 - 11606717
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaa 88  Q
    ||||||||||||| || ||| ||||| | |||| |||||||||| ||||||||||||| ||||| ||||||    
T  11606787 aattcacctcaaagtatttgtattccttgaaaatattacattccttcaaaacattccctcatcctaacaaa 11606717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 11824786 - 11824824
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  11824786 attccctcaaaacattcccccatccaaacacactttaag 11824824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 14954351 - 14954393
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacatt 59  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  14954351 gaattcaccttaaagtagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27033557 - 27033607
Alignment:
Q  1 ggtgaattctattgtttgaattcacctc-aaatagttgaattccctcaaaa 50  Q
    ||||||||||||||||||||| |||||| ||| | ||||||||||||||||    
T  27033557 ggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaa 27033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 86
Target Start/End: Complemental strand, 3345798 - 3345769
Alignment:
Q  57 attccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||||||||||||    
T  3345798 attccctcaaaacattcccccatccaaaca 3345769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 86
Target Start/End: Original strand, 19231305 - 19231334
Alignment:
Q  57 attccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||||||||||||    
T  19231305 attccctcaaaacattcccccatccaaaca 19231334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 39477976 - 39478016
Alignment:
Q  46 caaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||| ||||||||||||| | ||||||||||    
T  39477976 caaaacattacattacctcaaaacattctcacatccaaaca 39478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 472 - 567
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  472 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactataag 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 465 - 405
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||    
T  465 tagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2121 - 2026
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  2121 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactataag 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 2128 - 2188
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||    
T  2128 tagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 2188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9764405 - 9764500
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  9764405 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactctaag 9764500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15374052 - 15373956
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||    
T  15374052 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactctaaga 15373956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20523225 - 20523131
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||||||||||| |||||||    
T  20523225 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacactctaa 20523131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 40643902 - 40643976
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40643902 gaattcaccttaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 40643976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 2316446 - 2316539
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||   ||||||||||| |||||||    
T  2316446 ggtgaattctattgtttgaattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaacatt-ttccatccaaacacactctaa 2316539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 32390039 - 32390136
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |  ||||||||| ||||| ||||    
T  32390039 ggtgaattctattatttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactcttagag 32390136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6634106 - 6634010
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| ||||    
T  6634106 ggtgaattctattgtttgaattcactcgaaataattgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactcttagag 6634010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 40809433 - 40809341
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||    
T  40809433 ggtgaattttattgtttgaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactct 40809341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 2721557 - 2721624
Alignment:
Q  20 attcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 2721624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 28828417 - 28828512
Alignment:
Q  4 gaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagaga 98  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |||||||    
T  28828417 gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactataagaga 28828512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 15804400 - 15804322
Alignment:
Q  15 tttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  15804400 tttgaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 37722889 - 37722967
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  37722889 gaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactctaag 37722967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 26281264 - 26281341
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  26281264 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactctaa 26281341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 15374059 - 15374119
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15374059 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3563352 - 3563278
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactc 91  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  3563352 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16515096 - 16515011
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaata-gttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||||| |||||||||||||| | |||||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  16515096 ggtgaattctattgttagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacatt-ctccatccaaaca 16515011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 20523217 - 20523291
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactc 91  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  20523217 gaattcaccttaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 22303866 - 22303943
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22303866 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactctaag 22303943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 22767027 - 22766950
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  22767027 gaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactctaa 22766950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 2316438 - 2316378
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  2316438 tagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactct 2316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 9764413 - 9764338
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  9764413 gaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 9764338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 25935285 - 25935360
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| || ||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  25935285 gaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactct 25935360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 40090409 - 40090484
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  40090409 gaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactct 40090484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 23092031 - 23092121
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||| | |||||||| || ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  23092031 tgaattctattttctgaattcatctgaaagtagttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactct 23092121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 28828422 - 28828373
Alignment:
Q  37 gaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 28828373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 16515102 - 16515182
Alignment:
Q  18 gaattcacctcaaata-gttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| | |||||||||| ||||| ||||    
T  16515102 gaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactcttagag 16515182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 19533903 - 19533971
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  19533903 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaaca 19533971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 32470953 - 32471042
Alignment:
Q  5 aattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||  || ||| || |||||||||| ||||||||    
T  32470953 aattctattatttgaattcaactcaaagtagttgaattccctcaaaacattacattccctc--aagatttccacatccaaacacactctaag 32471042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 927377 - 927302
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| |||| || |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  927377 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactct 927302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 37145497 - 37145564
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaac 85  Q
    ||||||||||||| || |||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  37145497 aattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaac 37145564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 41762210 - 41762285
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| |||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  41762210 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 41762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 9894317 - 9894386
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||| || |||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  9894317 gaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaaca 9894386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 15804399 - 15804460
Alignment:
Q  38 aattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacactatgagagaa 15804460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 32470945 - 32470890
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 84  Q
    ||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  32470945 aaatagttgaattccttcaaaacattacattccctcaaaacatttctccatccaaa 32470890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 33245382 - 33245441
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactc 91  Q
    ||||||||||  |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  33245382 tagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactc 33245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 32390032 - 32389978
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  32390032 tagttgaattccctcaaaatattacattccttcaaaacattccctcatccaaaca 32389978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 34982273 - 34982216
Alignment:
Q  34 gttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  34982273 gttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactct 34982216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 13243514 - 13243469
Alignment:
Q  37 gaattccctcaaaacattacattccctcaaaacattcccccatcca 82  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatcca 13243469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 32250111 - 32250167
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  32250111 ttgaattccctcaaaacattactttccctcaaaacatt-ccccatccaaacacactct 32250167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 40809426 - 40809503
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| ||| ||| ||||||| ||||||||||||||||| ||||||||||| ||||||| ||||| ||||||||    
T  40809426 aattcaccttaaagtagctgaattcactcaaaacattacattctctcaaaacatttccccatctaaacacactctaag 40809503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 23092022 - 23091960
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||||||| ||||| ||||||||    
T  23092022 tagttgaattccttcaaaacattacattccctcaaaatatt-ccccatcaaaacacactctaag 23091960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 35379400 - 35379342
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||    
T  35379400 ttgaattccctcaaaacattacattatctcaaaacatt-ccccatccaaacacactctaa 35379342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40643910 - 40643856
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||||||||    
T  40643910 ggtgaattctattgtttgaatttaactcaaagtagttgaattccctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 8255100 - 8255031
Alignment:
Q  19 aattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaa 88  Q
    ||||||||| ||||| ||||||||||||||||||||||||| ||| |||  ||||| |||| ||||||||    
T  8255100 aattcacctaaaatatttgaattccctcaaaacattacattaccttaaagtattcctccattcaaacaaa 8255031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 14834898 - 14834830
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||| || ||| ||||||| |||||||||||||||||| |||||||| ||||| ||||||    
T  14834898 aattcacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaaca 14834830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 6634098 - 6634177
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||||||| |||||||| ||| | |||| ||||||||||||| |||  |||||||||||||||| || ||||||    
T  6634098 gaattcacctcaaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacacaccctaaga 6634177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 13243514 - 13243557
Alignment:
Q  43 cctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaaca 13243557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 33146096 - 33146057
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  33146096 attccctcaaaacattcccccatccaaacacactctaaga 33146057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 33146226 - 33146187
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  33146226 attccctcaaaacattcccccatccaaacacactctaaga 33146187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 22305147 - 22305105
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    |||||||||||||||||||||||||||||| ||||| ||||||    
T  22305147 attccctcaaaacattcccccatccaaacacactcttagagaa 22305105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 5658821 - 5658776
Alignment:
Q  47 aaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacactct 5658776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 92
Target Start/End: Complemental strand, 2550363 - 2550328
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||||||||| |||||    
T  2550363 attccctcaaaacattcccccatccaaacacactct 2550328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 10314712 - 10314649
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||| ||||||||||| |||| |||||||| | |||||||||| | ||||||||||| |||||    
T  10314712 aaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaacatactct 10314649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 22302574 - 22302536
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  22302574 attccctcaaaacattaccccatccaaacacactctaag 22302536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 34982313 - 34982351
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  34982313 attccctcaaaacattcctccatccaaacacactctaag 34982351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 12991333 - 12991374
Alignment:
Q  43 cctcaaaacattacattccctcaaaacattcccccatccaaa 84  Q
    |||||||||||||| || ||||||||||||||| ||||||||    
T  12991333 cctcaaaacattactttacctcaaaacattccctcatccaaa 12991374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 22305169 - 22305132
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22305169 gaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    ||||||||||||| |||||||||||||||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17110961 - 17110869
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  17110961 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 17110869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 3853691 - 3853612
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3853691 gaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactctaaga 3853612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 3858149 - 3858070
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3858149 gaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactctaaga 3858070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 30435333 - 30435252
Alignment:
Q  5 aattctattgtttgaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  30435333 aattctattgtttaaattcaactcaaatagttaaattccctccaaacattacattccctcaaaacatttctccatccaaaca 30435252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 42711362 - 42711439
Alignment:
Q  16 ttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  42711362 ttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactct 42711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3853683 - 3853769
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||| |||||||||||| |||||||| ||| |||||||||||||    
T  3853683 ggtgaattctattgtttgaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaaca 3853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3858141 - 3858227
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||| |||||||||||| |||||||| ||| |||||||||||||    
T  3858141 ggtgaattctattgtttgaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaaca 3858227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 17110953 - 17111031
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  17110953 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactctaag 17111031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 33902727 - 33902665
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  33902727 tagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaa 33902665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 13404917 - 13404833
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||| |||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  13404917 tgaattttattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaaca 13404833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 28324688 - 28324752
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  28324688 ttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactctaagagaa 28324752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 14800059 - 14800122
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  14800059 tagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactctaag 14800122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 29257359 - 29257438
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    ||||||||| |||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  29257359 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctaaga 29257438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 24045035 - 24044958
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||  || ||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  24045035 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactctaa 24044958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 40046877 - 40046804
Alignment:
Q  20 attcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 40046804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 44889429 - 44889352
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||| ||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  44889429 gaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactctaa 44889352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 13404912 - 13404976
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatcca 82  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13404912 aattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatcca 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 23011809 - 23011734
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||| |||||||| |||||    
T  23011809 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactct 23011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 33377305 - 33377380
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| |||| || |||||||||||||||||| || |||||||||||||||||||||||||||||| |||||    
T  33377305 gaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactct 33377380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 4156266 - 4156320
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  4156266 tagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaaca 4156320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33902732 - 33902825
Alignment:
Q  1 ggtgaattctattgttt-gaattcacctcaaa-tagtt-gaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||  |||||||||| |||||||||||||||| |||| |||||    
T  33902732 ggtgaattctattgttttgaattcacctcaaagtagtttgaattccctcaaaacaaaacattccctc-aaacattcccccatcccaacacactct 33902825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 37268086 - 37268168
Alignment:
Q  13 tgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||| ||||||||| || || |||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||    
T  37268086 tgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactctaa 37268168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 14991749 - 14991692
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  14991749 ttgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactct 14991692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 29482815 - 29482884
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||| |||| || |||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  29482815 gaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaaca 29482884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 44346686 - 44346755
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||| |||| || ||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  44346686 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaaca 44346755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 31807471 - 31807409
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||||    
T  31807471 aaatagttgaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 8689192 - 8689138
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||||||||||||||||||| |||||||||| | |||||||||||    
T  8689192 tagttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 33986078 - 33986004
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||| || |||||||| |||||||||||||||| | |||| ||||||||||||||||||| |||||    
T  33986078 aattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactct 33986004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 36103175 - 36103101
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||| ||||| || ||||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  36103175 aattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 36103101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14800052 - 14799999
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaatagttgaattccctcaaaacatt 54  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  14800052 ggtgaattttattgtttgaactcacctcaaatagtttaattccctcaaaacatt 14799999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 35979012 - 35979081
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||| || ||||||||||||  || ||||||||||||||||||||||| |||||||||||    
T  35979012 gaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaaca 35979081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 515541 - 515617
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||| ||||| || ||||| ||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  515541 aattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactctaa 515617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 40046872 - 40046932
Alignment:
Q  16 ttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattccc 75  Q
    |||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  40046872 ttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaacattccc 40046932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 8049328 - 8049269
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattccccc 77  Q
    |||| |||||||| || ||||||||||||||||||||| |||||||||||||||||||||    
T  8049328 aatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccccc 8049269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 32626069 - 32626124
Alignment:
Q  44 ctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactcttagagaa 32626124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 14312 - 14239
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||| |||| || ||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||||    
T  14312 aattcaccccaaagtatttgaattcccttaaaacattacattccctccaaacatt-ccccatccaaacacactct 14239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 27322687 - 27322732
Alignment:
Q  47 aaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactct 27322732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 1088297 - 1088360
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||| ||||||| |||||||||| ||||||| ||||||||||||| ||| ||||||| |||||    
T  1088297 aaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactct 1088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 11744727 - 11744802
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||| |||||||||||| ||| |||||||||||||||| ||| |||| | |||||||||| |||||    
T  11744727 gaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactct 11744802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 34008834 - 34008795
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  34008834 attccctcaaaacattcccccatccaaacacactctaaga 34008795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 29611423 - 29611385
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  29611423 attccctcaaaacattcccccatccaaacacactctaag 29611385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 7202934 - 7202974
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  7202934 attccctcaaaacattcctccatccaaacacactctaagag 7202974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 38573485 - 38573433
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||||||| || ||| |||||||||| ||||||||||||    
T  38573485 tgaattctattgtttgaattcaactaaaagtagttgaatttcctcaaaacatt 38573433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 92
Target Start/End: Complemental strand, 14800014 - 14799979
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||||||||| |||||    
T  14800014 attccctcaaaacattcccccatccaaacacactct 14799979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 9982711 - 9982643
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||| || || ||||| |||||||||||||||| ||| |||||||| | |||||||||||    
T  9982711 gaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaacatt-ctccatccaaaca 9982643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 32626068 - 32626023
Alignment:
Q  16 ttgaattcacctcaaa-tagttgaattccctcaaaacattacattc 60  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32626068 ttgaattcaccttaaagtagttgaattccctcaaaacattatattc 32626023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 30435329 - 30435365
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacatt 54  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  30435329 gaatttaccttaaatagttgaattccctcaaaacatt 30435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 30435350 - 30435386
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactcta 93  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  30435350 attccctcaaaacatttccccatccaaacacactcta 30435386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 30444963 - 30445003
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||| ||||||||||| ||||| ||||    
T  30444963 attccctcaaaacattcctccatccaaacacactcttagag 30445003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6919800 - 6919714
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  6919800 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaaca 6919714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 9285722 - 9285644
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9285722 gaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaag 9285644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9763079 - 9763171
Alignment:
Q  1 ggtgaattctattgtttgaattcacctca-aatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||    
T  9763079 ggtgaattctattgtttgaatccacctcacaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactct 9763171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 6919792 - 6919866
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  6919792 gaattcaccttaaatggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 6919866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 776172 - 776077
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||| | || ||| |||||||||| |||||||||||||||||||||||||||||| | ||||| ||||| ||||||||    
T  776172 ggtgaattctattgtttgaatttaacttaaagtagttgaatttcctcaaaacattacattccctcaaaacatttctccatctaaacacactctaag 776077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 9763087 - 9763008
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||| |||||    
T  9763087 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacacactataaga 9763008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 34244996 - 34245056
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  34244996 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaag 34245056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 8574755 - 8574692
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  8574755 tagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactctaag 8574692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 29889432 - 29889510
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||| ||||| || ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  29889432 gaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactctaag 29889510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 8574764 - 8574824
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  8574764 tagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 13487349 - 13487273
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||||||| || ||||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||    
T  13487349 aattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactctaa 13487273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 15299510 - 15299577
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacatt-ccccatccaaaca 15299577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 28918239 - 28918165
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||| || ||||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  28918239 aattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 28918165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 776164 - 776239
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||  || ||||||||| |||||    
T  776164 gaattcaccttaaagtagttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacactct 776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 1368552 - 1368474
Alignment:
Q  18 gaattcacctcaaat-agttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||  | ||||||||||| |||| ||||||||| ||||||||||||| ||||||||||| ||||||||    
T  1368552 gaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactctaag 1368474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 9285716 - 9285768
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacatt 54  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  9285716 tgaattctattgtttgaattcatctcaaagtagttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 15299471 - 15299412
Alignment:
Q  21 ttcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccat 79  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcctccat 15299412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 33733472 - 33733430
Alignment:
Q  52 attacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactctaa 33733430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 15832540 - 15832472
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||| |||| || ||||||||||| ||||||||||||||| || ||||||| || ||||||||||    
T  15832540 aattcaccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaaca 15832472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 1195384 - 1195351
Alignment:
Q  59 tccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||||||| |||||    
T  1195384 tccctcaaaacattcccccatccaaacacactct 1195351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 15299502 - 15299474
Alignment:
Q  32 tagttgaattccctcaaaacattacattc 60  Q
    |||||||||||||||||||||||||||||    
T  15299502 tagttgaattccctcaaaacattacattc 15299474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 34364818 - 34364770
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctca 65  Q
    |||||||||||||| || || |||||||||| |||||||||||||||||    
T  34364818 gaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 7e-31; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2057487 - 2057395
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  2057487 ggtgaattttattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactct 2057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40110804 - 40110897
Alignment:
Q  1 ggtgaattctattgttt-gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  40110804 ggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactct 40110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5644744 - 5644838
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||||||||||||||  ||||||||| || ||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  5644744 ggtgaattctattgtttgaacccacctcaaaataattgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactctaa 5644838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 29065886 - 29065980
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||    
T  29065886 ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactctaa 29065980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44915287 - 44915195
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||| | |||||||||| |||||    
T  44915287 ggtgaattctattgtttgaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactct 44915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 34388332 - 34388427
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||  ||| |||||| ||||||||    
T  34388332 ggtgaattccattgtttgaactcacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactctaag 34388427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 40110812 - 40110737
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40110812 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 40110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 46482015 - 46482109
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||| ||||| | |||| |||||| ||||||||||    
T  46482015 tgaattctattgtttgaattcaactcaaatagttgaattttctcaaaacattacattccttcaacacatttctccattcaaacacactctaagag 46482109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 26162121 - 26162198
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  26162121 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactctaa 26162198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40854036 - 40854129
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccc-tcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||| |||||||||||||| |||||| ||||||||||||| |||||    
T  40854036 ggtgaattctattgtttgaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaacatttccccatccaaacacactct 40854129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 5644752 - 5644672
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||||    
T  5644752 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactcttagag 5644672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 28539152 - 28539232
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    ||||||||| |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  28539152 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactctaagag 28539232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 43955577 - 43955517
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43955577 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 43955517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 2057494 - 2057561
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagagaa 99  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  2057494 tagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactctaagagaa 2057561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 29065894 - 29065819
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  29065894 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 29065819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 31632797 - 31632722
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  31632797 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 6498767 - 6498829
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  6498767 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaagag 6498829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 43955613 - 43955667
Alignment:
Q  32 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43955613 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 43955667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 34398938 - 34399011
Alignment:
Q  24 acctcaaa-tagttgaattc-cctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactctaag 34399011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 35776939 - 35777019
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  35776939 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactcttagag 35777019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 49052877 - 49052786
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||||  | |||||||||| |||||    
T  49052877 ggtgaattctattgtttgaattcaactcaaagtagttgaattcactcaaaacattacatt-cctcaaaacattttctcatccaaacacactct 49052786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 21635975 - 21635885
Alignment:
Q  3 tgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||| |||||||| |||| ||||||||| || |||||    
T  21635975 tgaattctattgtttgaatccacctcaaaataattgaatcccctcaaaacattacattacctcaaaatattctcccatccaagcacactct 21635885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 35455861 - 35455802
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  35455861 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctaa 35455802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 39342626 - 39342701
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||| |||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  39342626 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 39342701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 14603264 - 14603326
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  14603264 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagag 14603326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 23455231 - 23455309
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||| |||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||| | ||||||    
T  23455231 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacacattctaag 23455309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 21635969 - 21636038
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  21635969 gaattcatctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 23548595 - 23548672
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    ||||||||| |||| || ||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  23548595 gaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 23548672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 9784933 - 9784989
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactc 91  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||    
T  9784933 ttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 29639199 - 29639274
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| || ||||||| ||||| ||||||||||||||| |||||||||||||||||| ||| |||||    
T  29639199 gaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactct 29639274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 25189211 - 25189285
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||| ||||| || |||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||    
T  25189211 aattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactct 25189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 46069458 - 46069550
Alignment:
Q  1 ggtgaattctattgtttgaattcacctc-aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaag 95  Q
    ||||||||||||||||||||| || ||| ||||| ||||||||||||  ||||||||||| |||| ||| ||||||||||||||||| ||| ||||    
T  46069458 ggtgaattctattgtttgaatccatctcaaaataattgaattccctc--aacattacattacctc-aaatattcccccatccaaacacactataag 46069550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 30524312 - 30524255
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||| ||| |||||    
T  30524312 ttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactct 30524255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 46069466 - 46069421
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccc 62  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  46069466 gaattcacctcaaagtagttgaattccctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 18789230 - 18789306
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactcta 93  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| ||||||| ||||| ||||||||||| ||||||    
T  18789230 gaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactcta 18789306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 22351874 - 22351922
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 83  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||||    
T  22351874 ttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 30629111 - 30629063
Alignment:
Q  38 aattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||| || |||||| |||||||||||||||||||||||||||||||||    
T  30629111 aattctcttaaaacaatacattccctcaaaacattcccccatccaaaca 30629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 34388340 - 34388265
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| ||| ||||||||||| |||| |||||||| || |||||||| ||| ||||||||||||| |||||    
T  34388340 gaattcaccttaaagtagttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacacactct 34388265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 22391572 - 22391626
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacatt 72  Q
    ||||||||||||| || || ||||| |||||||||||||||||||||||||||||    
T  22391572 aattcacctcaaaatatttaaattctctcaaaacattacattccctcaaaacatt 22391626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 40854022 - 40853984
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  40854022 attccctcaaaacattcccccatccaaacacactctaag 40853984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 43791162 - 43791116
Alignment:
Q  21 ttcacctcaaa-tagttgaattccctcaaaacattacattccctcaa 66  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||    
T  43791162 ttcacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 49052869 - 49052935
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||| ||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  49052869 gaattcaccttaaagtagttgaattccctcaaaacattacatt-cctc-aaacatt-ccccatccaaaca 49052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 13815000 - 13815040
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  13815000 attccctcaaaacattcccctatccaaacacactctaagag 13815040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 29195756 - 29195709
Alignment:
Q  45 tcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| |||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactct 29195709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 92
Target Start/End: Complemental strand, 31913271 - 31913236
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||||||||||||||||||| |||||    
T  31913271 attccctcaaaacattcccccatccaaacacactct 31913236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 91
Target Start/End: Original strand, 30587909 - 30587943
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactc 91  Q
    |||||||||||||||||||||||||||||| ||||    
T  30587909 attccctcaaaacattcccccatccaaacacactc 30587943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 46482011 - 46481941
Alignment:
Q  27 tcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaagag 97  Q
    |||||||||| |||| ||||||||||||||||||  || ||| |||  |||||||||||| ||||| ||||    
T  46482011 tcaaatagttaaatttcctcaaaacattacattctttcgaaatattttcccatccaaacacactcttagag 46481941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 31913289 - 31913256
Alignment:
Q  21 ttcacctcaaatagttgaattccctcaaaacatt 54  Q
    ||||||| ||||||||||||||||||||||||||    
T  31913289 ttcaccttaaatagttgaattccctcaaaacatt 31913256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 31913309 - 31913342
Alignment:
Q  61 cctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||||||||||||| |||||||    
T  31913309 cctcaaaacattcccccatccaaacacactctaa 31913342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 2941 - 2863
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaaga 96  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||    
T  2941 gaattcacctcaaatatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactctaaga 2863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 42072 - 41995
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||    
T  42072 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactctaa 41995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 42080 - 42137
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 42137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 83018 - 82949
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  83018 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaaca 82949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 56366 - 56304
Alignment:
Q  1 ggtgaattctattgtttgaattcacctcaaa-tagttgaattccctcaaaacattacattccc 62  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  56366 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccc 56304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 56358 - 56427
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  56358 gaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattccctcatccaaaca 56427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 4150 - 4075
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||||||| || |||||||||||||||||||||||||| |||||||||||||   ||||||||| |||||    
T  4150 gaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactct 4075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 4508 - 4570
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactc 91  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  4508 aaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 5152 - 5214
Alignment:
Q  29 aaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactc 91  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  5152 aaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 19272 - 19204
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    |||||||||||||| || ||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  19272 gaattcacctcaaaatatttgaattcc-tcaaaacattacattccctcaaaatactcccccatccaaaca 19204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 19784 - 19851
Alignment:
Q  19 aattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||||| || |||||||  || |||||||||||||||||||||||| |||||||||||||||    
T  19784 aattcacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaaca 19851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 7208 - 7157
Alignment:
Q  35 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 86  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  7208 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaaca 7157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 10961 - 10887
Alignment:
Q  18 gaattcacctcaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactc 91  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||  |||| |||||| ||||    
T  10961 gaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacactc 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 17605 - 17643
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaag 95  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17605 attccctcaaaacattcccccatccaaacacactctaag 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 109084 - 109047
Alignment:
Q  57 attccctcaaaacattcccccatccaaacaaactctaa 94  Q
    |||||||||||||||||||||||||||||| |||||||    
T  109084 attccctcaaaacattcccccatccaaacacactctaa 109047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 15864 - 15936
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| || || |||||||| |||| | |||||||||||| ||||||| ||||||||||||||| |||||    
T  15864 gaattcacct-aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacacactct 15936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 2906 - 2978
Alignment:
Q  18 gaattcacctcaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaaactct 92  Q
    |||||||||| || || |||||||| |||| | |||||||||||| ||||||| ||||||||||||||| |||||    
T  2906 gaattcacct-aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacacactct 2978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University