View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18093_low_1 (Length: 270)
Name: NF18093_low_1
Description: NF18093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18093_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 36277315 - 36277079
Alignment:
| Q |
18 |
cagacagacagtgatgaaaataccaacatcaagagatctctttaacacaaggaaatttgcacaagacaatgacctcgggcctcctgtggctgctgnnnnn |
117 |
Q |
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| T |
36277315 |
cagacagacagtgatgaaaataccaacatcaagagatctctttaacacaaagaaatttgcacaagacaatgacctcgggcctcctgtggctgctgttttt |
36277216 |
T |
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| Q |
118 |
nncaatgcacaaagagaaacagctgccagaagacgttgaaattgattaaaaccataaactaaaagtgattgtacgtgctaatgctatttatagctaaagt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36277215 |
ttcaatgcacaaagagaaacagctgccagaagacgttgaaattgattaaaaccataaactaaaagtgattgtacgtgctaatgctatttatagctaaagt |
36277116 |
T |
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| Q |
218 |
tgcacaaaataagtttagctattaagggtgttttttg |
254 |
Q |
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||||||||||||||||||||||| ||||||||||||| |
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| T |
36277115 |
tgcacaaaataagtttagctatttagggtgttttttg |
36277079 |
T |
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