View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18095_high_5 (Length: 382)
Name: NF18095_high_5
Description: NF18095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18095_high_5 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 13 - 382
Target Start/End: Original strand, 13759198 - 13759567
Alignment:
| Q |
13 |
aatattacatatatactatatgaagaaacacatggtatagaaaaattcaaaatgaaagtggagacacttgccttgttcgtagggttctacctcgaaaaag |
112 |
Q |
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| T |
13759198 |
aatattacatatatactatatgaagaaacacatggtatagaaaaattcaaaatgaaagtggagacacttgccttgttcgtagggttctatctcgaaaatg |
13759297 |
T |
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| Q |
113 |
acaggtaaccacgttggagcaacggtgctaccggagaaagttgtaccgctcgagctcacaaaacagaagacaagacaataaagcttaatcatagtgttac |
212 |
Q |
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| T |
13759298 |
acaggtaaccacgttggagcaacggtgctaccggagaaagttgtactgatcgagatcacaaaaaagaagacaaaacaataaagattaatcatagtgttac |
13759397 |
T |
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| Q |
213 |
ttctcatctctcactctctctgaactaaaaagaaaaatttcttctgaagaacaacaatgagtgcttgcctatatataaaatatatgcacacccaatggaa |
312 |
Q |
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| T |
13759398 |
ttctcatctctcactctctctgaactaaaaagaaaaatttcttctgaagaacaagaatgagtgcttgcctatatataaaatatatgcacacccaatggaa |
13759497 |
T |
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| Q |
313 |
caagtaaccaaaataaaaaagtcctctaaataaataagtagcatgcgaaatgaaagaagatatttttggt |
382 |
Q |
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| T |
13759498 |
caagtaaccaaaataaaaaagtcctctaaaaaaataagtagcatgcgaaataaaagaagatattcttggt |
13759567 |
T |
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