View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18096_low_3 (Length: 348)

Name: NF18096_low_3
Description: NF18096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18096_low_3
NF18096_low_3
[»] chr1 (58 HSPs)
chr1 (134-348)||(47392222-47392437)
chr1 (149-348)||(8893392-8893593)
chr1 (160-318)||(21326583-21326744)
chr1 (150-348)||(26199680-26199881)
chr1 (191-348)||(44513815-44513975)
chr1 (149-348)||(33177411-33177612)
chr1 (142-348)||(22344725-22344934)
chr1 (147-318)||(27469551-27469725)
chr1 (172-345)||(28213170-28213345)
chr1 (19-80)||(47392107-47392168)
chr1 (161-318)||(44562592-44562752)
chr1 (160-348)||(12147861-12148052)
chr1 (170-318)||(12967575-12967726)
chr1 (172-348)||(33703323-33703502)
chr1 (182-348)||(6212727-6212896)
chr1 (183-317)||(37684934-37685071)
chr1 (183-317)||(37700446-37700583)
chr1 (160-345)||(52839640-52839828)
chr1 (142-277)||(23320532-23320669)
chr1 (182-347)||(14717084-14717252)
chr1 (142-311)||(23257180-23257352)
chr1 (160-348)||(38646694-38646885)
chr1 (170-318)||(5832354-5832505)
chr1 (170-318)||(48654884-48655035)
chr1 (163-255)||(10264822-10264915)
chr1 (147-259)||(29067146-29067259)
chr1 (147-318)||(11121073-11121247)
chr1 (142-310)||(15698292-15698461)
chr1 (159-290)||(22031962-22032096)
chr1 (150-318)||(13969483-13969657)
chr1 (160-348)||(2350732-2350923)
chr1 (170-318)||(15276289-15276444)
chr1 (182-318)||(45659146-45659285)
chr1 (142-213)||(49651936-49652007)
chr1 (142-348)||(4564609-4564817)
chr1 (172-318)||(36621474-36621623)
chr1 (202-310)||(900245-900356)
chr1 (170-348)||(630597-630778)
chr1 (147-289)||(37662307-37662452)
chr1 (160-347)||(32539002-32539194)
chr1 (147-293)||(34566785-34566932)
chr1 (182-256)||(46589279-46589354)
chr1 (279-348)||(14265522-14265591)
chr1 (161-213)||(10877457-10877509)
chr1 (261-348)||(26771319-26771407)
chr1 (230-348)||(34659454-34659574)
chr1 (162-209)||(30853744-30853791)
chr1 (279-317)||(51418222-51418260)
chr1 (279-348)||(4870847-4870916)
chr1 (279-348)||(10627237-10627306)
chr1 (279-348)||(12871853-12871922)
chr1 (279-348)||(15391066-15391135)
chr1 (279-348)||(32878940-32879009)
chr1 (142-273)||(38644686-38644819)
chr1 (147-235)||(40488325-40488414)
chr1 (279-348)||(42276593-42276662)
chr1 (279-348)||(45193442-45193511)
chr1 (279-347)||(26097826-26097894)
[»] chr2 (66 HSPs)
chr2 (142-348)||(7640169-7640378)
chr2 (171-347)||(11550409-11550589)
chr2 (150-348)||(28228322-28228523)
chr2 (160-348)||(19580815-19581006)
chr2 (160-348)||(26491412-26491602)
chr2 (142-348)||(27023952-27024161)
chr2 (160-318)||(29734300-29734461)
chr2 (161-240)||(44441493-44441573)
chr2 (160-348)||(10589205-10589396)
chr2 (142-309)||(25771537-25771707)
chr2 (170-309)||(27191189-27191330)
chr2 (170-309)||(27841003-27841144)
chr2 (159-318)||(37883762-37883924)
chr2 (149-311)||(7443416-7443581)
chr2 (160-346)||(13268682-13268871)
chr2 (160-318)||(43929143-43929304)
chr2 (142-237)||(11931006-11931102)
chr2 (183-348)||(15673781-15673949)
chr2 (142-276)||(16879851-16879987)
chr2 (142-276)||(16991984-16992120)
chr2 (160-277)||(44951529-44951648)
chr2 (142-348)||(43566966-43567174)
chr2 (142-348)||(25516585-25516793)
chr2 (160-348)||(25622857-25623049)
chr2 (147-348)||(2251160-2251362)
chr2 (200-345)||(20036532-20036680)
chr2 (142-311)||(36508022-36508193)
chr2 (142-311)||(44167561-44167732)
chr2 (142-348)||(3603077-3603286)
chr2 (160-274)||(24500597-24500713)
chr2 (161-318)||(41176970-41177129)
chr2 (182-348)||(3465061-3465230)
chr2 (160-274)||(4878624-4878740)
chr2 (160-303)||(25237189-25237330)
chr2 (142-318)||(5930515-5930694)
chr2 (142-346)||(9715359-9715566)
chr2 (160-348)||(17068729-17068919)
chr2 (142-311)||(3390524-3390687)
chr2 (142-348)||(38822165-38822373)
chr2 (161-258)||(40125500-40125598)
chr2 (147-213)||(41842045-41842111)
chr2 (161-311)||(5071220-5071373)
chr2 (159-223)||(17118753-17118818)
chr2 (160-303)||(19953680-19953825)
chr2 (160-318)||(29812458-29812618)
chr2 (279-348)||(44942524-44942593)
chr2 (142-311)||(6089983-6090154)
chr2 (201-348)||(42105579-42105727)
chr2 (160-310)||(16720699-16720852)
chr2 (160-223)||(17074852-17074916)
chr2 (160-207)||(10589177-10589224)
chr2 (147-213)||(15071500-15071566)
chr2 (221-348)||(3397792-3397921)
chr2 (279-348)||(4732308-4732377)
chr2 (279-348)||(13878823-13878892)
chr2 (279-348)||(14018948-14019017)
chr2 (279-348)||(15920106-15920175)
chr2 (279-348)||(29543031-29543100)
chr2 (279-348)||(34480197-34480266)
chr2 (160-223)||(17095425-17095489)
chr2 (279-318)||(34962920-34962959)
chr2 (166-213)||(44562582-44562629)
chr2 (279-348)||(18141294-18141363)
chr2 (279-348)||(5754520-5754589)
chr2 (279-348)||(43696106-43696175)
chr2 (282-318)||(7581937-7581973)
[»] chr5 (50 HSPs)
chr5 (147-348)||(20270811-20271015)
chr5 (160-348)||(41554597-41554788)
chr5 (147-348)||(18472539-18472742)
chr5 (147-348)||(33486382-33486586)
chr5 (160-348)||(40774870-40775062)
chr5 (147-348)||(22397365-22397565)
chr5 (142-348)||(29310167-29310376)
chr5 (149-348)||(8811965-8812166)
chr5 (182-348)||(6647726-6647895)
chr5 (142-318)||(4726771-4726950)
chr5 (170-348)||(4070672-4070852)
chr5 (142-348)||(31645921-31646130)
chr5 (170-318)||(2415520-2415671)
chr5 (147-311)||(6887028-6887195)
chr5 (142-344)||(9034759-9034964)
chr5 (142-348)||(28618695-28618903)
chr5 (177-348)||(19645855-19646028)
chr5 (180-296)||(34844046-34844165)
chr5 (160-242)||(34866537-34866620)
chr5 (161-277)||(15710653-15710771)
chr5 (160-318)||(34873971-34874132)
chr5 (182-348)||(35906401-35906570)
chr5 (160-259)||(41988262-41988362)
chr5 (174-318)||(5378426-5378573)
chr5 (160-348)||(13007802-13007992)
chr5 (170-348)||(28388921-28389103)
chr5 (173-348)||(32387588-32387765)
chr5 (160-213)||(20146167-20146220)
chr5 (186-348)||(28500825-28500990)
chr5 (142-311)||(10923984-10924155)
chr5 (163-299)||(32390509-32390648)
chr5 (147-348)||(40564970-40565172)
chr5 (279-348)||(23428490-23428559)
chr5 (178-311)||(6074586-6074722)
chr5 (171-348)||(8957327-8957507)
chr5 (173-213)||(24288877-24288917)
chr5 (173-213)||(24373305-24373345)
chr5 (178-318)||(12524507-12524650)
chr5 (142-318)||(41063239-41063418)
chr5 (160-254)||(41358149-41358244)
chr5 (160-316)||(13079255-13079413)
chr5 (279-348)||(7771635-7771704)
chr5 (279-348)||(25962151-25962220)
chr5 (160-236)||(37425134-37425211)
chr5 (279-348)||(2555164-2555233)
chr5 (279-348)||(6635486-6635555)
chr5 (160-348)||(13080263-13080455)
chr5 (279-348)||(23881930-23881999)
chr5 (279-347)||(7151043-7151111)
chr5 (279-347)||(39531227-39531295)
[»] chr3 (51 HSPs)
chr3 (173-348)||(32237809-32237987)
chr3 (149-348)||(913129-913331)
chr3 (150-348)||(40797133-40797334)
chr3 (160-344)||(4019705-4019895)
chr3 (149-348)||(22844151-22844353)
chr3 (161-348)||(29776503-29776693)
chr3 (142-348)||(43029775-43029984)
chr3 (149-302)||(25939338-25939494)
chr3 (161-348)||(22893527-22893718)
chr3 (142-348)||(1165209-1165418)
chr3 (149-348)||(39340298-39340500)
chr3 (142-311)||(45664313-45664485)
chr3 (142-348)||(3088477-3088685)
chr3 (161-344)||(21586010-21586196)
chr3 (160-348)||(28995122-28995312)
chr3 (147-348)||(53426895-53427099)
chr3 (142-346)||(32089746-32089952)
chr3 (142-348)||(41882223-41882431)
chr3 (142-318)||(29182453-29182630)
chr3 (191-339)||(27831240-27831391)
chr3 (161-259)||(40365337-40365435)
chr3 (170-309)||(50519904-50520045)
chr3 (160-259)||(1220151-1220251)
chr3 (142-311)||(33977775-33977946)
chr3 (160-348)||(40461808-40461999)
chr3 (142-318)||(54240178-54240357)
chr3 (170-309)||(22286603-22286744)
chr3 (279-348)||(4206376-4206445)
chr3 (279-348)||(11819321-11819390)
chr3 (279-348)||(40883688-40883757)
chr3 (215-348)||(33076451-33076586)
chr3 (277-348)||(33637639-33637710)
chr3 (277-348)||(48652262-48652333)
chr3 (279-348)||(4081946-4082015)
chr3 (174-348)||(20200871-20201048)
chr3 (279-348)||(22485203-22485272)
chr3 (279-348)||(32080576-32080645)
chr3 (279-348)||(36691621-36691690)
chr3 (160-274)||(42106250-42106364)
chr3 (279-347)||(1074717-1074785)
chr3 (160-259)||(7656419-7656519)
chr3 (182-311)||(37051728-37051858)
chr3 (201-348)||(50460341-50460491)
chr3 (279-348)||(10977475-10977544)
chr3 (279-348)||(19645429-19645498)
chr3 (174-348)||(20203053-20203230)
chr3 (279-348)||(30156103-30156172)
chr3 (279-348)||(39610448-39610517)
chr3 (279-348)||(49627917-49627986)
chr3 (279-348)||(55455109-55455178)
chr3 (185-318)||(11846684-11846819)
[»] chr6 (34 HSPs)
chr6 (142-318)||(32804387-32804566)
chr6 (142-348)||(23843237-23843446)
chr6 (160-348)||(12576294-12576484)
chr6 (142-348)||(13233921-13234130)
chr6 (170-348)||(19759908-19760089)
chr6 (179-346)||(11426070-11426240)
chr6 (147-348)||(10744680-10744883)
chr6 (189-348)||(20496332-20496494)
chr6 (161-303)||(20845119-20845264)
chr6 (171-318)||(1944217-1944367)
chr6 (180-316)||(8644375-8644514)
chr6 (147-222)||(5417139-5417215)
chr6 (173-348)||(12652014-12652188)
chr6 (279-348)||(6419672-6419741)
chr6 (147-203)||(15128114-15128170)
chr6 (160-302)||(33541390-33541533)
chr6 (277-348)||(12481184-12481255)
chr6 (277-348)||(30813302-30813373)
chr6 (282-348)||(5417037-5417103)
chr6 (160-292)||(34020715-34020848)
chr6 (142-254)||(891680-891793)
chr6 (161-311)||(7049356-7049509)
chr6 (279-348)||(13871440-13871509)
chr6 (279-348)||(23101222-23101291)
chr6 (279-348)||(35219727-35219796)
chr6 (279-347)||(1106682-1106750)
chr6 (142-277)||(32457738-32457874)
chr6 (142-318)||(548709-548888)
chr6 (142-256)||(33194697-33194812)
chr6 (142-235)||(5544799-5544893)
chr6 (147-235)||(4663748-4663837)
chr6 (279-348)||(12654123-12654192)
chr6 (279-348)||(23637934-23638003)
chr6 (160-259)||(904378-904478)
[»] chr4 (57 HSPs)
chr4 (142-318)||(23067691-23067870)
chr4 (161-348)||(46716707-46716897)
chr4 (160-348)||(29576934-29577126)
chr4 (147-348)||(38434696-38434899)
chr4 (147-348)||(46728733-46728937)
chr4 (162-311)||(14346543-14346695)
chr4 (147-348)||(15729794-15729998)
chr4 (142-344)||(2945229-2945434)
chr4 (159-348)||(29474141-29474334)
chr4 (147-311)||(4634380-4634547)
chr4 (142-348)||(9661945-9662154)
chr4 (173-313)||(3169549-3169692)
chr4 (160-316)||(7242614-7242773)
chr4 (142-348)||(14542325-14542534)
chr4 (164-318)||(28990412-28990569)
chr4 (160-318)||(42972148-42972309)
chr4 (147-309)||(32189077-32189241)
chr4 (147-277)||(46775742-46775873)
chr4 (142-318)||(12519748-12519927)
chr4 (147-318)||(33020770-33020942)
chr4 (171-348)||(26576316-26576495)
chr4 (160-348)||(30469936-30470126)
chr4 (159-268)||(40859783-40859894)
chr4 (178-348)||(51646222-51646398)
chr4 (160-310)||(30416444-30416597)
chr4 (147-259)||(43156873-43156986)
chr4 (173-256)||(1645462-1645546)
chr4 (163-348)||(16991985-16992173)
chr4 (142-348)||(34115469-34115673)
chr4 (170-310)||(9474390-9474533)
chr4 (170-318)||(37869260-37869411)
chr4 (160-347)||(4959388-4959577)
chr4 (172-319)||(6789718-6789868)
chr4 (142-308)||(20961541-20961709)
chr4 (160-318)||(41486685-41486846)
chr4 (147-348)||(1657379-1657583)
chr4 (170-344)||(31601173-31601352)
chr4 (160-348)||(29589174-29589365)
chr4 (182-302)||(53903713-53903836)
chr4 (149-207)||(30416578-30416636)
chr4 (160-318)||(44021424-44021575)
chr4 (190-318)||(52555583-52555714)
chr4 (279-348)||(30202276-30202345)
chr4 (160-237)||(35338504-35338582)
chr4 (164-310)||(1125055-1125204)
chr4 (160-318)||(5388625-5388786)
chr4 (279-348)||(26674610-26674679)
chr4 (279-348)||(43244195-43244264)
chr4 (211-316)||(9526190-9526297)
chr4 (200-243)||(9781728-9781771)
chr4 (279-342)||(31311700-31311763)
chr4 (182-348)||(54420553-54420723)
chr4 (279-348)||(22757332-22757401)
chr4 (279-348)||(24611614-24611683)
chr4 (142-215)||(44375213-44375286)
chr4 (160-209)||(47466015-47466064)
chr4 (161-213)||(47704297-47704349)
[»] scaffold0722 (1 HSPs)
scaffold0722 (142-348)||(5339-5548)
[»] chr8 (50 HSPs)
chr8 (142-318)||(8054651-8054829)
chr8 (147-308)||(37659063-37659227)
chr8 (161-344)||(12244033-12244219)
chr8 (142-348)||(41996637-41996844)
chr8 (142-348)||(44295408-44295617)
chr8 (160-345)||(15665649-15665837)
chr8 (161-320)||(14115669-14115831)
chr8 (160-259)||(26937635-26937735)
chr8 (142-311)||(32412882-32413054)
chr8 (160-348)||(5917562-5917746)
chr8 (142-348)||(5457163-5457372)
chr8 (142-277)||(9270113-9270250)
chr8 (142-259)||(26582793-26582910)
chr8 (147-253)||(12248624-12248731)
chr8 (178-311)||(23766867-23767004)
chr8 (147-348)||(16937152-16937356)
chr8 (160-344)||(10042882-10043069)
chr8 (149-348)||(32256534-32256736)
chr8 (147-310)||(1215192-1215356)
chr8 (147-308)||(3925543-3925707)
chr8 (142-348)||(7280942-7281149)
chr8 (142-303)||(16996747-16996910)
chr8 (160-274)||(31712964-31713080)
chr8 (170-311)||(37129525-37129668)
chr8 (145-348)||(9992762-9992967)
chr8 (147-311)||(32061891-32062058)
chr8 (163-318)||(11298603-11298761)
chr8 (163-316)||(5989743-5989899)
chr8 (160-303)||(17019228-17019374)
chr8 (160-303)||(17549665-17549811)
chr8 (170-348)||(32104650-32104832)
chr8 (279-348)||(19720247-19720316)
chr8 (160-259)||(14327589-14327689)
chr8 (160-259)||(16938175-16938275)
chr8 (147-293)||(18190714-18190861)
chr8 (279-348)||(10148183-10148252)
chr8 (160-213)||(16808986-16809039)
chr8 (163-348)||(2629025-2629211)
chr8 (171-273)||(31874205-31874309)
chr8 (160-214)||(27534362-27534416)
chr8 (285-347)||(38545977-38546039)
chr8 (279-348)||(7579677-7579746)
chr8 (279-348)||(12329865-12329934)
chr8 (279-348)||(14600520-14600589)
chr8 (279-348)||(23971005-23971074)
chr8 (168-243)||(3028171-3028247)
chr8 (279-347)||(3204608-3204676)
chr8 (160-212)||(15237590-15237642)
chr8 (161-318)||(18196989-18197149)
chr8 (203-348)||(37719993-37720141)
[»] chr7 (56 HSPs)
chr7 (142-309)||(23732245-23732415)
chr7 (142-348)||(40775359-40775568)
chr7 (147-318)||(9933944-9934114)
chr7 (147-318)||(28015454-28015628)
chr7 (160-256)||(13008580-13008677)
chr7 (142-348)||(26017471-26017680)
chr7 (161-318)||(7986003-7986163)
chr7 (170-348)||(8319435-8319616)
chr7 (142-348)||(11001936-11002144)
chr7 (160-310)||(772553-772706)
chr7 (142-277)||(47749826-47749963)
chr7 (161-318)||(14707694-14707854)
chr7 (166-318)||(10250326-10250481)
chr7 (147-318)||(134988-135162)
chr7 (142-317)||(42490795-42490973)
chr7 (170-303)||(24470514-24470649)
chr7 (170-303)||(24475462-24475597)
chr7 (142-311)||(43807000-43807172)
chr7 (171-276)||(22751559-22751666)
chr7 (160-348)||(30992636-30992827)
chr7 (179-311)||(40476836-40476971)
chr7 (147-346)||(5024871-5025073)
chr7 (147-235)||(23177511-23177600)
chr7 (142-311)||(8611474-8611645)
chr7 (160-348)||(49167036-49167226)
chr7 (160-277)||(44681570-44681689)
chr7 (212-348)||(33530288-33530426)
chr7 (147-213)||(43483697-43483763)
chr7 (279-348)||(3266624-3266693)
chr7 (159-316)||(34893220-34893378)
chr7 (279-348)||(36253168-36253237)
chr7 (174-348)||(46918524-46918700)
chr7 (160-348)||(38649171-38649361)
chr7 (182-268)||(39090220-39090308)
chr7 (182-318)||(36350300-36350439)
chr7 (279-348)||(41288194-41288263)
chr7 (147-243)||(14733971-14734066)
chr7 (201-318)||(19895527-19895647)
chr7 (161-311)||(21329148-21329299)
chr7 (147-311)||(29804529-29804692)
chr7 (182-302)||(37399730-37399853)
chr7 (279-348)||(32643206-32643275)
chr7 (279-348)||(36579155-36579224)
chr7 (198-303)||(37890347-37890455)
chr7 (281-348)||(9137190-9137257)
chr7 (163-255)||(24045188-24045282)
chr7 (163-213)||(35135135-35135184)
chr7 (279-316)||(6667633-6667670)
chr7 (279-348)||(17509018-17509087)
chr7 (279-348)||(17544127-17544196)
chr7 (279-348)||(21954638-21954707)
chr7 (279-348)||(35362920-35362989)
chr7 (279-348)||(36719366-36719435)
chr7 (279-348)||(38277076-38277145)
chr7 (279-348)||(45482302-45482371)
chr7 (230-348)||(21552268-21552388)
[»] scaffold0316 (1 HSPs)
scaffold0316 (142-346)||(12018-12225)
[»] scaffold0012 (1 HSPs)
scaffold0012 (160-308)||(244746-244897)
[»] scaffold0665 (1 HSPs)
scaffold0665 (161-320)||(968-1130)
[»] scaffold0024 (1 HSPs)
scaffold0024 (142-311)||(36621-36788)
[»] scaffold0157 (1 HSPs)
scaffold0157 (142-318)||(984-1163)
[»] scaffold0023 (1 HSPs)
scaffold0023 (182-308)||(91257-91385)
[»] scaffold0011 (1 HSPs)
scaffold0011 (170-318)||(11134-11285)
[»] scaffold0150 (1 HSPs)
scaffold0150 (142-235)||(10239-10333)
[»] scaffold0627 (1 HSPs)
scaffold0627 (142-255)||(6695-6807)
[»] scaffold0340 (1 HSPs)
scaffold0340 (149-348)||(11589-11793)
[»] scaffold0536 (1 HSPs)
scaffold0536 (279-348)||(3138-3207)
[»] scaffold0432 (1 HSPs)
scaffold0432 (279-348)||(2256-2325)
[»] scaffold0155 (1 HSPs)
scaffold0155 (279-348)||(35322-35391)


Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 134 - 348
Target Start/End: Original strand, 47392222 - 47392437
Alignment:
Q  134 attggaaattatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttg 233  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47392222 attggaaattatcttgtgatttcactgtcttagcgtgacgttggtttgttcgtcgtctttgtgcggcgttgtttgtctttttgtttcgttcagatatttg 47392321  T
Q  234 ttcgattcaggttttcagatcagcttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggaga 332  Q
    |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47392322 ttcggtttaggttttcagatcagcttgatccagtgtagatccaataaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcagaga 47392421  T
Q  333 cttgaatatagtcata 348  Q
    ||||||||||||||||    
T  47392422 cttgaatatagtcata 47392437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 348
Target Start/End: Original strand, 8893392 - 8893593
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttt 247  Q
    |||||||||  ||||||||  ||| |||  ||| |||||||||||||  |||||||||||||||| |||||| |||||| |||||||||| ||||| |||    
T  8893392 gtgatttcatcgtcttagtacgacattgtgttgctcgtcgtctttgtgaggcgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattt 8893491  T
Q  248 tcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtc 345  Q
    |||||||||||| ||||||||| | ||||||  |||||||||| ||||||| |||||||||||||| |||||| |||  | |||||| ||||||||||||    
T  8893492 tcagatcagcttagatccagtgcaaatccaatcaatgactttgacgtcgtcaacgttgtagatccggagacataggtattccggaga-ttgaatatagtc 8893590  T
Q  346 ata 348  Q
    |||    
T  8893591 ata 8893593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 21326583 - 21326744
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||||||| |||||||||||||||||||||| || |||||||||||||| ||||||   |||| |||||| ||| ||||| || |||||||||||    
T  21326583 gtcttcgtgtgacattggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttttctcaggtatttgatcggttcagattgtcagatcagct 21326682  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| ||||||    
T  21326683 tcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacat 21326744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 348
Target Start/End: Original strand, 26199680 - 26199881
Alignment:
Q  150 tgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggtttt 248  Q
    ||||||||  ||||||||| ||| ||| |||||||||||||||||| || |||||||| ||||| ||||||||||||| ||||||||||||||||||| |    
T  26199680 tgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttatctttcttgtttcgttcaggtatttgttcgattcaggttgt 26199779  T
Q  249 cagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtca 346  Q
    ||||||||||| ||||||||  | ||| ||  ||||||||||  |||||| ||| || ||||||||||||||  ||  |  |||||||| ||||||||||    
T  26199780 cagatcagcttcgatccagtacaaatcaaatcaatgactttgaagtcgtcaacgatgcagatccgaagacatacgtattatggagacttaaatatagtca 26199879  T
Q  347 ta 348  Q
    ||    
T  26199880 ta 26199881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 191 - 348
Target Start/End: Complemental strand, 44513975 - 44513815
Alignment:
Q  191 tttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgacttt 287  Q
    ||||| || |||||||||||||| ||||||||||||| |||||||||||||||| || |||||||||||| ||||||||| ||||| ||  |||||||||    
T  44513975 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgacttt 44513876  T
Q  288 ggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    || |||||| |||||| ||||||| |||||| |||  | ||||||||| ||||||||||||    
T  44513875 ggagtcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcata 44513815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 33177612 - 33177411
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggtttt 248  Q
    ||||||||| |||||||||| |||||||  ||||||| ||||||||| |  |||||||||| ||||||||| |||||  |||||||||| ||||| || |    
T  33177612 gtgatttcattgtcttagtgcgacgttgtgttgttcgccgtctttgtgcaacgttgtttgtgtttttgttttgttcatgtatttgttcggttcagattgt 33177513  T
Q  249 cagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtca 346  Q
    ||||||| ||| ||||||||| ||||||||  ||||||||||| |||||| || ||| | ||||| ||||||  ||  |  |||||||||||||||||||    
T  33177512 cagatcaacttagatccagtgcagatccaatcaatgactttggtgtcgtcaacattgcaaatccggagacatgagtattatggagacttgaatatagtca 33177413  T
Q  347 ta 348  Q
    ||    
T  33177412 ta 33177411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 22344934 - 22344725
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||    
T  22344934 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagtt 22344835  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| ||||||||| ||||||||  |||||||||| |||| ||||||||| ||||||| | ||| ||||| || |||||| || |    
T  22344834 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggataca-tggttattccggagatttaa 22344736  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  22344735 atatagtcata 22344725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 318
Target Start/End: Complemental strand, 27469725 - 27469551
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||||||| ||||||| |||||||||| || |||||||||||||| ||||||||||||| || |||||| ||| || |    
T  27469725 ttgtgatttcgtcgtcttagtgcgacgttgttttgttcatcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtaattgttcaatttagat 27469626  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | |||||||||||| ||||||||| ||||| ||  |||| |||||| |||||| |||||| ||||||| ||||||    
T  27469625 tgtcagatcagcttcgatccagtgcagatcaaatcaatggctttggagtcgtcaacgttgcagatccggagacat 27469551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 345
Target Start/End: Original strand, 28213170 - 28213345
Alignment:
Q  172 cgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgt 269  Q
    |||| ||||||||||||||||||| || | |||||||||||| ||||||| ||||| |||||||||| ||||| || ||||||||| || ||||||||||    
T  28213170 cgttagtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctttcaggtatttgttcggttcagattgtcagatcagattcgatccagtgt 28213269  T
Q  270 agatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtc 345  Q
    ||||||||  ||||||||||| ||| ||||||||| | ||||| |||| |||||| || |||||| ||||||||||||    
T  28213270 agatccaatcaatgactttggtgtcatccacgttgca-atccggagac-ttggttattccggagatttgaatatagtc 28213345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 47392107 - 47392168
Alignment:
Q  19 ggacatcactttttatattagtatatatagactacatatgttttcttcctcaagatgagata 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47392107 ggacatcactttttatattagtatatatagactacatatgttttcttcctcaagatgagata 47392168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 318
Target Start/End: Complemental strand, 44562752 - 44562592
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||| ||| |||||||||||||||||||||||||| || | |||||||||||| |||||||  |||| |||||| | | ||||| || ||||||||||||    
T  44562752 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgataggttcagattgtcagatcagctt 44562653  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
     ||||||||| ||||||||  ||||||||||||||| || |||||| ||||||| ||||||    
T  44562652 cgatccagtgcagatccaatcaatgactttggcgtcatctacgttgcagatccggagacat 44562592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 12148052 - 12147861
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||||||| ||| ||||||||| || ||||| |  | |||||||||||| ||||||||||||| |||||||||||||||| || |||||||| ||    
T  12148052 gtcttagtgtgactttgttttgttcgttgtttttgtgcaacattgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcaact 12147953  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | |||| |||| ||||  ||| ||||||||||| |||||| |||||| | ||||| |||||| |||  | ||||||||| | ||||||||||    
T  12147952 tcgatctagtgcagataaaaagaatgactttggagtcgtcaacgttgcaaatccggagacatgggtattccggagacttaagtatagtcata 12147861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 170 - 318
Target Start/End: Complemental strand, 12967726 - 12967575
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||||||||||||||||||| || | |||||||||||| |||||||  |||| |||||| ||| ||||| || |||||||||||| ||||||||    
T  12967726 gacgttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagt 12967627  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | | ||||||  ||||||||||| ||| ||||||||||||||| | ||||||    
T  12967626 gcatatccaatcaatgactttggtgtcatccacgttgtagatctggagacat 12967575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 348
Target Start/End: Complemental strand, 33703502 - 33703323
Alignment:
Q  172 cgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatca-gcttgatccagtgt 269  Q
    ||||| |||||| ||||||||||| || |||||||||||||| ||||||||||||  |||||||| ||||||| || |||||||| | ||||||||||||    
T  33703502 cgttgttttgtttgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcacgtatttgtttgattcagattgtcagatcaggtttgatccagtgt 33703403  T
Q  270 agatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||| ||  ||||||||||| | |||| |||||| ||||||| |||||| | |  | | ||||||| ||||||||||||    
T  33703402 agatcaaatcaatgactttggagccgtcaacgttggagatccgtagacatggatattccagagacttaaatatagtcata 33703323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 182 - 348
Target Start/End: Complemental strand, 6212896 - 6212727
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa- 278  Q
    |||||||||||||| || | |||||||| ||| |||||||  |||| |||||| |||||||| ||| |||||||||||| |||| |||| ||||||||      
T  6212896 ttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgattcatgttgtcagatcagcttcgatcaagtgcagatccaatc 6212797  T
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||| || |||||| || ||||||||||||    
T  6212796 aatgactttggcgtcatccacgttgtagatccggagaca-tggttattccggagatttaaatatagtcata 6212727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 317
Target Start/End: Complemental strand, 37685071 - 37684934
Alignment:
Q  183 tcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-aa 279  Q
    |||||||||||||| | |||||||||||||| |||||||||||| ||||||||| ||||||| || |||||||||||| ||||||||| ||||  ||  |    
T  37685071 tcgtcgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcagattgtcagatcagcttcgatccagtgcagattaaatta 37684972  T
Q  280 atgactttggcgtcgtccacgttgtagatccgaagaca 317  Q
    |||||||||| |||||| |||||| ||||||| |||||    
T  37684971 atgactttggagtcgtcaacgttgcagatccggagaca 37684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 37700446 - 37700583
Alignment:
Q  183 tcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-aa 279  Q
    |||||||||||||| | |||||||||||||| |||||||||||| ||||||||| ||||||| || |||||||||||| ||||||||| ||||  ||  |    
T  37700446 tcgtcgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcagattgtcagatcagcttcgatccagtgcagattaaatta 37700545  T
Q  280 atgactttggcgtcgtccacgttgtagatccgaagaca 317  Q
    |||||||||| |||||| |||||| ||||||| |||||    
T  37700546 atgactttggagtcgtcaacgttgcagatccggagaca 37700583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 160 - 345
Target Start/End: Original strand, 52839640 - 52839828
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||||| |||||||||| |||||||  | |||||||||||||| ||||||||||||| |||||||||   |||| || |||||||||||    
T  52839640 gtcttagtgcgacgttgttttgttcgtcatctttgtgagacgttgtttgtctttcttgtttcgttcaggtatttgttcagctcagattgtcagatcagct 52839739  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtc 345  Q
    | ||||||||| ||||| ||  ||||||||||| |||||| |||||| | ||| | |||||| |||  |||||| |||| | |||||||    
T  52839740 tcgatccagtgcagatcaaatcaatgactttggagtcgtcaacgttgcaaatctggagacatgggtatttcggaaacttaactatagtc 52839828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 277
Target Start/End: Original strand, 23320532 - 23320669
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| |||||||||||||||||||||||||||||| || |||| ||||||||| |||||||  |||  |||||| ||| ||    
T  23320532 ttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttatttgtctttcttgtttctctcatgtatttgatcggtt 23320631  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa 277  Q
    ||| || |||||||||||| ||||||||| ||||||||    
T  23320632 cagattgtcagatcagcttcgatccagtgcagatccaa 23320669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 347
Target Start/End: Complemental strand, 14717252 - 14717084
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa- 278  Q
    |||||||||||||| || |||||||||| ||| |||||||  ||||||||||| ||| ||||| || ||||||||| || ||||||||| ||||||||      
T  14717252 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcagattcgatccagtgcagatccaatc 14717153  T
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    |||||| |||||||| ||||||||| ||||||| ||| || | |  |||||||| || |||||||||||    
T  14717152 aatgacattggcgtcatccacgttgcagatccggagaaatggttatttcggagatttaaatatagtcat 14717084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 23257180 - 23257352
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    ||||||||||||||||  ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| | | |     
T  23257180 ttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgattggtc 23257279  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||| || ||  || ||||| |||||| || ||||||||  ||||||||||||||| ||||||||| |||||||    
T  23257280 cagattgtctaattagcttcgatccactgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 23257352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 38646694 - 38646885
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||  |||||   || ||||| ||  ||||||||||    
T  38646694 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttaaccggttcagattgccagatcagct 38646793  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttc-ggagacttgaatatagtcata 348  Q
    | |||| |||||||||| ||  ||||||||||||||| ||||||||| ||||||| ||||| ||||| ||| ||||| || ||||||||||||    
T  38646794 tcgatctagtgtagatcaaatcaatgactttggcgtcatccacgttgcagatccggagaca-tggttattctggagatttaaatatagtcata 38646885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 318
Target Start/End: Original strand, 5832354 - 5832505
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||||||||||||| ||||| || |||||||||||||| |||||||  |||| |||||| ||| ||||| || ||||| |||||| ||||||||    
T  5832354 gacgttggtttgttcgtcgtatttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagaccagcttcgatccagt 5832453  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||||| ||  |||||||||| |||| ||||||||| ||||| | ||||||    
T  5832454 gcagatctaatcaatgactttgacgtcatccacgttgcagatctggagacat 5832505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 318
Target Start/End: Complemental strand, 48655035 - 48654884
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||  ||||||||   ||||| || ||| || ||||| ||| ||||    
T  48655035 gacgttggtttgttcgtcgtctttgtacaacgttgtttgtctttattgtttcgttcatgtatttgtttagttcagattgtcatattagcttcgattcagt 48654936  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||||||||  ||||||||||||||| | || |||| ||||||||| ||||    
T  48654935 gcagatccaatcaatgactttggcgtcattcatgttgcagatccgaaaacat 48654884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 10264822 - 10264915
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatca 255  Q
    |||||| |||||||||||||||||||||||||| |  |||||||||| ||| || |||||||||| |||||||||||||||| || ||||||||    
T  10264822 ttagtgcgacgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttttttcgttcaggtatttgttcgattcagattgtcagatca 10264915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 29067146 - 29067259
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    |||||||||||   |||||||| ||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||  ||||| |||| ||||  |    
T  29067146 ttgtgatttcatcttcttagtgcgacgttgttttgttcgtcgtctttgtgcagcgttgtttgtctttcttgttttgttcaagtatttattcggttcaaat 29067245  T
Q  246 tttcagatcagctt 259  Q
    ||||||||||||||    
T  29067246 tttcagatcagctt 29067259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 147 - 318
Target Start/End: Original strand, 11121073 - 11121247
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| || ||||  ||||||||| ||||||| |  |||||||||||||| |||||| |||||  |||||||||| ||||| |    
T  11121073 ttgtgatttcgtcgtcttagtgcgaggttgtgttgttcgtcatctttgtgcaacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagat 11121172  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | |||||||||||| ||||||||| ||||| ||  ||||||||||| ||| || || ||| ||||||| ||||||    
T  11121173 tgtcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcttcaacattgcagatccggagacat 11121247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 142 - 310
Target Start/End: Original strand, 15698292 - 15698461
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattc 241  Q
    |||| ||||||||||   ||||| |||||||||||||| |||| |||||||||  || |||||||||| || |||||||  |||| |||||| | | |||    
T  15698292 ttattttgtgatttcgtcgtctttgtgtgacgttggtt-gttcatcgtctttgggcgacgttgtttgttttgttgtttctctcaggtatttgattggttc 15698390  T
Q  242 aggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatcc 310  Q
    || || |||||||||||| ||||| ||| |||| |||  ||||||||||||||| ||||||||| ||||||    
T  15698391 agattgtcagatcagcttcgatccggtgcagattcaatcaatgactttggcgtcatccacgttgcagatcc 15698461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 22032096 - 22031962
Alignment:
Q  159 tgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc 257  Q
    |||||||||| || ||||||||||||||||||||| |  ||||||||||| |||| ||||||||||| | |||||||||  ||||  || ||||| |||     
T  22032096 tgtcttagtgcgatgttggtttgttcgtcgtctttatgtggcgttgtttgcctttcttgtttcgttccggtatttgttcagttcatattgtcagaccagt 22031997  T
Q  258 tt-gatccagtgtagatccaa-aaatgactttggc 290  Q
    || ||||||||||||||||||  ||||||||||||    
T  22031996 ttcgatccagtgtagatccaatcaatgactttggc 22031962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 318
Target Start/End: Complemental strand, 13969657 - 13969483
Alignment:
Q  150 tgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggc---gttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||  ||||||||| |||||||   |||||||||||||||| ||||    || ||||||||| |||||| |||||  |||||||||| ||||  |    
T  13969657 tgatttcatcgtcttagtgcgacgttgtgatgttcgtcgtctttgtgcggcattattttttgtctttattgttttgttcaagtatttgttcggttcaaat 13969558  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||| |||||||| ||||||||| ||||||||  |||||||||| ||||||| |||||| ||||||| ||||||    
T  13969557 tgtcaaatcagcttagatccagtgcagatccaatcaatgactttgacgtcgtcaacgttgcagatccggagacat 13969483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 2350732 - 2350923
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||||| |||||| ||||||| ||| || |||||||||||||||   ||| |||||| | |||||||| ||| | || |||||| ||||    
T  2350732 gtcttagtgcgacgttgttttgttggtcgtctctgtgcgacgttgtttgtcttttcccttttgttcaggtgtttgttcggttcggattgtcagattagct 2350831  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |  |||||||| | ||||||  ||||||||||||||| || |||||| |||||||||| ||| | |  | |||||| || ||||||||||||    
T  2350832 tcaatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatagctattccggagattttaatatagtcata 2350923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 318
Target Start/End: Complemental strand, 15276444 - 15276289
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-----tgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatc 263  Q
    |||||||||||||||||||||||||| ||  ||||||| | ||||     ||||||  |||| |||||| ||| ||||| || | |||||||||| ||||    
T  15276444 gacgttggtttgttcgtcgtctttgtgcgatgttgttttttttttcttcttgtttctctcaggtatttgatcggttcagattgtgagatcagcttcgatc 15276345  T
Q  264 cagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||||| ||||||||  ||||||||||||||| ||||||||| ||||| | ||||||    
T  15276344 cagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctggagacat 15276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 45659146 - 45659285
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa- 278  Q
    |||||||||||||| || ||||| |||| ||| |||||||  | || |||||| ||| ||||| || |||||||||||| ||||||||| ||||||||      
T  45659146 ttcgtcgtctttgtgcgacgttggttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 45659245  T
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    |||||||||| |||| || |||||||||||||||| ||||    
T  45659246 aatgactttgacgtcatctacgttgtagatccgaaaacat 45659285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 49651936 - 49652007
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    |||| ||||||||||   ||||| |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  49651936 ttattttgtgatttcgtcgtcttcgtgtgacgttcgtttgttcgtcgtctttgtacgacgttgtttgtcttt 49652007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 4564609 - 4564817
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||| ||||||||||| || |||||||||| ||| || ||||  |||| |||||| ||| ||    
T  4564609 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttagtcgtctttgtgcgacgttgtttgtttttcttatttctctcaggtatttgatcgctt 4564707  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| ||||||||| |||| |||  ||||||||||| ||| ||||| ||| ||||||| | ||| ||||| || |||||| || |    
T  4564708 cagattgtcagatcagcttcgatccagtgcagattcaatcaatgactttggtgtcatccacattgcagatccggaaaca-tggttattccggagatttaa 4564806  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  4564807 atatagtcata 4564817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 172 - 318
Target Start/End: Original strand, 36621474 - 36621623
Alignment:
Q  172 cgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgt 269  Q
    |||||||||||| ||||||||||| || | | |||||| ||| ||||||| ||||| |||||| ||| ||||| || ||| |||| ||| |||||||||     
T  36621474 cgttggtttgtttgtcgtctttgtgcgacatagtttgtttttcttgtttctttcaggtatttgatcggttcagattgtcacatcaactttgatccagtgc 36621573  T
Q  270 agatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||||||  |||||||||||| || ||||||||| ||||||| ||||||    
T  36621574 aaatccaatcaatgactttggcatcatccacgttgcagatccggagacat 36621623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 900245 - 900356
Alignment:
Q  202 ttgtttgtcttttt-gtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtcca 298  Q
    |||||||||||||| ||||||| ||||||| |||||| ||||| || ||| |||| ||| |||||||||  |||||||  |||||||||| |||| ||||    
T  900245 ttgtttgtcttttttgtttcgtccagatatctgttcggttcagattgtcatatcaactttgatccagtgcggatccaatcaatgactttgacgtcatcca 900344  T
Q  299 cgttgtagatcc 310  Q
    ||||||||||||    
T  900345 cgttgtagatcc 900356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 348
Target Start/End: Complemental strand, 630778 - 630597
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||||||||||||||||||| || ||||||| |||||| |||||||  |||  |||||| ||| |  || || ||||| |||||| ||||||||    
T  630778 gacgttggtttgttcgtcgtctttgtgcgacgttgttcgtctttcttgtttctctcaagtatttgatcggtcaagattgtcagaccagcttcgatccagt 630679  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    | ||||| ||  |||||||||| |||| ||||||||| ||| | | ||||| ||||| || |||||| || ||||||||||||    
T  630678 gcagatctaatcaatgactttgacgtcatccacgttgcagacctggagaca-tggttattccggagatttaaatatagtcata 630597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 289
Target Start/End: Original strand, 37662307 - 37662452
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttttt-gtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||| | |||||||||| ||||||| |||||| |||||||||||  || |||||||||||||||   || |||||||  ||||||| ||| || |    
T  37662307 ttgtgattttattgtcttagtgcgacgttgttttgtttgtcgtctttgtgaggtgttgtttgtctttttccatttgttcagacgtttgttcaattgagat 37662406  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttgg 289  Q
    | | |||||||||| |||| |||| ||||||||  |||||||||||    
T  37662407 tgttagatcagcttcgatctagtgcagatccaaccaatgactttgg 37662452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 347
Target Start/End: Complemental strand, 32539194 - 32539002
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttg-ttcgattcaggttttcagatcagc 257  Q
    ||||||||  |||||||||||||||||||||||||| || |||||||||| ||| |||||| || ||  |||||| || | ||||| || ||||||| ||    
T  32539194 gtcttagtacgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttattgttttgtccatgtatttgttttggttcagattgtcagatctgc 32539095  T
Q  258 tt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttc-ggagacttgaatatagtcat 347  Q
    || ||| ||||| | ||||||  |||||||||||||| |||||  ||| |||| || ||||||  ||  ||| ||| ||||||||||||||||    
T  32539094 ttcgattcagtgcaaatccaatcaatgactttggcgttgtccatattgcagattcggagacatgcgtatttcgggaaacttgaatatagtcat 32539002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 293
Target Start/End: Original strand, 34566785 - 34566932
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggtt 246  Q
    ||||||||||   ||||||||| |||  || |||||| ||||||||||| || |||||||||||||||   |  |||||  | |||||||||||||| ||    
T  34566785 ttgtgatttcgtcgtcttagtgcgaccctgttttgtttgtcgtctttgtgcgacgttgtttgtcttttccctg-gttcaagtgtttgttcgattcagatt 34566883  T
Q  247 ttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtc 293  Q
     ||||||||| || ||||||||| ||||||||  |||||||||||||||    
T  34566884 gtcagatcagtttcgatccagtgcagatccaaccaatgactttggcgtc 34566932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 46589279 - 46589354
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcag 256  Q
    |||||||||||||| ||||| ||||||||||| |||||||| |||  |||||||||| ||||| || |||||||||    
T  46589279 ttcgtcgtctttgtgcggcggtgtttgtctttcttgtttcgctcaagtatttgttcggttcagattgtcagatcag 46589354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 14265522 - 14265591
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||| ||| |||||| ||||||| ||||||  ||  | ||||||||||||||||||||||    
T  14265522 aatgactttggcgttgtcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcata 14265591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 10877457 - 10877509
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    |||||||| ||||||| ||||||||| ||||||||  ||||||||||||||||    
T  10877457 tcttagtgcgacgttgttttgttcgttgtctttgtgtggcgttgtttgtcttt 10877509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 26771319 - 26771407
Alignment:
Q  261 atccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||| ||||||||  ||| ||||||  |||||| |||||| ||||||||||||||   |  ||||||||||||||||||||||||    
T  26771319 atccagtgcagatccaatcaataactttgatgtcgtcaacgttgcagatccgaagacatgaatatttcggagacttgaatatagtcata 26771407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 348
Target Start/End: Complemental strand, 34659574 - 34659454
Alignment:
Q  230 tttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttc 327  Q
    |||||||| ||||| || ||| |||||||| |||||| || ||||||||  |||||||||||||||||| || ||| ||||||| ||| || |||  | |    
T  34659574 tttgttcggttcagattgtcatatcagcttagatccaatgcagatccaatcaatgactttggcgtcgtcaacattgcagatccggagatatgggtattcc 34659475  T
Q  328 ggagacttgaatatagtcata 348  Q
      |||||||||||||||||||    
T  34659474 aaagacttgaatatagtcata 34659454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 30853791 - 30853744
Alignment:
Q  162 cttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||| ||||||||||||||| |||| ||||| |||||||||||||    
T  30853791 cttagtgcgacgttggtttgttcatcgtgtttgtgcggcgttgtttgt 30853744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 51418222 - 51418260
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagaca 317  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  51418222 aatgactttggcgtcgtcaacgttgtagatccggagaca 51418260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 4870916 - 4870847
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||| ||||||||| |||||||||||||| ||||||  ||  |  |||||| ||||||||||||||    
T  4870916 aatgacttcggcgtcgtcaacgttgtagatccggagacatgagtattctggagacatgaatatagtcata 4870847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 10627237 - 10627306
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||| || |||||| |||| || ||||||  ||| || |||||||| ||||||||||||    
T  10627237 aatgactttggcgtcttcaacgttgcagattcggagacatgagttttttggagactttaatatagtcata 10627306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 12871853 - 12871922
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||| ||||| |||||| ||||||  ||||||  ||  | ||||||||||||||||||||||    
T  12871853 aatgactttggcatcgtcaacgttgcagatccagagacatgagtattccggagacttgaatatagtcata 12871922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 15391135 - 15391066
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||| | ||||||  ||  | ||||||| ||||||||||||||    
T  15391135 aatgactttggcgtcgtcaacgttgcagatctggagacatgagtattccggagacatgaatatagtcata 15391066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 32878940 - 32879009
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||| |||||| |||||||||||||| ||||||  ||  | || | |||||||||||||||||    
T  32878940 aatgactttggtgtcgtcaacgttgtagatccggagacatgagtattccgaaaacttgaatatagtcata 32879009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 38644819 - 38644686
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| ||| |||||||||||||||||||||| || | |||||||| ||| |||||||  |||| |||||| | |  |    
T  38644819 ttattttgtgatttcttcgtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgattggct 38644720  T
Q  241 caggttttcagatcagctt-gatccagtgtagat 273  Q
    ||| || ||||||||| || ||||||||| ||||    
T  38644719 cagattgtcagatcagtttcgatccagtgcagat 38644686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 40488414 - 40488325
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgtt 235  Q
    ||||||||||   ||||||||| ||||||| |||||| ||||||||||| || |||| | ||||||| |||||| || ||| ||||||||    
T  40488414 ttgtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttatctgtctttcttgtttagtccaggtatttgtt 40488325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 42276593 - 42276662
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| |||| || ||||||  ||  | ||||||| ||||||||||||||    
T  42276593 aatgactttggcgtcgtcaacgttgcagattcggagacatgagtattccggagacatgaatatagtcata 42276662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 45193511 - 45193442
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||| |||||||||||| |||||| ||||||| ||||||  ||  || |||||||| ||||||||||||    
T  45193511 aatgattttggcgtcgtcaacgttgcagatccggagacatgagtattttggagacttaaatatagtcata 45193442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 26097894 - 26097826
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    ||||||||| |||||||| || ||| ||||||| ||||||  ||| | ||| |||||||||||||||||    
T  26097894 aatgacttttgcgtcgtcaacattgcagatccggagacatgagttttccggtgacttgaatatagtcat 26097826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 7640378 - 7640169
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||||| |||||||  |||| |||||| ||| ||    
T  7640378 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 7640279  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||| || |||||||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| |||||| | |  | |||||| || ||    
T  7640278 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaa 7640179  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  7640178 tatagtcata 7640169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 171 - 347
Target Start/End: Complemental strand, 11550589 - 11550409
Alignment:
Q  171 acgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtg 268  Q
    |||||| |||||| ||||||||||| ||||||| ||||||||| ||||||||||||  |||||||||| ||||| || ||||| || ||| |||||||||    
T  11550589 acgttgttttgtttgtcgtctttgtgcggcgttttttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcagaacaacttagatccagtg 11550490  T
Q  269 tagatccaaa--aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    ||||||||||  |||||||||||||||||| |||||| |||||||||||||| |||  | | ||||||| |||| ||||||    
T  11550489 tagatccaaatcaatgactttggcgtcgtcaacgttgcagatccgaagacatgggtattacagagactttaatacagtcat 11550409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 150 - 348
Target Start/End: Original strand, 28228322 - 28228523
Alignment:
Q  150 tgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggtttt 248  Q
    |||||||  |||| ||||| || ||||||||||||||  ||||||| |||  |||||||||||| ||||||||||||  |||||||||| ||||| || |    
T  28228322 tgatttcgttgtcatagtgcgatgttggtttgttcgttatctttgtgcggttttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattgt 28228421  T
Q  249 cagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtca 346  Q
    || |||||||| |||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||  ||  ||| ||| ||||||||||||||    
T  28228422 catatcagctttgatccaatgcagatccaatcaatgactttggcgtcgcccacgttgtagatccgaagacatgagtatttcagaggcttgaatatagtca 28228521  T
Q  347 ta 348  Q
    ||    
T  28228522 ta 28228523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 19581006 - 19580815
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttttt-gtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||| ||| |||||||||||||||||| || |||||||||| ||||| |||| |||||| |||||||||||||||| || |||||||||||    
T  19581006 gtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttgttttttttgttttgttcaggtatttgttcgattcagattgtcagatcagct 19580907  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | ||||||||| | ||| ||  ||||||||||| || ||| |||||| ||||||| |||||| | |  | ||||||||| |||||| |||||    
T  19580906 tcgatccagtgcatatcaaatcaatgactttggagttgtcaacgttgcagatccggagacatggatattccggagacttaaatataatcata 19580815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 26491412 - 26491602
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||||| ||||||  ||||||||||  | |||||||||| ||| ||||||||||||| |||||||||||||||| || |||||||||||    
T  26491412 gtcttagtgcgacgttgttttgtttttcgtctttgtgtgacgttgtttgtgtttcttgtttcgttcag-tatttgttcgattcagattgtcagatcagct 26491510  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | |||| |||| ||||| ||  ||||||||||| |||||| |||||| ||||||| |||||| ||   | ||||||||| ||||||||||||    
T  26491511 tcgatctagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggcattccggagacttaaatatagtcata 26491602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 27024161 - 27023952
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| ||| |||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| || |||    
T  27024161 ttattttgtgatttcgtcgtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcaatt 27024062  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| ||||||||| ||||||||  ||||||||||| ||| ||||||||| ||||||| | ||| ||||| || |||||| || |    
T  27024061 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggagtcatccacgttgcagatccggataca-tggttattccggagatttaa 27023963  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  27023962 atatagtcata 27023952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 29734300 - 29734461
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt-ctttttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||||||||||| |||||| |||||| ||||||| |||||||||| ||| | ||||||||||   ||||||||||||||| || |||||||| ||    
T  29734300 gtcttagtgtgacgttgttttgtttgtcgtcgttgtacgacgttgtttgtccttctggtttcgttcaaggatttgttcgattcagattgtcagatcaact 29734399  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||||||||| ||||| ||  ||||||||||| |||||| |||||| ||||||| ||||||    
T  29734400 tcgatccagtgcagatcaaatcaatgactttggagtcgtcaacgttgaagatccggagacat 29734461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 44441493 - 44441573
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctt-tttgtttcgttcagatatttgttcgatt 240  Q
    |||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44441493 tcttagtgcgacgtttgtttgttcgtcgtcttcgtacggcgttgtttgtcttatttgtttcgttcagatatttgttcgatt 44441573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 10589205 - 10589396
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc- 257  Q
    ||||| ||| ||||||| |||||||||||||||||| || |||||||||||||| |||||| |||| | |||||||||| |||||  | ||||||||||     
T  10589205 gtctttgtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagagtgtcagatcagct 10589304  T
Q  258 ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||| ||||| ||  ||||||||||| ||| || |||||| ||||||| |||||  |||  | || |||||| ||||||||||||    
T  10589305 ttgatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaagggtattccgaagacttaaatatagtcata 10589396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 309
Target Start/End: Original strand, 25771537 - 25771707
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||    
T  25771537 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagtt 25771636  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatc 309  Q
    ||| || | |||||||||| ||||||||||||||||||  ||||| ||||||||| ||||||||| |||||    
T  25771637 cagattgttagatcagcttcgatccagtgtagatccaatcaatgattttggcgtcatccacgttgcagatc 25771707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 170 - 309
Target Start/End: Complemental strand, 27191330 - 27191189
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||||| || |||||||||||| ||||||||    
T  27191330 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagt 27191232  T
Q  268 gtagatccaaa-aatgactttggcgtcgtccacgttgtagatc 309  Q
    ||||||||||  ||||||||||||||| ||||||||| |||||    
T  27191231 gtagatccaatcaatgactttggcgtcatccacgttgcagatc 27191189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 170 - 309
Target Start/End: Complemental strand, 27841144 - 27841003
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||||| || |||||||||||| ||||||||    
T  27841144 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagt 27841046  T
Q  268 gtagatccaaa-aatgactttggcgtcgtccacgttgtagatc 309  Q
    ||||||||||  ||||||||||||||| ||||||||| |||||    
T  27841045 gtagatccaatcaatgactttggcgtcatccacgttgcagatc 27841003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 159 - 318
Target Start/End: Original strand, 37883762 - 37883924
Alignment:
Q  159 tgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc 257  Q
    |||||||||| ||||||| |||||||||||||||||| ||  ||||||||||||| |||||||||| |  |||||||||||||||| || ||| ||||||    
T  37883762 tgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgttgacgtatttgttcgattcagattgtcatatcagc 37883861  T
Q  258 -ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
     |||||||| || ||||| ||  ||||||||||| |||||| |||||| |||| || ||||||    
T  37883862 tttgatccaatgcagatcaaatcaatgactttggagtcgtcaacgttgcagatacggagacat 37883924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 7443581 - 7443416
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttt 247  Q
    |||||||| | ||||||||| ||||||| |||||||||||||||||| || |||||||||||||| |||||| |||| | |||||||||| ||||| ||     
T  7443581 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattg 7443482  T
Q  248 tcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    | ||||||||||  |||||||| ||||| ||  ||||||||||| ||| || |||||| |||||||    
T  7443481 taagatcagcttcaatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccg 7443416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 346
Target Start/End: Original strand, 13268682 - 13268871
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttttt-gtttcgttcagatatttgttcgattcaggttttcagatcagc- 257  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||||||||||||| |||||||  || ||||| |||||||||| || |||||||| |     
T  13268682 gtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttttcgtttcgtctaggtatttattcgattcagattgtcagatcaact 13268781  T
Q  258 ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtca 346  Q
    |||||||| || | ||||||  || |||||||||||| || |||||| |||||||  |||||  ||  | | ||||||||||||||||||    
T  13268782 ttgatccaatgcatatccaatcaacgactttggcgtcttcaacgttgaagatccggggacatgagtattccagagacttgaatatagtca 13268871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 43929304 - 43929143
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| |||||||||||||||||||||||||| || |||||||||||||| |||||||  |||| |||||| ||| ||||| || | ||||||| |    
T  43929304 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctatcaggtatttgatcggttcagattgttagatcagtt 43929205  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | |||| |||| |||| |||  ||||||||||||||| ||||||||| ||||||| ||||||    
T  43929204 tcgatcaagtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggagacat 43929143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 11931006 - 11931102
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc-tttttgtttcgttcagatatttgttcg 237  Q
    |||| |||||||||||  ||||||||||||||||||||||||||| ||||| ||| || |||||||||| ||||||||||||| |||||||||||||    
T  11931006 ttattttgtgatttcatcgtcttagtgtgacgttggtttgttcgttgtcttcgtaaggagttgtttgtcttttttgtttcgtttagatatttgttcg 11931102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 183 - 348
Target Start/End: Complemental strand, 15673949 - 15673781
Alignment:
Q  183 tcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-aa 279  Q
    ||||||||||||| || |||||||||||||| ||||||||||||| | |||||||||||||| || ||| |||||||| |||||||| |||||| ||  |    
T  15673949 tcgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtttttgttcgattcagattgtcatatcagcttcgatccagtatagatcaaatca 15673850  T
Q  280 atgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||| |||||| | |||| ||||| | |||||| | |  | ||||||||| ||||||||||||    
T  15673849 atgactttggagtcgtcaatgttgcagatctggagacatggatattccggagacttaaatatagtcata 15673781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 276
Target Start/End: Complemental strand, 16879987 - 16879851
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    ||||||||||||||||  ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  16879987 ttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggtt 16879888  T
Q  241 caggttttcagatcagctt-gatccagtgtagatcca 276  Q
    ||| || |||||||| ||| ||||||||| |||||||    
T  16879887 cagattgtcagatcaacttcgatccagtgcagatcca 16879851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 276
Target Start/End: Complemental strand, 16992120 - 16991984
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    ||||||||||||||||  ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  16992120 ttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggtt 16992021  T
Q  241 caggttttcagatcagctt-gatccagtgtagatcca 276  Q
    ||| || |||||||| ||| ||||||||| |||||||    
T  16992020 cagattgtcagatcaacttcgatccagtgcagatcca 16991984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 44951529 - 44951648
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||||||| ||| |||||||  |||| |||||| ||| ||||| || |||||||||||    
T  44951529 gtcttcgtgcgacgttggtttgttcgtcgtctttgtacgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagct 44951628  T
Q  259 t-gatccagtgtagatccaa 277  Q
    | ||||||||| ||||||||    
T  44951629 tcgatccagtgcagatccaa 44951648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 43566966 - 43567174
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||  ||| ||    
T  43566966 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgctt 43567064  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| ||||||||| ||||||||  ||||||||||| ||| ||||||||| ||||||| | ||| ||||| || |||||| || |    
T  43567065 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggtgtcatccacgttgcagatccggaaaca-tggttattccggagatttaa 43567163  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  43567164 atatagtcata 43567174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 25516585 - 25516793
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||||||||||||||| || | |||||||| ||| |||||||  |||| |||||| ||| ||    
T  25516585 ttattttgtgatttcttcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgctt 25516683  T
Q  241 caggttttcagatcagcttga-tccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||| || |||||||||||| | ||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| | |||| | |  | |||||| || ||    
T  25516684 cagattgtcagatcagcttcaatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggctattccggagatttaaa 25516783  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  25516784 tatagtcata 25516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 25623049 - 25622857
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt--ttgtttcgttcagatatttgttcgattcaggttttcagatcagc 257  Q
    ||||||||| ||| ||| |||||||||||||||||| |||||||||||||||||  ||||||   |||| ||||| |||| ||||| || ||| ||||||    
T  25623049 gtcttagtgcgacattgttttgttcgtcgtctttgtgcggcgttgtttgtctttccttgttttactcaggtattttttcggttcagattgtcatatcagc 25622950  T
Q  258 tt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    || ||| ||||| |||| |||  |||||||||| ||||||| |||||  |||| |||||||||  ||  | ||||||||| ||||||||||||    
T  25622949 ttagattcagtgcagattcaatcaatgactttgacgtcgtcaacgttacagattcgaagacatgagtattccggagactttaatatagtcata 25622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 348
Target Start/End: Complemental strand, 2251362 - 2251160
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggtt 246  Q
    ||||||||||   ||||||||| |||| || |||||| ||||||||||| || |||||||||||||||   || ||| || | ||||||| |||||| ||    
T  2251362 ttgtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcgacgttgtttgtcttttccctt-gttgaggtgtttgttcaattcagatt 2251264  T
Q  247 ttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatag 343  Q
     |||||||||||| ||||||||| | ||||||  ||||||||||||||| || |||||| |||||||||| || ||||| || |||||| || |||||||    
T  2251263 gtcagatcagcttcgatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggca-tggttattccggagattttaatatag 2251165  T
Q  344 tcata 348  Q
    |||||    
T  2251164 tcata 2251160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 20036532 - 20036680
Alignment:
Q  200 cgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtc 296  Q
    |||||||||||||| ||||||||||||| |||||||||  ||||| || ||||||  |||| ||||||||| ||||||||  ||||||||||||| ||||    
T  20036532 cgttgtttgtctttcttgtttcgttcaggtatttgttcagttcagattgtcagattggcttcgatccagtgcagatccaatcaatgactttggcgccgtc 20036631  T
Q  297 cacgttgtagatccgaagacattggttcttcggagacttgaatatagtc 345  Q
     |||||| |||||||||||||| |||  | || ||||||| ||||||||    
T  20036632 aacgttgcagatccgaagacatgggtattccgtagacttggatatagtc 20036680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 36508022 - 36508193
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| |||||| |||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||    
T  36508022 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgttgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcactt 36508120  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||| || |||||||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| |||||||    
T  36508121 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 36508193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 311
Target Start/End: Complemental strand, 44167732 - 44167561
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||||||||||||||| || |||||||||| ||| |||||||| |||| |||||| ||| ||    
T  44167732 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttcgctcagctatttgatcgctt 44167634  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||  || ||||||||||||  |||||||| ||||||||  |||||||||| |||| ||||||||| |||||||    
T  44167633 caaattgtcagatcagcttcaatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccg 44167561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 3603077 - 3603286
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  ||||| ||| |||||||||||||||||||||||||| || |||||||||| |  ||||||||  ||||||||||| ||  ||    
T  3603077 ttattttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttggtttgtttctctcagatatttgatccgtt 3603176  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||  ||   | |||| ||| ||||||||| ||||||||  |||||||||| |||| |||| |||| ||||||||||||| ||||| || |||||| || |    
T  3603177 caaattgctatatcaacttcgatccagtgcagatccaatcaatgactttgacgtcatccatgttgcagatccgaagaca-tggttattccggagatttaa 3603275  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  3603276 atatagtcata 3603286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 24500597 - 24500713
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||| ||  |||||||||||||||||| || |||||||||||||| |||||| |||||  |||||||||| ||||| || |||||||||||    
T  24500597 gtcttagtgcgaccttattttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagattatcagatcagct 24500696  T
Q  259 t-gatccagtgtagatc 274  Q
    | ||||||||| |||||    
T  24500697 tcgatccagtgcagatc 24500713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 41176970 - 41177129
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||| ||| |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||  |||||| ||| ||||  || ||||||||||||    
T  41176970 tcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcaaattgtcagatcagctt 41177068  T
Q  260 -gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
     ||||||||| ||||||||  ||||||||||||||| ||||||||| |||| |||| ||||    
T  41177069 cgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagattcgaaaacat 41177129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 348
Target Start/End: Original strand, 3465061 - 3465230
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-a 278  Q
    |||||||||||||| || |||||||||| ||| |||||||  |||  |||||| ||| ||||| || |||||||||||| ||||||||| ||||||||      
T  3465061 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagatccaatc 3465160  T
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||| ||||||||| ||||||||| ||||||  | |||| | |  |||||||| || ||||||||||||    
T  3465161 aatgattttggcgtcatccacgttgcagatccagaaacatggttatttcggagatttaaatatagtcata 3465230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 4878740 - 4878624
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| || |||| |||||||||||||||||| || |||||||||||||| ||| |||||| || |||||||||| ||||| || ||| |||||||    
T  4878740 gtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcagct 4878641  T
Q  259 t-gatccagtgtagatc 274  Q
    | ||||||||| |||||    
T  4878640 tcgatccagtgcagatc 4878624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 303
Target Start/End: Complemental strand, 25237330 - 25237189
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    ||||||||| ||||||| |||||||||||||||||| || | |||||||    ||| |||||||| | |||||||||||||||||||  |||||||||||    
T  25237330 gtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacattgtttg----tttttttcgttcgggtatttgttcgattcaggttgccagatcagctt 25237235  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttg 303  Q
      |||||||| |||| |||  ||||||||| | |||||| ||||||    
T  25237234 caatccagtgcagattcaatcaatgacttttgagtcgtcaacgttg 25237189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 318
Target Start/End: Original strand, 5930515 - 5930694
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| || ||||||||||||||||| ||||| || |||||||||| ||| |||||||  |||  |||||| ||| ||    
T  5930515 ttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtttttgtgcgacgttgtttgtttttcttgtttctatcatgtatttgatcggtt 5930614  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| || | |||||||||| ||||||||| ||||||||  ||||| ||||| ||  ||||||||| ||||||| ||||||    
T  5930615 cagattgtgagatcagcttcgatccagtgcagatccaatcaatgattttggtgttatccacgttgcagatccggagacat 5930694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 346
Target Start/End: Complemental strand, 9715566 - 9715359
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||||||   |||||| |||||| ||| ||||||| |||| |||||||||||| ||||||||||||| |||||||| | ||    
T  9715566 ttattttgtgatttcgtcgtcttagtacaacgttgatttgtttgtcatctttgtgcggcattgtttgtctttcttgtttcgttcaggtatttgtttggtt 9715467  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||  || ||| ||||| ||  |||||||| | ||||||  ||||||||||||||  ||||||||||| ||||  |||||| | |  | || |||||||||    
T  9715466 caaattgtcatatcagattcaatccagtgcatatccaatcaatgactttggcgttctccacgttgtaaatccagagacatagatattccgcagacttgaa 9715367  T
Q  339 tatagtca 346  Q
    ||||||||    
T  9715366 tatagtca 9715359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 17068919 - 17068729
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||  | ||||| |||  || |  || | |||||||||    
T  17068919 gtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattc-ctttaaattgttagatcagct 17068821  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |  |||||||| ||||| ||| ||||| |||| ||||||| |||||| | ||||| |||||| |||  ||| ||  ||||||||||||||||    
T  17068820 tcaatccagtgcagatcaaaacaatgattttgacgtcgtcgacgttgcatatccgtagacatgggtatttcagaagcttgaatatagtcata 17068729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 3390524 - 3390687
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattc 241  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||        ||||||||  |||| |||||| ||  |||    
T  3390524 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttg--------tttgtttctctcaggtatttgatcagttc 3390615  T
Q  242 aggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    || || |||||| ||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| |||||||    
T  3390616 agattgtcagataagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 3390687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 38822165 - 38822373
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  38822165 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgctt 38822263  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| ||  |||||  |||| ||||||||| ||||||||  |||||||||| |||| |||| |||| ||||||| | ||| ||||| || |||||| || |    
T  38822264 cagattgccagatttgcttcgatccagtgcagatccaatcaatgactttgacgtcatccatgttgcagatccggaaaca-tggttattccggagatttaa 38822362  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  38822363 atatagtcata 38822373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 40125500 - 40125598
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||  |||||| ||||||  |||||||||| || |||| ||||||||| ||||||||||||| ||||| |||||||||| || |||||||||||    
T  40125500 tcttagtgcaacgttgttttgtttttcgtctttgtgcgacgttctttgtctttcttgtttcgttcaggtatttattcgattcagattgtcagatcagct 40125598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 41842045 - 41842111
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    ||||||||||   ||||||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  41842045 ttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgctgcgttgtttgtcttt 41842111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 311
Target Start/End: Complemental strand, 5071373 - 5071220
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    ||||||||  |||||| |||||| ||||||||||| || | ||||||||||||| | | | |||||| | |||||||| ||||| || |||||||| |||    
T  5071373 tcttagtgcaacgttgttttgtttgtcgtctttgtgcgactttgtttgtcttttctctcttgttcaggtgtttgttcggttcagattgtcagatcaactt 5071274  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
     |||| |||||||||||||   |||||||||||||| || |||||| |||||||    
T  5071273 cgatctagtgtagatccaaccgatgactttggcgtcatcaacgttgcagatccg 5071220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 17118818 - 17118753
Alignment:
Q  159 tgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgtt 223  Q
    |||||||||| ||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  17118818 tgtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtt 17118753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 303
Target Start/End: Original strand, 19953680 - 19953825
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||  |||||||  ||||| ||||||||||| ||||||||||||||||| |||||| |||||  |||||||||| ||||| || |||||||| ||    
T  19953680 gtcttagtacgacgttgtgttgtttgtcgtctttgtgcggcgttgtttgtctttcttgttttgttcaagtatttgttcggttcagattgtcagatcatct 19953779  T
Q  259 t-gatccagtgtagatccaaaaatgactttggcgtcgtccacgttg 303  Q
    |  ||||| || ||||| |  |||||||||| ||| ||| ||||||    
T  19953780 taaatccaatgcagatcaatcaatgactttgacgttgtcaacgttg 19953825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 29812618 - 29812458
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||| | |||||||||||||||||| ||| ||||||| ||||| ||||||| ||||| ||| |||||| ||| | || | | ||||| |    
T  29812618 gtcttagtgcgacgt-gttttgttcgtcgtctttgtgcggtgttgtttttctttcttgtttcattcaggtatgtgttcggttcggattgttatatcagtt 29812520  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||||||||| ||||||||  ||||| |||||  ||||| |||||| ||||||||||||||    
T  29812519 tagatccagtgcagatccaatcaatgattttggaatcgtcaacgttgcagatccgaagacat 29812458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 44942524 - 44942593
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||||||||||  ||  | ||||||||||||||||||||||    
T  44942524 aatgactttggcgtcgtcaacgttgcagatccgaagacatgagtattccggagacttgaatatagtcata 44942593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 6089983 - 6090154
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| || ||||||| |||| || ||||||| || |||||||||| ||| |||||||  ||||||||||| ||| ||    
T  6089983 ttattttgtgatttcgtcgtcttcgtgcgatgttggtt-gttcatcttctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcgctt 6090081  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||| || |||||||||||| ||||||||| | ||||||  ||||||||| | ||| ||||||||| |||||||    
T  6090082 cagattgtcagatcagcttcgatccagtgcatatccaatcaatgactttagtgtcatccacgttgcagatccg 6090154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 348
Target Start/End: Complemental strand, 42105727 - 42105579
Alignment:
Q  201 gttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtcca 298  Q
    ||||||||| || ||||||||||||| |||||||||||||||  || ||| |||||||| ||| ||||| ||||| ||  ||||||||||| || ||| |    
T  42105727 gttgtttgttttgttgtttcgttcaggtatttgttcgattcaaattgtcaaatcagcttcgattcagtgcagatcaaatcaatgactttggagttgtcaa 42105628  T
Q  299 cgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    ||||| |||| |||||||| ||||| || ||||||||| |||||| |||||    
T  42105627 cgttgcagat-cgaagaca-tggttattccggagacttaaatataatcata 42105579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 16720852 - 16720699
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc- 257  Q
    ||||| ||| |||||| |||||||||||||||||||  | |||||||||| ||| ||||| | ||||| |||||||||| ||||| || ||| ||||||     
T  16720852 gtctttgtgcgacgttagtttgttcgtcgtctttgtgtgacgttgtttgtttttcttgttactttcaggtatttgttcggttcagattatcaaatcagct 16720753  T
Q  258 ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatcc 310  Q
    ||||||  ||| ||||||||  || || |||||| || ||||||||| ||||||    
T  16720752 ttgatctcgtgcagatccaatcaacgattttggcttcatccacgttgcagatcc 16720699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 17074916 - 17074852
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgtt 223  Q
    ||||||||| ||||||| ||||| |||||||||||| ||| ||||||||||| ||||||||||||    
T  17074916 gtcttagtgcgacgttgttttgtccgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtt 17074852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 10589177 - 10589224
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||    
T  10589177 gtcttagtgtgacgttgttttgttcgtcgtctttgtgcgacgttgttt 10589224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 15071566 - 15071500
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    ||||||| |||  ||||||||  ||||||  ||||||||||||||||||||| ||||||||||||||    
T  15071566 ttgtgatatcatggtcttagtacgacgttattttgttcgtcgtctttgtacgtcgttgtttgtcttt 15071500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 348
Target Start/End: Complemental strand, 3397921 - 3397792
Alignment:
Q  221 gttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    |||||| | ||||||| |||||| || |||||||| ||| ||||||||| |||| |||  ||||||||||||||| || || ||| ||||||| ||||||    
T  3397921 gttcaggtgtttgttcaattcagattgtcagatcatcttcgatccagtgcagattcaaccaatgactttggcgtcatcaacattgcagatccggagacat 3397822  T
Q  319 tggttcttcggagacttgaatatagtcata 348  Q
     | |  |||||||| || ||||||||||||    
T  3397821 ggctatttcggagattttaatatagtcata 3397792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 4732308 - 4732377
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||| |||||||| |||||| ||||||| ||||||  ||  | ||||||||||||||||||||||    
T  4732308 aatgactttagcgtcgtcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcata 4732377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 13878892 - 13878823
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| |||||||  |||||  || |||| ||||||| ||||||||||||    
T  13878892 aatgactttggcgtcgtcaacgttgcagatccggggacatgagtacttcagagacttaaatatagtcata 13878823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 14019017 - 14018948
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| |||||||  |||||  || |||| ||||||| ||||||||||||    
T  14019017 aatgactttggcgtcgtcaacgttgcagatccggggacatgagtacttcagagacttaaatatagtcata 14018948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 15920106 - 15920175
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| | ||||  ||  |||| |||||||||||||||||||    
T  15920106 aatgactttggcgtcgtcaacgttgcagatccggaaacatgagtatttcgaagacttgaatatagtcata 15920175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 29543031 - 29543100
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||| ||||||||| || |||||| ||||||| |||||| |||  ||||||||| ||||||||||||||    
T  29543031 aatgattttggcgtcatcaacgttgcagatccggagacatgggtatttcggagacatgaatatagtcata 29543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 34480197 - 34480266
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||| ||||||||| ||||||| ||||||  ||  | ||| ||||||||||||||||||    
T  34480197 aatgactttggcgtcatccacgttgcagatccggagacatgagtattccggcgacttgaatatagtcata 34480266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 17095489 - 17095425
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgtt 223  Q
    ||||| ||| ||||||| |||||||||||||||||| | | ||||||||||| ||||||||||||    
T  17095489 gtctttgtgcgacgttgttttgttcgtcgtctttgtgcagtgttgtttgtcttttttgtttcgtt 17095425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 34962959 - 34962920
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  34962959 aatgactttggcgtcgtcaacgttgcagatccgaagacat 34962920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 44562629 - 44562582
Alignment:
Q  166 gtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    |||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  44562629 gtgtgatgttggtttgttcgtcgtctttgtgcggtgttgtttatcttt 44562582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 18141363 - 18141294
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    ||||||||||||||| ||||||||| ||||||| ||||| ||||| || |||||| || ||||||||||||    
T  18141363 aatgactttggcgtcctccacgttgcagatccggagaca-tggttattccggagatttaaatatagtcata 18141294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 5754520 - 5754589
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||| |||||| |||||| ||||||| ||||||  ||  | ||||||| ||||||||||||||    
T  5754520 aatgactttggtgtcgtcaacgttgcagatccggagacataagtattccggagacatgaatatagtcata 5754589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 43696106 - 43696175
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||| || |||||| ||||||||||||||  ||  | || |||| ||||||||||||||    
T  43696106 aatgactttggcgtcatcaacgttgcagatccgaagacatgagtattccgaagacatgaatatagtcata 43696175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 318
Target Start/End: Complemental strand, 7581973 - 7581937
Alignment:
Q  282 gactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  7581973 gactttgacgtcgtcaacgttgtagatccgaagacat 7581937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 147 - 348
Target Start/End: Original strand, 20270811 - 20271015
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||||||| |||||||||||||||||| || ||||||||| |||| ||||||||||||| |||||||||| ||||| |    
T  20270811 ttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagat 20270910  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | ||||||||||||  |||||||| ||||| ||  ||||||||||| ||| || |||||| ||||||| |||||| | |  ||||||||||| |||||||    
T  20270911 tgtcagatcagcttcaatccagtgcagatcaaatcaatgactttggagtcttcaacgttgcagatccggagacatggatatttcggagacttaaatatag 20271010  T
Q  344 tcata 348  Q
    |||||    
T  20271011 tcata 20271015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 41554597 - 41554788
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||| ||| ||| ||||||||| |||| || |||||||||||||| |||||||| |||| |||||||||| ||||| || |||||||||||    
T  41554597 gtcttagtgcgaccttgttttattcgtcgtccttgtgcgacgttgtttgtctttcttgtttcgctcaggtatttgttcggttcagattgtcagatcagct 41554696  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | ||||||||| ||||| ||  |||||||||||  ||||| |||||| ||||||| |||||| |||  | ||||||||| ||||||||||||    
T  41554697 tcgatccagtgcagatcaaatcaatgactttggaatcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcata 41554788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 348
Target Start/End: Complemental strand, 18472742 - 18472539
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||||||| ||| ||||||| |||||||||| || |||||||||||||| ||||||| ||||| |||||||||||||||| |    
T  18472742 ttgtgatttcgtcgtcttagtgtgactttg-tttgttcctcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagat 18472644  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | |||||||| ||| ||||||||| ||||| ||  ||||||||||  |||||| |||||||||||| | ||||||  ||  | |||||||||  ||||||    
T  18472643 tgtcagatcaacttcgatccagtgcagatcaaatcaatgactttgtagtcgtcaacgttgtagatctggagacatgagtattccggagacttacatatag 18472544  T
Q  344 tcata 348  Q
    |||||    
T  18472543 tcata 18472539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 348
Target Start/End: Complemental strand, 33486586 - 33486382
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || |||||||||||||| ||||||||||||  |||||||||| ||||| |    
T  33486586 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaagtatttgttcggttcagat 33486487  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | ||| |||||||| ||||||||| ||||| ||  ||||||||||| |||||| |||||| ||||||| || ||| |||  |  |||||||| ||||| |    
T  33486486 tgtcaaatcagcttcgatccagtgcagatcaaaccaatgactttggagtcgtcaacgttgcagatccggaggcatgggtattctggagacttaaatatgg 33486387  T
Q  344 tcata 348  Q
    |||||    
T  33486386 tcata 33486382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 40774870 - 40775062
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgt-ttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc 257  Q
    ||||||||| ||||||| ||||| |||||||||||| |  | |||| |||||||| ||||||||||||| |||||||||| ||||| || ||||||||||    
T  40774870 gtcttagtgcgacgttgttttgtccgtcgtctttgtgcaaccttgtattgtctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagc 40774969  T
Q  258 tt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    || ||||||||||||||| ||  ||||||||||| ||| || |||||| ||||||| |||||| |||  | |||| |||| ||||||||||||    
T  40774970 ttcgatccagtgtagatcaaatcaatgactttggagtcttcaacgttgcagatccggagacatgggtattccggaaacttaaatatagtcata 40775062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 147 - 348
Target Start/End: Complemental strand, 22397565 - 22397365
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||||||| |||||||||||||||||| || | |||||||||||| || |||||||||| |||||||||||||||| |    
T  22397565 ttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacattgtttgtctttcttatttcgttcaggtatttgttcgattcagat 22397466  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | |||||||||||| |||| |||| ||||| ||  ||||||||||| ||||||    ||| ||||| | |||||||| |  | ||||||||| |||||||    
T  22397465 tgtcagatcagcttcgatctagtgcagatcaaatcaatgactttggagtcgtc----ttgcagatctggagacattgatattccggagacttaaatatag 22397370  T
Q  344 tcata 348  Q
    |||||    
T  22397369 tcata 22397365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 29310376 - 29310167
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||    
T  29310376 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagtt 29310277  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||  || |||||||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| | ||| ||||| || |||||| || |    
T  29310276 caaattatcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggataca-tggttattccggagatttaa 29310178  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  29310177 atatagtcata 29310167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 8812166 - 8811965
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttt 247  Q
    |||||||| | ||||||||| ||||||| ||||||||||||||||||  || ||||||||||||| |||||| |||| | |||||||||| ||||| ||     
T  8812166 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgt-gggagttgtttgtctttcttgttttgttcgggtatttgttcggttcagattg 8812068  T
Q  248 tcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtc 345  Q
    |||||||||||| | ||||||| ||||| ||  ||||||||| | ||| || |||||| ||||| | ||||| ||||  | ||||||||| |||||||||    
T  8812067 tcagatcagcttcggtccagtgcagatcaaatcaatgactttagagtcatcaacgttgcagatctggagacaatggtattccggagacttaaatatagtc 8811968  T
Q  346 ata 348  Q
    |||    
T  8811967 ata 8811965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 348
Target Start/End: Complemental strand, 6647895 - 6647726
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-a 278  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||| |||||||||| ||||| || |||| ||||||| |||| |||| ||||||||      
T  6647895 ttcgtcgtctttgtgcggcgttgtttgtctttcttgttttattcagctatttgttcggttcagattgtcaggtcagcttagatcaagtgcagatccaatc 6647796  T
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||| |||||| || |||||| ||||||| |||||| | |  | ||||||||| ||||||||||||    
T  6647795 aatgacttcggcgtcatcaacgttgcagatccggagacatggatattccggagactttaatatagtcata 6647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 4726950 - 4726771
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| || ||||||| ||||||||||||||| || |||||||||||||| |||||||  |||| |||||| ||| ||    
T  4726950 ttattttgtgatttcgtcgtcttcgtgcgatgttggttagttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 4726851  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| || ||||||||||||  |||||||| ||||||||  ||||||||||| ||| || |||||| ||||||| ||||||    
T  4726850 cagattgtcagatcagcttcaatccagtgcagatccaatcaatgactttggtgtcatctacgttgcagatccggagacat 4726771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 348
Target Start/End: Original strand, 4070672 - 4070852
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||||| || |||||||||||| |||| |||    
T  4070672 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgtttcagattgtcagatcagcttcgatctagt 4070770  T
Q  268 gtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    | ||||||||  ||||||||||||||| ||||||||| ||||||| | ||| ||||| || |||||| || ||||||||||||    
T  4070771 gcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaaca-tggttattccggagatttaaatatagtcata 4070852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 31645921 - 31646130
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctt-tttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||  |||||||  |||| |||||| ||  ||    
T  31645921 ttattttgtgatttcttcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcagtt 31646020  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||| ||| ||||||||| ||||||||  ||||||||||| ||| ||||||||| ||||||| | ||| ||||| || |||||| || |    
T  31646021 cagattgtcagatcaacttcgatccagtgcagatccaatcaatgactttggtgtcatccacgttgcagatccggataca-tggttattccggagatttaa 31646119  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  31646120 atatagtcata 31646130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 318
Target Start/End: Original strand, 2415520 - 2415671
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtc-tttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    ||||||||||||||||| |||||||| || | ||||||||| |||||||| | ||||| |||||||||| ||||| || |||||||||||| ||||||||    
T  2415520 gacgttggtttgttcgttgtctttgtgcgacattgtttgtcttttttgttactttcaggtatttgttcggttcagattgtcagatcagcttcgatccagt 2415619  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | |||| |||  || ||||||  | || ||||||||| ||||||||||||||    
T  2415620 gcagattcaatcaacgactttaacttcatccacgttgcagatccgaagacat 2415671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 6887195 - 6887028
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| ||| |||  |||| |||||| ||  ||||| |    
T  6887195 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgcttctctcaggtatttgatcagttcagat 6887096  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    | | |||| ||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| |||||||    
T  6887095 tgttagattagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 6887028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 344
Target Start/End: Complemental strand, 9034964 - 9034759
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  ||||| ||| ||||||||||||||| |||||||||| || | |||| ||||||| |||||||  |||| |||||| ||| ||    
T  9034964 ttattttgtgatttcatcgtcttcgtgcgacgttggtttgttcctcgtctttgtgcgacattgtctgtctttcttgtttctctcaggtatttgatcggtt 9034865  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||| || ||||||||| || |||| |||| ||||||||  ||||||||||| ||| | || |||| |||||| ||||||| | |  |||||||| || ||    
T  9034864 cagattgtcagatcagtttcgatctagtgcagatccaatcaatgactttggggtcattcatgttgcagatccaaagacatggttatttcggagatttaaa 9034765  T
Q  339 tatagt 344  Q
    ||||||    
T  9034764 tatagt 9034759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 28618695 - 28618903
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| |||| |||||||||| || |||| ||||| ||| |||||||  |||| |||||| ||| ||    
T  28618695 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcatcgtctttgtgcgacgttatttgtttttcttgtttctctcaggtatttgatcgctt 28618793  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
     || || |||||||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| | |||| | |  |||||| | || ||    
T  28618794 tagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttatttcggaaatttaaa 28618893  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  28618894 tatagtcata 28618903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 348
Target Start/End: Complemental strand, 19646028 - 19645855
Alignment:
Q  177 gtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatc 274  Q
    ||||||| |||||||||||  | |||||||||||||| ||||||| || |  |||||||| ||||||| || ||||||||| || |||| |||| |||||    
T  19646028 gtttgtttgtcgtctttgtgtgacgttgtttgtctttcttgtttctttgaagtatttgttagattcagattgtcagatcagattcgatcaagtgcagatc 19645929  T
Q  275 caa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    |||  ||||||||||| ||| ||||||||| | ||||||||||| ||||| || |||||| |||||||||||||||    
T  19645928 caatcaatgactttggtgtcatccacgttgca-atccgaagaca-tggttattccggagatttgaatatagtcata 19645855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 34844046 - 34844165
Alignment:
Q  180 tgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa 277  Q
    |||| ||| ||||| |||| ||||||||||||||| |||||||||||| |||||| ||||||||| || |||||||||||| ||||||||| ||||| ||    
T  34844046 tgtttgtcatctttatacgacgttgtttgtcttttttgtttcgttcaggtatttgctcgattcagattgtcagatcagcttcgatccagtgcagatcaaa 34844145  T
Q  278 -aaatgactttggcgtcgtc 296  Q
      ||||||||||| ||||||    
T  34844146 tcaatgactttggagtcgtc 34844165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 34866537 - 34866620
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattca 242  Q
    ||||||||| ||||||  ||||||||||||||||||||||||| |||| ||||| || |||| |||||||||||||||||||||    
T  34866537 gtcttagtgcgacgttattttgttcgtcgtctttgtacggcgtagtttatctttcttttttcattcagatatttgttcgattca 34866620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 15710653 - 15710771
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||||||| ||||||| || |||||| ||||||||  |||||||||||||||| ||||||||||||| |||||||||| |||   || ||||||||||||    
T  15710653 tcttagtgcgacgttgtttcgttcgttgtctttgtgtggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttcgaattgtcagatcagctt 15710752  T
Q  260 -gatccagtgtagatccaa 277  Q
     |||| |||| ||||||||    
T  15710753 agatctagtgcagatccaa 15710771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 34873971 - 34874132
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    |||||| || || |||| ||| |||||| |||||||  |||||||||||||||| ||||||| ||||||||||| | |||||||  || ||| |||| ||    
T  34873971 gtcttaatgcgatgttgttttattcgtcatctttgtgtggcgttgtttgtctttcttgtttctttcagatatttatccgattcaaattgtcatatcaact 34874070  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | |||| |||| ||||||||  |||||||||||||||||| |||||| | ||||| ||||||    
T  34874071 tcgatctagtgcagatccaatgaatgactttggcgtcgtcaacgttgcatatccggagacat 34874132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 348
Target Start/End: Original strand, 35906401 - 35906570
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa- 278  Q
    |||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||||| || || ||||||||| ||||||||| ||||||||      
T  35906401 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattatcggatcagcttcgatccagtgcagatccaatc 35906500  T
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||| ||||| ||| ||||||| | |||| | |  |||||||| || ||||||||||||    
T  35906501 aatgactttggcgtcatccacattgcagatccggatacatggttatttcggagatttaaatatagtcata 35906570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 41988262 - 41988362
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc-tttttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||||| |||||| ||||||||||| |||| ||||||||| ||||||||||||| |  |||||||| | |||||||| ||| |||||||    
T  41988262 gtcttagtgcgacgttgttttgtttgtcgtctttgtgcggctttgtttgtcttttttgtttcgtttaagtatttgtttgtttcaggttgtcatatcagct 41988361  T
Q  259 t 259  Q
    |    
T  41988362 t 41988362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 318
Target Start/End: Original strand, 5378426 - 5378573
Alignment:
Q  174 ttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtag 271  Q
    |||||||||||||||||||||| || | ||| |||||||| |||||||  |||||| |||| ||| ||||| || || |||||| || |||||| || ||    
T  5378426 ttggtttgttcgtcgtctttgtgcgacattgcttgtctttcttgtttctctcagatgtttgatcggttcagattgtcggatcagtttcgatccaatgcag 5378525  T
Q  272 atccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| ||  ||||||||||||||| ||||||||| ||||||| ||||||    
T  5378526 atcaaatcaatgactttggcgtcatccacgttgcagatccggagacat 5378573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 13007802 - 13007992
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||||||||  |||||| ||| |||||||||||||| || |||||||||||||| |  |||| |||| ||||||||||  |||  || ||| ||||||||    
T  13007802 gtcttagtgcaacgttgttttattcgtcgtctttgtgcgacgttgtttgtctttcttgttcgctcaggtatttgttcggatcaaattatcatatcagctt 13007901  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
      |||||| | | ||||||  | ||||||| ||||| || |||||||||||||| || ||| |||  | ||||||||||||||| ||||||    
T  13007902 aaatccagggcatatccaatcattgacttttgcgtcatcaacgttgtagatccggagtcatgggtattccggagacttgaatattgtcata 13007992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 348
Target Start/End: Complemental strand, 28389103 - 28388921
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtc-tttttgtttcgttc-agatatttgttcgattcaggttttcagatcagctt-gatccag 266  Q
    ||||||||||| || |||||||||   |||||||||||||| |||||||||| ||| ||  ||||||||  ||||| || ||| |||||||| |||||||    
T  28389103 gacgttggtttatttgtcgtctttacgcggcgttgtttgtcatttttgtttctttcaagtcatttgttcagttcagattgtcatatcagcttagatccag 28389004  T
Q  267 tgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    || ||||| ||  ||||||||||| |||||||| |||| ||||||  ||| || |||  | |||||||||||||||| |||||    
T  28389003 tgaagatcaaatcaatgactttggtgtcgtccatgttgcagatccagagatatgggtattccggagacttgaatataatcata 28388921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 348
Target Start/End: Original strand, 32387588 - 32387765
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgta 270  Q
    |||| ||||||  |||||||||| |||||||||||| |||| ||||||  ||||| |||||||||||||||  || ||||| |||||| |||| |||| |    
T  32387588 gttgatttgtttatcgtctttgtgcggcgttgtttgcctttcttgttttattcaggtatttgttcgattcaa-ttgtcagaccagcttcgatctagtgca 32387686  T
Q  271 gatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||  ||||| |||| | |||| ||||||| ||||||| |||||| |||  | | || |||||||||||||||||    
T  32387687 gatccaatcaatgattttgacatcgttcacgttgcagatccggagacataggtgttccagatacttgaatatagtcata 32387765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 20146220 - 20146167
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  20146220 gtcttagtgcgacgttgttttgtttgtcgtctttgtacggcgttgtttgtcttt 20146167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 348
Target Start/End: Original strand, 28500825 - 28500990
Alignment:
Q  186 tcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatg 282  Q
    ||||||| || |||| |||||||||||| || |||||||| | |||||||||| ||||| || ||| |||| ||| ||||||||   |||||||  ||||    
T  28500825 tcgtcttagtgcggcattgtttgtctttcttatttcgttcgggtatttgttcggttcagattgtcatatcaacttcgatccagtacggatccaatcaatg 28500924  T
Q  283 actttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||| |||| ||||||||| ||||||| |||||| |||  |  |||||| ||||||||||||||    
T  28500925 actttgtcgtcctccacgttgcagatccggagacatgggtattctggagacatgaatatagtcata 28500990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 311
Target Start/End: Complemental strand, 10924155 - 10923984
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattc 241  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||  | || |||||||  ||||||||||| ||| |||    
T  10924155 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgttgtttttcttgtttctctcagatatttgatcggttc 10924056  T
Q  242 aggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    |  || || ||||| |||  || ||||| ||||||||  || |||||||||||  ||||||||| |||||||    
T  10924055 aaattgtcggatcaacttcaatgcagtgcagatccaatcaacgactttggcgttatccacgttgcagatccg 10923984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 299
Target Start/End: Complemental strand, 32390648 - 32390509
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-g 260  Q
    |||||| |||||||||| ||| || |||||||| ||||||||||||||||| ||||||| ||| | |||||||||| ||||  || |||||| |||||      
T  32390648 ttagtgcgacgttggttcgtttgttgtctttgtgcggcgttgtttgtctttcttgtttcattcgggtatttgttcggttcaaattatcagattagcttca 32390549  T
Q  261 atccagtgtagatccaa-aaatgactttggcgtcgtccac 299  Q
    ||| |||||||||| ||  ||||| |||| ||||||||||    
T  32390548 atctagtgtagatctaattaatgattttgtcgtcgtccac 32390509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 348
Target Start/End: Complemental strand, 40565172 - 40564970
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggtt 246  Q
    ||||||||||   ||||||||| |||  || |||||| ||||||||||| || |||||||||||||||   |  |||||| | |||||| ||||||  ||    
T  40565172 ttgtgatttcgtcgtcttagtgcgaccatgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcccta-gttcaggtgtttgtttgattcatatt 40565074  T
Q  247 ttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagt 344  Q
     ||||||||| || ||||||||| | ||||||  ||||||||||||||| || |||||| ||||||| |||||| | |  | |||||| || ||||||||    
T  40565073 gtcagatcagtttcgatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgcagatccggagacatggctattccggagattttaatatagt 40564974  T
Q  345 cata 348  Q
    ||||    
T  40564973 cata 40564970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 23428490 - 23428559
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||||||||||| ||||||  ||  ||||||||| | ||||||||||||    
T  23428490 aatgactttggcgtcgtcaacgttgtagatccggagacatgagtatttcggagacataaatatagtcata 23428559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 6074722 - 6074586
Alignment:
Q  178 tttgttcgtcgtctttgtacggcgttgtttgtctttttgtt-tcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatcc 275  Q
    |||||| ||||||||||| || | |||||||||||||   | | |||||  | |||||||| ||||| || |||||||| ||| ||||||||||||||||    
T  6074722 tttgtttgtcgtctttgtgcgaccttgtttgtcttttccctcttgttcaagtgtttgttcggttcagattgtcagatcaacttcgatccagtgtagatcc 6074623  T
Q  276 aaa-aatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||  ||||||||||||||| || |||||| |||||||    
T  6074622 aatcaatgactttggcgtcatcaacgttgcagatccg 6074586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 171 - 348
Target Start/End: Original strand, 8957327 - 8957507
Alignment:
Q  171 acgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtg 268  Q
    |||||| |||||| || |||||||| || ||||||||||||||| | | | |||||| | |||||||  ||||| || |||||||||||| |||||| ||    
T  8957327 acgttgttttgtttgttgtctttgtgcgacgttgtttgtcttttctctcttgttcaggtgtttgttcagttcagattgtcagatcagcttcgatccaatg 8957426  T
Q  269 tagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
     |||| |||  ||||||||| ||||| || |||||| ||||||| ||| || | |  |||||||| || ||||||||||||    
T  8957427 cagattcaaccaatgacttttgcgtcatcaacgttgcagatccggagatatggctatttcggagattttaatatagtcata 8957507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 24288917 - 24288877
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  24288917 gttgatttgttcgtcgtctttgtacggcgttgtttgtcttt 24288877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 24373305 - 24373345
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  24373305 gttgatttgttcgtcgtctttgtacggcgttgtttgtcttt 24373345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 318
Target Start/End: Complemental strand, 12524650 - 12524507
Alignment:
Q  178 tttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatcc 275  Q
    |||||| ||||| |||||||| |||||||||| ||| ||| || |||||| | ||  | | ||| || || |||||||| ||| ||||||||||||||||    
T  12524650 tttgttagtcgtttttgtacgacgttgtttgtttttcttgctttgttcaggtgttaatccaatttagattgtcagatcaactttgatccagtgtagatcc 12524551  T
Q  276 aaa-aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||  ||||||||||| ||| || ||||||||||||| |||||||    
T  12524550 aatcaatgactttggtgtcatcaacgttgtagatccaaagacat 12524507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 41063418 - 41063239
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| || ||||||||||||||| |||| |||||  || |||||||||| ||| || ||||  || | |||||| ||| ||    
T  41063418 ttattttgtgatttcgtcgtcttcgtatgacgttggtttgtttgtcggctttgagcgacgttgtttgtttttcttatttctctcggctatttgatcggtt 41063319  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| || | | |||||||| ||||||||| ||||||||  |||||||||| | || ||||||||| ||||||| ||||||    
T  41063318 cagattcttatatcagcttcgatccagtgcagatccaattaatgactttgacatcatccacgttgcagatccgcagacat 41063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 41358149 - 41358244
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatc 254  Q
    ||||||||| ||| ||| |||||||||||| ||||| ||||||||||||||||| ||||||   | || |||||||||| ||||| || |||||||    
T  41358149 gtcttagtgcgacattgttttgttcgtcgtgtttgtgcggcgttgtttgtctttcttgttttaattaggtatttgttcggttcagattgtcagatc 41358244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 316
Target Start/End: Original strand, 13079255 - 13079413
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||||||||  |||||| ||| |||||||||||||| || | |||||||||||| |  ||||||||| ||||||||||  |||  || ||| ||||||||    
T  13079255 gtcttagtgcaacgttgttttattcgtcgtctttgtgcgacattgtttgtctttcttgttcgttcaggtatttgttcggatcaaattatcatatcagctt 13079354  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagac 316  Q
      |||||| | | ||||||  | ||||||| ||||| || |||||||||||||| ||||    
T  13079355 aaatccagggcatatccaatcattgacttttgcgtcatcaacgttgtagatccggagac 13079413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 7771704 - 7771635
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| ||||||  ||  | ||||||| ||||||||||||||    
T  7771704 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagacatgaatatagtcata 7771635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 25962151 - 25962220
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||| |||||||| |||||||||||||| |||||| | |  | |||| |||||||||||||||||    
T  25962151 aatgacttttgcgtcgtcaacgttgtagatccggagacatggatattccggaaacttgaatatagtcata 25962220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 37425134 - 37425211
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc-tttttgtttcgttcagatatttgttc 236  Q
    ||||| ||| ||||||| |||||| ||||||||||| || ||||||||||| || ||||||||| ||| |||||||||    
T  37425134 gtctttgtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcattcttgtttcgtacaggtatttgttc 37425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 2555233 - 2555164
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||| |||| || |||||| ||||||| ||||||  ||  | ||||||||||||||||||||||    
T  2555233 aatgactttgacgtcatcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcata 2555164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 6635486 - 6635555
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| ||||||  ||  | |||||| ||||||||| |||||    
T  6635486 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagatttgaatataatcata 6635555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 13080263 - 13080455
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgta--cggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcagc 257  Q
    |||||||||  |||||| ||| ||||||||||||||   || |||||||||||||| |  ||||||||| ||||||||||  |||  || ||| ||||||    
T  13080263 gtcttagtgcaacgttgttttattcgtcgtctttgtgtgcgacgttgtttgtctttcttgttcgttcaggtatttgttcggatcaaattatcatatcagc 13080362  T
Q  258 tt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||  |||||| | | ||| ||  | ||||||| || || || |||||||||||||| || ||| |||  | ||||||||||||||| ||||||    
T  13080363 ttaaatccagggcatatcgaatcattgacttttgcatcatcaacgttgtagatccggagtcatgggtattccggagacttgaatattgtcata 13080455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 23881999 - 23881930
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| | |||||||||||| ||||||  ||  ||||| ||| || |||||||||||    
T  23881999 aatgactttggcgtcgtcaatgttgtagatccggagacatgagtatttcggtgacatgtatatagtcata 23881930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 7151043 - 7151111
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    ||||||||||||||| || |||||| ||||||  ||||||| ||  | || ||||||||||||||||||    
T  7151043 aatgactttggcgtcatcaacgttgcagatccagagacattagtattccgaagacttgaatatagtcat 7151111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 39531295 - 39531227
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    |||||||||||||||||| |||||| ||||||  ||||||  ||  | |||||||||||||||| ||||    
T  39531295 aatgactttggcgtcgtcaacgttgcagatccagagacatgagtattccggagacttgaatataatcat 39531227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 173 - 348
Target Start/End: Complemental strand, 32237987 - 32237809
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgta 270  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| |||||||||| ||||| || |||||||||||| ||||||||| |    
T  32237987 gttggtttgttcgtcgtctttgtgcggcgttgtttgtctttctagtttcgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtgca 32237888  T
Q  271 gatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
     || |||  ||||||||||  || |||||||||| |||||||||||||| | |  |||||||| |||||| ||||||||    
T  32237887 cattcaatcaatgactttgatgttgtccacgttgcagatccgaagacatggatatttcggagatttgaatttagtcata 32237809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 913331 - 913129
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttt 247  Q
    |||||||| ||||||||||| | | ||| |||||||||||||||||| || |||||||||||||| |||||| |||  | |||||||||| ||||| ||     
T  913331 gtgatttcgctgtcttagtgcggcattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagattg 913232  T
Q  248 tcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtc 345  Q
    |||||||||||| ||||||||| ||||| ||  ||||||||||| ||| || |||||| ||||||| |||||  |||  ||||||||||| |||||||||    
T  913231 tcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaaaggtatttcggagacttaaatatagtc 913132  T
Q  346 ata 348  Q
    |||    
T  913131 ata 913129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 348
Target Start/End: Original strand, 40797133 - 40797334
Alignment:
Q  150 tgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggtttt 248  Q
    ||||||| | ||||||||| ||| ||| |||||||||||||||||| || |||||||||||||| |||||| |||| | |||||||||||||||| || |    
T  40797133 tgatttcgccgtcttagtgagacattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcgattcagattgt 40797232  T
Q  249 cagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtca 346  Q
    ||||||||||| |||| |||| ||||| ||  ||||||||||| ||| || || ||||||||||| |||||  |||  | ||||||||| ||||||||||    
T  40797233 cagatcagcttcgatctagtgcagatcaaatcaatgactttggagtcatcaacattgtagatccggagacaagggtattccggagacttaaatatagtca 40797332  T
Q  347 ta 348  Q
    ||    
T  40797333 ta 40797334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 160 - 344
Target Start/End: Original strand, 4019705 - 4019895
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttg---tttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatca 255  Q
    ||||||||| |||||||  ||||||||||||||||| ||||||||   ||||||||| |||||| |||||| |||||||||| ||||| || ||||||||    
T  4019705 gtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttttttgtctttattgttttgttcaggtatttgttcggttcagattgtcagatca 4019804  T
Q  256 gctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagt 344  Q
    |||| ||||||||| ||||||||  |||||||||||||||||| |||||| ||||||| || |||  ||  |  |||||||||||||||||    
T  4019805 gcttagatccagtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccggaggcatgagtattctggagacttgaatatagt 4019895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 348
Target Start/End: Original strand, 22844151 - 22844353
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttt 247  Q
    |||||||||  ||||||||| ||| ||| |||||||||||||||||| || |||||||||||||| |||||| |||||| |||||||||| ||||| ||     
T  22844151 gtgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattg 22844250  T
Q  248 tcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtc 345  Q
    |||||||| ||| |||| |||| ||||| ||  ||||||||||| || ||| || ||| |||||||||||||| |||  | ||||||| | |||||||||    
T  22844251 tcagatcaacttcgatcaagtgcagatcaaatcaatgactttggagttgtcaacattgcagatccgaagacatgggtattccggagacctaaatatagtc 22844350  T
Q  346 ata 348  Q
    |||    
T  22844351 ata 22844353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 348
Target Start/End: Complemental strand, 29776693 - 29776503
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||  | || ||||||||||||    
T  29776693 tctttgtgcgacgtttgtttgttcgtcgtctttgtacggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttttgattgtcagatcagctt 29776594  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
     ||| ||||| | ||||||  ||| ||||||| || ||||||||   | ||||| |||||  |||  ||| ||||||||||||||||||||    
T  29776593 agattcagtgcaaatccaatcaataactttggtgttgtccacgtcacaaatccggagacaagggtatttcagagacttgaatatagtcata 29776503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 43029775 - 43029984
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||    
T  43029775 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagtt 43029874  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| ||||||||| ||||||||  ||||||||||| ||| ||||||||| ||||||| | ||| ||||| || |||||| || |    
T  43029875 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggagtcatccacgttgcagatccggataca-tggttattccggagatttaa 43029973  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  43029974 atatagtcata 43029984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 149 - 302
Target Start/End: Complemental strand, 25939494 - 25939338
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttt 247  Q
    ||||||||  ||||| |||| ||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||   ||||| ||     
T  25939494 gtgatttcgttgtctcagtgcgacgttgttttgttagtcgtctttgtgcggcgttgtttgtctttgttgtttcgttcagatatttgttatgttcagattg 25939395  T
Q  248 tcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgtt 302  Q
    | |||||||||| ||| ||||| ||||||||  |||||||||||||| ||| |||||    
T  25939394 ttagatcagcttagattcagtgcagatccaatcaatgactttggcgtagtcaacgtt 25939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 348
Target Start/End: Complemental strand, 22893718 - 22893527
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcag-ct 258  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||  | ||||  || ||| || ||  |    
T  22893718 tcttagtgcgacgttggtttgttcgtcatctttgtacggcgttgtttgtctttcttgtttcgttcagatatttgtatggttcatattgtcatatgagttt 22893619  T
Q  259 tgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcg-gagacttgaatatagtcata 348  Q
    |||||||||| ||||| ||  |||||||||||||| || ||||||| |  |||||| |||| |||  | || ||||||| ||||||||||||    
T  22893618 tgatccagtgcagatctaatcaatgactttggcgttgttcacgttgcaagtccgaatacatgggtattccgagagacttaaatatagtcata 22893527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 1165418 - 1165209
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| |  |||||||||| ||| |||||||  |||| |||||| ||  ||    
T  1165418 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcagtt 1165319  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttc-ggagacttga 337  Q
    ||| || | |||||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| | ||| ||||| ||| ||||| || |    
T  1165318 cagattgttagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggataca-tggttattctggagatttaa 1165220  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  1165219 atatagtcata 1165209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 348
Target Start/End: Original strand, 39340298 - 39340500
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttt 247  Q
    ||||||| || ||||||||| ||| ||| |||| ||||||||||||| ||||||||||||||||| |||||||||| |  |||||||||| || || ||     
T  39340298 gtgattttaccgtcttagtgcgactttgttttgctcgtcgtctttgtgcggcgttgtttgtctttcttgtttcgttaatgtatttgttcggtttagattg 39340397  T
Q  248 tcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtc 345  Q
    ||| |||| ||| |||| ||||  ||| |||  |||||||||| ||||||| |||||| ||||||| ||||||  ||  | |||||||||||||||||||    
T  39340398 tcatatcaacttagatctagtgctgattcaatcaatgactttgtcgtcgtcaacgttgcagatccggagacatgtgtattccggagacttgaatatagtc 39340497  T
Q  346 ata 348  Q
    |||    
T  39340498 ata 39340500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 45664313 - 45664485
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||  |||||| |||  ||||| |||| |||||| | ||||| || |||||||||||||| |||||||  |||| |||||| ||| ||    
T  45664313 ttattttgtgatttcgttgtcttcgtgctacgttcgttttttcgtcatatttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 45664412  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||| || |||||||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| |||||||    
T  45664413 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 45664485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 3088685 - 3088477
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||  ||| ||    
T  3088685 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgctt 3088587  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||| ||| ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| | ||| ||||| || |||||| || |    
T  3088586 cagattgtcagatcatcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaaca-tggttattccggagatttaa 3088488  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  3088487 atatagtcata 3088477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 21586010 - 21586196
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttttt-gtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||||||||||||||| ||| |||||||||||| |  | | |||||||||||||| |||| |||||| || ||||||| ||||| || ||||| ||||||    
T  21586010 tcttagtgtgacgttgatttattcgtcgtctttttttgactttgtttgtcttttttgttttgttcaggtacttgttcggttcagattgtcagaccagctt 21586109  T
Q  260 -gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagt 344  Q
     ||| ||||| | ||||||  |||||||||| |||||||||||||| ||||||| ||||||  ||  | |||||| |||||||||||    
T  21586110 cgattcagtgcaaatccaatcaatgactttgacgtcgtccacgttggagatccggagacatgtgtattccggagagttgaatatagt 21586196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 28995312 - 28995122
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  | || |||||| ||| ||||| || ||| |||||||    
T  28995312 gtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcgcttcagattgtcatatcagct 28995214  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    | ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| | ||| ||||| || |||||| || ||||||||||||    
T  28995213 tcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaaca-tggttattccggagatttaaatatagtcata 28995122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 348
Target Start/End: Original strand, 53426895 - 53427099
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||||||   ||||||||| |||||||  | | |||||||||||| |||||| |||||| |||||||||| || || |    
T  53426895 ttgtgatttcgtcgtcttagtgcgacgttttgttgttcgtcatctttgtgtgcctttgtttgtctttcttgttttgttcaggtatttgttcggtttagat 53426994  T
Q  246 tttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | |||||| ||||| |||  |||| ||||||||  |||||||||||||||||| |||||| |||||||||||| |  ||  | || ||||||||||||||    
T  53426995 tgtcagataagcttagatatagtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccgaagacttgagtattccgaagacttgaatatag 53427094  T
Q  344 tcata 348  Q
    |||||    
T  53427095 tcata 53427099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 142 - 346
Target Start/End: Complemental strand, 32089952 - 32089746
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||||||| ||| ||  ||||| ||||||||||||  ||| |||||||||||| ||||||||||||  |||||||| | ||    
T  32089952 ttattttgtgatttcgtcgtcttagtgcgacattactttgtccgtcgtctttgtggggcattgtttgtctttcttgtttcgttcatgtatttgtttggtt 32089853  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
     || || ||| |||||||| ||||||||| ||||||||  ||||| |||| ||||||| |||||| | ||||| |||||| |||  | ||||||||||||    
T  32089852 tagattgtcatatcagcttcgatccagtgcagatccaatcaatgattttgacgtcgtcaacgttgaatatccg-agacataggtattccggagacttgaa 32089754  T
Q  339 tatagtca 346  Q
    ||||||||    
T  32089753 tatagtca 32089746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 41882431 - 41882223
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  41882431 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgctt 41882333  T
Q  241 caggttttcagatcagcttga-tccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||| || |||||||||||| | ||||||| ||||  ||  ||||||||||||||| ||||||||| |||||| || | || | |  |||||||| || ||    
T  41882332 cagattgtcagatcagcttcaatccagtgcagatttaatcaatgactttggcgtcatccacgttgcagatccaaaaaaatagttatttcggagatttaaa 41882233  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  41882232 tatagtcata 41882223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 29182630 - 29182453
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| |||||||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||  |||||| ||| ||    
T  29182630 ttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcggtt 29182531  T
Q  241 caggttttcagatcagc-ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| || ||  |||||| ||||||||||| ||||||||  |||| |||| ||||| |||||| |||||||| | ||||||    
T  29182530 cagattgtc--atcagctttgatccagtgcagatccaatcaatggctttagcgtcatccacgctgtagatctggagacat 29182453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 339
Target Start/End: Original strand, 27831240 - 27831391
Alignment:
Q  191 tttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaaa-atgacttt 287  Q
    ||||| ||| || |||||||||| |||||| ||||| ||||||||| ||||||| || |||||||||||| |||| |||| ||||| ||   ||||||||    
T  27831240 tttgttcggagtagtttgtctttcttgttttgttcatatatttgtttgattcagattgtcagatcagctttgatctagtgcagatctaatccatgacttt 27831339  T
Q  288 ggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaat 339  Q
    ||||||||||||| |||||||||| |||||  |||  | |||||||||||||    
T  27831340 ggcgtcgtccacgctgtagatccggagacacgggtattccggagacttgaat 27831391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 40365337 - 40365435
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||||| |||| | |||||| || |||||||||  || || || ||||||||||||    
T  40365337 tcttaatgcgacgttggtttgtttgtcgtctttgtacggcgttgtttgttttttagattcgtttaggtatttgttcagtttagattgtcagatcagctt 40365435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 50519904 - 50520045
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||||| || |||||||||||| ||||||||    
T  50519904 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagt 50520002  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatc 309  Q
    | |||| |||  ||||| ||||||||| ||||||||| |||||    
T  50520003 gcagattcaatcaatgattttggcgtcatccacgttgcagatc 50520045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 1220251 - 1220151
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| || |||| |||||||||||||||||| |||| |||||||||| ||||||||||||  | |||||||||  |||||||| ||| |||||||    
T  1220251 gtcttagtgcgatgttgttttgttcgtcgtctttgtgcggctttgtttgtcttttttgtttcgtttgggtatttgttcatttcaggttgtcatatcagct 1220152  T
Q  259 t 259  Q
    |    
T  1220151 t 1220151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 311
Target Start/End: Complemental strand, 33977946 - 33977775
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  ||||| ||| |||||||||| ||||||||||||||| || |||||||||| | | |||||||  |||| |||||| ||| ||    
T  33977946 ttattttgtgatttcatcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttgtcttgtttctctcaggtatttgatcgctt 33977848  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||| || | ||||||| || ||| ||||| ||||||||  ||||||||||| ||| ||||||||| |||||||    
T  33977847 cagtttgttagatcagtttcgattcagtgcagatccaatcaatgactttggtgtcatccacgttgcagatccg 33977775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 40461999 - 40461808
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc- 257  Q
    ||||||||| || |||| |||||||||||||||||| ||||||||||||||||| ||||||| | || ||||||| | | ||||| || |||||| |||     
T  40461999 gtcttagtgcgatgttgatttgttcgtcgtctttgtgcggcgttgtttgtctttcttgtttcatacatatatttgattggttcagattgtcagattagct 40461900  T
Q  258 ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||   |||||||||||  ||||| ||| ||||  ||||| ||| ||||| | |||||| |||    | ||||||||||||||||||||    
T  40461899 ttgatcatatgtagatccaatcaatgaatttagcgttttccaccttgcagatctggagacatgggtatcacagagacttgaatatagtcata 40461808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 318
Target Start/End: Original strand, 54240178 - 54240357
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||| ||||||||| ||  ||||||||| ||| |||||||  |||| |||||| ||| ||    
T  54240178 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgacgtctttgtgcgatgttgtttgtttttcttgtttctatcaggtatttgatcggtt 54240277  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| || | |||||||||| ||| ||||| | ||||||  ||||||||||||| | |||| |||| ||||||| ||||||    
T  54240278 cagattgtgagatcagcttcgattcagtgcaaatccaatcaatgactttggcgacatccatgttgcagatccggagacat 54240357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 309
Target Start/End: Complemental strand, 22286744 - 22286603
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  ||||  ||||| ||| ||||  || |||||||||||| ||||||||    
T  22286744 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggcatttgatcgcttcatattgtcagatcagcttcgatccagt 22286646  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatc 309  Q
    | ||||||||  |||||||||| |||| ||||||||| |||||    
T  22286645 gcagatccaatcaatgactttgacgtcatccacgttgcagatc 22286603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 4206445 - 4206376
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||||||||| | ||||||  ||  ||||||||| ||||||||||||||    
T  4206445 aatgactttggcgtcgtcaacgttgtagatcgggagacataagtatttcggagacatgaatatagtcata 4206376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 11819321 - 11819390
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||||||||||  |   | ||||||||||||||||||||||    
T  11819321 aatgactttggcgtcgtcaacgttgcagatccgaagacatgaggattccggagacttgaatatagtcata 11819390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 40883757 - 40883688
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||||||||||  ||  |||||| || ||||||||||||||    
T  40883757 aatgactttggcgtcgtcgacgttgcagatccgaagacatgagtatttcggatacatgaatatagtcata 40883688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 348
Target Start/End: Original strand, 33076451 - 33076586
Alignment:
Q  215 tgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccga 312  Q
    |||||| ||||| |||||| ||| ||||| || | |||| ||||| ||||||||| ||||||||  |||||||||| |||| ||||||||| |||||||     
T  33076451 tgtttctttcaggtatttgatcggttcagattgttagattagctttgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccgg 33076550  T
Q  313 agacattggttcttc-ggagacttgaatatagtcata 348  Q
    || ||| |||| ||| ||||| |||||||||||||||    
T  33076551 aggcat-ggttattccggagatttgaatatagtcata 33076586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 348
Target Start/End: Original strand, 33637639 - 33637710
Alignment:
Q  277 aaaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||||| |||||| ||||||| ||||||  |   | ||||||||||||||||||||||    
T  33637639 aaaatgactttggcgtcgtcaacgttgcagatccgtagacatgaggattccggagacttgaatatagtcata 33637710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 48652333 - 48652262
Alignment:
Q  277 aaaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||||| |||||| ||||||| ||||||  |   | ||||||||||||||||||||||    
T  48652333 aaaatgactttggcgtcgtcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcata 48652262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 4081946 - 4082015
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||||| ||| || || || ||||||||||||||||||||||    
T  4081946 aatgactttggcgtcgtcaacgttgcagatccgaataca-tgattattccggagacttgaatatagtcata 4082015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 348
Target Start/End: Complemental strand, 20201048 - 20200871
Alignment:
Q  174 ttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtag 271  Q
    |||||||||| ||| |||||||  |  ||||||||| ||| |||||||  |||| |||||| ||| ||||| || ||||||||||||  ||| |||| ||    
T  20201048 ttggtttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgtcagatcagcttcaatcaagtgcag 20200949  T
Q  272 atccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||  |||||||| |||||| ||||||||| | ||||| ||||||   |  |||||||| || ||||||||||||    
T  20200948 atccaatcaatgacttcggcgtcttccacgttgcaaatccggagacatgattatttcggagatttaaatatagtcata 20200871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 22485203 - 22485272
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||| || |||||| ||||||||||||||  ||  | ||||||| ||||||||||||||    
T  22485203 aatgactttggcgtcctcaacgttgcagatccgaagacataagtattccggagacatgaatatagtcata 22485272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 32080645 - 32080576
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||| || |||||| ||||||| ||||||  |   ||||||||||||||||||||||||    
T  32080645 aatgactttggcgtcatcaacgttgcagatccggagacatgaggatttcggagacttgaatatagtcata 32080576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 36691690 - 36691621
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||| | ||||||  ||  | ||||||||||||||||||||||    
T  36691690 aatgactttggcgtcgtcaacgttgcagatctggagacatgagtattccggagacttgaatatagtcata 36691621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 42106250 - 42106364
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| ||||||| |||||||||| ||||||  || |||| ||||||||| |||||| |||  | |||||||||| ||||| || |||||||||||    
T  42106250 gtctttgtgcgacgttgttttgttcgtcatctttg--cgacgttatttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagatcagct 42106347  T
Q  259 t-gatccagtgtagatc 274  Q
    | ||||||||| |||||    
T  42106348 tcgatccagtgcagatc 42106364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 1074785 - 1074717
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    |||||||||||||||||| |||||| ||||||| ||||||  ||  | |||||||||||||||| ||||    
T  1074785 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagacttgaatataatcat 1074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 7656519 - 7656419
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| |||||||||||||||||||||||||| ||   |||||||||||| |||||||  |||| |||||| ||| || || || | |||||||||    
T  7656519 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgatattgtttgtctttcttgtttctctcaggtatttgatcggtttagattgttagatcagct 7656420  T
Q  259 t 259  Q
    |    
T  7656419 t 7656419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 311
Target Start/End: Original strand, 37051728 - 37051858
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-a 279  Q
    ||||||||||| || || |||||||||||||||   |  |||||| | |||| ||||||||| || ||||||||| || ||||||||| ||||||||  |    
T  37051728 ttcgtcgtcttagtgcgacgttgtttgtcttttccatg-gttcaggtgtttgctcgattcagattgtcagatcagtttcgatccagtgcagatccaacca 37051826  T
Q  280 atgactttggcgtcgtccacgttgtagatccg 311  Q
    || ||||||||||| || |||||| |||||||    
T  37051827 ataactttggcgtcatcaacgttgcagatccg 37051858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 348
Target Start/End: Original strand, 50460341 - 50460491
Alignment:
Q  201 gttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtcc 297  Q
    ||||||||||||| || |||||||||| |||||||||| || || || ||||||||| || |||||| || | ||||||  ||| |||||| ||| |||     
T  50460341 gttgtttgtctttcttatttcgttcagttatttgttcggtttagattgtcagatcagtttcgatccaatgcaaatccaatcaataactttgacgttgtca 50460440  T
Q  298 acgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||| | ||||||||||||  ||  | |  |||||||||||||||||||    
T  50460441 acgttgcaaatccgaagacatgagtattccaaagacttgaatatagtcata 50460491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 10977475 - 10977544
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||| ||||||||| ||||||| | |||| | |  |||||||| || ||||||||||||    
T  10977475 aatgactttggcgtcatccacgttgcagatccggatacatggttatttcggagatttaaatatagtcata 10977544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 19645429 - 19645498
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |  ||| ||||||||||||||  ||  | ||||||| ||||||||||||||    
T  19645429 aatgactttggcgtcgtcaatattgcagatccgaagacatgagtattccggagacatgaatatagtcata 19645498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 348
Target Start/End: Complemental strand, 20203230 - 20203053
Alignment:
Q  174 ttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtag 271  Q
    |||||||||| ||| |||||||  |  ||||||||| ||| |||||||  |||| |||||| ||| ||||| || ||||||||||||  ||| |||| ||    
T  20203230 ttggtttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgtcagatcagcttcaatcaagtgcag 20203131  T
Q  272 atccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||  |||||||| |||||| ||||||||| | || || ||||||   |  |||||||| || ||||||||||||    
T  20203130 atccaatcaatgacttcggcgtcttccacgttgcaaattcggagacatgattatttcggagatttaaatatagtcata 20203053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 30156172 - 30156103
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||| |||||||||||| | |||| |||||||  ||||| |||  ||||||||| ||||||||||||||    
T  30156172 aatgattttggcgtcgtcaaggttgcagatccggggacatgggtatttcggagacatgaatatagtcata 30156103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 39610448 - 39610517
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||| |||||| | ||||||||| ||  |||||  || |||||||||||| ||||||||||||    
T  39610448 aatgactttggtgtcgtcaatgttgtagattcggtgacatgagtacttcggagacttaaatatagtcata 39610517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 49627986 - 49627917
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| ||||||  ||  | | ||||| ||||||||||||||    
T  49627986 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccagagacatgaatatagtcata 49627917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 55455109 - 55455178
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||  |||||| ||||||| ||||||  ||  | ||||||| ||||||||||||||    
T  55455109 aatgactttggcgtcgttaacgttgcagatccggagacatgagtattccggagacatgaatatagtcata 55455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 318
Target Start/End: Original strand, 11846684 - 11846819
Alignment:
Q  185 gtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc-ttgatccagtgtagatccaa-aaat 281  Q
    ||||||||||| || |||| ||| ||||| |||||||  |||| |||||| ||| ||||| || |||||||||| |||||||  || | ||||||  |||    
T  11846684 gtcgtctttgtgcgacgtt-tttttctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctttgatccgatgcatatccaatcaat 11846782  T
Q  282 gactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    || ||||||||| ||||||||| ||||||| ||||||    
T  11846783 gattttggcgtcatccacgttgcagatccggagacat 11846819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 318
Target Start/End: Original strand, 32804387 - 32804566
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  ||||||||| || |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||  |||||||| ||||    
T  32804387 ttattttgtgatttcatcgtcttagtgagatgttggtttgttcctcgtctttgtatggcgttgtttgtctttcttgtttcgttcatgtatttgtttgatt 32804486  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| || | |||||| ||| |||| |||| ||||||||  ||||||||||| |||||||| ||||||||| || ||||||    
T  32804487 cagattgtgagatcaacttcgatcaagtgcagatccaatcaatgactttggtgtcgtccatgttgtagattcggagacat 32804566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 23843446 - 23843237
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||||| |||||||  | || |||||| ||| ||    
T  23843446 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctcttaggtatttgatcggtt 23843347  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||| || |||||||||||| ||||||||| |||| |||  ||||||||||||||| ||||||||| ||||||| |||||| | |  | |||||| || ||    
T  23843346 cagattgtcagatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaa 23843247  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  23843246 tatagtcata 23843237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 12576484 - 12576294
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| |||||||||||||| ||||||||||||||| || |||||||||| ||  |||||||  |||| |||||| ||| ||||| || |||||||||||    
T  12576484 gtctttgtgtgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcgcttcagattgtcagatcagct 12576386  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    | ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| | ||| ||||| || |||||| || ||||||||||||    
T  12576385 tcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaaca-tggttattccggagatttaaatatagtcata 12576294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 13234130 - 13233921
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  13234130 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggtt 13234031  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||  || ||||||||| || |||| |||| ||||||||  ||||| ||||||||| ||||||||| ||||||| ||||| ||||| || |||||| || |    
T  13234030 caaattgtcagatcagtttcgatctagtgcagatccaatcaatgattttggcgtcatccacgttgcagatccggagaca-tggttattccggagatttaa 13233932  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  13233931 atatagtcata 13233921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 348
Target Start/End: Original strand, 19759908 - 19760089
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    ||||||||||||||| |||||||||| || |||||||||| ||| |||||||  |||  |||||| ||| ||||| || ||||||||| || ||||||||    
T  19759908 gacgttggtttgttcatcgtctttgtgcgacgttgtttgtatttcttgtttctctcatgtatttgatcggttcagattgtcagatcagtttcgatccagt 19760007  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | ||||||||  ||||||||||||||| ||||||||| ||||||| |||||| | |  | |||||| || ||||||||||||    
T  19760008 gcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcata 19760089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 346
Target Start/End: Original strand, 11426070 - 11426240
Alignment:
Q  179 ttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatcca 276  Q
    ||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||||| || |||||||||||| ||||||||| |||| ||    
T  11426070 ttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatctcttcagattgtcagatcagcttcgatccagtgcagattca 11426169  T
Q  277 aa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtca 346  Q
    |  ||||||||||||||| ||||||||||||||||||| ||| ||||| || |||||| || ||||||||||    
T  11426170 atcaatgactttggcgtcatccacgttgtagatccgaaaaca-tggttattccggagatttaaatatagtca 11426240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 348
Target Start/End: Original strand, 10744680 - 10744883
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || ||||||||| |||| ||| |||||| || |||||||||| ||||| |    
T  10744680 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttggttcgtttaggtatttgttcggttcagat 10744779  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | |||||||||||| ||||| ||| | ||| ||  ||||||||||| |||||| |||||| | ||||| |||||  |||  | ||||||||| |||||||    
T  10744780 tgtcagatcagcttcgatccggtgca-atcaaattaatgactttggagtcgtcaacgttgcaaatccggagacaagggtattccggagacttaaatatag 10744878  T
Q  344 tcata 348  Q
    |||||    
T  10744879 tcata 10744883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 348
Target Start/End: Original strand, 20496332 - 20496494
Alignment:
Q  189 tctttgtacggcgttgtttgtcttttt-gtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-aaatgact 285  Q
    |||||||||| | |||||||||||||| |||| |||||| |||||||||| ||||| || |||||||||||| ||||||||| | ||||||  |||||||    
T  20496332 tctttgtacgactttgtttgtcttttttgttttgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtgcaaatccaatcaatgact 20496431  T
Q  286 ttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||| |||||| |||||| | |||   ||| || |||  | ||||||||||||||||||||||    
T  20496432 ttggtgtcgtcaacgttgcatatcttgagagatgggtattccggagacttgaatatagtcata 20496494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 303
Target Start/End: Original strand, 20845119 - 20845264
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||| ||| ||| |||||||||||||||||||||| || || ||||||| ||| |||||||  ||||||||||| ||| ||||| || |||||||| |||    
T  20845119 tcttcgtgcgacattggtttgttcgtcgtctttgtgcgacgctgtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcaactt 20845218  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttg 303  Q
     ||||||||| ||||||||  |||||||| |||||| |||||||||    
T  20845219 cgatccagtgcagatccaatcaatgacttcggcgtcatccacgttg 20845264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 171 - 318
Target Start/End: Original strand, 1944217 - 1944367
Alignment:
Q  171 acgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtg 268  Q
    ||||||||||||  ||||||||||| ||||||||||||||||| |||| |||||||| || ||||| | ||||  || ||| |||||||| |||||| ||    
T  1944217 acgttggtttgtctgtcgtctttgtgcggcgttgtttgtctttcttgtgtcgttcaggtaattgtttggttcaaattgtcatatcagcttcgatccaatg 1944316  T
Q  269 tagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
      |||||||  ||| | ||||||||||||||||||| | ||||||||||||    
T  1944317 cggatccaatcaataattttggcgtcgtccacgttgcatatccgaagacat 1944367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 316
Target Start/End: Original strand, 8644375 - 8644514
Alignment:
Q  180 tgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa 277  Q
    |||| ||||||||||| |||||||| |||||||| |||||| |||||| |||||||| | ||||| || || ||||| ||| |||||| || |||| |||    
T  8644375 tgttggtcgtctttgtgcggcgttgcttgtctttcttgttttgttcaggtatttgtttggttcagattgtctgatcaacttagatccattgcagattcaa 8644474  T
Q  278 a-aatgactttggcgtcgtccacgttgtagatccgaagac 316  Q
      |||||||||||||||||| ||||| |||||||| ||||    
T  8644475 tcaatgactttggcgtcgtcaacgttatagatccggagac 8644514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 5417215 - 5417139
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgt 222  Q
    ||||||||||   ||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  5417215 ttgtgatttcgtcgtctttgtgcgacgttggtttgttcgtcgtctttgtgcggcgttgtttctctttcttgtttcgt 5417139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 348
Target Start/End: Complemental strand, 12652188 - 12652014
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgta 270  Q
    |||| |||||||||||| ||| | ||  ||||||| ||||| ||||||||||||  |||||||||| ||  | || |||||||| ||| |||  |||| |    
T  12652188 gttgttttgttcgtcgtatttctgcgatgttgtttttctttcttgtttcgttcatgtatttgttcggttaggattgtcagatcaacttagatttagtgca 12652089  T
Q  271 gatccaaaaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||   | ||||||||||||||||||| |||||| |||||||| ||| | |||  | ||||||||||||||||||||||    
T  12652088 ga---ataaatgactttggcgtcgtcaacgttgcagatccgacgacttaggtattccggagacttgaatatagtcata 12652014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 6419741 - 6419672
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| | |||| ||||||| ||||||  ||  ||||||||||||||||||||||||    
T  6419741 aatgactttggcgtcgtcaaagttgcagatccggagacatgagtatttcggagacttgaatatagtcata 6419672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 15128170 - 15128114
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgtt 203  Q
    ||||||||||   ||||||||| |||||||||||||||||||||||||| |||||||    
T  15128170 ttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcggcgtt 15128114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 302
Target Start/End: Complemental strand, 33541533 - 33541390
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||||||||||||| || |||||| ||||||||||| ||  ||||||||||||||   || |||||| | |||||| ||||||| || | ||||||||||    
T  33541533 gtcttagtgtgacgctgttttgtttgtcgtctttgtgcgatgttgtttgtcttttccctt-gttcaggtgtttgttagattcagattgttagatcagctt 33541435  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgtt 302  Q
     | ||||||| ||||||||  ||||||||||| ||| || |||||    
T  33541434 cgttccagtgcagatccaaccaatgactttggtgtcatcaacgtt 33541390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 12481255 - 12481184
Alignment:
Q  277 aaaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||||| |||||| ||||||| ||||||  |   | ||||||||||||||||||||||    
T  12481255 aaaatgactttggcgtcgtcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcata 12481184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 348
Target Start/End: Original strand, 30813302 - 30813373
Alignment:
Q  277 aaaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||||| |||||| ||||||| ||||||  |   ||| ||||||||||||||||||||    
T  30813302 aaaatgactttggcgtcgtcaacgttgcagatccggagacatgaggatttcagagacttgaatatagtcata 30813373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 5417103 - 5417037
Alignment:
Q  282 gactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||| ||||||||||||| ||||||  | |||| |||  ||||||||||||||||||||||||    
T  5417103 gactttggtgtcgtccacgttgcagatccagatacatgggtatttcggagacttgaatatagtcata 5417037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 292
Target Start/End: Original strand, 34020715 - 34020848
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcag-ct 258  Q
    ||||||||| |||| || |||||| |||||||||||||| |||||||||| ||||  | | |||||| | |||||||   |||| || ||||||||| ||    
T  34020715 gtcttagtgcgacgctgttttgtttgtcgtctttgtacgacgttgtttgt-ttttcctcttgttcaggtgtttgttcagatcagattgtcagatcagcct 34020813  T
Q  259 tgatccagtgtagatccaa-aaatgactttggcgt 292  Q
     |||| |||||||||||||  ||||||||||||||    
T  34020814 cgatctagtgtagatccaaccaatgactttggcgt 34020848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 891680 - 891793
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  |||| |||||| | |||||||||| ||| ||||||| | | || |||||||||| || |||||||||| |||||||||| ||    
T  891680 ttattttgtgatttcatggtctgagtgtggctttggtttgtttgtcatctttgtgcagtgtggtttgtctttcttatttcgttcaggtatttgttcggtt 891779  T
Q  241 caggttttcagatc 254  Q
     || || |||||||    
T  891780 tagattgtcagatc 891793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 311
Target Start/End: Original strand, 7049356 - 7049509
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||| ||| |||||||||||  || ||||||||||  | |||||||||| ||| |||||||  |||| |||||| ||| ||||| || |||||||| |||    
T  7049356 tcttcgtgcgacgttggtttcgtcatcgtctttgtgagacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcaactt 7049455  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
     ||||||||| |||| |||  |||||||||| | || ||||||||| |||||||    
T  7049456 cgatccagtgcagatgcaatcaatgactttgacatcatccacgttgcagatccg 7049509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 13871509 - 13871440
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| ||||||  ||  | ||||||| ||||||||||||||    
T  13871509 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagacatgaatatagtcata 13871440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 23101291 - 23101222
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| ||||||  ||  | ||||||| ||||||||||||||    
T  23101291 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagacgtgaatatagtcata 23101222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 35219796 - 35219727
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||| ||||||| |||||| ||||||| | ||||  ||  ||||||||||||||||||||||||    
T  35219796 aatgactttgacgtcgtcaacgttgcagatccggaaacatgagtatttcggagacttgaatatagtcata 35219727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 1106750 - 1106682
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    |||||||||||||||||| |||||| ||||||| ||||||  ||  | |||||||||||||||| ||||    
T  1106750 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagacttgaatataatcat 1106682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 277
Target Start/End: Original strand, 32457738 - 32457874
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattc 241  Q
    |||| ||||||||||   ||||| ||| ||||||| |||||||||||||||||| || | |||||| | || |||||||  |||| |||||| ||| |||    
T  32457738 ttattttgtgatttcgtcgtcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacattgtttattttcttgtttctctcaggtatttgatcggttc 32457837  T
Q  242 aggttttcagatcagctt-gatccagtgtagatccaa 277  Q
    || || ||||| || ||| ||| ||||| ||||||||    
T  32457838 agattgtcagaccaacttcgattcagtgcagatccaa 32457874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 548888 - 548709
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  ||||| |||  | ||||||||||||||||||||  |  | |||||||| | ||| |||||||  |||| |||||| ||| ||    
T  548888 ttattttgtgatttcatcgtcttcgtgcaatgttggtttgttcgtcgtcttcatgtgacgttgtttctttttcttgtttctatcaggtatttgatcggtt 548789  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| || ||| |||||||| |||| |||| ||||||||  ||| ||||||||||| |||||| || ||||| | ||||||    
T  548788 cagattgtcatatcagcttcgatctagtgcagatccaatcaattactttggcgtcatccacgctgcagatctggagacat 548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 33194697 - 33194812
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   || ||||||||| |||||||||||||||||  |||  ||  ||||||||||||| || |||| ||| | |||||||||| ||    
T  33194697 ttattttgtgatttcgtcgtgttagtgtgatgttggtttgttcgtcgtacttgagcgttgttgtttgtctttcttatttccttcgggtatttgttcggtt 33194796  T
Q  241 caggttttcagatcag 256  Q
    ||| || |||||||||    
T  33194797 cagattgtcagatcag 33194812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 5544799 - 5544893
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgtt 235  Q
    |||| |||| ||||||  ||| ||||| || |||| ||||||||||||||||||  | |||||||||||||| || |||||||||| | ||||||    
T  5544799 ttattttgttatttcatcgtcctagtgcgatgttgatttgttcgtcgtctttgtgtgacgttgtttgtctttcttatttcgttcaggtgtttgtt 5544893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 4663837 - 4663748
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgtt 235  Q
    ||||||||||   ||||||||| ||||||  |||||||||| ||||||| || | |||||| | ||| ||||||||||||| ||||||||    
T  4663837 ttgtgatttcgtcgtcttagtgcgacgttattttgttcgtcatctttgtgcgactttgtttttttttattgtttcgttcaggtatttgtt 4663748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 12654192 - 12654123
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||| || |||||| |||| || ||||||  ||  | ||||||||||||||||||||||    
T  12654192 aatgactttggcgtcatcaacgttgcagattcggagacatgagtattccggagacttgaatatagtcata 12654123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 23638003 - 23637934
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||| ||||||| | |||| ||||||| ||||||  ||  | ||||||||||||||||||||||    
T  23638003 aatgactttgacgtcgtcaatgttgcagatccggagacatgagtattccggagacttgaatatagtcata 23637934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 904378 - 904478
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||| | ||| || ||||||||| |||||||||  | |||||||||||||| |||||| |||||  ||| |||||| |||||  | |||||||||||    
T  904378 gtcttagcgcgacattagtttgttcgccgtctttgtgtgacgttgtttgtctttcttgttttgttcaactatatgttcggttcagactgtcagatcagct 904477  T
Q  259 t 259  Q
    |    
T  904478 t 904478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 23067870 - 23067691
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||||| |||||||  |||| |||||| ||| ||    
T  23067870 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 23067771  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| || |||||||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| |||| || ||||||    
T  23067770 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagattcggagacat 23067691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 161 - 348
Target Start/End: Complemental strand, 46716897 - 46716707
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||| ||| |||||||||||||||||||||||||| || |||||||||||||| |||||||  |||| |||||| ||| ||||| || ||||||||||||    
T  46716897 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctt 46716798  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
     ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| ||| || | |  | |||||| || ||||||||||||    
T  46716797 cgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagatatggctattccggagatttaaatatagtcata 46716707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 29577126 - 29576934
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    |||||||||  |||| | |||||||| ||||||||| ||||||||||||||| ||||||||||||||| |||||||||| ||||| || ||| ||| |||    
T  29577126 gtcttagtgcaacgtagttttgttcgacgtctttgtgcggcgttgtttgtcttttttgtttcgttcaggtatttgttcggttcagattgtcatatcggct 29577027  T
Q  259 t-gatccagtgtagatccaa--aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | ||||||| | | ||||||  |||||| |||||||||||| |||||| ||||||||||||||   |  | ||||||||||||||||||||||    
T  29577026 tagatccagcgcatatccaatcaaatgattttggcgtcgtcaacgttgcagatccgaagacatgaatattccggagacttgaatatagtcata 29576934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 147 - 348
Target Start/End: Original strand, 38434696 - 38434899
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||||||| |||||||||||||||||| || |||||||||||||| ||||||||||||| ||||||||| |||||| |    
T  38434696 ttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtccgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagat 38434795  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    |   |||||||||| ||||||||| ||||  ||  ||||||||||| |||||| |||||| |||||||  ||||| |||  | ||||||||| |||||||    
T  38434796 tactagatcagcttcgatccagtgcagataaaatcaatgactttggagtcgtcaacgttgcagatccg-ggacatgggtattccggagacttaaatatag 38434894  T
Q  344 tcata 348  Q
    |||||    
T  38434895 tcata 38434899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 147 - 348
Target Start/End: Complemental strand, 46728937 - 46728733
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||| ||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||| ||||| |    
T  46728937 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagat 46728838  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | |||||||||||| ||||||||| ||||| ||  ||||||||||  |||||| |||||| | || || |||||| |||  | | ||||||| |||||||    
T  46728837 tgtcagatcagcttcgatccagtgcagatcaaatcaatgactttgaagtcgtcaacgttgcaaattcggagacatgggtattccagagacttaaatatag 46728738  T
Q  344 tcata 348  Q
    |||||    
T  46728737 tcata 46728733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 311
Target Start/End: Original strand, 14346543 - 14346695
Alignment:
Q  162 cttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt- 259  Q
    ||||||| ||||||| ||||||||||||| |||| || |||||||||||||| ||||||||||||| |||||| ||||||||| || ||||||||||||     
T  14346543 cttagtgcgacgttgttttgttcgtcgtcgttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgctcgattcagattgtcagatcagcttc 14346642  T
Q  260 gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||||||||| | ||| ||  ||||||||||| |||||| |||||| |||||||    
T  14346643 gatccagtgcaaatcaaatcaatgactttggagtcgtcaacgttgcagatccg 14346695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 348
Target Start/End: Complemental strand, 15729998 - 15729794
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || ||||||||| |||| ||||||||||||| |||||||||  ||||| |    
T  15729998 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcagttcagat 15729899  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | |||||||| ||| ||||||||| ||||| ||  ||||| ||||| |||||| | |||| |||| || |||||| |||  ||||||||||| |||||||    
T  15729898 tgtcagatcaacttcgatccagtgcagatcaaatcaatgattttggagtcgtcaatgttgcagattcggagacataggtatttcggagacttaaatatag 15729799  T
Q  344 tcata 348  Q
    |||||    
T  15729798 tcata 15729794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 344
Target Start/End: Original strand, 2945229 - 2945434
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttttt-gtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  ||| ||||| ||||||||||||||| |||||| | | |||| ||||| || ||||| ||||||||||| |||||||||| ||    
T  2945229 ttattttgtgatttcatcgtcatagtgcgacgttggtttgttcatcgtctgtatgcggcattgttagtgttttttgtttcgttcaggtatttgttcggtt 2945328  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||| || ||||||||  || ||||||||| |||  |||  |||||||||||||||||  || ||| ||||||| |||||| |||  ||||||||||||||    
T  2945329 cagattgtcagatcaatttcgatccagtgaagacacaatcaatgactttggcgtcgttaacattgcagatccggagacataggtatttcggagacttgaa 2945428  T
Q  339 tatagt 344  Q
    ||||||    
T  2945429 tatagt 2945434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 29474334 - 29474141
Alignment:
Q  159 tgtcttagtgtg-acgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcag 256  Q
    |||||||||||| || ||| |||||||||||||||||| || |||||||||  ||| ||||||||||||| |||||||||| ||||| || ||||| ||     
T  29474334 tgtcttagtgtgtaccttgttttgttcgtcgtctttgtgcgacgttgtttgcttttcttgtttcgttcaggtatttgttcggttcagattgtcagaccat 29474235  T
Q  257 ctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||| ||||||||| ||||| ||  ||||||||||| |||||| |||||| ||||||| |||||| |||  | ||||| ||| ||||||||||||    
T  29474234 cttcgatccagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccggaggcttaaatatagtcata 29474141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 311
Target Start/End: Original strand, 4634380 - 4634547
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||||| |    
T  4634380 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagat 4634479  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    | |||||||||||| ||||||||| ||||||||  ||||||||||| ||| ||||||||| |||||||    
T  4634480 tgtcagatcagcttcgatccagtgcagatccaatcaatgactttggtgtcatccacgttgcagatccg 4634547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 9661945 - 9662154
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||    
T  9661945 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagtt 9662044  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttc-ggagacttga 337  Q
    ||| || | |||||||||| ||||||||| |||| |||  ||||||||||||||| ||||||||| ||||||| | ||| ||||| ||| ||||| || |    
T  9662045 cagattgttagatcagcttcgatccagtgcagatgcaatcaatgactttggcgtcatccacgttgcagatccggataca-tggttattctggagatttaa 9662143  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  9662144 atatagtcata 9662154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 173 - 313
Target Start/End: Original strand, 3169549 - 3169692
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgta 270  Q
    ||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||  || ||||||||||||  |||||||| |    
T  3169549 gttgggttgttcgttgtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgttcggttcaaattgtcagatcagcttcaatccagtgca 3169648  T
Q  271 gatccaa-aaatgactttggcgtcgtccacgttgtagatccgaa 313  Q
    ||| |||  ||||||||| ||||| ||||| ||| |||| ||||    
T  3169649 gattcaatcaatgactttcgcgtcatccactttgcagattcgaa 3169692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 316
Target Start/End: Complemental strand, 7242773 - 7242614
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||| | |||||||||||||||||| ||  ||||||||||||| || |||||||||  |||||||||| ||||| || ||||| || ||    
T  7242773 gtcttagtgcgacgtcgatttgttcgtcgtctttgtgcgaagttgtttgtctttcttatttcgttcaagtatttgttcggttcagattgtcagaccaact 7242674  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagac 316  Q
    | |||| ||   |||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  7242673 ttgatctaggccagatccaataaatgactttggcgtcgtccacgttgcagatccggagac 7242614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 14542534 - 14542325
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||    
T  14542534 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagtt 14542435  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| ||||||||| ||||||||  ||||||||||  ||| ||||| ||| ||||||| | ||| ||||| || |||||| || |    
T  14542434 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttgttgtcatccactttgcagatccggataca-tggttattccggagatttaa 14542336  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  14542335 atatagtcata 14542325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 164 - 318
Target Start/End: Original strand, 28990412 - 28990569
Alignment:
Q  164 tagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-ga 261  Q
    ||||| ||||||||||||||||| |||||||| ||| ||||| ||||||| |||||||||||||  ||||||||  ||||| || |||||| ||||| ||    
T  28990412 tagtgcgacgttggtttgttcgttgtctttgtgcggtgttgtctgtctttcttgtttcgttcaggcatttgttccgttcagattgtcagattagcttcga 28990511  T
Q  262 tccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    || |||| | ||||||  ||||| |||| |||||||||||||| ||||| ||||||||    
T  28990512 tctagtgcatatccaatcaatgattttgacgtcgtccacgttgcagatctgaagacat 28990569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 42972148 - 42972309
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| |||||||||||||||||||||||| | || |||| ||| ||||| |||||||  |||| |||||| ||| ||||| || |||||||| ||    
T  42972148 gtcttcgtgcgacgttggtttgttcgtcgtctttatgcgacgttatttttctttcttgtttctctcaggtatttgatcggttcagattgtcagatcaact 42972247  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||||||||| ||||||||  |||||||||| |||| ||||||||| ||||||| ||||||    
T  42972248 tcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggagacat 42972309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 309
Target Start/End: Original strand, 32189077 - 32189241
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| | |||| | | ||||| |    
T  32189077 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgattggttcagat 32189176  T
Q  246 tttcagatcagcttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatc 309  Q
    | ||||||||||||   |||||| ||||||||  ||||||||||||||| ||||||||| |||||    
T  32189177 tgtcagatcagcttcgaccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatc 32189241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 46775873 - 46775742
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttttt-gtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||||||||||| ||  |||||||| ||||| ||||||||||||||||||| | ||||||||  |||||||||||||||| |    
T  46775873 ttgtgatttcgtcgtcttagtgtgacgttgtttaattcgtcgt-tttgtgcggcgttgtttgtcttttttgcttcgttcatgtatttgttcgattcagat 46775775  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa 277  Q
    | |||||||||||| |||| |||| ||||||||    
T  46775774 tgtcagatcagcttcgatctagtgcagatccaa 46775742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 142 - 318
Target Start/End: Original strand, 12519748 - 12519927
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||||||| |||||||||||||||||||| ||||| ||  |||| |||||||| |||| |||||||| |||||||| | ||    
T  12519748 ttattttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggtt 12519847  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||  || |||||||| ||| |||| |||| ||||||||  |||||| || |||||||||| |||| ||||||| ||||||    
T  12519848 caaattgtcagatcaacttcgatctagtgcagatccaatcaatgacattagcgtcgtccatgttgcagatccggagacat 12519927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 318
Target Start/End: Complemental strand, 33020942 - 33020770
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggtt 246  Q
    |||||||||||   |||||||| |||| || |||||| ||||||||||| ||||||||||||||||||   || ||| || | | |||||||||||| ||    
T  33020942 ttgtgatttcatcatcttagtgcgacgctgttttgtttgtcgtctttgtgcggcgttgtttgtcttttccctt-gttgaggtgtctgttcgattcagatt 33020844  T
Q  247 ttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
     ||||||||| || ||||||||| | ||||||  ||||||||||||||| || ||||||||||| || ||||||    
T  33020843 gtcagatcagtttcgatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgtagattcggagacat 33020770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 348
Target Start/End: Complemental strand, 26576495 - 26576316
Alignment:
Q  171 acgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtg 268  Q
    |||||| |||||| |||||| |||| || | ||||||||||||  |||||||||||| |||||||||||||||| || ||| |||||||| |||| ||||    
T  26576495 acgttgttttgtttgtcgtcgttgtgcgac-ttgtttgtctttcctgtttcgttcaggtatttgttcgattcagattgtcaaatcagcttcgatctagtg 26576397  T
Q  269 tagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
     ||||| ||  ||||||||||| |||||| ||| || ||||||||||||||  ||  | ||||||||  ||||||||||||    
T  26576396 cagatcaaatcaatgactttggagtcgtcaacgatgcagatccgaagacatgagtattccggagactcaaatatagtcata 26576316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 30470126 - 30469936
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| |||||||||| ||| ||||||||||| || |||||||||| ||| |||||||  |||| | |||| ||| ||||| || |||||||||||    
T  30470126 gtcttcgtgcgacgttggtt-gtttgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcagatcagct 30470028  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    | |||| |||| ||||||||  ||||||||||||||| ||||||||| ||||||| | ||| ||||| || |||||| || ||||||||||||    
T  30470027 tcgatctagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaaca-tggttattccggagatttaaatatagtcata 30469936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 40859783 - 40859894
Alignment:
Q  159 tgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc 257  Q
    |||||| ||| |||| || |||||||||||||||||| || |||||||||||||| |||||| |||| | |||||||||| ||||| || ||||||||||    
T  40859783 tgtctttgtgcgacgctgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcagatcagc 40859882  T
Q  258 tt-gatccagtg 268  Q
    || |||||||||    
T  40859883 ttcgatccagtg 40859894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 348
Target Start/End: Original strand, 51646222 - 51646398
Alignment:
Q  178 tttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatcc 275  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||| |||  |||||||||| ||||| || |||||||||||| ||||||||| |||||     
T  51646222 tttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgctcaagtatttgttcggttcagattatcagatcagcttcgatccagtgcagatca 51646321  T
Q  276 aa-aaatgactttggcgtcgtccacgtt---gtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||   ||||||||||  ||||| |||||   | |||||||||||||| |||  | | ||||||| ||||||||||||    
T  51646322 aatcgatgactttggaatcgtcaacgttgcagcagatccgaagacatgggtattccagagacttaaatatagtcata 51646398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 30416597 - 30416444
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc-tttttgtttcgttcagatatttgttcgattcaggttttcagatcagc- 257  Q
    ||||| ||| ||||||| |||||||||||||||||  || |||||||| || ||||||||| |||  | |||||||||| ||||| || ||||||||||     
T  30416597 gtctttgtgcgacgttgttttgttcgtcgtctttgcgcgacgttgtttctcttttttgttttgtttgggtatttgttcggttcagattgtcagatcagct 30416498  T
Q  258 ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatcc 310  Q
    ||||||||||| ||||| ||  ||||||||||| ||| || |||||| ||||||    
T  30416497 ttgatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatcc 30416444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 43156873 - 43156986
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   |||||||||  |||||| ||||||||||| |||||| || |||||||||||||| ||||||| ||||| |||||||||| ||||| |    
T  43156873 ttgtgatttcgtcgtcttagtgcaacgttgttttgttcgtcgactttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcggttcagat 43156972  T
Q  246 tttcagatcagctt 259  Q
    | | ||||||||||    
T  43156973 tgttagatcagctt 43156986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 1645546 - 1645462
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcag 256  Q
    ||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| | ||||  || |||||||||    
T  1645546 gttgggttgttcgttgtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgtttggttcaaattgtcagatcag 1645462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 348
Target Start/End: Original strand, 16991985 - 16992173
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-g 260  Q
    |||||||||||||| |||||| ||||||||||| || ||||||||| |||| |||||| |||||| ||||  |||| ||||| || |||||||||||| |    
T  16991985 ttagtgtgacgttgttttgtttgtcgtctttgtgcgacgttgtttgcctttcttgttttgttcaggtattctttcggttcagattatcagatcagcttcg 16992084  T
Q  261 atccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||| | ||| ||  ||||||||||  |||||  || ||| ||||||| |||||| |||  | | ||||||| ||||| ||||||    
T  16992085 atccagtgcatatcaaatcaatgactttgaagtcgtaaacattgcagatccggagacatgggtattccagagacttaaatattgtcata 16992173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 34115673 - 34115469
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattc 241  Q
    |||| ||||||||||   ||||| ||| ||||||||| ||||||| |||||||| || |||| |||    |||||||||  | || |||||| ||| |||    
T  34115673 ttattttgtgatttcgtcgtcttcgtgcgacgttggtatgttcgttgtctttgtgcgacgtttttt----ttttgtttctcttaggtatttgatcggttc 34115578  T
Q  242 aggttttcagatcagcttga-tccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaa 338  Q
    || || |||||||||||| | ||||||||||||||||  ||||| ||||||||| || |||||| ||||||| ||||| ||||| || |||||| || ||    
T  34115577 agattgtcagatcagcttcaatccagtgtagatccaatcaatgattttggcgtcatcaacgttgcagatccggagaca-tggttattccggagatttaaa 34115479  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  34115478 tatagtcata 34115469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 310
Target Start/End: Complemental strand, 9474533 - 9474390
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||||||||||||||||||| || |||||||||| ||| |||||||  | || |||||| | | ||||| || || ||||| ||| ||||||||    
T  9474533 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgattggttcagattgtctgatcaacttcgatccagt 9474434  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatcc 310  Q
    ||||||||||  |||||||||| |||| ||||| ||| ||||||    
T  9474433 gtagatccaatcaatgactttgacgtcatccacattgcagatcc 9474390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 318
Target Start/End: Complemental strand, 37869411 - 37869260
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||||||| || |||||||| || |||| ||| | ||| |||||||  | || |||||| ||  ||||| || |||||||||||| ||||||||    
T  37869411 gacgttggtttgtttgttgtctttgtgcgacgttatttatttttcttgtttctctaaggtatttgatcagttcagattgtcagatcagcttcgatccagt 37869312  T
Q  268 gtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | | ||||||  ||||||||||||||| ||||||||| ||||||||||||||    
T  37869311 gcaaatccaatcaatgactttggcgtcatccacgttgcagatccgaagacat 37869260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 347
Target Start/End: Complemental strand, 4959577 - 4959388
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||  ||| ||| ||||||||| || ||||| || |||||||||||||| |||||||||||   |||||||||| |||    | |||||||||||    
T  4959577 gtcttagtacgacattgttttgttcgttgtttttgtgcgacgttgtttgtctttcttgtttcgttcctgtatttgttcggttcgaaatgtcagatcagct 4959478  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    | |||  |||| ||||||||  ||||||||||||||||||  ||||| ||||||| |||||| |||  | || ||||||||||||||||||    
T  4959477 tagatt-agtgcagatccaatcaatgactttggcgtcgtcagcgttgcagatccggagacatgggtattccgtagacttgaatatagtcat 4959388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 319
Target Start/End: Complemental strand, 6789868 - 6789718
Alignment:
Q  172 cgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgt 269  Q
    |||| ||||||||||||||||||| || | |||||||||||| |||||||||| || ||||||||| ||||||  | |||||||||||| |||||   |     
T  6789868 cgtttgtttgttcgtcgtctttgtgcgccattgtttgtctttcttgtttcgttaaggtatttgttcaattcagaatgtcagatcagcttcgatcctacgc 6789769  T
Q  270 agatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacatt 319  Q
    ||||||||  |||||||||||| || |||| |||| ||||  |||||||||    
T  6789768 agatccaatcaatgactttggcatcatccatgttgcagattagaagacatt 6789718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 308
Target Start/End: Original strand, 20961541 - 20961709
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgtt-gtttgtctttttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  ||||| ||| |||||||| ||||||||| |||||||||| |||| |||| || | |||||||  |||| |||||| ||| ||    
T  20961541 ttattttgtgatttcatcgtcttcgtgcgacgttgg-ttgttcgtcatctttgtacgacgttggtttttcgtcttgtttctctcaggtatttgatcgctt 20961639  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagat 308  Q
    ||| || |||||||| ||| ||||||||| |||| |||  |||||||||| |||| ||||||||| ||||    
T  20961640 cagattgtcagatcaacttcgatccagtgcagattcaatcaatgactttgacgtcatccacgttgcagat 20961709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 41486685 - 41486846
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| || ||||||||||||||||||||||| |  |||||||||| ||| |||||||  |||| |||||| ||| ||||| || ||| || ||||    
T  41486685 gtctttgtgcgatgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcagctatttgatcggttcagattgtcaaattagct 41486784  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||| ||||| | ||||||  ||||||||||||||| ||||||||| ||||| | ||||||    
T  41486785 tcgatacagtgcaaatccaatcaatgactttggcgtcatccacgttgcagatctggagacat 41486846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 348
Target Start/End: Complemental strand, 1657583 - 1657379
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||| ||| |||||||||| ||||| |||| | |  ||| ||||  |||||| ||| || |||||||||||||||| |    
T  1657583 ttgtgatttcgtcgtcttagtgcgacattgttttgttcgtcatctttatacgacatcatttatcttccttgttttgtttaggtatttgttcgattcagat 1657484  T
Q  246 tttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
      |||||| ||||| ||||||||| | ||| ||  ||||||||||| |||||| |||||| ||||||| |||||| |||  | | ||||||| |||||||    
T  1657483 agtcagattagcttcgatccagtgcaaatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccagagacttaaatatag 1657384  T
Q  344 tcata 348  Q
    |||||    
T  1657383 tcata 1657379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 344
Target Start/End: Complemental strand, 31601352 - 31601173
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcag--atatttgttcgattcaggttttcagatcagctt-gatcca 265  Q
    |||||||||||||||||||||||||| || | |||||| ||||| |||||||  ||||  ||||||| | | ||||| || |||||||| ||| ||||||    
T  31601352 gacgttggtttgttcgtcgtctttgtgcgacattgtttatctttcttgtttctctcaggtatatttgattggttcagattgtcagatcaacttcgatcca 31601253  T
Q  266 gtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagt 344  Q
    ||| ||||||||  |||||||||| |||| ||||||||| ||| ||  |||||| | |  |||||||| || ||||||||    
T  31601252 gtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagagacatggttatttcggagatttaaatatagt 31601173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 29589365 - 29589174
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||||| |||||| || |||||||| || | ||||||||| || ||||||||||||| |||||||||  ||||| || |  ||||| ||    
T  29589365 gtcttagtgcgacgttgttttgtttgttgtctttgtgcgaccttgtttgtcattcttgtttcgttcaggtatttgttcatttcagattgtttgatcaact 29589266  T
Q  259 t-gatccagtgtagatcca-aaaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | ||||||||| ||||| |   ||||||||||| ||| || |||||| ||||||| ||||||  ||  |  |||||||| ||||||||||||    
T  29589265 tcgatccagtgcagatcaactcaatgactttggagtcttcaacgttgcagatccggagacatgagtattctggagacttaaatatagtcata 29589174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 302
Target Start/End: Original strand, 53903713 - 53903836
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-a 278  Q
    ||||||||||| ||||| |||||||||| |||  ||||||  |||| |||||| ||| ||||| ||  ||||||||||| ||||||||| ||||||||      
T  53903713 ttcgtcgtcttcgtacgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagattgccagatcagcttcgatccagtgcagatccaatc 53903812  T
Q  279 aatgactttggcgtcgtccacgtt 302  Q
    ||||||||||||||| ||||||||    
T  53903813 aatgactttggcgtcatccacgtt 53903836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 30416636 - 30416578
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||| || ||||||||    
T  30416636 gtgatttcgctgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgttt 30416578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 44021575 - 44021424
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc- 257  Q
    |||||| |||||||||||||||||||||||||||   |||| |||||||||||| |||||||||||          ||| ||||| || ||||| || |     
T  44021575 gtcttaatgtgacgttggtttgttcgtcgtctttaagcggcattgtttgtctttcttgtttcgttc----------tcggttcagattgtcagaacaact 44021486  T
Q  258 ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||||| ||||| ||||||||  |||||||||| |||||||||||||| ||||||| ||||||    
T  44021485 ttgattcagtgcagatccaattaatgactttgacgtcgtccacgttgcagatccggagacat 44021424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 52555714 - 52555583
Alignment:
Q  190 ctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactt 286  Q
    ||||||||| |||||||||||||| |||||||  | || |||||  ||| ||||| || ||| |||||||| ||||||||| ||||||||  ||||||||    
T  52555714 ctttgtacgacgttgtttgtctttcttgtttctcttaggtatttaatcggttcagattgtcaaatcagcttcgatccagtgcagatccaatcaatgactt 52555615  T
Q  287 tggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||||||| |||| |||| |||| || ||||||    
T  52555614 tggcgtcatccatgttgcagattcggagacat 52555583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 30202276 - 30202345
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttc-ggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| ||||| || || ||| |||||||||||||||||||||    
T  30202276 aatgactttggcgtcgtcaacgttgcagatccggagaca-tgattattctggagacttgaatatagtcata 30202345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 35338504 - 35338582
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcg 237  Q
    ||||||||| |||||   |||||||||| ||||||| |||||||  |||||||| |||||| |||||||||||||||||    
T  35338504 gtcttagtgggacgtcaatttgttcgtcatctttgtgcggcgttacttgtctttcttgttttgttcagatatttgttcg 35338582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 310
Target Start/End: Original strand, 1125055 - 1125204
Alignment:
Q  164 tagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-ga 261  Q
    ||||| || |||| |||||  ||||||||| | || ||||| |||||||| ||||||||||||| |||||||| | ||||  || |||||||||||| ||    
T  1125055 tagtgcgatgttgttttgtctgtcgtctttttgcgacgttgattgtctttcttgtttcgttcaggtatttgtttggttcaaattgtcagatcagcttcga 1125154  T
Q  262 tccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatcc 310  Q
    ||||||| ||||| ||  ||||| ||||  |||||| |||||| ||||||    
T  1125155 tccagtgcagatcaaatcaatgattttgaagtcgtcaacgttgaagatcc 1125204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 5388625 - 5388786
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||||||| ||| |||| | ||||||||||| ||| ||||||||||||||   | | ||| || | |||||| || |||| || ||||||||| |    
T  5388625 gtcttagtgtgacattgttttggttgtcgtctttgtgcggtgttgtttgtcttttccctcttgtttaggtgtttgtttgaatcagattgtcagatcagat 5388724  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||||||||| | ||| ||  |||||||||| |||| || |||||||||||||| ||||||    
T  5388725 tcgatccagtgcaaatcgaaccaatgactttgacgtcatcaacgttgtagatccggagacat 5388786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 26674610 - 26674679
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||||||||||  ||  ||||||||| | |||| |||||||    
T  26674610 aatgactttggcgtcgtcaacgttgcagatccgaagacatgagtatttcggagacataaatacagtcata 26674679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 43244264 - 43244195
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||| ||||| |||||| ||||||| ||||||  ||  ||||||||| ||||||||||||||    
T  43244264 aatgactttggcatcgtcaacgttgcagatccggagacatgagtatttcggagacatgaatatagtcata 43244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 9526297 - 9526190
Alignment:
Q  211 tttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagat 308  Q
    ||||| |||||||||  |||||||||||||||  || ||| ||||| || ||||||||| ||||  || ||||||| ||||||||||| |||||| ||||    
T  9526297 tttttatttcgttcaagtatttgttcgattcaaattatcatatcagtttcgatccagtgcagatataataaatgacgttggcgtcgtcaacgttgcagat 9526198  T
Q  309 ccgaagac 316  Q
    | ||||||    
T  9526197 ctgaagac 9526190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 9781771 - 9781728
Alignment:
Q  200 cgttgtttgtctttttgtttcgttcagatatttgttcgattcag 243  Q
    |||||||||||||||||||| |||||| |||||||||| |||||    
T  9781771 cgttgtttgtctttttgttttgttcaggtatttgttcggttcag 9781728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 31311700 - 31311763
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatata 342  Q
    |||||||||| |||| ||||||||| ||||||| ||||||  ||  ||||||||||||||||||    
T  31311700 aatgactttgtcgtcatccacgttgcagatccggagacatatgtatttcggagacttgaatata 31311763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 348
Target Start/End: Complemental strand, 54420723 - 54420553
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt--gatccagtgtagatccaa- 277  Q
    |||||||||||||| || |||||||||| ||| |||||||  | || |||||| ||| ||||| || |||||||| |||  |||| |||| |||| |||     
T  54420723 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctgaggtatttgatcgcttcagattgtcagatcaactttcgatctagtgcagattcaat 54420624  T
Q  278 aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
     |||||||||| |||| ||||||||| ||||||| | |||| | |  | |||||| || ||||||||||||    
T  54420623 caatgactttgacgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcata 54420553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 22757332 - 22757401
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| | ||||| ||||||  ||  | ||||||| ||||||||||||||    
T  22757332 aatgactttggcgtcgtcaacgttgcaaatccggagacatgagtattccggagacatgaatatagtcata 22757401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 24611683 - 24611614
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| | ||| ||||||||  ||  | |||||||||||||||| |||||    
T  24611683 aatgactttggcgtcgtcaacgttgcaaatctgaagacataagtattccggagacttgaatataatcata 24611614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 44375286 - 44375213
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttttt 215  Q
    |||| ||||||||||   ||||| ||| |||||| ||||||||||||||| ||| || |||| |||||||||||    
T  44375286 ttattttgtgatttcgtcgtcttcgtgcgacgttcgtttgttcgtcgtctgtgtgcgacgttatttgtcttttt 44375213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 47466015 - 47466064
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||| |||| || |||||| |||||||||||||||| ||||||||    
T  47466015 gtcttagtgcgacgatgttttgtttgtcgtctttgtacggcattgtttgt 47466064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 47704349 - 47704297
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    |||||||| ||||||| |||||||| ||||||||||||   ||||||||||||    
T  47704349 tcttagtgcgacgttgttttgttcgccgtctttgtacgatattgtttgtcttt 47704297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 5548 - 5339
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||||| |||||||  |||| |||||| ||| ||    
T  5548 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 5449  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||  || ||| |||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||| |||||| | |  | |||||| || ||    
T  5448 catattgtcatatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaa 5349  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  5348 tatagtcata 5339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 8054829 - 8054651
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||||| |||||||  |||| |||||| ||| ||    
T  8054829 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 8054730  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||| || |||||||||||| ||||||||| ||||||||  ||||||||||||||| ||||| ||| ||||||| ||||||    
T  8054729 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccac-ttgcagatccggagacat 8054651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 308
Target Start/End: Original strand, 37659063 - 37659227
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||  |||||||||| ||| ||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||  |||||||||| ||||| |    
T  37659063 ttgtgatttcgttgtcttagtgcgaccttgttttgttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaagtatttgttcggttcagat 37659162  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagat 308  Q
    | |||||||||||| ||||||||| ||||| ||  ||||||||||  |||||| |||||| ||||    
T  37659163 tgtcagatcagcttcgatccagtgcagatcaaatcaatgactttgaagtcgtcaacgttgcagat 37659227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 12244219 - 12244033
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc-tttttgtttcgttcagatatttgttcgattcaggttttcagatcagc-t 258  Q
    |||||||| ||||||| ||||||||||  |||||| |||||||||||||| |||||||||||||||| |||||||||||||||| || ||| |||||| |    
T  12244219 tcttagtgcgacgttgttttgttcgtcaactttgtgcggcgttgtttgtcgtttttgtttcgttcaggtatttgttcgattcagattgtcatatcagctt 12244120  T
Q  259 tgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagt 344  Q
    ||||||| || ||||||||  ||||||||||  |||||| | |||| || |||| ||| || |||  | | ||||||||||||||||    
T  12244119 tgatccaatgcagatccaatcaatgactttgatgtcgtcaatgttgcagttccggagatatgggtattccagagacttgaatatagt 12244033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 41996637 - 41996844
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  ||||| ||| |||||||||||||||||||||||||| || |||  ||||||||| ||| |||  |||| |||||| ||| ||    
T  41996637 ttattttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgt--tttgtctttcttgattctctcaggtatttgatcggtt 41996734  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||| || |||||||||||| ||| ||||| ||||||||  ||||||||||||||| ||||||||| ||||||| |||||| | |  | |||||| || ||    
T  41996735 cagattgtcagatcagcttcgattcagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatagctattccggagatttaaa 41996834  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  41996835 tatagtcata 41996844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 44295408 - 44295617
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||    
T  44295408 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagtt 44295507  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| ||||||||| ||||||||  |||||||||| |||| ||||||||| ||||||| | ||| ||||| || |||||| || |    
T  44295508 cagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggataca-tggttattccggagatttaa 44295606  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  44295607 atatagtcata 44295617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 345
Target Start/End: Original strand, 15665649 - 15665837
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| || ||||  ||||| ||||||||||| | ||||||||||||| |  ||||| |||||| |||||||||| ||||| || |||| ||||||    
T  15665649 gtcttagtgagatgttgtgttgtttgtcgtctttgtgcagcgttgtttgtctatcctgttttgttcaggtatttgttcggttcagattgtcaggtcagct 15665748  T
Q  259 t-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtc 345  Q
    | ||||||||| ||||||||  ||||||||||| ||| ||  ||||| ||||||| |||||| |||  |||||||||||||||||||||    
T  15665749 tagatccagtgcagatccaatcaatgactttggtgtcatcagcgttgcagatccggagacatgggtatttcggagacttgaatatagtc 15665837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 161 - 320
Target Start/End: Complemental strand, 14115831 - 14115669
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||| ||||||||||||||||||||| |||||| | ||   |||||||| ||| |||||||  |||| |||||| ||| ||||| || ||||||||||||    
T  14115831 tcttcgtgtgacgttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctt 14115732  T
Q  260 -gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattg 320  Q
     ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||| ||||||||||    
T  14115731 cgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctgaagacattg 14115669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 26937635 - 26937735
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| | ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| ||||| |||| ||||| || |||||||||||    
T  26937635 gtcttagtgcgtcgttggtttgttcgtcgactttgtgcggcgttgtttgtctttcttgtttcgttcaggtatttattcggttcagattgtcagatcagct 26937734  T
Q  259 t 259  Q
    |    
T  26937735 t 26937735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 32412882 - 32413054
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||||||||||||||   ||||| ||| ||||||||||||||| |||||||||| ||  ||||||||| ||| ||||||| ||||| |||||| | | ||    
T  32412882 ttatcttgtgatttcgtcgtcttcgtgcgacgttggtttgttcatcgtctttgtgcgatgttgtttgtttttcttgtttctttcaggtatttgattggtt 32412981  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||| || |||||||||||| ||||| ||| ||||||||  ||||||||||||||| || ||||| ||||||||    
T  32412982 cagattgtcagatcagcttcgatcctgtgcagatccaatcaatgactttggcgtcatctacgttatagatccg 32413054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 5917746 - 5917562
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| |||||||  ||||||||||||||||| || ||||||||||||||  | ||| |||||| |||||||||| ||||| || |||||          
T  5917746 gtcttagtgcgacgttgtgttgttcgtcgtctttgtgcgacgttgtttgtctttcctattttgttcaggtatttgttcggttcagattgtcaga------ 5917653  T
Q  259 tgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||| ||||||||  ||||||||||||||||||  | ||| ||| |||||||||| |||  || ||||||||||||||| |||||    
T  5917652 tgatccagtgcagatccaatcaatgactttggcgtcgtcagcattgcagacccgaagacatgggtattttggagacttgaatatattcata 5917562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 5457163 - 5457372
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| |||||||||||| || || |||||||||||||| |||||||  |||  |||||| ||| ||    
T  5457163 ttattttgtgatttcgtcgtcttcgtgcgacgttggttagttcgtcgtcttcgtgcgacgttgtttgtctttcttgtttctctcaagtatttgatcggtt 5457262  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||| || |||||||||||| |||| |||| ||||||||  ||| |||||| |||| ||||||||| ||||||| |||||| | |  | |||||| || ||    
T  5457263 cagattgtcagatcagcttcgatctagtgcagatccaatcaataactttgccgtcatccacgttgcagatccggagacatggctattccggagatttaaa 5457362  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  5457363 tatagtcata 5457372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 277
Target Start/End: Original strand, 9270113 - 9270250
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||  |||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  9270113 ttattttgtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggtt 9270212  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa 277  Q
    ||| || ||| |||||||| ||||||||| ||||||||    
T  9270213 cagattgtcatatcagcttcgatccagtgcagatccaa 9270250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 26582910 - 26582793
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattc 241  Q
    |||| ||||||||||  |||||||||| || |||||||| ||||||| |||||| |   ||||||||| || ||||||||||| ||||||||||||||||    
T  26582910 ttattttgtgatttcgttgtcttagtgcgatgttggtttattcgtcgactttgtgcattgttgtttgttttcttgtttcgttcggatatttgttcgattc 26582811  T
Q  242 aggttttcagatcagctt 259  Q
    || || ||||||||||||    
T  26582810 agattgtcagatcagctt 26582793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 147 - 253
Target Start/End: Complemental strand, 12248731 - 12248624
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || |||||||||||||| ||||||| ||||| |||||||||||||||| |    
T  12248731 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagat 12248632  T
Q  246 tttcagat 253  Q
    | ||||||    
T  12248631 tatcagat 12248624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 311
Target Start/End: Original strand, 23766867 - 23767004
Alignment:
Q  178 tttgttcgtcgtctttgtacggcgttgtttg--tctttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatc 274  Q
    |||||||||||||||||| || |||||||||  | |||||| ||| ||||  |||||||||||||||| || |||||||||||| ||||||||||||||     
T  23766867 tttgttcgtcgtctttgtgcgacgttgtttgtatttttttggttcattcatgtatttgttcgattcagattgtcagatcagcttcgatccagtgtagatt 23766966  T
Q  275 caa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
     ||  ||||||||||| |||||| |||||| |||||||    
T  23766967 aaatcaatgactttggagtcgtcaacgttgcagatccg 23767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 147 - 348
Target Start/End: Complemental strand, 16937356 - 16937152
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||| ||| ||||||| |||||||||| || | ||||||| ||||  |||||||||||| ||||||||   ||||| |    
T  16937356 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcatcgtctttgtgcgacattgtttgcctttcgtgtttcgttcaggtatttgtttagttcagat 16937257  T
Q  246 tttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | |||||||||||| ||||||||| | ||| ||  ||||||||||| |||||| |||||| |||||   |||||| |||  | ||||||||| |||||||    
T  16937256 tgtcagatcagcttcgatccagtgcatatcaaatcaatgactttggagtcgtcaacgttgcagatctagagacatgggtattccggagacttaaatatag 16937157  T
Q  344 tcata 348  Q
    |||||    
T  16937156 tcata 16937152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 344
Target Start/End: Original strand, 10042882 - 10043069
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    |||||||||  |||||| ||||||||| ||||| || || |||| ||||||||| ||||||||||||| |||||||||  ||||  || |||||||||||    
T  10042882 gtcttagtgcaacgttgttttgttcgttgtcttagtgcgacgttatttgtctttcttgtttcgttcaggtatttgttcagttcaaattgtcagatcagct 10042981  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagt 344  Q
    | |||| |||| ||||| ||  ||| ||||||| |||||| |||||| ||||||| ||||||  ||  | ||||||||| ||||||||    
T  10042982 tcgatctagtgcagatcaaatcaataactttggagtcgtcaacgttgcagatccggagacatgtgtattccggagacttaaatatagt 10043069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 32256736 - 32256534
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttt 247  Q
    |||||||| | ||||||||| || |||| |||||| ||||||||||| || |||||||||||||| |||||| |||| | |||||||||| || || ||     
T  32256736 gtgatttcgccgtcttagtgcgatgttgttttgtttgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggtttagattg 32256637  T
Q  248 tcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtc 345  Q
    | | |||||||| ||||  ||| ||||| ||  ||||||||||| ||| || |||||| ||||||| |||||  |||  | ||||||||| |||||||||    
T  32256636 ttaaatcagcttcgatcatgtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaagggtattccggagacttaaatatagtc 32256537  T
Q  346 ata 348  Q
    |||    
T  32256536 ata 32256534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 310
Target Start/End: Complemental strand, 1215356 - 1215192
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggtt 246  Q
    ||||||||||   ||||||||||||||||| |||||| ||| ||||||| || |||||||| |||||||  || |||||| |  ||||||||||||| ||    
T  1215356 ttgtgatttcgtcgtcttagtgtgacgttgttttgtttgtcatctttgtgcgacgttgtttatctttttcctt-gttcaggtggttgttcgattcagatt 1215258  T
Q  247 ttcagatcagc-ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatcc 310  Q
     ||| |||||| |||||| |||| ||||||||  |||||||||||| || || |||||| ||||||    
T  1215257 gtcaaatcagctttgatctagtgcagatccaaccaatgactttggcctcatcaacgttgcagatcc 1215192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 308
Target Start/End: Complemental strand, 3925707 - 3925543
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   |||||||||  || ||| ||| |||||||||||||| || | ||||||| |||| ||||||| ||||| |||||||||||||||| |    
T  3925707 ttgtgatttcgtcgtcttagtgcaaccttgtttttttcgtcgtctttgtgcgaccttgtttgcctttcttgtttcattcaggtatttgttcgattcagat 3925608  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagat 308  Q
      |||||||||||| |||| |||| ||||| ||  ||||||||||| |||||| |||||| ||||    
T  3925607 agtcagatcagcttcgatcaagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagat 3925543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 7281149 - 7280942
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctt-tttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||| | ||| ||||| ||| |||||||||||||||||||||| |  | ||||||||||| |||||||| | ||| |||||||||| ||    
T  7281149 ttattttgtgatttcgccgtcatagtgcgacattggtttgttcgtcgtctttgtgcaacattgtttgtcttatttgtttcatgcaggtatttgttcggtt 7281050  T
Q  241 caggttttcagatcagcttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaat 339  Q
     || || ||| ||| ||||   |||||| |||| |||   |||||||| ||||||||||||||| |||||   |||||| |||  | |||| ||||||||    
T  7281049 tagattgtcatatccgcttcgaccagtgcagattcaatctatgacttt-gcgtcgtccacgttgcagatctagagacatgggtattccggatacttgaat 7280951  T
Q  340 atagtcata 348  Q
    |||||||||    
T  7280950 atagtcata 7280942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 303
Target Start/End: Complemental strand, 16996910 - 16996747
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||||||||||||||| || |||||||||| |||  ||||||  |||| |||||| ||| ||    
T  16996910 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcctgtttctctcaggtatttgatcgctt 16996812  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttg 303  Q
    ||| || |||| || |||| ||||||||| ||||||||  ||||||||||||||| |||||||||    
T  16996811 cagattgtcagttcggcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttg 16996747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 31713080 - 31712964
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| || |||| |||||||||||||||||| || |||||||||||||| ||| |||||| || |||||||||| ||||| || ||| |||||||    
T  31713080 gtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcagct 31712981  T
Q  259 t-gatccagtgtagatc 274  Q
    | ||||||||| |||||    
T  31712980 tcgatccagtgcagatc 31712964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 311
Target Start/End: Complemental strand, 37129668 - 37129525
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||| ||||||||||||||| || | |||||||| ||| |||||||  |||| ||||||  || ||||| || |||||||||||| |||| |||    
T  37129668 gacgttggtt-gttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgaacgcttcagattgtcagatcagcttcgatcaagt 37129570  T
Q  268 gtagatccaaa-aatgactttggcgtcgtccacgttgtagatccg 311  Q
    | ||||||||  ||||||||||||||| ||||||||| |||||||    
T  37129569 gcagatccaatcaatgactttggcgtcatccacgttgcagatccg 37129525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 348
Target Start/End: Original strand, 9992762 - 9992967
Alignment:
Q  145 tcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcag 243  Q
    ||||||||||||   ||||| ||| ||||||||||||||||||||||||||  | | |||||||| ||| |||||||  | ||||||||| ||| ||||     
T  9992762 tcttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgtgacattgtttgtttttcttgtttctcttagatatttgatcggttcaa 9992861  T
Q  244 gttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaata 340  Q
     || |||||| |||||  ||||| || ||||||||  || |||||||||||| ||||||||| ||||||| ||||| ||||| || |||||| || ||||    
T  9992862 attgtcagataagcttcaatccaatgcagatccaatcaacgactttggcgtcatccacgttgcagatccg-agaca-tggttattccggagatttaaata 9992959  T
Q  341 tagtcata 348  Q
    ||||||||    
T  9992960 tagtcata 9992967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 147 - 311
Target Start/End: Original strand, 32061891 - 32062058
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtt-tcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| |||| || |||||| ||||||||||| || | |||||||||||||   | | |||||| | |||||||| ||||| |    
T  32061891 ttgtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcgacattgtttgtcttttccctcttgttcaggtgtttgttcggttcagat 32061990  T
Q  246 tttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccg 311  Q
    | |||||||||||| |||| |||| ||||||||  ||||||||||||||| || |||||| |||||||    
T  32061991 tgtcagatcagcttcgatcaagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccg 32062058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 318
Target Start/End: Complemental strand, 11298761 - 11298603
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggttttcagatcagc-ttg 260  Q
    |||||| ||||||| |||||| ||||||||||| ||||||||||||||||||   | | |||||| | ||||||||  |||| || |||||| ||| |||    
T  11298761 ttagtgcgacgttgttttgtttgtcgtctttgtgcggcgttgtttgtcttttccctcttgttcaggtgtttgttcggatcagattgtcagattagctttg 11298662  T
Q  261 atccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    |||||||| ||||||||  ||||||||||||||| |  |||||| | ||||| ||||||    
T  11298661 atccagtgcagatccaaccaatgactttggcgtcataaacgttgcatatccggagacat 11298603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 316
Target Start/End: Original strand, 5989743 - 5989899
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-g 260  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||| || ||||| |||  ||||| |||| ||||| || |||| ||| ||| |    
T  5989743 ttagtgcgacgttggtatgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgctcaagtatttcttcggttcagattgtcaggtcaacttcg 5989842  T
Q  261 atccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagac 316  Q
    || ||||| |||| |||  ||||||||| | |||||| |||||| | ||||| ||||    
T  5989843 attcagtgcagattcaatcaatgacttttgtgtcgtcaacgttgcaaatccggagac 5989899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 303
Target Start/End: Original strand, 17019228 - 17019374
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc- 257  Q
    ||||||||| |||||||||||||||||||||||||| |   ||||||||||||| ||||||| |  |  ||||||||||  |||| ||||||||| | |     
T  17019228 gtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatctaagtatttgttcggatcagattttcagattaact 17019327  T
Q  258 ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttg 303  Q
    |||||||| || ||||||||  ||||| |||||| ||||||| ||||    
T  17019328 ttgatccaatgcagatccaatcaatgattttggcatcgtccatgttg 17019374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 303
Target Start/End: Original strand, 17549665 - 17549811
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc- 257  Q
    ||||||||| |||||||||||||||||||||||||| |   ||||||||||||| ||||||| |  |  ||||||||||  |||| ||||||||| | |     
T  17549665 gtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatctaagtatttgttcggatcagattttcagattaact 17549764  T
Q  258 ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttg 303  Q
    |||||||| || ||||||||  ||||| |||||| ||||||| ||||    
T  17549765 ttgatccaatgcagatccaatcaatgattttggcatcgtccatgttg 17549811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 348
Target Start/End: Complemental strand, 32104832 - 32104650
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||||||| ||| ||||||| |  |||||||||||||| |||||||  |||| |||||| ||| ||||| || ||||||||| || ||||||||    
T  32104832 gacgttggtttgtttgtcatctttgtgcaacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagtttcgatccagt 32104733  T
Q  268 gtagatccaa-aaatgactttg-gcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | |||| |||  ||| ||||||  |||| ||||||||| ||||||| |||||| | |  | |||||| || ||||||||||||    
T  32104732 gcagattcaatcaataactttgaccgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcata 32104650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 19720247 - 19720316
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||| ||||||| |||||| ||||||||||||||  ||  | ||||||||||||||||||||||    
T  19720247 aatgactttgacgtcgtcaacgttgcagatccgaagacatgagtattccggagacttgaatatagtcata 19720316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 14327589 - 14327689
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt-tgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||||| |||||| ||||||||||| || |||||||||||||||   ||| |||||  | |||||||| ||||| || |||||||||||    
T  14327589 gtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcccttttgttcaagtgtttgttcggttcagattgtcagatcagct 14327688  T
Q  259 t 259  Q
    |    
T  14327689 t 14327689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 16938275 - 16938175
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||| ||| | |||||||||| ||||| | ||||||||||||| |||| ||| |||| | |||||||||| ||||||||  ||||||||||    
T  16938275 gtcttagtgcgactttgttgtgttcgtcgtatttgtgctgcgttgtttgtcttttttatttagttcgggtatttgttcggttcaggttgccagatcagct 16938176  T
Q  259 t 259  Q
    |    
T  16938175 t 16938175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 293
Target Start/End: Complemental strand, 18190861 - 18190714
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggtt 246  Q
    ||||||||||   ||||||||| |||  || |||||| || |||||||| || |||||||||||||||   || ||||| || |||||| ||||||| ||    
T  18190861 ttgtgatttcgtcgtcttagtgcgaccctgttttgtttgttgtctttgtgcgacgttgtttgtcttttccctt-gttcaaatgtttgtttgattcagatt 18190763  T
Q  247 ttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtc 293  Q
     ||| |||||||| ||||||||| ||||||||  |||||||||||||||    
T  18190762 gtcaaatcagcttcgatccagtgcagatccaaccaatgactttggcgtc 18190714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 10148183 - 10148252
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||| |||||||| |||||| ||||||| ||||||  ||  ||||||||||| ||||||||||||    
T  10148183 aatgactttagcgtcgtcaacgttgcagatccggagacatgagtatttcggagacttaaatatagtcata 10148252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 16808986 - 16809039
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    |||| |||| |||||||| |||||||| |||||||| |||||||||||||||||    
T  16808986 gtctaagtgggacgttgggttgttcgtggtctttgtgcggcgttgtttgtcttt 16809039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 348
Target Start/End: Original strand, 2629025 - 2629211
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-g 260  Q
    |||||| ||||||  ||||| |||| ||||||| || | |||||||||||| |||||||||||||  ||||||| |  |||| || |||||||||||| |    
T  2629025 ttagtgcgacgttattttgtccgtcatctttgtgcgacattgtttgtctttcttgtttcgttcaggcatttgtttg-gtcagattgtcagatcagcttcg 2629123  T
Q  261 atccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||| ||||| ||  ||||||||||| ||| || |  |||||||| || ||||||  ||  | ||||||||| ||||||||||||    
T  2629124 atccagtgcagatcaaatcaatgactttggagtcctcaatattgtagat-cggagacatgtgtattccggagacttaaatatagtcata 2629211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 31874205 - 31874309
Alignment:
Q  171 acgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtg 268  Q
    ||||||||||||||||||||||||| || | |||||||| ||| |||||||  |||| |||||| ||| ||||| || ||||| || ||| |||||||||    
T  31874205 acgttggtttgttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagaacatcttcgatccagtg 31874304  T
Q  269 tagat 273  Q
     ||||    
T  31874305 cagat 31874309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 27534416 - 27534362
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttt 214  Q
    ||||||||| ||| ||| |||||| ||||||||||| ||||||||||||| ||||    
T  27534416 gtcttagtgcgacattgttttgtttgtcgtctttgtgcggcgttgtttgtgtttt 27534362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 38546039 - 38545977
Alignment:
Q  285 tttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    |||||||||||| |||||| ||||||| ||||||  ||  | |||||||||||||||||||||    
T  38546039 tttggcgtcgtcaacgttgcagatccggagacataagtattccggagacttgaatatagtcat 38545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 7579746 - 7579677
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||| | |||||| ||||||  ||||||  ||  | ||||||||||||||||||||||    
T  7579746 aatgactttggcgtcgccaacgttgcagatccagagacatgagtattccggagacttgaatatagtcata 7579677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 12329865 - 12329934
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| |||||| |||  |||| | || || |||||||||||    
T  12329865 aatgactttggcgtcgtcaacgttgcagatccggagacatgggtatttcgaaaacatggatatagtcata 12329934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 14600589 - 14600520
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||| ||||||| |||||| ||||||  ||||||  ||  | ||||||||||||||||||||||    
T  14600589 aatgactttgacgtcgtcaacgttgcagatccagagacataagtattccggagacttgaatatagtcata 14600520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 23971074 - 23971005
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||| ||||||| |||||| | |||| |||||||  ||  | ||||||||||||||||||||||    
T  23971074 aatgactttgacgtcgtcaacgttgcaaatccaaagacatgagtattccggagacttgaatatagtcata 23971005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 3028171 - 3028247
Alignment:
Q  168 gtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc-tttttgtttcgttcagatatttgttcgattcag 243  Q
    |||| ||||||||||||||||||||| | | || ||||||||| ||||| ||| |||||  |||||||||| |||||    
T  3028171 gtgatgttggtttgttcgtcgtctttatgctgcattgtttgtcttttttattttgttcatgtatttgttcggttcag 3028247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 3204676 - 3204608
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcat 347  Q
    |||||||||||||| ||| |||||| ||||||||||||||  ||  | || |||| |||||||||||||    
T  3204676 aatgactttggcgtggtcaacgttgcagatccgaagacatgagtattccgaagacatgaatatagtcat 3204608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 15237642 - 15237590
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctt 212  Q
    ||||||||  || |||||||| |||||||||||||| ||| ||||||||||||    
T  15237642 gtcttagtacgatgttggtttcttcgtcgtctttgtgcggtgttgtttgtctt 15237590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 318
Target Start/End: Complemental strand, 18197149 - 18196989
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctt-tttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    ||||||| ||||  || |||||| ||||||||||| |||  |||||||||||  | || | |||||| | ||||||| |||||  ||||| |||| | ||    
T  18197149 tcttagtttgacactgctttgtttgtcgtctttgttcggtattgtttgtcttcctcgtcttgttcaggtgtttgttcaattcaaattttcggatcggttt 18197050  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
     |||| |||| ||||||||  |||||||||| ||||||| |||||| ||||||| ||||||    
T  18197049 cgatctagtgcagatccaaccaatgactttgacgtcgtcaacgttgcagatccggagacat 18196989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 37719993 - 37720141
Alignment:
Q  203 tgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccac 299  Q
    ||||||||||| ||||||||||| | |||||||||| || ||  | ||||| || ||| ||||||||| ||||| ||  || ||||||||| || || ||    
T  37719993 tgtttgtctttcttgtttcgttcgggtatttgttcggtttagaatatcagaccaacttcgatccagtgcagatctaatcaaagactttggcttcatcaac 37720092  T
Q  300 gttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||| ||||||  |||||| |||  | || |||||||||||||||||||    
T  37720093 gttgcagatccagagacataggtattccgtagacttgaatatagtcata 37720141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 309
Target Start/End: Complemental strand, 23732415 - 23732245
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||| ||||||| || || ||||||||||| ||||||||||||| |||||| ||| ||    
T  23732415 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcatctttgtgcgtcgctgtttgtctttcttgtttcgttcaggtatttggtcggtt 23732316  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatc 309  Q
    ||| || ||| || ||||| ||||||||| ||||||||  ||||||||||||||||||||||||| |||||    
T  23732315 cagattgtcaaattagcttcgatccagtgcagatccaatcaatgactttggcgtcgtccacgttgcagatc 23732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 40775359 - 40775568
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  40775359 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggtt 40775458  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| |||| |||| ||||||||  ||||||||||||||| ||||||||| ||||||  ||||| ||||| || |||||| || |    
T  40775459 cagattgtcagatcagcttcgatctagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccagagaca-tggttattccggagatttaa 40775557  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  40775558 atatagtcata 40775568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 318
Target Start/End: Original strand, 9933944 - 9934114
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    |||||||||| | ||||||||| ||||||| ||||||||||||||||||   |||  |||||||||| ||||||||||||| |||||||| ||||||| |    
T  9933944 ttgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgt---gcgacgtttgtctttcttgtttcgttcaggtatttgtt-gattcagat 9934039  T
Q  246 tttcagatcagc-ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | |||||||||| ||||||||||| ||||| ||  ||||||||||| |||||| |||||| ||||||| ||||||    
T  9934040 tgtcagatcagctttgatccagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacat 9934114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 147 - 318
Target Start/End: Original strand, 28015454 - 28015628
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   |||||| || ||| ||| |||||||||||||||||| || ||||||||| |||| ||||||||||||| |||||||||| ||||| |    
T  28015454 ttgtgatttcgtcgtcttaatgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagat 28015553  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | | |||||||||| ||||||||| ||||| ||  ||||||||||| |||||| || ||| ||||||| ||||||    
T  28015554 tgttagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcgtcaacattgcagatccggagacat 28015628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 13008677 - 13008580
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcag 256  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||| ||||| || ||| |||||    
T  13008677 gtcttagtgcgacgttggtttgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgttcaggtatttgttcggttcagattgtcatatcag 13008580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 348
Target Start/End: Complemental strand, 26017680 - 26017471
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| || ||||||||||||||||||||||| || |||||||||||||| |||||||  |||| |||||| ||| ||    
T  26017680 ttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 26017581  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaa 338  Q
    ||| || ||| |||||||| ||||||||| ||||||||  ||||||||||||||| | ||||||| | || || |||||| | |  | |||||| || ||    
T  26017580 cagattgtcatatcagcttcgatccagtgcagatccaatcaatgactttggcgtcattcacgttgcaaattcggagacatggctattccggagatttaaa 26017481  T
Q  339 tatagtcata 348  Q
    ||||||||||    
T  26017480 tatagtcata 26017471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 7986003 - 7986163
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||| ||| |||||||  |||| |||||| ||  ||||| || ||| ||||||||    
T  7986003 tcttcgtgtgacgttggtttgttcgtcgtctttgtgtgacgttgtttgtttttcttgtttctctcaggtatttgatccgttcagattgtcaaatcagctt 7986102  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
     ||||||||| ||||||||  |||||||||| |||| ||||||||| ||||||||| ||||    
T  7986103 cgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccgaatacat 7986163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 348
Target Start/End: Original strand, 8319435 - 8319616
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc-ttgatccagt 267  Q
    |||||||||||||||||||||||||| |  | |||||||||||| |||||||  ||||  ||||| ||| ||||| || | |||||||| ||||||||||    
T  8319435 gacgttggtttgttcgtcgtctttgtgcaaccttgtttgtctttcttgtttctctcaggcatttgatcggttcagattgttagatcagctttgatccagt 8319534  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    | ||| ||||  ||||||||||||||| ||||||||| ||||||| ||||| ||||| || |||||| |||||||||| ||||    
T  8319535 gcagacccaatcaatgactttggcgtcatccacgttgcagatccggagaca-tggttgttccggagatttgaatatagccata 8319616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 11001936 - 11002144
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||||||||||||||| |  |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  11001936 ttattttgtgatttcgtcgtcttcgtgagacgttggtt-gttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcgctt 11002034  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| ||| ||||| ||||| ||  ||||||||||||||| | ||||||||||||||||| ||| ||||| || |||||| || |    
T  11002035 cagattgtcagatcagcttcgattcagtgcagatctaatcaatgactttggcgtcattcacgttgtagatccgaaaaca-tggttattccggagatttaa 11002133  T
Q  338 atatagtcata 348  Q
    |||||||||||    
T  11002134 atatagtcata 11002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 310
Target Start/End: Original strand, 772553 - 772706
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||||||| |||||  ||||||||||| ||   |||||||||||| ||||||||||||| |||||||||| ||||| || |||||||||||    
T  772553 gtcttagtgcgacgttgttttgtctgtcgtctttgtgcgatattgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagct 772652  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatcc 310  Q
    |  ||| |||| ||||||||  |||||||||||||||||| || ||| ||||||    
T  772653 tcaatctagtgcagatccaatcaatgactttggcgtcgtcaacattgaagatcc 772706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 277
Target Start/End: Original strand, 47749826 - 47749963
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||  |||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  47749826 ttattttgtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggtt 47749925  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa 277  Q
    ||| || ||||||||| || ||||||||| ||||||||    
T  47749926 cagattgtcagatcagtttcgatccagtgcagatccaa 47749963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 14707694 - 14707854
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||||||||| |||||||||||| ||||| ||||| ||||||||||||||||| ||||||| || || |||||||||||||||  || || ||||| |||    
T  14707694 tcttagtgtggcgttggtttgttagtcgtttttgtgcggcgttgtttgtctttcttgtttcatttaggtatttgttcgattcaaattgtctgatcatctt 14707793  T
Q  260 -gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
     |||||| || ||||||||  |||||||||  | ||||||| |||| ||||| ||||||||    
T  14707794 cgatccaatgcagatccaattaatgactttatcatcgtccatgttgcagatctgaagacat 14707854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 166 - 318
Target Start/End: Complemental strand, 10250481 - 10250326
Alignment:
Q  166 gtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct-ttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatc 263  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||| |||| ||||||||||  ||||||||  ||||| || ||||| |||||| ||||    
T  10250481 gtgtgacgttgttttgttcgtcgtctttgtgtggcgttgtttgtcttttttatttcgttcaggaatttgttccgttcagattgtcagaacagcttcgatc 10250382  T
Q  264 cagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
     |||| ||||| ||  ||||||||||| ||| || | || ||||||||||||||||    
T  10250381 gagtgcagatcaaatcaatgactttggagtcatcaatgtagtagatccgaagacat 10250326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 318
Target Start/End: Complemental strand, 135162 - 134988
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttg-tctttttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||| ||| |||||||||||||||||||| ||||| || ||||||||| | || |||||||  | || |||||| ||| ||||| |    
T  135162 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtttttgtgcgacgttgtttgattttcttgtttctcttaggtatttgatcggttcagat 135063  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | ||| |||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||| | ||||||    
T  135062 tgtcaaatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctggagacat 134988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 317
Target Start/End: Original strand, 42490795 - 42490973
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||||  ||||| ||||||||||||||||||||| | |||||| || | |||||||| ||| |||||||  |||| |||||| ||| ||    
T  42490795 ttattttgtgatttcatcgtcttcgtgtgacgttggtttgttcgttgcctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggtt 42490894  T
Q  241 caggttttcagatcagctt-gatccagtgtagatcca-aaaatgactttggcgtcgtccacgttgtagatccgaagaca 317  Q
    |||  | |||||||||||| |||| |||| |||||||   ||||||| ||||||| ||||||||| ||||||| |||||    
T  42490895 cagactgtcagatcagcttcgatctagtgcagatccagtcaatgactgtggcgtcatccacgttgcagatccggagaca 42490973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 303
Target Start/End: Original strand, 24470514 - 24470649
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||||| || |||||||||||| ||||||||    
T  24470514 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagt 24470612  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttg 303  Q
    | |||| |||  ||||||||||||||| |||||||||    
T  24470613 gcagattcaatcaatgactttggcgtcatccacgttg 24470649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 303
Target Start/End: Original strand, 24475462 - 24475597
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||| ||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||||| || |||||||||||| ||||||||    
T  24475462 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagt 24475560  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttg 303  Q
    | |||| |||  ||||||||||||||| |||||||||    
T  24475561 gcagattcaatcaatgactttggcgtcatccacgttg 24475597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 311
Target Start/End: Complemental strand, 43807172 - 43807000
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| || ||||||||||||||| ||||||| || |||||||||||||| |||||||  |||| | |||| ||| ||    
T  43807172 ttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcatctttgtgcgacgttgtttgtctttcttgtttctctcaggtgtttgatcggtt 43807073  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||| || | |||||||||| |||| |||| ||||||||  ||||||||||||| | ||||||||| |||||||    
T  43807072 cagattgtaagatcagcttcgatctagtgcagatccaatcaatgactttggcggcatccacgttgcagatccg 43807000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 22751559 - 22751666
Alignment:
Q  171 acgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtg 268  Q
    ||||||||||||||||||||||| | |||||||||||| |||| ||||||||||||  |||||||||  ||||| || |||||||||||| |||||| ||    
T  22751559 acgttggtttgttcgtcgtctttatgcggcgttgtttgcctttcttgtttcgttcaactatttgttcagttcagattgtcagatcagcttcgatccaatg 22751658  T
Q  269 tagatcca 276  Q
     |||||||    
T  22751659 cagatcca 22751666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 30992827 - 30992636
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| ||||||| |||||||||||||||||| || |||||||||||||| ||| |||  |||| |||||| ||| ||||| || |||||||| ||    
T  30992827 gtcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacgttgtttgtctttcttggttctctcaggtatttgatcggttcagattgtcagatcaact 30992728  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | |||| |||| ||||||||  |||||||||| | || ||||||||| ||||||| || ||| | |  | |||||| || ||||||||||||    
T  30992727 tcgatctagtgcagatccaatcaatgactttgacatcatccacgttgcagatccggaggcatggctattccggagatttaaatatagtcata 30992636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 40476836 - 40476971
Alignment:
Q  179 ttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatcca 276  Q
    ||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||  ||||| || |||||||||||| |||| |||| |||||||    
T  40476836 ttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagattgtcagatcagcttcgatcaagtgcagatcca 40476935  T
Q  277 aa-aatgactttggcgtcgtccacgttgtagatccg 311  Q
    |  |||||||||| |||| |||||||||||||||||    
T  40476936 atcaatgactttgacgtcatccacgttgtagatccg 40476971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 147 - 346
Target Start/End: Complemental strand, 5025073 - 5024871
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggt 245  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || ||||||||  |||| || |||| || || |||||||||| ||||| |    
T  5025073 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgttttcctttcttatttcatttaggtatttgttcggttcagat 5024974  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | ||||||||| || ||||||||  ||||| ||  ||||||||||| |||||| | |||| ||||||| |||||| |||  |  |||||||| |||||||    
T  5024973 tgtcagatcagattcgatccagtccagatcaaatcaatgactttggagtcgtcaatgttgcagatccggagacataggtattctggagacttaaatatag 5024874  T
Q  344 tca 346  Q
    |||    
T  5024873 tca 5024871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 23177600 - 23177511
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgtt 235  Q
    |||||||||| | ||||||||| ||| ||||||| |||||||||||||| ||||||||| ||||||| |||||| |||||| ||||||||    
T  23177600 ttgtgatttctccgtcttagtgcgaccttggttttttcgtcgtctttgtgcggcgttgtctgtctttcttgttttgttcaggtatttgtt 23177511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 311
Target Start/End: Complemental strand, 8611645 - 8611474
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||| ||| ||||||||||| || |||||||||| ||| |||||||  |||| | |||| ||| ||    
T  8611645 ttattttgtgatttcgtcgtcttcgtgcgacgttggtt-gttagtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgctt 8611547  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccg 311  Q
    ||| || ||| |||||||| ||||||||| ||||||||  ||| ||||||||||| ||||||||| |||||||    
T  8611546 cagattgtcatatcagcttcgatccagtgcagatccaatcaataactttggcgtcatccacgttgcagatccg 8611474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 49167036 - 49167226
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| |||||||||| ||||||||||||||| || |||||||||| ||| |||||||   ||| |||||| ||| ||||| || | |||||||||    
T  49167036 gtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcccaggtatttgatcgcttcagattgttagatcagct 49167134  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttgaatatagtcata 348  Q
    | ||||||||| ||||| ||  ||||||||| ||||| ||||||||| ||||||| | ||| ||||| || |||||| || ||||||||||||    
T  49167135 tcgatccagtgcagatctaatcaatgactttagcgtcatccacgttgcagatccggaaaca-tggttattccggagatttaaatatagtcata 49167226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 44681570 - 44681689
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    |||| ||||||||||||||||||||||||| |||||  | |||||||||||||| |||||||||| |||||||| ||   ||||| || ||| | |||||    
T  44681570 gtctcagtgtgacgttggtttgttcgtcgtttttgtgggacgttgtttgtctttcttgtttcgtttagatatttattatgttcagattgtcaaaccagct 44681669  T
Q  259 t-gatccagtgtagatccaa 277  Q
    | ||||| ||||||||||||    
T  44681670 tcgatccggtgtagatccaa 44681689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 348
Target Start/End: Complemental strand, 33530426 - 33530288
Alignment:
Q  212 ttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatc 309  Q
    |||||||| |||||  |||||||||| ||||| || ||| |||||||| ||||||||| | ||||||  ||||| ||||||||| || |||||| |||||    
T  33530426 ttttgttttgttcatgtatttgttcggttcagattgtcaaatcagcttagatccagtgcaaatccaatcaatgaatttggcgtcatcaacgttgcagatc 33530327  T
Q  310 cgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |  ||||||  ||  ||||||||||||||||||||||||    
T  33530326 ctgagacatgagtatttcggagacttgaatatagtcata 33530288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 43483697 - 43483763
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    |||||||||| | ||||||||| ||||||| |||||||||||||||||| || ||||||||||||||    
T  43483697 ttgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtcttt 43483763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 3266624 - 3266693
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||| |||||| |||||||||||||| ||||||  || |||||||||||| ||||||||||||    
T  3266624 aatgactttggtgtcgtcaacgttgtagatccggagacatgagtacttcggagacttaaatatagtcata 3266693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 34893220 - 34893378
Alignment:
Q  159 tgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc 257  Q
    |||||||||| | ||||| ||||||||||||||||||||    |||||||||||| |||||||||  || ||||||||  |||||| || ||||||||||    
T  34893220 tgtcttagtgcgtcgttgttttgttcgtcgtctttgtacaatcttgtttgtctttcttgtttcgt--aggtatttgtttcattcagtttgtcagatcagc 34893317  T
Q  258 -ttgatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagac 316  Q
     ||||||||||| ||||| ||  ||||||||||| ||| || |||||| | ||||| ||||    
T  34893318 tttgatccagtgcagatcaaattaatgactttggagtcctcaacgttgcaaatccggagac 34893378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 36253168 - 36253237
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||||||||||| |||||| ||   ||||||||| ||||||||||||||    
T  36253168 aatgactttggcgtcgtcaacgttgtagatccggagacatgggaatttcggagacatgaatatagtcata 36253237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 348
Target Start/End: Original strand, 46918524 - 46918700
Alignment:
Q  174 ttggtttgttcgtcgtctttgtacggcgttgtttgtc-tttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtag 271  Q
    |||||||||| ||||||||||| ||| |||||||||| || |||||||||||||  ||||||||| ||||| || |||||||||||| |||||| || |     
T  46918524 ttggtttgtttgtcgtctttgtgcggtgttgtttgtcattcttgtttcgttcag-gatttgttcggttcagattgtcagatcagcttagatccaatgcaa 46918622  T
Q  272 atccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    || |||  ||||||||| | || || || |||| ||||||  ||||||  ||  || |||||||||||||||||||||    
T  46918623 attcaatcaatgactttagtgttgtgcatgttgcagatccagagacatgagtattttggagacttgaatatagtcata 46918700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 348
Target Start/End: Complemental strand, 38649361 - 38649171
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||||||| ||| ||| |||||| ||||||||||| || ||||||||| |||| || |||||||||  ||||||||||| |||| || | |||||||||    
T  38649361 gtcttagtgagaccttgttttgtttgtcgtctttgtgcgacgttgtttgcctttcttttttcgttcaagtatttgttcga-tcagattgttagatcagct 38649263  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatc-cgaagacattggttcttcggagacttgaatatagtcata 348  Q
    | |||||| || | ||| ||  ||||||||||| |||||| || |||||||||  |||||||| |||  | ||||||||| ||||||||||||    
T  38649262 tcgatcca-tgcatatcaaatcaatgactttggagtcgtcaacattgtagatctggaagacatgggtattccggagacttaaatatagtcata 38649171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 39090220 - 39090308
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtg 268  Q
    |||||| ||||||| || |||||||||||||| ||||||||||||| |||||||||| ||||| || ||| |||||||| |||||||||    
T  39090220 ttcgtcatctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcatatcagcttcgatccagtg 39090308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 36350300 - 36350439
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttttt-gtttcgttcagatatttgttcgattcaggttttcagatcagc-ttgatccagtgtagatccaa-a 278  Q
    ||||||||||| ||  | |||||||||||||||| |||| |||||||||||||||||| | || || ||| |||||| ||||| |||||  |||||||      
T  36350300 ttcgtcgtcttagtgtgacgttgtttgtcttttttgtttggttcagatatttgttcgacttagattgtcatatcagctttgattcagtgcggatccaatc 36350399  T
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    |||| ||||||||||||| |||||| |||| || ||||||    
T  36350400 aatggctttggcgtcgtcaacgttgcagattcggagacat 36350439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 41288194 - 41288263
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||||||||||| | ||||  ||  ||||||||||| ||||||||||||    
T  41288194 aatgactttggcgtcgtcaacgttgtagatccggatacatgagtatttcggagacttaaatatagtcata 41288263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 14734066 - 14733971
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcag 243  Q
    ||||||||||   ||||||||| ||||||| |||||| ||||||||||| || |||||||||||||||   || |||||| | ||||||||||||||    
T  14734066 ttgtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcttttccctt-gttcaggtgtttgttcgattcag 14733971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 318
Target Start/End: Complemental strand, 19895647 - 19895527
Alignment:
Q  201 gttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtcc 297  Q
    ||||||||| ||| |||||||  |||| |||||| ||| ||||| || ||| |||||||| ||||||||| |||| |||  ||||||||||||||| |||    
T  19895647 gttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatcc 19895548  T
Q  298 acgttgtagatccgaagacat 318  Q
    ||||||||||| || ||||||    
T  19895547 acgttgtagattcggagacat 19895527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 311
Target Start/End: Complemental strand, 21329299 - 21329148
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggttttcagatcagctt- 259  Q
    ||||||||||||  || |||||| |||| |||||| ||  ||||||||||||||  ||| |||||| | ||||||| |||||| || |||||||| |||     
T  21329299 tcttagtgtgaccctgttttgtttgtcgactttgtgcgatgttgtttgtcttttccttt-gttcaggtgtttgttcaattcagattgtcagatcaacttc 21329201  T
Q  260 gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    |||| |||| ||||||||  ||||||||||||||  || |||||| |||||||    
T  21329200 gatctagtgcagatccaaccaatgactttggcgttatcaacgttgcagatccg 21329148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 29804692 - 29804529
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattcaggtt 246  Q
    ||||||||||   ||| ||||| |||| || |||||| ||||||||||| || ||||||||   ||||| | | |||||| | |||||||||||||| ||    
T  29804692 ttgtgatttcgtcgtcatagtgcgacgctgttttgtttgtcgtctttgtgcgacgttgttt---tttttttcttgttcaggtgtttgttcgattcagatt 29804596  T
Q  247 ttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
     |||||||||||| |||||  || ||||||||  |||||||||||| || || |||||| |||||||    
T  29804595 atcagatcagcttcgatccgatgcagatccaaccaatgactttggcatcatcaacgttgcagatccg 29804529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 302
Target Start/End: Original strand, 37399730 - 37399853
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaa-a 278  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||  |||||| | ||||||  || || ||| ||||| ||||||||| ||||||||      
T  37399730 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctttcaagtatttgattgattcaaattgtccgattagcttcgatccagtgcagatccaatc 37399829  T
Q  279 aatgactttggcgtcgtccacgtt 302  Q
    |||||||||| |||| ||||||||    
T  37399830 aatgactttgacgtcatccacgtt 37399853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 32643206 - 32643275
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||||||||||||| ||||||| ||||||  |   | |||||||||||||||| |||||    
T  32643206 aatgactttggcgtcgtccacgttgcagatccggagacatgaggattccggagacttgaatataatcata 32643275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 36579224 - 36579155
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| | |||| ||||||| ||||||| ||  | ||||||| ||||||||||||||    
T  36579224 aatgactttggcgtcgtcaatgttgcagatccggagacattagtattccggagacatgaatatagtcata 36579155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 303
Target Start/End: Complemental strand, 37890455 - 37890347
Alignment:
Q  198 ggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagc-ttgatccagtgtagatcca-aaaatgactttggcgtcg 294  Q
    |||||||||||| ||| ||||||||||||  |||||||||| ||||| || |||||||||| |||||||  || |||||||   |||||| || ||||||    
T  37890455 ggcgttgtttgtttttcttgtttcgttcacgtatttgttcgtttcagattgtcagatcagctttgatccgctgcagatccagtcaatgacattagcgtcg 37890356  T
Q  295 tccacgttg 303  Q
    |||||||||    
T  37890355 tccacgttg 37890347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 9137190 - 9137257
Alignment:
Q  281 tgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||| |||||| ||||||| ||||||  ||  | ||||||||||||| ||||||||    
T  9137190 tgactttggcgtcgtcaacgttgcagatccggagacataagtattccggagacttgaatttagtcata 9137257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 24045282 - 24045188
Alignment:
Q  163 ttagtgtgacgttg-gtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatca 255  Q
    |||||| ||||||| |||||||||||||||||||  ||| |||||||| ||| |||||| | |||  |||||| ||||||||| || ||||||||    
T  24045282 ttagtgcgacgttgtgtttgttcgtcgtctttgtgtggcattgtttgtatttcttgttttgctcatgtatttgatcgattcagattgtcagatca 24045188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 35135184 - 35135135
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt 213  Q
    |||||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  35135184 ttagtgtgacgttggtttgttc-tcgtctttgtgtggcgttgtctgtcttt 35135135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 316
Target Start/End: Original strand, 6667633 - 6667670
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagac 316  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  6667633 aatgactttggcgtcgtcaacgttgcagatccgaagac 6667670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 17509087 - 17509018
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||| | ||||||| ||||||  ||  | ||||||| ||||||||||||||    
T  17509087 aatgactttggcgtcgtcaacgtcgcagatccggagacatgagtattccggagacatgaatatagtcata 17509018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 17544127 - 17544196
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||| | ||||||| ||||||  ||  | ||||||| ||||||||||||||    
T  17544127 aatgactttggcgtcgtcaacgtcgcagatccggagacatgagtattccggagacatgaatatagtcata 17544196  T

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Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 21954707 - 21954638
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| || |||  ||  | |||| |||||||||||||||||    
T  21954707 aatgactttggcgtcgtcaacgttgcagatccggagtcatgagtattccggacacttgaatatagtcata 21954638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 35362989 - 35362920
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||  |||||| |||||| |||| ||||||||| | |  |||||||||||||||||| |||||    
T  35362989 aatgactttgatgtcgtcaacgttgcagattcgaagacatggatatttcggagacttgaatataatcata 35362920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 36719435 - 36719366
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||||||| || |||||  ||||||| ||||||  ||  ||||||||| ||||||||||||||    
T  36719435 aatgactttggcgtcatcaacgttccagatccggagacatgagtatttcggagacatgaatatagtcata 36719366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 38277076 - 38277145
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| |||| |  || ||| |||  | ||||||||||||||||||||||    
T  38277076 aatgactttggcgtcgtcaacgttgcagatacagagtcatgggtgttccggagacttgaatatagtcata 38277145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 45482302 - 45482371
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||  ||| |||||| ||||||| ||||||  ||  | ||||||||||||||||||||||    
T  45482302 aatgactttggcgctgtcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcata 45482371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 348
Target Start/End: Complemental strand, 21552388 - 21552268
Alignment:
Q  230 tttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttc 327  Q
    |||| ||| ||||| || ||||||| |||| |||||| || ||||||||  ||||||||||||||| || |||||| |||||||||| |||   |  |||    
T  21552388 tttgatcggttcagattgtcagatccgcttcgatccactgcagatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatgactatttc 21552289  T
Q  328 ggagacttgaatatagtcata 348  Q
    ||||| || ||||||||||||    
T  21552288 ggagattttaatatagtcata 21552268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 346
Target Start/End: Complemental strand, 12225 - 12018
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||  |||| |||||| ||| ||    
T  12225 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggtt 12126  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttctt-cggagacttga 337  Q
    ||| || |||||||||||| |||  |||| ||||||||  ||||||||||||||| ||||||||| ||||||| ||||| ||||| || |||||| || |    
T  12125 cagattgtcagatcagcttcgatttagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagaca-tggttattccggagatttaa 12027  T
Q  338 atatagtca 346  Q
    |||||||||    
T  12026 atatagtca 12018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 308
Target Start/End: Original strand, 244746 - 244897
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagct 258  Q
    ||||| ||| ||| |||||||||||||||||||||| || |||||||||| ||| |||||||  |||| ||||||  || ||||| || |||||||||||    
T  244746 gtcttcgtgcgaccttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgaccggttcagattgtcagatcagct 244845  T
Q  259 t-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagat 308  Q
    | ||||||||| ||||||||  ||||||||||||||| ||||||||||||||    
T  244846 tcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgtagat 244897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 161 - 320
Target Start/End: Complemental strand, 1130 - 968
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt 259  Q
    |||| ||||||||||||||||||||| |||||| | ||   |||||||| ||| |||||||  |||| |||||| ||| ||||| || ||||||||||||    
T  1130 tcttcgtgtgacgttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctt 1031  T
Q  260 -gatccagtgtagatccaaa-aatgactttggcgtcgtccacgttgtagatccgaagacattg 320  Q
     ||||||||| ||||||||  ||||||||||||||| ||||||||| ||||| ||||||||||    
T  1030 cgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctgaagacattg 968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 36621 - 36788
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtctttttgtttcgttcagatatttgttcgattc 241  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||| ||    ||||||||||  |||| |||||| ||  |||    
T  36621 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttttt----tttttgtttctctcaggtatttgatcagttc 36716  T
Q  242 aggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccg 311  Q
    || || |||||||||||| ||||||||| ||||||||  ||||||||||||||| ||||||||| |||||||    
T  36717 agattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccg 36788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 1163 - 984
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| ||||||||||   ||||||||| |||||||||||||||||||| ||||| ||  |||| |||||||| |||| |||||||| |||||||| | ||    
T  1163 ttattttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggtt 1064  T
Q  241 caggttttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    ||  || |||||||| ||| |||| |||| ||||||||  |||||| || |||||||||| |||| ||||||| ||||||    
T  1063 caaattgtcagatcaacttcgatctagtgcagatccaatcaatgacattagcgtcgtccatgttgcagatccggagacat 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 91385 - 91257
Alignment:
Q  182 ttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagtgtagatccaaaa 279  Q
    ||||||||||||||||| |||||| ||||||| || ||| |||  |||||||||||| ||||  || ||| ||||| || ||||||||||||||| ||      
T  91385 ttcgtcgtctttgtacgacgttgtatgtctttctttttttgttatgatatttgttcggttcaaattgtcaaatcagttttgatccagtgtagatcaaatc 91286  T
Q  280 atgactttggcgtcgtccacgttgtagat 308  Q
    ||||||||||||| |||||||||| ||||    
T  91285 atgactttggcgttgtccacgttgcagat 91257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 318
Target Start/End: Original strand, 11134 - 11285
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgattcaggttttcagatcagctt-gatccagt 267  Q
    |||||||||||||||| ||||||| | || |||||||||| ||| |||||||  |||| |||||| |||||| || || ||| |||||||| |||| |||    
T  11134 gacgttggtttgttcgccgtctttatgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgatttagattgtcaaatcagcttggatctagt 11233  T
Q  268 gtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacat 318  Q
    | | ||||||  |||||||||| |||| ||||||||| ||||||| ||||||    
T  11234 gcatatccaatcaatgactttgacgtcatccacgttgcagatccggagacat 11285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 10333 - 10239
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgtt 235  Q
    |||| |||||||||   |||||||||| |||||||||||||||||||||||||| |   ||||||||||||| |||||||||  || ||||||||    
T  10333 ttattttgtgatttggttgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcgtctaggtatttgtt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 6807 - 6695
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcttt-ttgtttcgttcagatatttgttcgatt 240  Q
    |||| |||||||||   ||||||||||  ||||||||||||||||||||  ||| ||||||| ||||||||| |||||||||||||  ||||| ||| ||    
T  6807 ttattttgtgattttgttgtcttagtgcaacgttggtttgttcgtcgtc--tgtgcggcgttatttgtctttcttgtttcgttcaggcatttgatcggtt 6710  T
Q  241 caggttttcagatca 255  Q
     || || ||||||||    
T  6709 tagattgtcagatca 6695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 11793 - 11589
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtct---ttttgtttcgttcagatatttgttcgattcaggt 245  Q
    |||||||||  ||||||||| || |||| ||||   |||| |||||| || |||| |||||||   |||| |||||||||  ||||||||| |||||| |    
T  11793 gtgatttcatcgtcttagtgcgaagttgttttgcctgtcgactttgtgcgacgttatttgtcttttttttttttcgttcatgtatttgttcaattcagat 11694  T
Q  246 tttcagatcagctt-gatccagtgtagatccaa-aaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatag 343  Q
    | ||| |||||||| ||||||||| ||||| ||  ||||| ||||| |||||| |||||| ||||||  | |||| |||  |  |||||||| |||||||    
T  11693 tgtcaaatcagcttcgatccagtgcagatcaaatcaatgattttggagtcgtcaacgttgcagatccagaaacatgggtattctggagacttaaatatag 11594  T
Q  344 tcata 348  Q
    |||||    
T  11593 tcata 11589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 3138 - 3207
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    ||||||||||| |||||| |||||| | ||||| ||||||  || |||| ||||||| ||||||||||||    
T  3138 aatgactttggtgtcgtcaacgttgcaaatccggagacatgagtacttcagagacttaaatatagtcata 3207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 2325 - 2256
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| | |||| ||||||| ||||||  ||  |  |||||||||||||||||||||    
T  2325 aatgactttggcgtcgtcaatgttgcagatccggagacatgagtattctggagacttgaatatagtcata 2256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 35322 - 35391
Alignment:
Q  279 aatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcggagacttgaatatagtcata 348  Q
    |||||||||||||||||| |||||| ||||||| | ||||  ||  | ||||||||||||||| ||||||    
T  35322 aatgactttggcgtcgtcaacgttgcagatccggatacatgagtattccggagacttgaatattgtcata 35391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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