View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1809R-Insertion-1 (Length: 950)

Name: NF1809R-Insertion-1
Description: NF1809R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1809R-Insertion-1
NF1809R-Insertion-1
[»] scaffold0166 (6 HSPs)
scaffold0166 (609-949)||(19562-19900)
scaffold0166 (13-324)||(20214-20524)
scaffold0166 (13-107)||(33924-34010)
scaffold0166 (197-272)||(34056-34131)
scaffold0166 (308-368)||(20135-20195)
scaffold0166 (401-464)||(19906-19971)
[»] chr5 (8 HSPs)
chr5 (609-949)||(24777179-24777517)
chr5 (13-324)||(24777831-24778141)
chr5 (197-272)||(24650601-24650676)
chr5 (13-107)||(24791541-24791627)
chr5 (197-272)||(24791673-24791748)
chr5 (308-368)||(24777752-24777812)
chr5 (401-464)||(24777523-24777588)
chr5 (444-500)||(39007059-39007115)
[»] chr4 (5 HSPs)
chr4 (401-500)||(31862467-31862568)
chr4 (427-488)||(24786337-24786398)
chr4 (427-488)||(24821866-24821927)
chr4 (522-555)||(28792308-28792341)
chr4 (584-627)||(16600825-16600868)
[»] chr8 (2 HSPs)
chr8 (401-501)||(15552941-15553043)
chr8 (585-628)||(24315189-24315232)
[»] chr1 (4 HSPs)
chr1 (590-674)||(10430785-10430867)
chr1 (403-500)||(47220689-47220788)
chr1 (427-473)||(14258160-14258206)
chr1 (680-730)||(30730040-30730090)
[»] chr6 (1 HSPs)
chr6 (590-624)||(7653134-7653168)
[»] chr3 (1 HSPs)
chr3 (450-500)||(29247268-29247318)


Alignment Details
Target: scaffold0166 (Bit Score: 317; Significance: 1e-178; HSPs: 6)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 609 - 949
Target Start/End: Complemental strand, 19900 - 19562
Alignment:
Q  609 acctagcatgagcgcagcccctaagatttcaaaatttattctcaaattgctttgttccaattgattcattactccactcacatattcatcacatgttctt 708  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19900 acctagcatgagcgcagcccctaagatttcaaaatttattctcaaattgctttgttccaattgattcattactctactcacatattcatcacatgttctt 19801  T
Q  709 tcaatttcattgtgagtgctagagccattacttgtttcaatttcaacgaaacaacatcttggtgaattgttacgtgaattgaagagtggtttaatttctg 808  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19800 tcaatttcattgtgagtgctagagccattacttgtttcaatttcaacgaaacaacatcttggtgaattgttacgtgaattgaagagtggtttaatttctg 19701  T
Q  809 cgatctccttttcttcttccatcccaacagacttcacttctagttcatatttaacctagccacggccatgccgtttgattggcatgccgagttggctttc 908  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19700 cgatctccttttcttcttccatcccaacagacttcacttctagttcatatttaacctagccacggccatgccgtttgattggcatgccgagttgg-tttc 19602  T
Q  909 cactgcacgctcctttgcctagggttctgaccgatactgtt 949  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  19601 cactgcaccctcctttgccta-ggttctgaccgatactgtt 19562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 13 - 324
Target Start/End: Complemental strand, 20524 - 20214
Alignment:
Q  13 gtgttttcattatctccctagaattgttgaagttgtcttatgccatgatacaatctggggtgaattggaaacatgggtttgagaattgctctatttacca 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20524 gtgttttcattctctccctagaattgttgaagttgtcttatgccatgatacaatctggggtgaattggaaacatgggtttgagaattgctctatttatca 20425  T
Q  113 tagggtaatgtcatgatttttatcttctcctagtattattgtaaattgtactgttcttgtagtatttaagtgaaatcttttagctgtttgttaatagtac 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  20424 tagggtaatgtcatgatttttatcttctcctagtattattgtaaattgtactgttcttgtagtatttatgtgaaatctttgagctgtttgttaatagtac 20325  T
Q  213 agttatggtttgtgtgttttcgtgttaatattcagttttgctatgacttatgaataaggtaatgggactaactcggttgattgttagtagcacaagttga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20324 agttatggtttgtgtgttttcgtgttaatattcagttttgctatgac-tatgaataaggtaatgggactaactcggttgattgttagtagcacaagttga 20226  T
Q  313 caatttttcttt 324  Q
    ||||||||||||    
T  20225 caatttttcttt 20214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 33924 - 34010
Alignment:
Q  13 gtgttttcattatctccctagaattgttgaagttgtcttatgccatgatacaatctggggtgaattggaaacatgggtttgagaattgctctatt 107  Q
    ||||||||||| |||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33924 gtgttttcattctctccctagaattgttgaggttg--------catgatacaatctggggtgaattggaaacatgggtttaagaattgctctatt 34010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 197 - 272
Target Start/End: Original strand, 34056 - 34131
Alignment:
Q  197 tgtttgttaatagtacagttatggtttgtgtgttttcgtgttaatattcagttttgctatgacttatgaataaggt 272  Q
    |||||||||||||||| |||| | |||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  34056 tgtttgttaatagtactgttaagatttgcgtgttttcgtgttaatattcagttttgctttgacttgtgaataaggt 34131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 20195 - 20135
Alignment:
Q  308 gttgacaatttttcttttgtactaaatccagagaatattggttttttctagattacccatc 368  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||    
T  20195 gttgacaatttttcttttgtactaaatctagagaatattggttttctttagattacccatc 20135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 401 - 464
Target Start/End: Complemental strand, 19971 - 19906
Alignment:
Q  401 gacacttttttgactt--gaagccttggttatacaattttcaatacaaaagtttctacatttgctt 464  Q
    |||||| |||||||||  ||| ||||||||| |||||||||||| |||||| ||||||||||||||    
T  19971 gacactcttttgacttttgaaaccttggttacacaattttcaatgcaaaagcttctacatttgctt 19906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 317; Significance: 1e-178; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 609 - 949
Target Start/End: Complemental strand, 24777517 - 24777179
Alignment:
Q  609 acctagcatgagcgcagcccctaagatttcaaaatttattctcaaattgctttgttccaattgattcattactccactcacatattcatcacatgttctt 708  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24777517 acctagcatgagcgcagcccctaagatttcaaaatttattctcaaattgctttgttccaattgattcattactctactcacatattcatcacatgttctt 24777418  T
Q  709 tcaatttcattgtgagtgctagagccattacttgtttcaatttcaacgaaacaacatcttggtgaattgttacgtgaattgaagagtggtttaatttctg 808  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24777417 tcaatttcattgtgagtgctagagccattacttgtttcaatttcaacgaaacaacatcttggtgaattgttacgtgaattgaagagtggtttaatttctg 24777318  T
Q  809 cgatctccttttcttcttccatcccaacagacttcacttctagttcatatttaacctagccacggccatgccgtttgattggcatgccgagttggctttc 908  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24777317 cgatctccttttcttcttccatcccaacagacttcacttctagttcatatttaacctagccacggccatgccgtttgattggcatgccgagttgg-tttc 24777219  T
Q  909 cactgcacgctcctttgcctagggttctgaccgatactgtt 949  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  24777218 cactgcaccctcctttgccta-ggttctgaccgatactgtt 24777179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 13 - 324
Target Start/End: Complemental strand, 24778141 - 24777831
Alignment:
Q  13 gtgttttcattatctccctagaattgttgaagttgtcttatgccatgatacaatctggggtgaattggaaacatgggtttgagaattgctctatttacca 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24778141 gtgttttcattctctccctagaattgttgaagttgtcttatgccatgatacaatctggggtgaattggaaacatgggtttgagaattgctctatttatca 24778042  T
Q  113 tagggtaatgtcatgatttttatcttctcctagtattattgtaaattgtactgttcttgtagtatttaagtgaaatcttttagctgtttgttaatagtac 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  24778041 tagggtaatgtcatgatttttatcttctcctagtattattgtaaattgtactgttcttgtagtatttatgtgaaatctttgagctgtttgttaatagtac 24777942  T
Q  213 agttatggtttgtgtgttttcgtgttaatattcagttttgctatgacttatgaataaggtaatgggactaactcggttgattgttagtagcacaagttga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24777941 agttatggtttgtgtgttttcgtgttaatattcagttttgctatgac-tatgaataaggtaatgggactaactcggttgattgttagtagcacaagttga 24777843  T
Q  313 caatttttcttt 324  Q
    ||||||||||||    
T  24777842 caatttttcttt 24777831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 197 - 272
Target Start/End: Original strand, 24650601 - 24650676
Alignment:
Q  197 tgtttgttaatagtacagttatggtttgtgtgttttcgtgttaatattcagttttgctatgacttatgaataaggt 272  Q
    |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  24650601 tgtttgttaatagtactgttaagatttgtgtgttttcgtgttaatattcagttttgctttgacttgtgaataaggt 24650676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 24791541 - 24791627
Alignment:
Q  13 gtgttttcattatctccctagaattgttgaagttgtcttatgccatgatacaatctggggtgaattggaaacatgggtttgagaattgctctatt 107  Q
    ||||||||||| |||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24791541 gtgttttcattctctccctagaattgttgaggttg--------catgatacaatctggggtgaattggaaacatgggtttaagaattgctctatt 24791627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 197 - 272
Target Start/End: Original strand, 24791673 - 24791748
Alignment:
Q  197 tgtttgttaatagtacagttatggtttgtgtgttttcgtgttaatattcagttttgctatgacttatgaataaggt 272  Q
    |||||||||||||||| |||| | |||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  24791673 tgtttgttaatagtactgttaagatttgcgtgttttcgtgttaatattcagttttgctttgacttgtgaataaggt 24791748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 24777812 - 24777752
Alignment:
Q  308 gttgacaatttttcttttgtactaaatccagagaatattggttttttctagattacccatc 368  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||    
T  24777812 gttgacaatttttcttttgtactaaatctagagaatattggttttctttagattacccatc 24777752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 401 - 464
Target Start/End: Complemental strand, 24777588 - 24777523
Alignment:
Q  401 gacacttttttgactt--gaagccttggttatacaattttcaatacaaaagtttctacatttgctt 464  Q
    |||||| |||||||||  ||| ||||||||| |||||||||||| |||||| ||||||||||||||    
T  24777588 gacactcttttgacttttgaaaccttggttacacaattttcaatgcaaaagcttctacatttgctt 24777523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 39007059 - 39007115
Alignment:
Q  444 caaaagtttctacatttgcttctttaaccattgtcccgggagcatcggttaacattt 500  Q
    ||||||||||||||||||||||||||| || || ||||| |||| || |||||||||    
T  39007059 caaaagtttctacatttgcttctttaatcagtgccccggaagcaccgattaacattt 39007115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 2e-24; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 401 - 500
Target Start/End: Complemental strand, 31862568 - 31862467
Alignment:
Q  401 gacacttttttgact--tgaagccttggttatacaattttcaatacaaaagtttctacatttgcttctttaaccattgtcccgggagcatcggttaacat 498  Q
    |||||||||||||||  |||||| ||| ||| |||||||||||| |||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||    
T  31862568 gacacttttttgactcttgaagcattgattagacaattttcaatgcaaaagtttctatatttgcttccttaaccagtgttccgggagcatcggttaacat 31862469  T
Q  499 tt 500  Q
    ||    
T  31862468 tt 31862467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 488
Target Start/End: Original strand, 24786337 - 24786398
Alignment:
Q  427 ttatacaattttcaatacaaaagtttctacatttgcttctttaaccattgtcccgggagcat 488  Q
    ||||||||||| ||||||||||||| ||| ||||||||| ||||||| || ||| |||||||    
T  24786337 ttatacaatttccaatacaaaagttactatatttgcttccttaaccagtgccccaggagcat 24786398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 488
Target Start/End: Complemental strand, 24821927 - 24821866
Alignment:
Q  427 ttatacaattttcaatacaaaagtttctacatttgcttctttaaccattgtcccgggagcat 488  Q
    ||||||||||| ||||||||||||| ||| ||||||||| ||||||| || ||| |||||||    
T  24821927 ttatacaatttccaatacaaaagttactatatttgcttccttaaccagtgccccaggagcat 24821866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 555
Target Start/End: Complemental strand, 28792341 - 28792308
Alignment:
Q  522 aaaagtatttttaaaatttatatgaggctttttt 555  Q
    ||||||||||||||||||||||||||||||||||    
T  28792341 aaaagtatttttaaaatttatatgaggctttttt 28792308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 627
Target Start/End: Complemental strand, 16600868 - 16600825
Alignment:
Q  584 catgattcgctctgctagggtttgcacctagcatgagcgcagcc 627  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||    
T  16600868 catgaatcgctctgttagggtttgcacctagcaagagcgcagcc 16600825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 3e-20; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 401 - 501
Target Start/End: Complemental strand, 15553043 - 15552941
Alignment:
Q  401 gacacttttttgactt--gaagccttggttatacaattttcaatacaaaagtttctacatttgcttctttaaccattgtcccgggagcatcggttaacat 498  Q
    ||||||||||||||||  ||||| ||| |||||||||||||||| |||||||| ||| ||||||||| ||||||| |||| |||||||| ||||||| ||    
T  15553043 gacacttttttgactttagaagcattgattatacaattttcaatgcaaaagttactatatttgcttccttaaccagtgtctcgggagcaccggttaatat 15552944  T
Q  499 ttt 501  Q
    |||    
T  15552943 ttt 15552941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 628
Target Start/End: Original strand, 24315189 - 24315232
Alignment:
Q  585 atgattcgctctgctagggtttgcacctagcatgagcgcagccc 628  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||    
T  24315189 atgaatcgctctgctagagtttgcacctagcatgagcgctgccc 24315232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 590 - 674
Target Start/End: Original strand, 10430785 - 10430867
Alignment:
Q  590 tcgctctgctagggtttgcacctagcatgagcgcagcccctaagatttcaaaatttattctcaaattgctttgttccaattgatt 674  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||  ||||| ||   |||||||||||||| |||||||||    
T  10430785 tcgctcttctagggtttgcacctagcatgagcgcagccccta--attttcaaattcatcaccaaattgctttgtttcaattgatt 10430867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 403 - 500
Target Start/End: Original strand, 47220689 - 47220788
Alignment:
Q  403 cacttttttgactt--gaagccttggttatacaattttcaatacaaaagtttctacatttgcttctttaaccattgtcccgggagcatcggttaacattt 500  Q
    ||||||||||||||  |||| |||| ||| ||||||||||||||||||| || || ||||||||  |||| |  |||||  |||||| ||||||||||||    
T  47220689 cacttttttgacttttgaagtcttgattacacaattttcaatacaaaagcttttatatttgctttcttaatcggtgtcctaggagcagcggttaacattt 47220788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 427 - 473
Target Start/End: Complemental strand, 14258206 - 14258160
Alignment:
Q  427 ttatacaattttcaatacaaaagtttctacatttgcttctttaacca 473  Q
    ||||||| ||||| ||||||||||| ||| |||||||||||||||||    
T  14258206 ttatacagttttcgatacaaaagttactatatttgcttctttaacca 14258160  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 680 - 730
Target Start/End: Original strand, 30730040 - 30730090
Alignment:
Q  680 ctccactcacatattcatcacatgttctttcaatttcattgtgagtgctag 730  Q
    |||||||||||||||||| || || || ||||| |||||||||||||||||    
T  30730040 ctccactcacatattcattacttgctcattcaaattcattgtgagtgctag 30730090  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 590 - 624
Target Start/End: Original strand, 7653134 - 7653168
Alignment:
Q  590 tcgctctgctagggtttgcacctagcatgagcgca 624  Q
    ||||||||||||||||||||||||||| |||||||    
T  7653134 tcgctctgctagggtttgcacctagcaagagcgca 7653168  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 450 - 500
Target Start/End: Complemental strand, 29247318 - 29247268
Alignment:
Q  450 tttctacatttgcttctttaaccattgtcccgggagcatcggttaacattt 500  Q
    |||||||||||  ||| |||||||||| |||||| ||||||||||||||||    
T  29247318 tttctacatttaattccttaaccattgccccgggggcatcggttaacattt 29247268  T

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