View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1809_low_13 (Length: 421)
Name: NF1809_low_13
Description: NF1809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1809_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 98 - 266
Target Start/End: Complemental strand, 10371182 - 10371014
Alignment:
| Q |
98 |
caaacaaccatagatgttgatattgagtactaatctttctcatacgaatgagtttaggattagtaattaaggaactccatttcttgaatacaagcctagc |
197 |
Q |
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| T |
10371182 |
caaacaaccatagatgttgatattgagtaccaatctttctcatacgaatgagtttaggattagtaattaaggaactccattatttgaacacgagcctagc |
10371083 |
T |
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| Q |
198 |
attctaggaacttttgagtggaaaccacccaaacacatttgaaaaatatcatcattagaaagaaataat |
266 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
10371082 |
attctaggaacttttgagtggaaaccacccaaacacatttgaagaatatcatcattagaaagaaataat |
10371014 |
T |
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