View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1809_low_38 (Length: 249)
Name: NF1809_low_38
Description: NF1809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1809_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 32119127 - 32119345
Alignment:
| Q |
13 |
aatattggaaacacgaaattggcatgtgatgattcgctgagtccgttggaaatttcagcttcagcatacttccaaactactcacctaataatcaaaatat |
112 |
Q |
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| T |
32119127 |
aatattggaaacacgaaattggcatgtgatgattcgctgagtccgttggaaatttcagcttcagcatacttccaaactactcacctaataatcaaaatat |
32119226 |
T |
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| Q |
113 |
acctcgaatcttcatctctcgtgcatgatgcatgcatatatatttgtggtatgcattagcacacaccaacccctcttatatatataccattcaaattcta |
212 |
Q |
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| T |
32119227 |
acctcgaatcttcatctctcgtgcatgatgcatgcatatatatttgtggtatacattagcacacaccaa-ccctcttatatatataccattcaaattcta |
32119325 |
T |
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| Q |
213 |
gtaattggaattaatatttt |
232 |
Q |
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|||||||||||||||||||| |
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| T |
32119326 |
gtaattggaattaatatttt |
32119345 |
T |
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