View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1809_low_48 (Length: 235)
Name: NF1809_low_48
Description: NF1809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1809_low_48 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 24604637 - 24604449
Alignment:
| Q |
33 |
ttgaaacttcttctttactgtgaatctccaagtggtcctaataattcttttaaattatgcaaatttgttcttatatttttcaaaaaattaggcattgatc |
132 |
Q |
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| T |
24604637 |
ttgaaacttcttctttactgtgaatctccaagtggtcctaataattcttttaaattatgcaaatttgttcttatatttttcaaaaatttaggcattgatc |
24604538 |
T |
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| Q |
133 |
cctatattttcaaactttataaattaaccccctataatatttttaaagttgcaaattgctcactataaatgtttaaattttctaaattg |
221 |
Q |
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| T |
24604537 |
cctatattttcaaactttataaattaaccccctataatatttttaaagttgcaaattgctcactataaatgtttaaattttctaaattg |
24604449 |
T |
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