View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18103_high_12 (Length: 341)

Name: NF18103_high_12
Description: NF18103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18103_high_12
NF18103_high_12
[»] chr7 (25 HSPs)
chr7 (90-341)||(18873169-18873420)
chr7 (95-341)||(15167984-15168230)
chr7 (99-341)||(10895795-10896037)
chr7 (91-333)||(14422802-14423043)
chr7 (84-341)||(12709833-12710090)
chr7 (84-341)||(13122904-13123161)
chr7 (95-333)||(16009395-16009631)
chr7 (84-334)||(13743526-13743774)
chr7 (84-303)||(12590633-12590850)
chr7 (84-303)||(13007281-13007497)
chr7 (97-291)||(16677152-16677348)
chr7 (97-291)||(17651388-17651584)
chr7 (58-150)||(21230923-21231015)
chr7 (71-150)||(20311026-20311107)
chr7 (95-150)||(11382871-11382926)
chr7 (95-150)||(11389348-11389403)
chr7 (58-150)||(148619-148711)
chr7 (95-214)||(13679428-13679548)
chr7 (94-149)||(2971254-2971309)
chr7 (94-149)||(20906461-20906516)
chr7 (95-149)||(11311059-11311113)
chr7 (89-130)||(831628-831669)
chr7 (89-130)||(1196808-1196849)
chr7 (89-130)||(34958578-34958619)
chr7 (95-151)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (90-341)||(22750950-22751201)
chr5 (58-333)||(38144500-38144773)
chr5 (95-333)||(28370055-28370291)
chr5 (95-333)||(19512204-19512441)
chr5 (90-303)||(23528479-23528690)
chr5 (71-150)||(22438723-22438803)
chr5 (58-150)||(42961566-42961658)
chr5 (95-159)||(18407944-18408008)
chr5 (95-159)||(23111200-23111264)
chr5 (58-110)||(1856445-1856497)
chr5 (58-110)||(21674415-21674467)
chr5 (94-149)||(19236900-19236955)
chr5 (83-209)||(34830024-34830150)
chr5 (94-147)||(22461158-22461211)
chr5 (94-147)||(22467782-22467835)
[»] chr3 (24 HSPs)
chr3 (95-341)||(14762758-14763004)
chr3 (97-341)||(38310802-38311046)
chr3 (97-327)||(20247791-20248021)
chr3 (97-334)||(24192771-24193009)
chr3 (95-333)||(9534146-9534382)
chr3 (94-333)||(23370505-23370743)
chr3 (71-263)||(16801444-16801635)
chr3 (94-285)||(24933828-24934016)
chr3 (97-330)||(55499104-55499337)
chr3 (84-303)||(41455087-41455304)
chr3 (95-156)||(18929239-18929300)
chr3 (95-159)||(17240513-17240577)
chr3 (58-110)||(24122221-24122273)
chr3 (58-110)||(13967762-13967814)
chr3 (58-110)||(13973237-13973289)
chr3 (94-149)||(13302240-13302295)
chr3 (94-149)||(13323787-13323842)
chr3 (94-208)||(10389443-10389557)
chr3 (94-208)||(10414532-10414646)
chr3 (94-208)||(10421202-10421316)
chr3 (94-149)||(12033444-12033499)
chr3 (94-149)||(13312896-13312951)
chr3 (94-149)||(17131732-17131787)
chr3 (94-149)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (78-341)||(11834-12097)
scaffold0026 (94-333)||(111504-111741)
[»] chr6 (24 HSPs)
chr6 (95-328)||(23057760-23057993)
chr6 (84-341)||(29614136-29614393)
chr6 (95-333)||(23839016-23839253)
chr6 (58-333)||(18800255-18800529)
chr6 (84-333)||(10986170-10986418)
chr6 (95-330)||(4477678-4477912)
chr6 (84-229)||(930085-930229)
chr6 (97-333)||(21565214-21565449)
chr6 (84-303)||(12168212-12168428)
chr6 (84-303)||(19287121-19287337)
chr6 (84-303)||(19785859-19786075)
chr6 (84-303)||(19878305-19878521)
chr6 (84-303)||(19884081-19884297)
chr6 (94-283)||(34639986-34640173)
chr6 (94-283)||(34646660-34646847)
chr6 (58-150)||(24512807-24512899)
chr6 (94-208)||(25469704-25469816)
chr6 (95-291)||(9187352-9187550)
chr6 (95-151)||(25397172-25397228)
chr6 (95-151)||(19471335-19471391)
chr6 (95-151)||(25348486-25348542)
chr6 (94-178)||(31252394-31252478)
chr6 (97-151)||(25598643-25598697)
chr6 (58-109)||(933615-933666)
[»] scaffold1773 (1 HSPs)
scaffold1773 (87-341)||(988-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (87-341)||(49989-50241)
[»] chr4 (13 HSPs)
chr4 (84-341)||(8045822-8046078)
chr4 (84-341)||(11847916-11848179)
chr4 (94-283)||(53483573-53483760)
chr4 (58-150)||(15408139-15408231)
chr4 (94-284)||(27906130-27906321)
chr4 (95-151)||(8834895-8834951)
chr4 (95-151)||(13888641-13888697)
chr4 (97-178)||(14486632-14486713)
chr4 (95-151)||(15245215-15245271)
chr4 (100-151)||(22724691-22724742)
chr4 (58-109)||(43284008-43284059)
chr4 (89-130)||(15747551-15747592)
chr4 (95-151)||(15308120-15308176)
[»] scaffold0029 (1 HSPs)
scaffold0029 (84-303)||(111728-111948)
[»] scaffold0924 (1 HSPs)
scaffold0924 (84-341)||(740-997)
[»] chr2 (19 HSPs)
chr2 (95-333)||(19661454-19661690)
chr2 (95-333)||(6483536-6483772)
chr2 (95-333)||(6487003-6487239)
chr2 (84-291)||(26583687-26583892)
chr2 (97-333)||(23089057-23089292)
chr2 (97-333)||(23878826-23879060)
chr2 (95-333)||(23101463-23101700)
chr2 (94-208)||(5706023-5706137)
chr2 (58-109)||(6260135-6260186)
chr2 (95-159)||(23265133-23265197)
chr2 (95-159)||(23280201-23280265)
chr2 (95-156)||(21908353-21908414)
chr2 (58-102)||(19665037-19665081)
chr2 (95-151)||(24661576-24661632)
chr2 (94-149)||(10577-10632)
chr2 (84-275)||(23168288-23168483)
chr2 (84-275)||(23579545-23579740)
chr2 (94-149)||(25180929-25180984)
chr2 (85-166)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (97-334)||(14398-14635)
[»] chr8 (17 HSPs)
chr8 (97-341)||(8727735-8727979)
chr8 (94-333)||(44477441-44477678)
chr8 (94-333)||(44492599-44492836)
chr8 (84-341)||(23866423-23866680)
chr8 (58-333)||(27940815-27941091)
chr8 (84-303)||(17054440-17054656)
chr8 (95-204)||(18614217-18614327)
chr8 (58-150)||(14056527-14056619)
chr8 (95-159)||(23482053-23482117)
chr8 (62-150)||(25111976-25112064)
chr8 (58-110)||(30765873-30765925)
chr8 (95-151)||(39364919-39364975)
chr8 (95-149)||(29643386-29643440)
chr8 (94-149)||(24320670-24320725)
chr8 (59-119)||(21325730-21325791)
chr8 (59-118)||(21321132-21321192)
chr8 (95-151)||(21931696-21931752)
[»] scaffold0247 (1 HSPs)
scaffold0247 (58-333)||(11159-11433)
[»] chr1 (12 HSPs)
chr1 (95-333)||(20437024-20437261)
chr1 (84-303)||(41111884-41112100)
chr1 (95-159)||(32651563-32651627)
chr1 (95-150)||(19663517-19663572)
chr1 (95-159)||(18712790-18712854)
chr1 (95-151)||(20805320-20805376)
chr1 (95-150)||(11158093-11158148)
chr1 (97-151)||(10811785-10811839)
chr1 (94-149)||(20851132-20851187)
chr1 (94-149)||(20857759-20857814)
chr1 (94-149)||(21706276-21706331)
chr1 (94-149)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (94-333)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (94-333)||(1525-1763)
[»] scaffold0117 (2 HSPs)
scaffold0117 (84-341)||(1887-2143)
scaffold0117 (84-341)||(8564-8820)
[»] scaffold0090 (1 HSPs)
scaffold0090 (58-334)||(17985-18261)
[»] scaffold0058 (1 HSPs)
scaffold0058 (84-334)||(109-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (58-291)||(30715-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (97-333)||(3295-3531)
[»] scaffold0077 (1 HSPs)
scaffold0077 (97-333)||(3624-3859)
[»] scaffold0796 (2 HSPs)
scaffold0796 (89-285)||(1727-1920)
scaffold0796 (89-285)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (90-177)||(904-991)
scaffold0456 (90-177)||(8049-8136)
scaffold0456 (238-334)||(806-901)
scaffold0456 (238-334)||(7951-8046)
[»] scaffold0634 (1 HSPs)
scaffold0634 (254-341)||(3471-3558)
[»] scaffold0107 (1 HSPs)
scaffold0107 (58-150)||(40495-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (88-206)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (61-150)||(135473-135562)
[»] scaffold0235 (1 HSPs)
scaffold0235 (58-148)||(22556-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (71-150)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (95-159)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (95-159)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (95-150)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (95-159)||(8-72)
[»] scaffold0249 (1 HSPs)
scaffold0249 (58-102)||(2212-2256)
[»] scaffold0146 (1 HSPs)
scaffold0146 (95-159)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (95-159)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (84-146)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (84-284)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (84-183)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (94-178)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (95-214)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (95-151)||(12296-12352)
[»] scaffold0139 (1 HSPs)
scaffold0139 (95-150)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (83-116)||(5487-5520)
[»] scaffold0001 (1 HSPs)
scaffold0001 (85-166)||(493019-493099)
[»] scaffold0348 (2 HSPs)
scaffold0348 (61-109)||(14620-14668)
scaffold0348 (94-149)||(9336-9391)
[»] scaffold0096 (1 HSPs)
scaffold0096 (91-151)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (97-284)||(73149-73337)
[»] scaffold0127 (1 HSPs)
scaffold0127 (94-149)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (94-149)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (95-149)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (94-178)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (95-151)||(2628-2684)


Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 90 - 341
Target Start/End: Complemental strand, 18873420 - 18873169
Alignment:
Q  90 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 189  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  190 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 289  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 18873221  T
Q  290 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  18873220 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 18873169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 95 - 341
Target Start/End: Complemental strand, 15168230 - 15167984
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 15168031  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  15168030 attgattgaaaattatgagtgattggatgaattgatgaatttgtgta 15167984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 99 - 341
Target Start/End: Original strand, 10895795 - 10896037
Alignment:
Q  99 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 197  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  198 gatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaatt 297  Q
    ||||||||||| ||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  298 gattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||| ||||||||| |||||||||||||||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgta 10896037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 91 - 333
Target Start/End: Complemental strand, 14423043 - 14422802
Alignment:
Q  91 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 189  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  190 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 289  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  14422943 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  290 cataaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    |||||||||||||| ||||||||  |||||||||||||||||||    
T  14422844 cataaattgattga-aattatgattgattggatgaattgatgaa 14422802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 84 - 341
Target Start/End: Original strand, 12709833 - 12710090
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 12710030  T
Q  283 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||| |||| |||||  ||| ||||||| |||||||||||||||||||||||||||    
T  12710031 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 12710090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 84 - 341
Target Start/End: Original strand, 13122904 - 13123161
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 13123101  T
Q  283 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||| |||| |||||  ||| ||||||| |||||||||||||||||||||||||||    
T  13123102 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 13123161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 16009631 - 16009395
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 194  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaa 333  Q
    | ||||||| ||||||||  |||||||||||||||||||    
T  16009432 actgattga-aattatgattgattggatgaattgatgaa 16009395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 84 - 334
Target Start/End: Complemental strand, 13743774 - 13743526
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| ||||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgc 13743576  T
Q  284 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 334  Q
    ||||||||||||||| |||| |||||||   | |||||| |||||||||||    
T  13743575 tgtgatcataaattggttga-aattatgcttggttggataaattgatgaat 13743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 84 - 303
Target Start/End: Original strand, 12590633 - 12590850
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| ||||||||| ||||||| ||||||||||    
T  12590732 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgc 12590829  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  12590830 tgtaatccattaattgattga 12590850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 13007497 - 13007281
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  13007398 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 13007302  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  13007301 tgtaatccatgaattgattga 13007281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 97 - 291
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 194  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 291  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 97 - 291
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 194  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 291  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 17651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 21230923 - 21231015
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230923 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 20311026 - 20311107
Alignment:
Q  71 tgctgtgtaatcattctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311026 tgctgtgcaatctttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 148711 - 148619
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| |||  |||||||||||||    
T  148711 taggaactgattgtgttgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 148619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 13679548 - 13679428
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 193  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 13679449  T
Q  194 tgatgatgattctgaagggaa 214  Q
    ||||| ||||| |||| ||||    
T  13679448 tgatgctgattttgaaaggaa 13679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  89 caaaactaaggtaagggtgagactatctctcgataatcataa 130  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  89 caaaactaaggtaagggtgagactatctctcgataatcataa 130  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  89 caaaactaaggtaagggtgagactatctctcgataatcataa 130  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 90 - 341
Target Start/End: Complemental strand, 22751201 - 22750950
Alignment:
Q  90 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 189  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  190 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 289  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 22751002  T
Q  290 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  22751001 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 22750950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 58 - 333
Target Start/End: Original strand, 38144500 - 38144773
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38144500 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 38144599  T
Q  158 tgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcag 257  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||||| ||||||| ||    
T  38144600 tgcataattttggaaaataaattgagggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttag 38144698  T
Q  258 aatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||  |||||||||||||||||||    
T  38144699 aatgaaaacttaatctatactgttgttgtgatcataaattgattga-aattacgattgattggatgaattgatgaa 38144773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 95 - 333
Target Start/End: Original strand, 28370055 - 28370291
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 194  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||| ||||||||  ||| |||||||||||||||    
T  28370254 attgattga-aattatgattgatgggatgaattgatgaa 28370291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 19512441 - 19512204
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 193  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 293  Q
    ||||||||||| || |||| |||||||| | |||||||||||||| ||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  294 aattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  19512242 aattgattga-aattatgattgattggatgaattgatgaa 19512204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 23528690 - 23528479
Alignment:
Q  90 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 189  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  190 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 289  Q
    ||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||||| ||    
T  23528591 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaat 23528494  T
Q  290 -cataaattgattga 303  Q
     ||| ||||||||||    
T  23528493 ccatgaattgattga 23528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 22438723 - 22438803
Alignment:
Q  71 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 42961658 - 42961566
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961658 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 1856445 - 1856497
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 110  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1856445 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 1856497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 21674415 - 21674467
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 110  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  21674415 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 21674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 34830150 - 34830024
Alignment:
Q  83 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattg 181  Q
    |||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| ||||||    
T  34830150 attctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattg 34830052  T
Q  182 agggttagggtttgatgatgattctgaa 209  Q
    ||  ||||||| ||||| ||||| ||||    
T  34830051 agaattagggtatgatgctgattttgaa 34830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 147  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 147  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 95 - 341
Target Start/End: Original strand, 14762758 - 14763004
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 14762957  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  14762958 attgattgaaaattatgagtgattggatgaattgatgaatttgtgta 14763004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 97 - 341
Target Start/End: Original strand, 38310802 - 38311046
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  197 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 296  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  297 tgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgta 38311046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 97 - 327
Target Start/End: Original strand, 20247791 - 20248021
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  197 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 296  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  297 tgattgagaattatgagcgattggatgaatt 327  Q
    ||||||| ||||||||| |||||||||||||    
T  20247991 tgattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 97 - 334
Target Start/End: Complemental strand, 24193009 - 24192771
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  196 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtg-atcataa 294  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaat 334  Q
    | ||||||| || |||||  |||||||| |||||||||||    
T  24192809 actgattga-aaatatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 9534382 - 9534146
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 194  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    ||||||||||||| || | |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||  ||||||||||    
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||| ||||||||  |||||||||||||||||||    
T  9534183 attgattga-aattatgattgattggatgaattgatgaa 9534146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 94 - 333
Target Start/End: Original strand, 23370505 - 23370743
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 192  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  193 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 292  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  293 aaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  23370704 aaattgattga-aattatgattgattggatgaattgatgaa 23370743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 71 - 263
Target Start/End: Original strand, 16801444 - 16801635
Alignment:
Q  71 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 170  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |    
T  16801444 tgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttg 16801542  T
Q  171 aagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 263  Q
    ||||| ||||||| |||||||| |||||||||||| ||| | |||  | ||||| |||||||||| | || |||||| | ||||| ||||||||    
T  16801543 aagataaaattgaaggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaa 16801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 94 - 285
Target Start/End: Original strand, 24933828 - 24934016
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 285  Q
    ||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||||||||||||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctg 24934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 330
Target Start/End: Original strand, 55499104 - 55499337
Alignment:
Q  97 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 193  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 293  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||   |||||||||||||||    
T  55499203 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcata 55499301  T
Q  294 aattgattgagaattatgagcgattggatgaattgat 330  Q
    |||||||||| || ||| |  ||||||||||||||||    
T  55499302 aattgattga-aaatataattgattggatgaattgat 55499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 84 - 303
Target Start/End: Original strand, 41455087 - 41455304
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||   |||     
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaa 41455185  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
      |||||| |||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||  ||||||||| ||||||| || | |||||    
T  41455186 aattagggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatccatatggttgc 41455283  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  41455284 tgtaatccatgaattgattga 41455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 156  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 24122221 - 24122273
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 110  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24122221 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 24122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 13967762 - 13967814
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 110  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  13967762 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13967814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 13973237 - 13973289
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 110  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  13973237 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13973289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 10389443 - 10389557
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  194 tgatgatgattctga 208  Q
    |||||||||||||||    
T  10389543 tgatgatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  194 tgatgatgattctga 208  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  194 tgatgatgattctga 208  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 78 - 341
Target Start/End: Original strand, 11834 - 12097
Alignment:
Q  78 taatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 177  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11834 taatctttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 11933  T
Q  178 attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 277  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  11934 attgagagttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgt 12033  T
Q  278 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||||    
T  12034 tgttgctgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgta 12097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 94 - 333
Target Start/End: Complemental strand, 111741 - 111504
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 293  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  294 aattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  111542 aattgattga-aattatgattgattggatgaattgatgaa 111504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 95 - 328
Target Start/End: Complemental strand, 23057993 - 23057760
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 23057794  T
Q  295 attgattgagaattatgagcgattggatgaattg 328  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23057793 attgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 84 - 341
Target Start/End: Original strand, 29614136 - 29614393
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg-aagataaattga 182  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  183 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||| ||  |||||| |||||||||||||||||| ||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttg 29614334  T
Q  283 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||||||| |||||||| | ||||||  |||||||||||||||||||||||||||    
T  29614335 ctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgta 29614393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 23839253 - 23839016
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 193  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 293  Q
    ||||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 23839055  T
Q  294 aattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  23839054 aattgattga-aattatgattgattggatgaattgatgaa 23839016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 58 - 333
Target Start/End: Complemental strand, 18800529 - 18800255
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 157  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18800529 taggaaccgattttgctgtgtaatccttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 18800430  T
Q  158 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 256  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | |||||||    
T  18800429 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttca 18800331  T
Q  257 gaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
     ||||||| |||||||||| |||||| |||||||| ||||||||||| || ||| |  |||||||||||||||||||    
T  18800330 aaatgaaatcttaatctatattgttgttgtgatcacaaattgattga-aaatataattgattggatgaattgatgaa 18800255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 84 - 333
Target Start/End: Original strand, 10986170 - 10986418
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattga 182  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  183 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  10986270 gggttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T
Q  283 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||    
T  10986369 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaa 10986418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 95 - 330
Target Start/End: Complemental strand, 4477912 - 4477678
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 193  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 293  Q
    |||||||||||||| |||| |||||||| | |||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  294 aattgattgagaattatgagcgattggatgaattgat 330  Q
    |||||||||| ||||||||  |||||||||| |||||    
T  4477713 aattgattga-aattatgattgattggatgatttgat 4477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcat 229  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  930185 ggttagggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 97 - 333
Target Start/End: Original strand, 21565214 - 21565449
Alignment:
Q  97 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 194  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  21565313 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 21565411  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||| || ||| |  |||||||||||||||||||    
T  21565412 attgattga-aaatataattgattggatgaattgatgaa 21565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 12168428 - 12168212
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 12168330  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  12168329 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 12168233  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  12168232 tgtaatccatgaattgattga 12168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 19287337 - 19287121
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19287238 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19287142  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  19287141 tgtaatccatgaattgattga 19287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 84 - 303
Target Start/End: Original strand, 19785859 - 19786075
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |||     
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaa 19785957  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19785958 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19786054  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  19786055 tgtaatccatgaattgattga 19786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 19878521 - 19878305
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19878423  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19878422 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19878326  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  19878325 tgtaatccatgaattgattga 19878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 19884297 - 19884081
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19884199  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19884198 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19884102  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  19884101 tgtaatccatgaattgattga 19884081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 94 - 283
Target Start/End: Original strand, 34639986 - 34640173
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   ||   ||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34640086 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34640173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 283
Target Start/End: Original strand, 34646660 - 34646847
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||   ||   ||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34646760 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 24512807 - 24512899
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    |||||||||||| ||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512807 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  194 tgatgatgattctga 208  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 291
Target Start/End: Complemental strand, 9187550 - 9187352
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat--aaattgagggttaggg 191  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||| ||||| || ||||||| || ||| | ||| ||  |||||| |  ||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaaatagatctaattgaattgttcttgaatataaaaattgggaattaggg 9187451  T
Q  192 tttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 291  Q
     |||||| ||||| |||| ||||    |||| ||||||||| | | ||||||||| || ||||||||||||   ||||||||||  ||||| ||||||||    
T  9187450 -ttgatgctgattttgaaaggaatgatgtaagaatcatgtttaatgtgttgtaatttagtgttcagaatgatttcttaatctataatgttgttgtgatca 9187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 178  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 933615 - 933666
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 109  Q
    |||||||||||| |||| || |||| ||||||||| ||||||||||||||||    
T  933615 taggaaccgattttgctatgcaatctttctgcaaatctaaggtaagggtgag 933666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 87 - 341
Target Start/End: Complemental strand, 1240 - 988
Alignment:
Q  87 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 186  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  187 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 286  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 1043  T
Q  287 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  1042 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 87 - 341
Target Start/End: Complemental strand, 50241 - 49989
Alignment:
Q  87 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 186  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  187 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 286  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 50044  T
Q  287 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  50043 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 49989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 84 - 341
Target Start/End: Original strand, 8045822 - 8046078
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
    ||||||||||||| ||  |||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgc 8046020  T
Q  284 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  8046021 tgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 8046078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 84 - 341
Target Start/End: Complemental strand, 11848179 - 11847916
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa----- 178  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || || ||         
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  179 -ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 277  Q
     ||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||| |||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgt 11847980  T
Q  278 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  11847979 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 11847916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 94 - 283
Target Start/End: Complemental strand, 53483760 - 53483573
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 192  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  193 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  53483661 ttgatgatgattctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 53483573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 15408231 - 15408139
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    |||||||||||| | ||||| |||| ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408231 taggaaccgatttttctgtgcaatctttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 284
Target Start/End: Complemental strand, 27906321 - 27906130
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 192  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  193 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 284  Q
     ||||| ||||| |||| | ||| | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  27906221 gtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 27906130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 178  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  100 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 43284008 - 43284059
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 109  Q
    ||||||||||||  |||||| |||| ||||||||| ||||||||||||||||    
T  43284008 taggaaccgatttcgctgtgcaatctttctgcaaatctaaggtaagggtgag 43284059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  89 caaaactaaggtaagggtgagactatctctcgataatcataa 130  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 111948 - 111728
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 182  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattga 111849  T
Q  183 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  111848 gggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctg 111749  T
Q  283 ctgtgatcataaattgattga 303  Q
    |||||||||||||||||||||    
T  111748 ctgtgatcataaattgattga 111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 183; Significance: 6e-99; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 84 - 341
Target Start/End: Original strand, 740 - 997
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 182  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  183 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||| || |||||||||||||||||| || |||||||||||| ||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct-tgttgttg 938  T
Q  283 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
     |||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||    
T  939 atgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgta 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 6e-99; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 95 - 333
Target Start/End: Original strand, 19661454 - 19661690
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 194  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||    
T  19661554 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataa 19661652  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||| ||||||||  |||||||||||||||||||    
T  19661653 attgattga-aattatgattgattggatgaattgatgaa 19661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 6483772 - 6483536
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 194  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||| ||||||||  ||| |||||||||||||||    
T  6483573 attgattga-aattatgattgatgggatgaattgatgaa 6483536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 6487239 - 6487003
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 194  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||| ||||||||  ||| |||||||||||||||    
T  6487040 attgattga-aattatgattgatgggatgaattgatgaa 6487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 84 - 291
Target Start/End: Complemental strand, 26583892 - 26583687
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 26583794  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
    |||||||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||    
T  26583793 ggttagggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgc 26583695  T
Q  284 tgtgatca 291  Q
    ||||||||    
T  26583694 tgtgatca 26583687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 97 - 333
Target Start/End: Original strand, 23089057 - 23089292
Alignment:
Q  97 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 194  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  23089156 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 23089254  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||| || ||| |  |||||||||||||||||||    
T  23089255 attgattga-aaatataattgattggatgaattgatgaa 23089292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 97 - 333
Target Start/End: Complemental strand, 23879060 - 23878826
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 195  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  196 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 295  Q
     |||||||||||| |||||  ||||||| |||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaa 23878863  T
Q  296 ttgattgagaattatgagcgattggatgaattgatgaa 333  Q
    |||||||| || ||  |  |||||||||||||||||||    
T  23878862 ttgattga-aaatagaattgattggatgaattgatgaa 23878826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 95 - 333
Target Start/End: Original strand, 23101463 - 23101700
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 192  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  193 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 292  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  ||||| |||||||||    
T  23101562 ttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcat 23101660  T
Q  293 aaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||||| || ||| |  ||||||||||||| |||||    
T  23101661 aaattgattga-aaatataattgattggatgaattcatgaa 23101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 5706023 - 5706137
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 192  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  193 ttgatgatgattctga 208  Q
    ||||||||||||||||    
T  5706122 ttgatgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 6260135 - 6260186
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260135 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 6260186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 156  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 19665037 - 19665081
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19665037 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 19665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 275
Target Start/End: Original strand, 23168288 - 23168483
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 178  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23168288 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23168386  T
Q  179 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 275  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23168387 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 275
Target Start/End: Original strand, 23579545 - 23579740
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 178  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23579545 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23579643  T
Q  179 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 275  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23579644 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  85 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 166  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 97 - 334
Target Start/End: Original strand, 14398 - 14635
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  196 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 295  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  296 ttgattgagaattatgagcgattggatgaattgatgaat 334  Q
     ||||||| || |||||  |||||||| |||||||||||    
T  14598 ctgattga-aaatatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 97 - 341
Target Start/End: Original strand, 8727735 - 8727979
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 195  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  196 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 295  Q
    | ||||||||||| ||| | |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  296 ttgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgta 8727979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 94 - 333
Target Start/End: Complemental strand, 44477678 - 44477441
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 293  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  294 aattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  44477479 aattgattga-aattatgattgattggatgaattgatgaa 44477441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 94 - 333
Target Start/End: Complemental strand, 44492836 - 44492599
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 193  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 293  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  294 aattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  44492637 aattgattga-aattatgattgattggatgaattgatgaa 44492599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 84 - 341
Target Start/End: Complemental strand, 23866680 - 23866423
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 23866483  T
Q  283 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgta 341  Q
    || ||||| |||| |||||  ||| ||||||| |||||||||||||||||||||||||||    
T  23866482 ctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 23866423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 58 - 333
Target Start/End: Original strand, 27940815 - 27941091
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    | |    
T  27940815 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgtttgatt 27940914  T
Q  158 tgcatagtt-ttggaagataa--attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgtt 254  Q
     | || ||| ||| || ||||  |||| |  ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| |||||||    
T  27940915 agaattgttcttgaaaaataagaattgggaattagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtt 27941013  T
Q  255 cagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||||| |||||||||  ||||| | |||||||||||||||||| ||||||||  |||||||||||||||||||    
T  27941014 cagaatgaaaatttaatctatactgttgttatgatcataaattgattga-aattatgattgattggatgaattgatgaa 27941091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 17054656 - 17054440
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  17054557 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 17054461  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  17054460 tgtaatccatgaattgattga 17054440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 193  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  194 tgatgatgatt 204  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 14056527 - 14056619
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    |||||||||||| || |||| |||| ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056527 taggaaccgattttgttgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 25112064 - 25111976
Alignment:
Q  62 aaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    |||||||| || |||| |||| |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112064 aaccgattttgttgtgcaatctttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 30765873 - 30765925
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 110  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  30765873 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 30765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 21325730 - 21325791
Alignment:
Q  59 aggaaccgattgtgctgtgtaat-cattctgcaaaactaaggtaagggtgagactatctctc 119  Q
    ||||||||||| ||||||| ||| | ||||||||| |||||||||||||||| ||| |||||    
T  21325730 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggtgaggctaactctc 21325791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 21321132 - 21321192
Alignment:
Q  59 aggaaccgattgtgctgtgtaat-cattctgcaaaactaaggtaagggtgagactatctct 118  Q
    ||||||||||| ||||||| ||| | ||||||||| |||||||||||| ||||||| ||||    
T  21321132 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggcgagactaactct 21321192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 58 - 333
Target Start/End: Complemental strand, 11433 - 11159
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 157  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11433 taggaaccgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 11334  T
Q  158 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 256  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | |||||||    
T  11333 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttca 11235  T
Q  257 gaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
     ||||||| ||||||| ||  |||||||||||||| ||||||||||| || ||| |  |||||||||||||||||||    
T  11234 aaatgaaatcttaatccatactgttgctgtgatcacaaattgattga-aaatataattgattggatgaattgatgaa 11159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 95 - 333
Target Start/End: Original strand, 20437024 - 20437261
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 193  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  194 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 293  Q
    |||||||||||||| |||| |||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  20437124 tgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 20437222  T
Q  294 aattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  20437223 aattgattga-aattatgattgattggatgaattgatgaa 20437261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 84 - 303
Target Start/End: Complemental strand, 41112100 - 41111884
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||  |||     
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaa 41112002  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
     |||||||||||||||||||||||| ||  |||| ||||  |   ||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  41112001 agttagggtttgatgatgattctgatgg--aatgagtaaagacggtgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 41111905  T
Q  284 tgtgat-cataaattgattga 303  Q
    ||| || ||| ||||||||||    
T  41111904 tgtaatccatgaattgattga 41111884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 94 - 333
Target Start/End: Original strand, 10195 - 10433
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 192  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  193 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 292  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  293 aaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  10394 aaattgattga-aattatgattgattggatgaattgatgaa 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 94 - 333
Target Start/End: Original strand, 1525 - 1763
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 192  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  193 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 292  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  293 aaattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  1724 aaattgattga-aattatgattgattggatgaattgatgaa 1763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 84 - 341
Target Start/End: Original strand, 1887 - 2143
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 182  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  183 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  1987 gggttagggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttg 2084  T
Q  283 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||||||| |||||||| | | ||||| ||||| |||||||||||||||||||||    
T  2085 ctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgta 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 84 - 341
Target Start/End: Original strand, 8564 - 8820
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 182  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  183 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  8664 gggttagggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttg 8761  T
Q  283 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||||||| |||||||| | | || || ||||| |||||||||||||||||||||    
T  8762 ctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgta 8820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 58 - 334
Target Start/End: Complemental strand, 18261 - 17985
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 157  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  18261 taggaaccgattgtgttgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaat 18162  T
Q  158 tgcatag-ttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctg-ttgtaatataatgttc 255  Q
    ||| ||| ||| |||| ||||||||||||||| ||||| ||||||||||| | ||||||| ||||||  |||||||||||||| ||||||| | |||| |    
T  18161 tgcttagctttaggaaaataaattgagggttaaggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtcc 18063  T
Q  256 agaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 334  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||  ||  |||||||| |||||||||||    
T  18062 agaatgaaaacttaacctatgttgttgctgtgatcatgaattgattga-aatttggattgattggataaattgatgaat 17985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 84 - 334
Target Start/End: Complemental strand, 356 - 109
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 183  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 258  T
Q  184 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 283  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| |||     
T  257 ggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattga 159  T
Q  284 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 334  Q
    ||||||||||||||| |||| ||||||||  | |||||| |||||||||||    
T  158 tgtgatcataaattggttga-aattatgattggttggataaattgatgaat 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 58 - 291
Target Start/End: Complemental strand, 30949 - 30715
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 157  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30949 taggaatcgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 30850  T
Q  158 tgcatagttttggaagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 256  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||| ||| |||||  | ||||  |||||||||| | ||||||||  | |||| ||    
T  30849 tgcatagttttggaaggtaaaattgaggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgca 30750  T
Q  257 gaatgaaaacttaatctatgttgttgctgtgatca 291  Q
    |||||||  | ||||||||  ||||| ||||||||    
T  30749 gaatgaattcctaatctataatgttgatgtgatca 30715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 97 - 333
Target Start/End: Original strand, 3295 - 3531
Alignment:
Q  97 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 194  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  195 gatgatgattctgaagggaaatgggtaat-aatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 293  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  |||||||||||||| |    
T  3394 gatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcaca 3492  T
Q  294 aattgattgagaattatgagcgattggatgaattgatgaa 333  Q
    |||||||||| || ||| |  |||||||||||||||||||    
T  3493 aattgattga-aaatataattgattggatgaattgatgaa 3531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 333
Target Start/End: Original strand, 3624 - 3859
Alignment:
Q  97 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 194  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  195 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 294  Q
    |||||||||||||| ||| | |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||  ||||| |||||||||||    
T  3723 gatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataa 3821  T
Q  295 attgattgagaattatgagcgattggatgaattgatgaa 333  Q
    ||||||||| || ||| |  |||||||||||||||||||    
T  3822 attgattga-aaatataattgattggatgaattgatgaa 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 89 - 285
Target Start/End: Original strand, 1727 - 1920
Alignment:
Q  89 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 188  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  189 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 285  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  1826 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 89 - 285
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  89 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 188  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  189 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 285  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  5849 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  90 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 177  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  90 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 177  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 238 - 334
Target Start/End: Complemental strand, 901 - 806
Alignment:
Q  238 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 334  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  901 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 238 - 334
Target Start/End: Complemental strand, 8046 - 7951
Alignment:
Q  238 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 334  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  8046 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 3558 - 3471
Alignment:
Q  254 tcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 341  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgta 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 40495 - 40587
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40495 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 45268 - 45386
Alignment:
Q  88 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 186  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  187 tagggtttgatgatgattct 206  Q
    ||||||||||||||||||||    
T  45367 tagggtttgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 135562 - 135473
Alignment:
Q  61 gaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||||| ||||||| |||| ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135562 gaaccgattttgctgtgcaatctttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 22556 - 22646
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 148  Q
    |||||||||||| ||||||| |||  ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22556 taggaaccgattttgctgtgcaatatttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 17723 - 17643
Alignment:
Q  71 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 8 - 72
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 2212 - 2256
Alignment:
Q  58 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2212 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 2256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 159  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 146  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 284
Target Start/End: Original strand, 23559 - 23760
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 182  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| ||||||||||||||||| | ||||  | |||||| | |||||  |||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaattga 23658  T
Q  183 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 282  Q
    |  ||||||| ||||| ||||| |||| | |||   |||| ||||||||| | | ||||||||| | |||||||| ||||   ||||||||||  |||||    
T  23659 gaattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctataatgttg 23758  T
Q  283 ct 284  Q
    ||    
T  23759 ct 23760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  84 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 182  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  183 g 183  Q
    |    
T  680 g 680  T

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Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 178  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 1441 - 1321
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 193  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 1342  T
Q  194 tgatgatgattctgaagggaa 214  Q
    ||||| ||||| |||| ||||    
T  1341 tgatgctgattttgaaaggaa 1321  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 150  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 5520 - 5487
Alignment:
Q  83 attctgcaaaactaaggtaagggtgagactatct 116  Q
    ||||||||||||||||||||||||||||||||||    
T  5520 attctgcaaaactaaggtaagggtgagactatct 5487  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 166
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  85 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 166  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 14620 - 14668
Alignment:
Q  61 gaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 109  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||||||||||    
T  14620 gaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgag 14668  T

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Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  91 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 284
Target Start/End: Complemental strand, 73337 - 73149
Alignment:
Q  97 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 195  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  196 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 284  Q
    ||| ||||| |||| | ||  | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  73237 atgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 73149  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 149  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  94 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 178  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  95 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 151  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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