View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18104_low_17 (Length: 256)

Name: NF18104_low_17
Description: NF18104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18104_low_17
NF18104_low_17
[»] chr8 (39 HSPs)
chr8 (15-172)||(15073207-15073364)
chr8 (200-256)||(34101638-34101694)
chr8 (177-256)||(29672219-29672298)
chr8 (200-256)||(41709907-41709963)
chr8 (200-255)||(10467195-10467250)
chr8 (202-256)||(4052610-4052664)
chr8 (177-256)||(37664179-37664258)
chr8 (200-256)||(32019920-32019976)
chr8 (200-256)||(34063258-34063314)
chr8 (200-256)||(40389170-40389226)
chr8 (200-251)||(38047481-38047532)
chr8 (202-256)||(3251577-3251631)
chr8 (200-256)||(7394733-7394789)
chr8 (200-256)||(7591366-7591422)
chr8 (200-256)||(8672974-8673030)
chr8 (200-256)||(12753244-12753300)
chr8 (212-256)||(13406866-13406910)
chr8 (200-256)||(15001596-15001652)
chr8 (200-256)||(22999388-22999444)
chr8 (200-256)||(25478373-25478429)
chr8 (200-256)||(30542941-30542997)
chr8 (200-256)||(31513502-31513558)
chr8 (200-256)||(37474830-37474886)
chr8 (200-256)||(37618311-37618367)
chr8 (200-256)||(41548748-41548804)
chr8 (200-256)||(45446585-45446641)
chr8 (200-255)||(5968783-5968838)
chr8 (200-250)||(31732186-31732236)
chr8 (200-256)||(6386706-6386762)
chr8 (200-256)||(21272797-21272853)
chr8 (200-256)||(27104089-27104145)
chr8 (200-256)||(29610974-29611030)
chr8 (200-256)||(39643013-39643069)
chr8 (200-255)||(14004963-14005018)
chr8 (200-255)||(17520725-17520780)
chr8 (213-256)||(29563158-29563201)
chr8 (200-256)||(17805821-17805877)
chr8 (200-256)||(30501275-30501331)
chr8 (200-256)||(35225792-35225848)
[»] chr7 (35 HSPs)
chr7 (200-256)||(43158591-43158647)
chr7 (200-256)||(26994130-26994186)
chr7 (200-256)||(46633826-46633882)
chr7 (200-256)||(3922608-3922664)
chr7 (200-256)||(10932462-10932518)
chr7 (200-256)||(16963272-16963328)
chr7 (200-256)||(18386658-18386714)
chr7 (200-256)||(18470816-18470872)
chr7 (200-256)||(21785005-21785061)
chr7 (200-256)||(43368335-43368391)
chr7 (200-256)||(47953324-47953380)
chr7 (177-256)||(38301476-38301555)
chr7 (202-256)||(44748829-44748883)
chr7 (200-256)||(11250751-11250807)
chr7 (200-256)||(36769474-36769530)
chr7 (200-256)||(41211105-41211161)
chr7 (200-256)||(48894851-48894907)
chr7 (200-255)||(30849151-30849206)
chr7 (200-255)||(43213830-43213885)
chr7 (200-249)||(17237217-17237266)
chr7 (212-256)||(1870269-1870313)
chr7 (200-256)||(9913658-9913714)
chr7 (200-256)||(9927346-9927402)
chr7 (200-252)||(11321790-11321842)
chr7 (200-256)||(26371714-26371770)
chr7 (200-256)||(26910315-26910371)
chr7 (204-256)||(40753289-40753341)
chr7 (200-256)||(47316603-47316659)
chr7 (200-247)||(3891947-3891994)
chr7 (205-256)||(46448554-46448605)
chr7 (210-256)||(22723947-22723993)
chr7 (210-256)||(34295326-34295372)
chr7 (203-256)||(43189150-43189203)
chr7 (200-256)||(26700611-26700667)
chr7 (200-256)||(37967108-37967164)
[»] chr5 (31 HSPs)
chr5 (200-256)||(41459718-41459774)
chr5 (200-256)||(11963471-11963527)
chr5 (200-256)||(34795017-34795073)
chr5 (200-256)||(35701407-35701463)
chr5 (177-256)||(31644575-31644654)
chr5 (202-256)||(39788323-39788377)
chr5 (200-256)||(18470338-18470394)
chr5 (200-256)||(22493329-22493385)
chr5 (200-256)||(24181534-24181590)
chr5 (200-256)||(27838984-27839040)
chr5 (200-256)||(4689608-4689664)
chr5 (200-256)||(7208140-7208196)
chr5 (200-256)||(7523302-7523358)
chr5 (200-256)||(7770189-7770245)
chr5 (200-256)||(8136967-8137023)
chr5 (212-256)||(29241508-29241552)
chr5 (200-256)||(32092892-32092948)
chr5 (200-256)||(32528845-32528901)
chr5 (200-256)||(39918637-39918693)
chr5 (200-255)||(2351811-2351866)
chr5 (202-256)||(31770503-31770557)
chr5 (200-256)||(3735487-3735543)
chr5 (200-256)||(4664961-4665017)
chr5 (200-256)||(31879986-31880042)
chr5 (200-256)||(37148499-37148555)
chr5 (200-256)||(41790373-41790429)
chr5 (210-256)||(553527-553573)
chr5 (202-256)||(40489467-40489521)
chr5 (211-256)||(5598610-5598655)
chr5 (200-256)||(17031287-17031343)
chr5 (200-256)||(23091214-23091270)
[»] chr4 (56 HSPs)
chr4 (200-256)||(3649769-3649825)
chr4 (177-256)||(29785411-29785490)
chr4 (178-256)||(55594018-55594096)
chr4 (200-256)||(38486154-38486210)
chr4 (200-256)||(50727810-50727866)
chr4 (200-256)||(50735824-50735880)
chr4 (177-256)||(20517896-20517975)
chr4 (202-256)||(36886065-36886119)
chr4 (177-256)||(47361288-47361367)
chr4 (202-255)||(21202873-21202926)
chr4 (200-256)||(1231444-1231500)
chr4 (200-256)||(2787097-2787153)
chr4 (200-256)||(12601019-12601075)
chr4 (200-256)||(23522013-23522069)
chr4 (200-256)||(29616299-29616355)
chr4 (200-256)||(37865886-37865942)
chr4 (200-256)||(39078794-39078850)
chr4 (200-256)||(50729439-50729495)
chr4 (200-251)||(2725030-2725081)
chr4 (200-255)||(20694505-20694560)
chr4 (202-256)||(21580159-21580213)
chr4 (202-256)||(38812653-38812707)
chr4 (200-249)||(6776718-6776767)
chr4 (200-256)||(2629848-2629904)
chr4 (200-256)||(24002472-24002528)
chr4 (200-256)||(36497350-36497406)
chr4 (200-256)||(42870104-42870160)
chr4 (200-256)||(44324239-44324295)
chr4 (200-256)||(44649061-44649117)
chr4 (200-256)||(46680407-46680463)
chr4 (200-256)||(47642388-47642444)
chr4 (200-256)||(50178389-50178445)
chr4 (200-256)||(52949853-52949909)
chr4 (201-256)||(9512238-9512293)
chr4 (210-253)||(16320655-16320698)
chr4 (200-255)||(22318281-22318336)
chr4 (212-255)||(28115385-28115428)
chr4 (200-255)||(50186662-50186717)
chr4 (206-256)||(4325924-4325974)
chr4 (202-256)||(33552741-33552795)
chr4 (202-256)||(55065231-55065285)
chr4 (210-256)||(56154754-56154800)
chr4 (211-256)||(41711980-41712025)
chr4 (211-256)||(52319456-52319501)
chr4 (200-256)||(6973810-6973866)
chr4 (200-256)||(20802428-20802484)
chr4 (200-256)||(23328029-23328085)
chr4 (200-256)||(29593028-29593084)
chr4 (205-256)||(54543122-54543173)
chr4 (202-256)||(14296700-14296754)
chr4 (202-256)||(14314948-14315002)
chr4 (210-256)||(33176939-33176985)
chr4 (210-256)||(34930048-34930094)
chr4 (200-256)||(9807288-9807344)
chr4 (216-256)||(32181396-32181436)
chr4 (200-256)||(49151997-49152053)
[»] chr2 (36 HSPs)
chr2 (200-256)||(35114915-35114971)
chr2 (177-256)||(37308785-37308864)
chr2 (200-256)||(7259027-7259083)
chr2 (200-256)||(7761477-7761533)
chr2 (200-256)||(9732834-9732890)
chr2 (200-256)||(33889373-33889429)
chr2 (200-256)||(34338940-34338996)
chr2 (200-256)||(37863270-37863326)
chr2 (200-256)||(2086193-2086248)
chr2 (200-256)||(2644991-2645047)
chr2 (200-256)||(9717331-9717387)
chr2 (200-256)||(18685966-18686022)
chr2 (200-256)||(30326236-30326292)
chr2 (200-256)||(42365707-42365763)
chr2 (209-256)||(30798401-30798448)
chr2 (200-255)||(40692428-40692483)
chr2 (202-256)||(42706489-42706543)
chr2 (200-256)||(4641644-4641700)
chr2 (200-256)||(18793197-18793253)
chr2 (200-256)||(19513593-19513649)
chr2 (200-256)||(28824461-28824517)
chr2 (212-256)||(32498045-32498089)
chr2 (201-256)||(16104404-16104459)
chr2 (202-256)||(3913366-3913420)
chr2 (200-250)||(13829562-13829612)
chr2 (200-254)||(26981613-26981667)
chr2 (200-256)||(6896298-6896354)
chr2 (200-256)||(33366740-33366796)
chr2 (200-256)||(37003795-37003851)
chr2 (200-256)||(38992975-38993031)
chr2 (200-256)||(39461444-39461500)
chr2 (200-256)||(44284759-44284815)
chr2 (201-256)||(32766409-32766464)
chr2 (210-256)||(17540845-17540891)
chr2 (200-252)||(12939222-12939274)
chr2 (200-256)||(16177787-16177843)
[»] chr1 (41 HSPs)
chr1 (200-256)||(32289323-32289379)
chr1 (200-256)||(41967828-41967884)
chr1 (200-256)||(844703-844759)
chr1 (200-256)||(1351414-1351470)
chr1 (200-256)||(6711025-6711081)
chr1 (200-256)||(32270492-32270548)
chr1 (200-256)||(35387290-35387346)
chr1 (200-256)||(38663246-38663302)
chr1 (200-256)||(51264634-51264690)
chr1 (200-256)||(15539869-15539925)
chr1 (200-256)||(17327628-17327684)
chr1 (200-256)||(26118194-26118250)
chr1 (200-256)||(30105659-30105715)
chr1 (200-256)||(41973050-41973106)
chr1 (200-256)||(50304790-50304846)
chr1 (200-256)||(51703143-51703199)
chr1 (210-256)||(12890377-12890423)
chr1 (202-256)||(28340284-28340338)
chr1 (203-256)||(6029283-6029336)
chr1 (200-256)||(8839036-8839092)
chr1 (200-256)||(11772611-11772667)
chr1 (200-256)||(16451266-16451322)
chr1 (200-256)||(31004271-31004327)
chr1 (200-256)||(42510664-42510720)
chr1 (200-256)||(44738021-44738077)
chr1 (200-256)||(45490854-45490910)
chr1 (200-256)||(45658960-45659016)
chr1 (202-256)||(24339619-24339673)
chr1 (202-256)||(42512751-42512805)
chr1 (206-256)||(49303339-49303389)
chr1 (200-256)||(16386993-16387049)
chr1 (200-256)||(16437501-16437557)
chr1 (200-256)||(17888087-17888143)
chr1 (214-249)||(10384513-10384548)
chr1 (210-256)||(5109867-5109913)
chr1 (210-256)||(13994064-13994110)
chr1 (200-249)||(46155053-46155102)
chr1 (202-255)||(50540484-50540537)
chr1 (200-256)||(1601310-1601366)
chr1 (200-256)||(6143965-6144021)
chr1 (200-256)||(7184057-7184113)
[»] chr6 (26 HSPs)
chr6 (200-256)||(15276880-15276936)
chr6 (200-256)||(2615026-2615082)
chr6 (200-256)||(3259813-3259869)
chr6 (200-256)||(11212387-11212443)
chr6 (200-256)||(11382192-11382248)
chr6 (200-256)||(11613734-11613790)
chr6 (200-256)||(17867965-17868021)
chr6 (200-256)||(17877748-17877804)
chr6 (200-256)||(34176960-34177016)
chr6 (200-255)||(24203493-24203548)
chr6 (210-256)||(24242794-24242840)
chr6 (200-256)||(166866-166922)
chr6 (200-256)||(3932750-3932806)
chr6 (200-256)||(10960130-10960186)
chr6 (200-256)||(32409795-32409851)
chr6 (210-256)||(11279258-11279304)
chr6 (200-253)||(3290792-3290845)
chr6 (200-249)||(10485294-10485343)
chr6 (200-249)||(14807961-14808010)
chr6 (200-256)||(3379840-3379896)
chr6 (200-256)||(10324054-10324110)
chr6 (200-255)||(15277223-15277278)
chr6 (200-253)||(31870040-31870093)
chr6 (200-256)||(14925399-14925455)
chr6 (219-255)||(32132342-32132378)
chr6 (200-256)||(32860181-32860237)
[»] chr3 (41 HSPs)
chr3 (200-256)||(2135201-2135257)
chr3 (200-256)||(20255175-20255231)
chr3 (200-256)||(39052736-39052792)
chr3 (200-256)||(40094634-40094690)
chr3 (200-256)||(50386354-50386410)
chr3 (200-256)||(51259678-51259734)
chr3 (202-256)||(21221261-21221315)
chr3 (202-256)||(29585006-29585060)
chr3 (200-256)||(1344605-1344661)
chr3 (200-256)||(3867547-3867603)
chr3 (200-256)||(5442410-5442466)
chr3 (200-256)||(20609546-20609602)
chr3 (200-256)||(24571412-24571468)
chr3 (200-256)||(24721616-24721672)
chr3 (200-256)||(25860319-25860375)
chr3 (204-256)||(25927229-25927281)
chr3 (200-256)||(31882920-31882976)
chr3 (200-255)||(3695205-3695260)
chr3 (200-255)||(42636301-42636356)
chr3 (210-255)||(4851366-4851411)
chr3 (200-256)||(12349069-12349125)
chr3 (200-256)||(28675921-28675977)
chr3 (200-256)||(33364676-33364732)
chr3 (200-256)||(34026798-34026854)
chr3 (200-256)||(43175606-43175662)
chr3 (200-256)||(44117070-44117126)
chr3 (200-256)||(3964419-3964475)
chr3 (200-256)||(38213485-38213541)
chr3 (200-256)||(41682951-41683007)
chr3 (200-256)||(49748809-49748865)
chr3 (200-256)||(51925106-51925162)
chr3 (200-256)||(54622695-54622751)
chr3 (205-256)||(3864578-3864629)
chr3 (200-255)||(29646198-29646253)
chr3 (213-256)||(47958343-47958386)
chr3 (210-256)||(21374061-21374107)
chr3 (211-256)||(51296712-51296757)
chr3 (200-256)||(6179557-6179613)
chr3 (200-256)||(22484641-22484697)
chr3 (200-256)||(45690804-45690860)
chr3 (200-256)||(50678929-50678985)
[»] scaffold0957 (1 HSPs)
scaffold0957 (200-256)||(2406-2462)
[»] scaffold0054 (1 HSPs)
scaffold0054 (200-256)||(23705-23761)
[»] scaffold0027 (1 HSPs)
scaffold0027 (200-256)||(15302-15358)
[»] scaffold0014 (1 HSPs)
scaffold0014 (200-256)||(102079-102135)
[»] scaffold0729 (1 HSPs)
scaffold0729 (200-249)||(4489-4538)
[»] scaffold0280 (1 HSPs)
scaffold0280 (200-256)||(13597-13653)
[»] scaffold0098 (1 HSPs)
scaffold0098 (200-256)||(51568-51624)
[»] scaffold0650 (1 HSPs)
scaffold0650 (200-256)||(1553-1609)
[»] scaffold0360 (1 HSPs)
scaffold0360 (200-256)||(15283-15339)
[»] scaffold0025 (1 HSPs)
scaffold0025 (200-256)||(5349-5405)
[»] scaffold0181 (1 HSPs)
scaffold0181 (200-254)||(19002-19056)
[»] scaffold0169 (1 HSPs)
scaffold0169 (218-256)||(17982-18020)
[»] scaffold0208 (1 HSPs)
scaffold0208 (200-256)||(2249-2304)
[»] scaffold0050 (1 HSPs)
scaffold0050 (200-256)||(42861-42916)
[»] scaffold0004 (1 HSPs)
scaffold0004 (200-256)||(372874-372930)


Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 15073364 - 15073207
Alignment:
Q  15 ttatactacaaacatcttcccacctgcacagttatgcagaaagagcaaaagagaacacatgatttaactaacaatccagcttcattattaagcatgcaag 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15073364 ttatactgcaaacatcttcccacctgcacagttatgcagaaagagcaaaagagaacccatgatttaactaacaatccagcttcattattaagcatgcaag 15073265  T
Q  115 acaccactttgcaccttataaaccagaatatctatcgattcttcaaccaaaaccatta 172  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  15073264 acaccactttacaccttataaaccagagtatctatcgattcttcaaccaaaaccatta 15073207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 34101694 - 34101638
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  34101694 tgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 34101638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 29672219 - 29672298
Alignment:
Q  177 gtgcgtttgatttgctnnnnnnntgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||       ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  29672219 gtgcgtttgatttgctttaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgattcgtaaaactgtttc 29672298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 41709963 - 41709907
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  41709963 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 41709907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 10467250 - 10467195
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  10467250 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgttt 10467195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 4052664 - 4052610
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  4052664 aaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 4052610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 37664179 - 37664258
Alignment:
Q  177 gtgcgtttgatttgctnnnnnnntgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||       ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  37664179 gtgcgtttgatttgctaaaaaaatgaaggacaggacagaataactctagttgtccagtgtttgatttgtaaaactgtttc 37664258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 32019920 - 32019976
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  32019920 tgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttc 32019976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 34063314 - 34063258
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  34063314 tgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactctttc 34063258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 40389226 - 40389170
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  40389226 tgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 40389170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 38047532 - 38047481
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaact 251  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  38047532 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaact 38047481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 3251577 - 3251631
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  3251577 aaggataagacagaacaactctagttgtccagtgtttgatttataaaactgtttc 3251631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 7394733 - 7394789
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||  |||||||||||    
T  7394733 tgaaggacatgacagaacaactctagttgtccagtgtttgatttacaaaactgtttc 7394789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 7591366 - 7591422
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  7591366 tgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 7591422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 8672974 - 8673030
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||||||||    
T  8672974 tgaaggacaggacaaaacaactatagttgtccagtgtttgatttgtaaaactgtttc 8673030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 12753244 - 12753300
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||||||| ||||||||    
T  12753244 tgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaagactgtttc 12753300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 13406866 - 13406910
Alignment:
Q  212 cagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  13406866 cagaacaactctagttgtctagtgtttaatttgtaaaactgtttc 13406910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 15001652 - 15001596
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  15001652 tgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 15001596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 22999444 - 22999388
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||||  |||||| ||| |||||||||||||||||||||    
T  22999444 tgaaggacatgacagaacaactccggttgtccagtgtttgatttgtaaaactgtttc 22999388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 25478429 - 25478373
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| ||| ||| |||||||||||||||||    
T  25478429 tgaaggacaggacataacaactctagttgtccagtgtttaatttgtaaaactgtttc 25478373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 30542941 - 30542997
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||||||||    
T  30542941 tgaaggacatgacataacaactttagttgtccagtgtttgatttgtaaaactgtttc 30542997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 31513502 - 31513558
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||||||||| || ||| |||||||||||||| ||||||    
T  31513502 tgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaattgtttc 31513558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 37474886 - 37474830
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  37474886 tgaaggatatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 37474830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 37618311 - 37618367
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| |||||||  || |||||||||||||||||||||    
T  37618311 tgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaactgtttc 37618367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 41548804 - 41548748
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  41548804 tgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 41548748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 45446641 - 45446585
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||||| || ||||||||||||| ||| |||||||||||||||||||||    
T  45446641 tgaaggataagacaaaataactctagttgtccagtgtttgatttgtaaaactgtttc 45446585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 5968783 - 5968838
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||| | |||| |||||||||||||||| ||| ||||||||||||||||||||    
T  5968783 tgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgttt 5968838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 31732236 - 31732186
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaac 250  Q
    ||||||||| |||||||||||| |||||||| ||| |||||||||||||||    
T  31732236 tgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaac 31732186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 6386762 - 6386706
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||| ||| ||||||| |||||||| ||| |||||||| ||||||||||||    
T  6386762 tgaaggacaaaacataacaactgtagttgtccagtgtttgatttataaaactgtttc 6386706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 21272853 - 21272797
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||| || ||||||||| |||||||| ||| |||||||||||||||||||||    
T  21272853 tgaatgacacgagagaacaactttagttgtccagtgtttgatttgtaaaactgtttc 21272797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 27104145 - 27104089
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  |||||||||||||||||||  | | |||||||||||||||||||||    
T  27104145 tgaaggacagaacagaacaactctagttgttcaatgtttgatttgtaaaactgtttc 27104089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 29610974 - 29611030
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| | | |||||||||||||||||||||    
T  29610974 tgaaggacatgacagaacaacttcagttgtccaatgtttgatttgtaaaactgtttc 29611030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 39643069 - 39643013
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| ||| |||||||| ||||||||||||    
T  39643069 tgaaggacatgacagaacaacttcagttgtccagtgtttgatttttaaaactgtttc 39643013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 14004963 - 14005018
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||| | |||| ||||| | |||||||| ||||||||||||||||||||||||    
T  14004963 tgaaggataggacataacaattttagttgtccagtatttgatttgtaaaactgttt 14005018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 17520780 - 17520725
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||| ||||||||||||| |||||||  || |||||||||||||| |||||    
T  17520780 tgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaagtgttt 17520725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 29563158 - 29563201
Alignment:
Q  213 agaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||| || ||| |||||||||||||||||||||    
T  29563158 agaacaactctagttatccagtgtttgatttgtaaaactgtttc 29563201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 17805877 - 17805821
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  ||||| |||||||| ||||  ||| |||||||||||||||||||||    
T  17805877 tgaaggacataacagaccaactctaattgttcagtgtttgatttgtaaaactgtttc 17805821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 30501331 - 30501275
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| | ||||||||||  ||||| | ||| |||||||||||||||||||||    
T  30501331 tgaaggacatggcagaacaacttcagttgcccagtgtttgatttgtaaaactgtttc 30501275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 35225848 - 35225792
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||| ||||||| ||| |||| |||||||||| |||||    
T  35225848 tgaaggataggacagaacaactccagttgtccagtgtttggtttgtaaaacagtttc 35225792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 43158591 - 43158647
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  43158591 tgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 43158647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 26994130 - 26994186
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  26994130 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 26994186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 46633882 - 46633826
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  46633882 tgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 46633826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 3922608 - 3922664
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  3922608 tgaaggacatgacagaacaactctagttgtccagtgttttatttgtaaaactgtttc 3922664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 10932462 - 10932518
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  10932462 tgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttc 10932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 16963328 - 16963272
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  16963328 tgaaggacaggacagaacaactctaattgtccagtgtttgatttgtaaaactgtttc 16963272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 18386714 - 18386658
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||| |||||||||| ||| |||||||||||||||||||||    
T  18386714 tgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttc 18386658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 18470872 - 18470816
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||||||||    
T  18470872 tgaaggacaggatagaacaactctagttgtcgagtgtttgatttgtaaaactgtttc 18470816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 21785061 - 21785005
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  21785061 tgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttc 21785005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 43368391 - 43368335
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  43368391 tgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 43368335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 47953380 - 47953324
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  47953380 tgaacgacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 47953324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 38301555 - 38301476
Alignment:
Q  177 gtgcgtttgatttgctnnnnnnntgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||       ||||||||| ||||||||||||| | ||||| ||| |||||||||||||||||||||    
T  38301555 gtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactccaattgtccagtgtttgatttgtaaaactgtttc 38301476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 44748883 - 44748829
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||    
T  44748883 aaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttc 44748829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 11250807 - 11250751
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| ||| |||||||||| ||||||    
T  11250807 tgaaggacatgacagaacaactctagttgtccagtgtttcatttgtaaaattgtttc 11250751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 36769474 - 36769530
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  | |||||||||||||||||| ||| |||||||||||||||||||||    
T  36769474 tgaaggacagaatagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 36769530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 41211105 - 41211161
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||| | ||| |||||||||||||||||||||    
T  41211105 tgaaggacaggacagaacaactcaagttgcccagtgtttgatttgtaaaactgtttc 41211161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 48894907 - 48894851
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||||| ||||||    
T  48894907 tgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaattgtttc 48894851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 30849151 - 30849206
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    |||||||||||||||||||| |||||||||| | |  |||||||||||||||||||    
T  30849151 tgaaggacaagacagaacaattctagttgtccaatgattgatttgtaaaactgttt 30849206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 43213830 - 43213885
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||| ||| ||||||||||||  ||||||||||| ||||||||||||||||||||    
T  43213830 tgaagaacaggacagaacaacttcagttgtctagtgtttgatttgtaaaactgttt 43213885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 17237266 - 17237217
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaa 249  Q
    ||||||||| ||||||||||||| ||||||| ||| ||||||||||||||    
T  17237266 tgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaa 17237217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 1870313 - 1870269
Alignment:
Q  212 cagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||    
T  1870313 cagaacaactctagttgttcagtgtttgatttgtaaaactgtttc 1870269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 9913714 - 9913658
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| |||||||  || |||||||||||||||| ||||    
T  9913714 tgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttc 9913658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 9927402 - 9927346
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| |||||||  || |||||||||||||||| ||||    
T  9927402 tgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttc 9927346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 11321790 - 11321842
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactg 252  Q
    ||||| ||| ||||||||||||||||||||| | | |||||||||||||||||    
T  11321790 tgaagaacatgacagaacaactctagttgtccaatgtttgatttgtaaaactg 11321842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 26371714 - 26371770
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||||||||||| ||| ||||||||| |||||| ||||    
T  26371714 tgaaggataggacagaacaactctagttgtccagtgtttgatttgcaaaactatttc 26371770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 26910315 - 26910371
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| ||| ||||||||||||||| |||||    
T  26910315 tgaaggacatgacagaacaactacagttgtccagtgtttgatttgtaaaacagtttc 26910371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 40753341 - 40753289
Alignment:
Q  204 ggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||| |||||||||||||| |||||| | | |||||||||||||||||||||    
T  40753341 ggacatgacagaacaactctcgttgtccaatgtttgatttgtaaaactgtttc 40753289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 47316603 - 47316659
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||| ||||||||||||| ||| |||||||||||||| ||||||    
T  47316603 tgaaggatatgacagaataactctagttgtccagtgtttgatttgtaaaattgtttc 47316659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 3891947 - 3891994
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaa 247  Q
    ||||||||| ||||||||||||||||||||| | | ||||||||||||    
T  3891947 tgaaggacaggacagaacaactctagttgtccaatgtttgatttgtaa 3891994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 46448554 - 46448605
Alignment:
Q  205 gacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||||||||  ||||||||||| |||||||||||||| ||||||    
T  46448554 gacaagatagaacaacttcagttgtctagtgtttgatttgtaaaattgtttc 46448605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 22723947 - 22723993
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||| ||||||| ||| ||||||||||||||| |||||    
T  22723947 gacagaacaactccagttgtccagtgtttgatttgtaaaacagtttc 22723993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 34295326 - 34295372
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||| |||| || ||| |||||||||||||||||||||    
T  34295326 gacagaacaactccagttatccagtgtttgatttgtaaaactgtttc 34295372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 43189150 - 43189203
Alignment:
Q  203 aggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||| |||| |||||||||||||||| ||| |||||||| ||||| ||||||    
T  43189150 aggacatgacaaaacaactctagttgtccagtgtttgatttataaaaatgtttc 43189203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 26700667 - 26700611
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| ||||| || ||||||| ||| ||||||||||| |||||||||    
T  26700667 tgaaggacatgacataacaattccagttgtccagtgtttgatttgtataactgtttc 26700611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 37967164 - 37967108
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| ||||||| ||||| ||  || |||||||||||||||||||||    
T  37967164 tgaaggacatgacaaaacaactttagttctccggtgtttgatttgtaaaactgtttc 37967108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 41459774 - 41459718
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  41459774 tgaaggacatgacagaacaactctagttgtttagtatttgatttgtaaaactgtttc 41459718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 11963527 - 11963471
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  11963527 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 11963471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 34795073 - 34795017
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  34795073 tgaaggacatgacagaacaactctagttgtccaatatttgatttgtaaaactgtttc 34795017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 35701463 - 35701407
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  35701463 tgaaggacaagatagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 35701407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 31644654 - 31644575
Alignment:
Q  177 gtgcgtttgatttgctnnnnnnntgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||       ||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  31644654 gtgcgtttgatttgcttaaaaaatgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 31644575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 39788377 - 39788323
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||||||||||    
T  39788377 aaggacaggacagaacaattctagttgtccagtatttgatttgtaaaactgtttc 39788323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 18470338 - 18470394
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||    
T  18470338 tgaaggacaagacagaacaactccagttatccagtgtttgatttgtaaaactgtttc 18470394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 22493329 - 22493385
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  22493329 tgaaggacaggacagaacaactctagttgtccagtgtttaatttgtaaaactgtttc 22493385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 24181534 - 24181590
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||    
T  24181534 tgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttc 24181590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 27838984 - 27839040
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  27838984 tgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 27839040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 4689608 - 4689664
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  4689608 tgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 4689664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 7208140 - 7208196
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  ||||||||||| |||||||| ||| |||||||||||||||||||||    
T  7208140 tgaaggacagaacagaacaactttagttgtccagtgtttgatttgtaaaactgtttc 7208196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 7523358 - 7523302
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | |||||||||| |||||||||| ||| |||||||||||||||||||||    
T  7523358 tgaaggataggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttc 7523302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 7770189 - 7770245
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||| ||||||    
T  7770189 tgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaattgtttc 7770245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 8137023 - 8136967
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  8137023 tgaaggataggacagaacaactctagttgtccagtgtttgttttgtaaaactgtttc 8136967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 29241552 - 29241508
Alignment:
Q  212 cagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||    
T  29241552 cagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 29241508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 32092892 - 32092948
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||| ||||||  ||| |||||||||||||| ||||||    
T  32092892 tgaaggacaagacagaacaactccagttgtgcagtgtttgatttgtaaaattgtttc 32092948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 32528901 - 32528845
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||| ||||||||||||||  ||| |||||||||||||||||||||    
T  32528901 tgaaggacatgacaggacaactctagttgttcagtgtttgatttgtaaaactgtttc 32528845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 39918693 - 39918637
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||  ||||||||||||||| ||| |||||||||||||||||||||    
T  39918693 tgaaggacaggacaagacaactctagttgtccagtgtttgatttgtaaaactgtttc 39918637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 2351866 - 2351811
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||| ||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  2351866 tgaaggacaggacaggacaactctagttgttcagtgtttgatttgtaaaactgttt 2351811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 31770503 - 31770557
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||| |||||||||||||||  ||| |||||||||||||||||||||    
T  31770503 aaggacatgacataacaactctagttgttcagtgtttgatttgtaaaactgtttc 31770557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 3735543 - 3735487
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||| ||| ||||||||||||| ||||||| ||| ||||||||||||||| |||||    
T  3735543 tgaagaacatgacagaacaactccagttgtccagtgtttgatttgtaaaaccgtttc 3735487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 4665017 - 4664961
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| |||| || ||| ||||||||||||||| |||||    
T  4665017 tgaaggacatgacagaacaactccagttatccagtgtttgatttgtaaaacagtttc 4664961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 31879986 - 31880042
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||| | |||||||||||||||  ||| ||||||| |||||||||||||    
T  31879986 tgaaggacaagatataacaactctagttgttcagtgtttgattagtaaaactgtttc 31880042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 37148499 - 37148555
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||| ||||||| | | |||||||||||||||||||||    
T  37148499 tgaaggatatgacagaacaactccagttgtcaattgtttgatttgtaaaactgtttc 37148555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 41790373 - 41790429
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||| |||||||||| | |||||||| ||| |||||||||||||||||||||    
T  41790373 tgaaagacaggacagaacaattttagttgtccagtgtttgatttgtaaaactgtttc 41790429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 553573 - 553527
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||| || ||||||||| |||||||| ||||||||||||    
T  553573 gacagaacaactttaattgtctagtgtttgatttataaaactgtttc 553527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 40489521 - 40489467
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| ||||||| ||||||| ||||  ||| |||||||||||||||||||||    
T  40489521 aaggacaggacagaataactctaattgttcagtgtttgatttgtaaaactgtttc 40489467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 5598655 - 5598610
Alignment:
Q  211 acagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||| ||||||| | | |||||||||||||||||||||    
T  5598655 acagaacaactcaagttgtccaatgtttgatttgtaaaactgtttc 5598610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 17031343 - 17031287
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||  ||||||| | |||| || | |||||||||||||||||||||    
T  17031343 tgaaggacaagacaacacaactccacttgtataatgtttgatttgtaaaactgtttc 17031287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 23091214 - 23091270
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| ||||||| | ||| |||| ||||||| ||| |||||||||||||||||||||    
T  23091214 tgaatgacaagatataactactcaagttgtccagtgtttgatttgtaaaactgtttc 23091270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 3649825 - 3649769
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  3649825 tgaaggacaagacagaacaactccagttgtctagtgtttgatttgtaaaactgtttc 3649769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 29785411 - 29785490
Alignment:
Q  177 gtgcgtttgatttgctnnnnnnntgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||       ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  29785411 gtgcgtttgatttgctaaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 29785490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 55594096 - 55594018
Alignment:
Q  178 tgcgtttgatttgctnnnnnnntgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||||       ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  55594096 tgcgtttgatttgctaaaaaaatgaagaacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttc 55594018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 38486154 - 38486210
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  38486154 tgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 38486210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 50727810 - 50727866
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  50727810 tgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttc 50727866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 50735824 - 50735880
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  50735824 tgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttc 50735880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 20517896 - 20517975
Alignment:
Q  177 gtgcgtttgatttgctnnnnnnntgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||       ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  20517896 gtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttc 20517975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 36886119 - 36886065
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  36886119 aaggacaagacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttc 36886065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 47361288 - 47361367
Alignment:
Q  177 gtgcgtttgatttgctnnnnnnntgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||       ||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||    
T  47361288 gtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttc 47361367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 21202926 - 21202873
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21202926 aaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgttt 21202873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 1231500 - 1231444
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  1231500 tgaaggataggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 1231444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 2787153 - 2787097
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||| ||||||    
T  2787153 tgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaattgtttc 2787097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 12601075 - 12601019
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  12601075 tgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaacagtttc 12601019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 23522069 - 23522013
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||    
T  23522069 tgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttc 23522013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 29616355 - 29616299
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||||||||    
T  29616355 tgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 29616299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 37865942 - 37865886
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||    
T  37865942 tgaaggacacgacataacaactctagttgtccagtgtttgatttgtaaaactgtttc 37865886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 39078850 - 39078794
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  39078850 tgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 39078794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 50729439 - 50729495
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  50729439 tgaaggacaagacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 50729495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 2725030 - 2725081
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaact 251  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  2725030 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaact 2725081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 20694560 - 20694505
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    |||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||    
T  20694560 tgaaggacaacacagaacaactctagttgtccagtgtttaatttgtaaaactgttt 20694505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 21580213 - 21580159
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||||||||| |||| ||||| |||||||||||||||||||||||||    
T  21580213 aaggacaggacagaacaattctaattgtccagtatttgatttgtaaaactgtttc 21580159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 38812707 - 38812653
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||    
T  38812707 aaggacaggacataacaactctagttgtccagtgtttgatttgtaaaactgtttc 38812653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 6776767 - 6776718
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaa 249  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  6776767 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaa 6776718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 2629848 - 2629904
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| ||||||||||||||||  || |||||||||||||||||||||    
T  2629848 tgaaggacatgacataacaactctagttgtcccgtgtttgatttgtaaaactgtttc 2629904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 24002528 - 24002472
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  |||||||||||||||||||| ||| ||||||||||||||| |||||    
T  24002528 tgaaggacagtacagaacaactctagttgtccagtgtttgatttgtaaaacagtttc 24002472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 36497406 - 36497350
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | |||| |||||||||||||||| ||| |||||||||||||||||||||    
T  36497406 tgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttc 36497350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 42870160 - 42870104
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| ||||||||||||||||  || |||||||||||||||||||||    
T  42870160 tgaaggacatgacataacaactctagttgtccggtgtttgatttgtaaaactgtttc 42870104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 44324239 - 44324295
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  44324239 tgaaggacatgacagaacaactccagttgttcagtgtttgatttgtaaaactgtttc 44324295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 44649061 - 44649117
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| |||| || ||| |||||||||||||||||||||    
T  44649061 tgaaggacaggacagaacaactccagttatccagtttttgatttgtaaaactgtttc 44649117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 46680407 - 46680463
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||| |||||||||  ||| |||||||||||||||||||||    
T  46680407 tgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttc 46680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 47642388 - 47642444
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  47642388 tgaaggacaggacagaacaactccagttgttcagtgtttgatttgtaaaactgtttc 47642444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 50178389 - 50178445
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  50178389 tgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 50178445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 52949909 - 52949853
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| ||| ||| |||||||||||||||||    
T  52949909 tgaaggacacgacaaaacaactctagttgtccagtgtttcatttgtaaaactgtttc 52949853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 9512238 - 9512293
Alignment:
Q  201 gaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||| || |||||||||||||||||  ||| |||||||||||||||||||||    
T  9512238 gaaggacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttc 9512293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 16320698 - 16320655
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgt 253  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  16320698 gacagaacaactccagttgtccagtatttgatttgtaaaactgt 16320655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 22318281 - 22318336
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||| ||||||||||| | || |||||||| ||||||||||||||||||||    
T  22318281 tgaaggacatgacagaacaaccccagctgtctagtgtttgatttgtaaaactgttt 22318336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 28115428 - 28115385
Alignment:
Q  212 cagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  28115428 cagaacaactcaagttgtctagtgtttgatttgtaaaactgttt 28115385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 50186717 - 50186662
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    |||||||||||| |||||||||||||||||  ||| |||||||||||||| |||||    
T  50186717 tgaaggacaagaaagaacaactctagttgttcagtgtttgatttgtaaaattgttt 50186662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 4325974 - 4325924
Alignment:
Q  206 acaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||| |||||||||||||||  ||| |||||||||||||||||||||    
T  4325974 acaagacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttc 4325924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 33552741 - 33552795
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||| |||||||||||||||  ||| |||||||||||||||||||||    
T  33552741 aaggacaggacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttc 33552795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 55065231 - 55065285
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||||||||||||||||| |  ||| |||||||||||||||||||||    
T  55065231 aaggacatgacagaacaactctagttattcagtgtttgatttgtaaaactgtttc 55065285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 56154800 - 56154754
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||    
T  56154800 gacagaacaactttagttgtccagtgtttgatttgtaaaactgtttc 56154754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 41712025 - 41711980
Alignment:
Q  211 acagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  41712025 acagaacaactctagttgtccagtgtttgatttgtaaagctgtttc 41711980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 52319501 - 52319456
Alignment:
Q  211 acagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||||||||| | | |||||||||||||||||||||    
T  52319501 acagaacaactctagttgtccaatgtttgatttgtaaaactgtttc 52319456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 6973810 - 6973866
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || ||||||||| | |||||| ||| |||||||||||||||||||||    
T  6973810 tgaaggacaggatagaacaacttttgttgtccagtgtttgatttgtaaaactgtttc 6973866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 20802428 - 20802484
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | |||||||||||| ||||| || ||| |||||||||||||||||||||    
T  20802428 tgaaggataggacagaacaactttagttatccagtgtttgatttgtaaaactgtttc 20802484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 23328085 - 23328029
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | |||||||||||||||||||||  || ||||| |||||||||||||||    
T  23328085 tgaaggatatgacagaacaactctagttgtcatgtgtttgacttgtaaaactgtttc 23328029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 29593084 - 29593028
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||| ||  ||||||| ||| |||||||||||||||||||||    
T  29593084 tgaaggacaggacagaacaccttcagttgtccagtgtttgatttgtaaaactgtttc 29593028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 54543173 - 54543122
Alignment:
Q  205 gacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| ||||||||||||||||||||  ||| |||||||||||||||| ||||    
T  54543173 gacatgacagaacaactctagttgttcagtgtttgatttgtaaaactatttc 54543122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 14296754 - 14296700
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||| |||||||||| ||||| ||| |||||||||||||| ||||||    
T  14296754 aaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgtttc 14296700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 14315002 - 14314948
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||| |||||||||| ||||| ||| |||||||||||||| ||||||    
T  14315002 aaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgtttc 14314948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 33176939 - 33176985
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||| | |||||||| ||| |||||||||||||||||||||    
T  33176939 gacagaacaattttagttgtccagtgtttgatttgtaaaactgtttc 33176985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 34930094 - 34930048
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| ||||||| ||||| ||| |||||||||||||||||||||    
T  34930094 gacagaataactctaattgtccagtgtttgatttgtaaaactgtttc 34930048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 9807344 - 9807288
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||| ||||||  ||||||| ||| |||||||||||||||||||||    
T  9807344 tgaaggataggacaggacaacttcagttgtccagtgtttgatttgtaaaactgtttc 9807288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 32181436 - 32181396
Alignment:
Q  216 acaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||| |||||||| ||| |||||||||||||||||||||    
T  32181436 acaactttagttgtccagtgtttgatttgtaaaactgtttc 32181396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 49151997 - 49152053
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  ||||||||||| ||||| || ||| ||| |||||||||||||||||    
T  49151997 tgaaggacagaacagaacaactttagttatccagtgtttaatttgtaaaactgtttc 49152053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 35114971 - 35114915
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  35114971 tgaaggacaagacaggacaactctagttgtctagtgtttgatttgtaaaactgtttc 35114915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 37308864 - 37308785
Alignment:
Q  177 gtgcgtttgatttgctnnnnnnntgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||       ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  37308864 gtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 37308785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 7259083 - 7259027
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  7259083 tgaaggacatgacagaacaactctagctgtctagtgtttgatttgtaaaactgtttc 7259027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 7761477 - 7761533
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  7761477 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 7761533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 9732834 - 9732890
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  9732834 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 9732890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 33889429 - 33889373
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  33889429 tgaaggacaggacagaacaactctagttgtctagtgtttgatttgtaaaattgtttc 33889373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 34338996 - 34338940
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  34338996 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 34338940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 37863270 - 37863326
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  37863270 tgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 37863326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 2086248 - 2086193
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  2086248 tgaaggacaagacaga-caactctagttgtccagtgtttgatttgtaaaactgtttc 2086193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 2644991 - 2645047
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||||||||    
T  2644991 tgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 2645047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 9717387 - 9717331
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  9717387 tgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttc 9717331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 18686022 - 18685966
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  18686022 tgaaggacatgacagaataactctagttgtccagtgtttgatttgtaaaactgtttc 18685966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 30326236 - 30326292
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  30326236 tgaaggacaggacagagcaactctagttgtccagtgtttgatttgtaaaactgtttc 30326292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 42365763 - 42365707
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||    
T  42365763 tgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaaccgtttc 42365707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 30798401 - 30798448
Alignment:
Q  209 agacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  30798401 agacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 30798448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 40692483 - 40692428
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||    
T  40692483 tgaaggacaagacagaacaactctagttgtccagtgtttaatttgtgaaactgttt 40692428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 42706543 - 42706489
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||||||||| |||||||||| ||| |||||||||||||||||||||    
T  42706543 aaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttc 42706489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 4641700 - 4641644
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  4641700 tgaaggaaaagacagaacaactttagttgttcagtgtttgatttgtaaaactgtttc 4641644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 18793197 - 18793253
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||||||||||   ||| |||||||||||||||||||||    
T  18793197 tgaaggacatgacagaacaactctagttgctcagtgtttgatttgtaaaactgtttc 18793253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 19513593 - 19513649
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||||||||| || | | |||||||||||||||||||||    
T  19513593 tgaaggacaggacagaacaactctagttttccaatgtttgatttgtaaaactgtttc 19513649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 28824461 - 28824517
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  28824461 tgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 28824517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 32498089 - 32498045
Alignment:
Q  212 cagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||    
T  32498089 cagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 32498045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 16104459 - 16104404
Alignment:
Q  201 gaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||| | |||||||||||| |||||||| ||| |||||||||||||||||||||    
T  16104459 gaaggataggacagaacaactatagttgtccagtgtttgatttgtaaaactgtttc 16104404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 3913366 - 3913420
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| |||| ||||| |||||||||| ||| |||||||||||||||||||||    
T  3913366 aaggacatgacaaaacaattctagttgtccagtgtttgatttgtaaaactgtttc 3913420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 13829612 - 13829562
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaac 250  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||| ||||    
T  13829612 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtgaaac 13829562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 26981613 - 26981667
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtt 254  Q
    |||||||||  |||||||||||| ||||||| ||| |||||||||||||||||||    
T  26981613 tgaaggacagaacagaacaactccagttgtccagtgtttgatttgtaaaactgtt 26981667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 6896354 - 6896298
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||| ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  6896354 tgaaagacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 6896298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 33366796 - 33366740
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | |||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  33366796 tgaaggatatgacagaacaattctaattgtccagtgtttgatttgtaaaactgtttc 33366740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 37003795 - 37003851
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||| ||||||| ||| ||||||||||||| |||||||    
T  37003795 tgaaggacaggacataacaactcaagttgtccagtgtttgatttgtaaatctgtttc 37003851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 38992975 - 38993031
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||| ||||| ||||||| ||| ||||||||||||||| |||||    
T  38992975 tgaaggacatgacagaataactccagttgtccagtgtttgatttgtaaaacagtttc 38993031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 39461500 - 39461444
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || ||||||| | |||||||| ||| |||||||||||||||||||||    
T  39461500 tgaaggacaggatagaacaattttagttgtccagtgtttgatttgtaaaactgtttc 39461444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 44284815 - 44284759
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||  ||| |||||||||||||||||||||    
T  44284815 tgaaggacatgacagaacaactagagttgttcagtgtttgatttgtaaaactgtttc 44284759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 32766409 - 32766464
Alignment:
Q  201 gaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||  ||||||||||| || ||||| ||| |||||||||||||||||||||    
T  32766409 gaaggacagaacagaacaactataattgtccagtgtttgatttgtaaaactgtttc 32766464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 17540891 - 17540845
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||| | |||||||| ||| |||||||||||||||||||||    
T  17540891 gacagaacaattttagttgtccagtgtttgatttgtaaaactgtttc 17540845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 12939222 - 12939274
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactg 252  Q
    ||||||| ||||||||||||||  ||||||| ||| |||||||| ||||||||    
T  12939222 tgaaggataagacagaacaacttcagttgtccagtgtttgatttataaaactg 12939274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 16177787 - 16177843
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | |||| |||||||| | ||||| ||| |||||||||||||||||||||    
T  16177787 tgaaggatatgacataacaactccaattgtccagtgtttgatttgtaaaactgtttc 16177843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 32289323 - 32289379
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  32289323 tgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 32289379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 41967828 - 41967884
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  41967828 tgaaggacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttc 41967884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 844703 - 844759
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  844703 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 844759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 1351414 - 1351470
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  1351414 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 1351470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 6711025 - 6711081
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  6711025 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 6711081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 32270548 - 32270492
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  32270548 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 32270492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 35387290 - 35387346
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  35387290 tgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 35387346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 38663302 - 38663246
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  38663302 tgaaggacaagacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 38663246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 51264690 - 51264634
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  51264690 tgaaggacaagacagaataactctagttgtccagtgtttgatttgtaaaactgtttc 51264634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 15539869 - 15539925
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  15539869 tgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 15539925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 17327628 - 17327684
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||||    
T  17327628 tgaaggacaagacaaaacaactctagttgtccagtgtttaatttgtaaaactgtttc 17327684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 26118194 - 26118250
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||    
T  26118194 tgaaggacatgacataacaactctagttgtccagtgtttgatttgtaaaactgtttc 26118250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 30105659 - 30105715
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||||||||    
T  30105659 tgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 30105715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 41973106 - 41973050
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||||||||    
T  41973106 tgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 41973050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 50304846 - 50304790
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  50304846 tgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 50304790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 51703143 - 51703199
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||    
T  51703143 tgaaggacaagacagaacaactctaattgtccagtgtttgatttgtaaaattgtttc 51703199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 12890423 - 12890377
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  12890423 gacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 12890377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 28340284 - 28340338
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| || |||||||||||||||||| ||| |||||||||||||||||||||    
T  28340284 aaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 28340338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 6029283 - 6029336
Alignment:
Q  203 aggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  6029283 aggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 6029336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 8839092 - 8839036
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||| | ||||| | | |||||||||||||||||||||    
T  8839092 tgaaggacaagacagaacaactccaattgtccaatgtttgatttgtaaaactgtttc 8839036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 11772611 - 11772667
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||| ||||||| ||| |||||||||||||||||||||    
T  11772611 tgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttc 11772667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 16451322 - 16451266
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| | | |||||||||||||||||||||    
T  16451322 tgaaggacaggacataacaactctagttgtccaatgtttgatttgtaaaactgtttc 16451266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 31004327 - 31004271
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  31004327 tgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 31004271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 42510720 - 42510664
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||| ||||||||||||||| ||| ||||||| |||||||||||||    
T  42510720 tgaaggacaggacaggacaactctagttgtccagtgtttgattcgtaaaactgtttc 42510664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 44738021 - 44738077
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||||||||||||||||||| ||||| ||| ||| |||||||||||||||||    
T  44738021 tgaaagacaagacagaacaactctaattgtccagtgtttaatttgtaaaactgtttc 44738077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 45490854 - 45490910
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||| |||||||||| |||||||||| ||| |||||||||||||||||||||    
T  45490854 tgaaagacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttc 45490910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 45659016 - 45658960
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||| ||||||||||| | |||||||||||||||||||    
T  45659016 tgaaggacaggacaaaacaactccagttgtctagtgtctgatttgtaaaactgtttc 45658960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 24339619 - 24339673
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| ||||||||||||||||||||  ||| ||||||||||| |||||||||    
T  24339619 aaggacaggacagaacaactctagttgttcagtgtttgatttgtataactgtttc 24339673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 42512751 - 42512805
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  42512751 aaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 42512805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 49303339 - 49303389
Alignment:
Q  206 acaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||| |||||||||| ||||| ||| |||||||||||||||||||||    
T  49303339 acaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttc 49303389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 16387049 - 16386993
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||  |||||||||  ||| |||||||||||||||||||||    
T  16387049 tgaaggacatgacagaacagttctagttgttcagtgtttgatttgtaaaactgtttc 16386993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 16437557 - 16437501
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  | |||||||||||||||||| | | |||||||||||||||||||||    
T  16437557 tgaaggacagaatagaacaactctagttgtccaatgtttgatttgtaaaactgtttc 16437501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 17888143 - 17888087
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||| |||| ||||||||||||||||  || |||||||||||||||||||||    
T  17888143 tgaatgacatgacaaaacaactctagttgtccggtgtttgatttgtaaaactgtttc 17888087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 249
Target Start/End: Complemental strand, 10384548 - 10384513
Alignment:
Q  214 gaacaactctagttgtctagtatttgatttgtaaaa 249  Q
    ||||||||||||||||||||| ||||||||||||||    
T  10384548 gaacaactctagttgtctagtgtttgatttgtaaaa 10384513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 5109913 - 5109867
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  5109913 gacagaacaactccagttgttcagtgtttgatttgtaaaactgtttc 5109867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 13994064 - 13994110
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  13994064 gacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 13994110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 46155102 - 46155053
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaa 249  Q
    ||||||||| ||||||||||||||| ||||  ||| ||||||||||||||    
T  46155102 tgaaggacatgacagaacaactctaattgttcagtgtttgatttgtaaaa 46155053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 50540537 - 50540484
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    |||||||  ||| |||| ||||||||||| ||| ||||||||||||||||||||    
T  50540537 aaggacagaacaaaacagctctagttgtccagtgtttgatttgtaaaactgttt 50540484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 1601366 - 1601310
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||| ||| |||||||||||| |||||||  ||| ||||||||||||||| |||||    
T  1601366 tgaagaacatgacagaacaactttagttgttcagtgtttgatttgtaaaacggtttc 1601310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 6143965 - 6144021
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||  ||||||| | | ||||||||||||||| |||||    
T  6143965 tgaaggacaggacagaacaactgcagttgtccaatgtttgatttgtaaaacagtttc 6144021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 7184113 - 7184057
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||| ||||||| |||| |||||||| ||| |||||| ||||||||||||||    
T  7184113 tgaaagacaggacagaataactttagttgtccagtgtttgatatgtaaaactgtttc 7184057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 15276880 - 15276936
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  15276880 tgaaggacatgacagaacaactctagttgtctaatgtttgatttgtaaaactgtttc 15276936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 2615082 - 2615026
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||||||||||| | | |||||||||||||| ||||||    
T  2615082 tgaaggacaagacagaacaactctagttgtccactgtttgatttgtaaaattgtttc 2615026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 3259869 - 3259813
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||    
T  3259869 tgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttc 3259813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 11212443 - 11212387
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  11212443 tgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 11212387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 11382248 - 11382192
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  11382248 tgaaggacatgacagaacaactctagttgtccagtgtttaatttgtaaaactgtttc 11382192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 11613734 - 11613790
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||    
T  11613734 tgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttc 11613790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 17868021 - 17867965
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||    
T  17868021 tgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttc 17867965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 17877804 - 17877748
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||    
T  17877804 tgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttc 17877748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 34177016 - 34176960
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||||||||||||||||||||   | |||||||||||||||||||||    
T  34177016 tgaaggacaagacagaacaactctagttgtcacttgtttgatttgtaaaactgtttc 34176960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 24203548 - 24203493
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||||||||||    
T  24203548 tgaaggacatgacagaacaactatagttgtccagtgtttgatttgtaaaactgttt 24203493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 24242840 - 24242794
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  24242840 gacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 24242794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 166866 - 166922
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  166866 tgaaggatatgacagaacaactctacttgtccagtgtttgatttgtaaaactgtttc 166922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 3932750 - 3932806
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||| |||||||||  ||| |||||||||||||||||||||    
T  3932750 tgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttc 3932806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 10960186 - 10960130
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  10960186 tgaaggataggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 10960130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 32409795 - 32409851
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||| |||||||||| || ||| |||||||||||||||||||||    
T  32409795 tgaaggacatgacagaataactctagttatccagtgtttgatttgtaaaactgtttc 32409851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 11279304 - 11279258
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  11279304 gacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 11279258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 3290845 - 3290792
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgt 253  Q
    ||||||||| ||||||||||||||||||||  ||| ||||||||||| ||||||    
T  3290845 tgaaggacatgacagaacaactctagttgttcagtgtttgatttgtataactgt 3290792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 10485343 - 10485294
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaa 249  Q
    |||||||||||||| |||||||| ||||||| ||| ||||||||||||||    
T  10485343 tgaaggacaagacaaaacaactccagttgtccagtgtttgatttgtaaaa 10485294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 14807961 - 14808010
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaa 249  Q
    ||||||||| ||||||||||||| ||||||| ||| ||||||||||||||    
T  14807961 tgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaa 14808010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 3379896 - 3379840
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || ||||||||| |||||||| ||| |||||||| ||||||||||||    
T  3379896 tgaaggacatgatagaacaactttagttgtccagtgtttgatttataaaactgtttc 3379840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 10324054 - 10324110
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  |||||||||||||||||||  ||| ||| |||||||||||||||||    
T  10324054 tgaaggacagaacagaacaactctagttgttcagtgtttaatttgtaaaactgtttc 10324110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 15277223 - 15277278
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    |||| ||||||||| |||||||||| ||||| ||| |||||||||||||| |||||    
T  15277223 tgaaagacaagacaaaacaactctatttgtccagtgtttgatttgtaaaattgttt 15277278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 31870040 - 31870093
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgt 253  Q
    ||||||||  |||| |||||||| ||||||| ||| ||||||||||||||||||    
T  31870040 tgaaggactggacataacaactccagttgtccagtgtttgatttgtaaaactgt 31870093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 14925399 - 14925455
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||  ||||||  ||||||| ||| |||||||||||||||||||||    
T  14925399 tgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaaactgtttc 14925455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 32132342 - 32132378
Alignment:
Q  219 actctagttgtctagtatttgatttgtaaaactgttt 255  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  32132342 actctagttgtccagtgtttgatttgtaaaactgttt 32132378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 32860237 - 32860181
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||| | ||||| ||| ||||||||||||||| |||||    
T  32860237 tgaaggacatgacaaaacaactccaattgtccagtgtttgatttgtaaaacagtttc 32860181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 2135257 - 2135201
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  2135257 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 2135201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 20255231 - 20255175
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  20255231 tgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 20255175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 39052736 - 39052792
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  39052736 tgaaagacaagacaaaacaactctagttgtctagtgtttgatttgtaaaactgtttc 39052792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 40094690 - 40094634
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  40094690 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 40094634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 50386354 - 50386410
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  50386354 tgaaggacaggacagaacaactccagttgtctagtgtttgatttgtaaaactgtttc 50386410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 51259678 - 51259734
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  51259678 tgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 51259734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 21221261 - 21221315
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  21221261 aaggacaggacagaacaactctagttgtccaatatttgatttgtaaaactgtttc 21221315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 29585060 - 29585006
Alignment:
Q  202 aaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  29585060 aaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 29585006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 1344605 - 1344661
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  1344605 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactatttc 1344661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 3867547 - 3867603
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||| |||||||  || |||||||||||||||||||||    
T  3867547 tgaaggacaagacagaacaactccagttgtccggtgtttgatttgtaaaactgtttc 3867603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 5442466 - 5442410
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  5442466 tgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaagctgtttc 5442410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 20609546 - 20609602
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||| | | |||||||||||||||||||||    
T  20609546 tgaaggacaggacagaacaactctagttgtccaatgtttgatttgtaaaactgtttc 20609602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 24571468 - 24571412
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||    
T  24571468 tgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttc 24571412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 24721672 - 24721616
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  24721672 tgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttc 24721616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 25860319 - 25860375
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  25860319 tgaaggacttgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 25860375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 25927229 - 25927281
Alignment:
Q  204 ggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  25927229 ggacaggacagaacaactctagttgtctaatgtttgatttgtaaaactgtttc 25927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 31882920 - 31882976
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  31882920 tgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttc 31882976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 3695205 - 3695260
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||    
T  3695205 tgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgttt 3695260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 42636301 - 42636356
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||| |||||||||| |||||||||| ||| ||||||||||||||||||||    
T  42636301 tgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgttt 42636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 4851366 - 4851411
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4851366 gacagaacaactctagttgtccagtgtttgatttgtaaaactgttt 4851411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 12349069 - 12349125
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||| ||||||| ||| |||||||||||||||||||||    
T  12349069 tgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttc 12349125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 28675977 - 28675921
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||| ||| |||||||||| |||||||||| ||| |||||||||||||||||||||    
T  28675977 tgaagaacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttc 28675921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 33364676 - 33364732
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||||||||||||  ||||||| ||| ||| |||||||||||||||||    
T  33364676 tgaaggacaagacagaacaacttcagttgtccagtgttttatttgtaaaactgtttc 33364732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 34026854 - 34026798
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||||| ||||  ||| |||||||||||||||||||||    
T  34026854 tgaaggacaggacagaacaactctatttgttcagtgtttgatttgtaaaactgtttc 34026798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 43175662 - 43175606
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  |||||||||||||||||||| ||| |||||||||||||||| ||||    
T  43175662 tgaaggacagaacagaacaactctagttgtccagtgtttgatttgtaaaactatttc 43175606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 44117126 - 44117070
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||  ||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  44117126 tgaaggactggacagaacaactctagttgtccagtgtttgatttgtaaaaccgtttc 44117070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 3964475 - 3964419
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||  ||||||| ||| |||||||||||||||||||||    
T  3964475 tgaaggataggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 3964419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 38213541 - 38213485
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||| || |||||||||||||||||| ||| |||||||||||||| ||||||    
T  38213541 tgaaagacaggatagaacaactctagttgtccagtgtttgatttgtaaaattgtttc 38213485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 41682951 - 41683007
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||  ||||||| ||| |||||||||||||||||||||    
T  41682951 tgaaggacaggacaaaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 41683007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 49748809 - 49748865
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | || |||||||||| |||||| |||| |||||||||||||||||||||    
T  49748809 tgaaggataggatagaacaactcaagttgtttagtgtttgatttgtaaaactgtttc 49748865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 51925106 - 51925162
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | ||||||||||||| ||||||| ||| ||| |||||||||||||||||    
T  51925106 tgaaggataggacagaacaactccagttgtccagtgtttaatttgtaaaactgtttc 51925162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 54622695 - 54622751
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||| |||||||  |||||||  ||||||||||||||||||||||||    
T  54622695 tgaaggacatgacaaaacaacttcagttgtccggtatttgatttgtaaaactgtttc 54622751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 3864578 - 3864629
Alignment:
Q  205 gacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||||||||||| ||||||||  || |||||||||||||||||||||    
T  3864578 gacaggacagaacaactttagttgtccggtgtttgatttgtaaaactgtttc 3864629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 29646253 - 29646198
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgttt 255  Q
    |||||||||||||| ||||| || ||||||  ||| ||||||||||||||||||||    
T  29646253 tgaaggacaagacaaaacaattccagttgttcagtgtttgatttgtaaaactgttt 29646198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 47958343 - 47958386
Alignment:
Q  213 agaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||    
T  47958343 agaacaactctagttgtccagtgtttgatttgtaaaattgtttc 47958386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 21374107 - 21374061
Alignment:
Q  210 gacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||| |||||||  ||||||||||| |||||||||||||||||||||    
T  21374107 gacataacaacttcagttgtctagtgtttgatttgtaaaactgtttc 21374061  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 51296757 - 51296712
Alignment:
Q  211 acagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||| ||||| ||| ||| |||||||||||||||||    
T  51296757 acagaacaactctaattgtccagtgtttaatttgtaaaactgtttc 51296712  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 6179613 - 6179557
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || | |||||||| ||||||| ||| ||||||||||||||| |||||    
T  6179613 tgaaggacaggataaaacaactccagttgtccagtgtttgatttgtaaaacagtttc 6179557  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 22484641 - 22484697
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| | ||||| |||  |||||||||||||| |||||    
T  22484641 tgaaggacaggacagaacaactccaattgtccagtgattgatttgtaaaacagtttc 22484697  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 45690804 - 45690860
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || |||||||||  ||||||| ||| ||||||||| |||||||||||    
T  45690804 tgaaggacaggatagaacaacttcagttgtccagtgtttgatttgcaaaactgtttc 45690860  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 50678985 - 50678929
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||| |||||||| ||||| || ||||||| ||| ||||||||| |||||||||||    
T  50678985 tgaagtacaagacataacaattcaagttgtccagtgtttgatttgaaaaactgtttc 50678929  T

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Target: scaffold0957 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 2406 - 2462
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||    
T  2406 tgaaggacaagacataacaactctagttgttcagtgtttgatttgtaaaactgtttc 2462  T

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Target: scaffold0054 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 23761 - 23705
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||| || ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  23761 tgaagggcaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttc 23705  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 15358 - 15302
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||    
T  15358 tgaaggacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttc 15302  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 102135 - 102079
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| |||||||||||||||||| || ||| |||||||||||||||||||||    
T  102135 tgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaactgtttc 102079  T

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Target: scaffold0729 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 4489 - 4538
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaa 249  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  4489 tgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaa 4538  T

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Target: scaffold0280 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 13597 - 13653
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||||| ||||||    
T  13597 tgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaattgtttc 13653  T

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Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 51624 - 51568
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||| ||||||||||| || ||||| ||| |||||||||||||||||||||    
T  51624 tgaaggacaaaacagaacaactttaattgtccagtgtttgatttgtaaaactgtttc 51568  T

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Target: scaffold0650 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 1553 - 1609
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||| |||||||||||  |||| || ||| |||||||||||||||||||||    
T  1553 tgaaggacaaaacagaacaacttcagttctccagtgtttgatttgtaaaactgtttc 1609  T

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Target: scaffold0360 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 15283 - 15339
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||| ||| || |||||||||||||||||  ||| |||||||||||||||||||||    
T  15283 tgaagaacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttc 15339  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 5349 - 5405
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    |||||||||  |||||||||||  ||||||| ||| |||||||||||||||||||||    
T  5349 tgaaggacagaacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttc 5405  T

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Target: scaffold0181 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 19002 - 19056
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtt 254  Q
    ||||||||| |||||||||| | || ||||| ||| |||||||||||||||||||    
T  19002 tgaaggacaggacagaacaattatatttgtccagtgtttgatttgtaaaactgtt 19056  T

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Target: scaffold0169 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 17982 - 18020
Alignment:
Q  218 aactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  17982 aactctagttgtccagtgtttgatttgtaaaactgtttc 18020  T

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Target: scaffold0208 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 2249 - 2304
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||||| || ||||||||| ||||| || ||| |||||||||||||||||||||    
T  2249 tgaaggacaggatagaacaactttagttttc-agtgtttgatttgtaaaactgtttc 2304  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 42861 - 42916
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| ||||||||||||||| | | ||| ||| |||||||||||||||||||||    
T  42861 tgaaggataagacagaacaactcca-tagtccagtgtttgatttgtaaaactgtttc 42916  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 372874 - 372930
Alignment:
Q  200 tgaaggacaagacagaacaactctagttgtctagtatttgatttgtaaaactgtttc 256  Q
    ||||||| | |||||||||| | |||||||| | | |||||||||||||||||||||    
T  372874 tgaaggatatgacagaacaattttagttgtcaaatgtttgatttgtaaaactgtttc 372930  T

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