View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18107_high_46 (Length: 288)
Name: NF18107_high_46
Description: NF18107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18107_high_46 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 23 - 277
Target Start/End: Original strand, 48750734 - 48750987
Alignment:
| Q |
23 |
acaacaacaaaaatagtactccaacatcattgctatttgttttacatgcacaagataaattgaatcggaaccggtcttctaaattggattgtaagaacat |
122 |
Q |
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| T |
48750734 |
acaacaacaaaaatagtactccaacatcattgctatttgtttaacatgcacaagatgaatttaatcagaaccagtcttctaaattggattgtaagaacat |
48750833 |
T |
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| Q |
123 |
ttgattattatcaaccaccttgaaaaatcttcaaatttgcacacctcttccacaattttgcatacctctcccacaatctttgaatgcatgaagcataatc |
222 |
Q |
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| T |
48750834 |
t-gattattatcaaccaccttgaaaaatcttcaaatttgcatacctcttccacaattttgcatacctctcccacaatctttgaatgcatgaagcataatc |
48750932 |
T |
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| Q |
223 |
tcagattacaaacatgacacaagtcattatcggtcatggcacactgtttcttctt |
277 |
Q |
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| T |
48750933 |
tcatattacaaacataacacaagtcattatcggtcatggtacactgtttcttctt |
48750987 |
T |
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