View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18107_high_59 (Length: 243)
Name: NF18107_high_59
Description: NF18107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18107_high_59 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 4019246 - 4019031
Alignment:
| Q |
17 |
aatggctggttatgatccatgtacagaaaaatatgcagaagtttactacaataggccagatgttcaaaaagcacttcatgcaaacacaacaggcattcct |
116 |
Q |
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| T |
4019246 |
aatggctggttatgatccatgtacagaaaaatatgcagaagtttactacaataggccagatgttcaaaaagcacttcatgcaaacacaacaggcattcct |
4019147 |
T |
|
| Q |
117 |
tataagtggactgcttgcaggtgaacttttcatgacacatatattcaagttatatgagtgattatttattgtacaatttaaagattggttaataattaat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4019146 |
tataagtggactgcttgcaggtgaacttttcatgacacatatattcaagttatatgagtgattatttattgtacaatttaaagattggttaataat---- |
4019051 |
T |
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| Q |
217 |
taatcataagtttcttttca |
236 |
Q |
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|||||||||||||||||||| |
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| T |
4019050 |
taatcataagtttcttttca |
4019031 |
T |
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