View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18107_low_35 (Length: 357)
Name: NF18107_low_35
Description: NF18107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18107_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 4 - 341
Target Start/End: Original strand, 26027012 - 26027347
Alignment:
| Q |
4 |
aatatatccagaagaagtgttgcccagtaaaaccaaaatttgcttcacatctttatggattcatcaatgttgtggtataatcatgagggtttcccatcaa |
103 |
Q |
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| T |
26027012 |
aatatatccagaagaagtgttgcccagtaaaaccaaaatttgcttcacatctttatggattcatcaatgttgtggtataatcatgagggtttcccatcaa |
26027111 |
T |
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| Q |
104 |
taagctagtaaaactagtggcaccaaatgaacttaaagtggcattatcttcaccaaaagagcttacagtagcatcatcttcctgcataaacattaaagat |
203 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
26027112 |
taagctagtaaaactagtggcaccaaatga--ttaaagtggcattatcttcaccaaaagaacttacagtagcatcatcttcctgcataaacattaaagat |
26027209 |
T |
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| Q |
204 |
gtttaatcagtgaacattttttagttcattcacacactccaattgctattaggttaccataaaaggtctattgtgtacatcattgagccaaatagctcca |
303 |
Q |
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||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26027210 |
gtttaatcagtgaacatttttcagtttattcacacactccaattgctattagcttaccataaaaggtctattgtgtacatcattgagccaaatagctcca |
26027309 |
T |
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| Q |
304 |
cttgtgttagacacctcatattgcatttgtgaattacc |
341 |
Q |
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|||||||| | ||||||||||||||||||||||||||| |
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| T |
26027310 |
cttgtgttgggcacctcatattgcatttgtgaattacc |
26027347 |
T |
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